Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0008413

Physical Location & Seq

Genomic Coordinates Reverse (-)

53793035 .. 53799462

Gene Structure 6428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG311200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGGCTTCTTCGTCTCTCACATCCAAACCCTTTCTGGGTTCTGCTTCAAGGACCGAACGGCTATCTGGGTTGTGCTCCGATCTTCGAAACCTGTCCTCCCCCTCCGTTCAGTTCGTGGTCCGGCCTCGGACCGCCAAGAAGCTCCAGGTGCAGGCAGCTGGGAGTACTTTTGGGAATTACTTTCGTGTTACAACTTATGGAGAGTCTCATGGTGGTGGTGTTGGTTGTGTAATTGATGGGGTTCCTCCTCGGAGACCCATATCTGAAGCTGATTTGCAAGCAGACCTTGACAGAAGGAGGCCAGGTCAGAGCCGAATTACTACCCCTAGGAAGGAAACTGACACATGCAAAATACTTTCAGGAGTCCATGAAGGATTGACTACTGGGGCACCTATTCATGTCTTTGTACCCAATACTGATCAGAGAGGACGTGATTATGACGAAATGTCGATAGCTTATAGGCCTTCACATGCAGATCTCACATATGACTTGAAGTACGGTATCAGATCAGTGCAGGGTGGTGGTAGATCTTCAGCTAGAGAAACAATTGGAAGAGTTGCTGCAGGAGCAGTTGCGAAAAAAATCCTTAAGGACTTCTCAGGAACTGAGGTTTTTGCTTATGTTTCACAAGTCCACAAGGTCGTACTCCCAGAAGACTTGGTTGATCATTACACTCTTTCACTTGATCAGATAGAGAGTAATATGGTTAGGTGTCCAGATCCTGAATATGCAGAGAAGATGATTGCTGCTATTGATGCTGTTAGGGTGAGAGGGGAATCCATTGGTGGTGTTGTCACATGCATAATTAGAAATTGCCCGCGGGGTCTTGGTTCGCCTGTTTTTGACAAACTTGAAGCTGAACTAGCTAAAGCTTGCATGTCATTACCTGCAACAAAAGGATTTGAATTCGGAAGCGGGTTTGCAGGTACCTTTTTAACCGGGAGTGAACATAATGATGAGTTTTATGTGGATGAACAAGGACGAGTCAGGACAAGGACAAATCGCTCTGGTGGGACACAAGGAGGAATATCTAATGGGGAAATCATAAACATGAGAATAGCTTTCAAGCCAACAGCTACAATTGCTAAGAAGCAGAATACGGTGACTAGAGATAAGCATGAGACTGAACTAATAGCCCGTGGTCGCCATGATCCTTGTGTTGTCCCGCGAGCGGTTCCAATGGTGGAGGCTGGAGTGGCACTAGTGCTCGTGGATCAGTTAATGGCTCAATATGCACAATGCCATCTTTTTCCTTACAATCCGGATGTACAAGAACCTCTCTCCAAAGTGAACCCCCTTCCAACTATGTCTTTGTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004107 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009423 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010181 GO:0016053 GO:0016829 GO:0016835 GO:0016838 GO:0019438 GO:0019752 GO:0031974 GO:0031981 GO:0032553 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046417 GO:0048037 GO:0050662 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Chorismate_synt

Protein Analysis

439

Amino Acids

47.65

Weight (kDa)

8.64

Isoelectric Point (pI)

44.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Chorismate_synt	PF01264	61 - 408	5.5e-135	Chorismate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48850 AT1G48850 AT1G48850
fragaria_vesca	FvH4_7g19670 FvH4_7g19670
malus_domestica	MD01G1108900.v1.1 MD07G1175200.v1.1
prunus_persica	Prupe.2G214400_v2.0.a1 Prupe.2G214400_v2.0.a1 Prupe.2G214400_v2.0.a1
pyrus_communis	pycom07g16960
rosa_chinensis	RchiOBHm_Chr1g0363491
rosa_laevigata	RLG00000027561
rosa_multiflora	Rmu_sc0008820.1_g000005
rosa_roxburghii	Rroxscaffold_4G00293120
rosa_rugosa	Rorug01G0307400 Rorug01G0307500 Rorug01G0307600
rosa_samantha	Rh1AG316600 Rh1BG279900 Rh1CG296100 Rh1DG311200
rosa_wichuraiana	Rw1G028050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	895, 914
Acc65I	GGTACC	1 cut(s)	926
AccB1I	GGYRCC	2 cut(s)	388, 926
AccBSI	CCGCTC	1 cut(s)	1172
AccII	CGCG	2 cut(s)	820, 1168
AccIII	TCCGGA	1 cut(s)	1261
AciI	CCGC	6 cut(s)	132, 818, 820, 915, 1166, 1172
AclWI	GGATC	3 cut(s)	713, 1145, 1221
AcsI	RAATTY	1 cut(s)	905
AcuI	CTGAAG	2 cut(s)	285, 516
AfaI	GTAC	6 cut(s)	166, 408, 497, 645, 928, 1269
AfiI	CCNNNNNNNGG	4 cut(s)	35, 151, 331, 1171
AflII	CTTAAG	1 cut(s)	587
AgsI	TTSAA	5 cut(s)	48, 493, 854, 905, 1066
AhdI	GACNNNNNGTC	1 cut(s)	445
AhlI	ACTAGT	1 cut(s)	1201
AjiI	CACGTC	1 cut(s)	431
AjnI	CCWGG	2 cut(s)	144, 301
Alw21I	GWGCWC	2 cut(s)	77, 1209
Alw26I	GTCTC	4 cut(s)	18, 210, 247, 1115
AlwI	GGATC	3 cut(s)	713, 1145, 1221
AlwNI	CAGNNNCTG	2 cut(s)	605, 722
Aor13HI	TCCGGA	1 cut(s)	1261
AoxI	GGCC	3 cut(s)	122, 299, 461
ApeKI	GCWGC	3 cut(s)	155, 560, 746
ApoI	RAATTY	1 cut(s)	905
Asp718I	GGTACC	1 cut(s)	926
AspA2I	CCTAGG	1 cut(s)	326
AspS9I	GGNCC	3 cut(s)	51, 118, 129
AsuC2I	CCSGG	1 cut(s)	940
AsuHPI	GGTGA	2 cut(s)	778, 1114
AsuII	TTCGAA	1 cut(s)	85
AvaII	GGWCC	3 cut(s)	51, 118, 129
AvrII	CCTAGG	1 cut(s)	326
BaeGI	GKGCMC	1 cut(s)	391
BanI	GGYRCC	2 cut(s)	388, 926
BauI	CACGAG	1 cut(s)	1208
BbsI	GAAGAC	1 cut(s)	660
Bbv12I	GWGCWC	2 cut(s)	77, 1209
BbvI	GCAGC	3 cut(s)	167, 547, 733
BccI	CCATC	2 cut(s)	230, 1251
BceAI	ACGGC	1 cut(s)	74
BciT130I	CCWGG	2 cut(s)	146, 303
BclI	TGATCA	3 cut(s)	418, 664, 685
BcnI	CCSGG	1 cut(s)	940
BcoDI	GTCTC	4 cut(s)	18, 210, 247, 1115
BcuI	ACTAGT	1 cut(s)	1201
BfaI	CTAG	5 cut(s)	327, 537, 863, 1107, 1202
BfmI	CTRYAG	1 cut(s)	561
BfrI	CTTAAG	1 cut(s)	587
BfuAI	ACCTGC	2 cut(s)	895, 914
BglII	AGATCT	2 cut(s)	475, 527
BisI	GCNGC	3 cut(s)	156, 561, 747
BlnI	CCTAGG	1 cut(s)	326
BlsI	GCNGC	3 cut(s)	157, 562, 748
BmcAI	AGTACT	1 cut(s)	166
Bme1390I	CCNGG	3 cut(s)	146, 303, 940
Bme18I	GGWCC	3 cut(s)	51, 118, 129
BmeRI	GACNNNNNGTC	1 cut(s)	445
BmgBI	CACGTC	1 cut(s)	431
BmgT120I	GGNCC	3 cut(s)	51, 118, 129
BmiI	GGNNCC	4 cut(s)	243, 390, 928, 1176
BmrFI	CCNGG	3 cut(s)	146, 303, 940
BmrI	ACTGGG	1 cut(s)	393
BmsI	GCATC	1 cut(s)	745
BmuI	ACTGGG	1 cut(s)	393
BpiI	GAAGAC	1 cut(s)	660
BpmI	CTGGAG	2 cut(s)	128, 1212
Bpu14I	TTCGAA	1 cut(s)	85
BpuMI	CCSGG	1 cut(s)	940
BsaI	GGTCTC	1 cut(s)	247
BsaJI	CCNNGG	5 cut(s)	125, 248, 326, 818, 1138
BsaWI	WCCGGW	1 cut(s)	1261
BsaXI	ACNNNNNCTCC	4 cut(s)	80, 110, 289, 319
Bsc4I	CCNNNNNNNGG	4 cut(s)	35, 151, 331, 1171
Bse1I	ACTGG	1 cut(s)	388
BseAI	TCCGGA	1 cut(s)	1261
BseBI	CCWGG	2 cut(s)	146, 303
BseDI	CCNNGG	5 cut(s)	125, 248, 326, 818, 1138
BseGI	GGATG	3 cut(s)	20, 976, 1270
BseLI	CCNNNNNNNGG	4 cut(s)	35, 151, 331, 1171
BseMII	CTCAG	2 cut(s)	597, 612
BseNI	ACTGG	1 cut(s)	388
BseRI	GAGGAG	1 cut(s)	237
BseSI	GKGCMC	1 cut(s)	391
BseXI	GCAGC	3 cut(s)	167, 547, 733
BseYI	CCCAGC	1 cut(s)	158
BsgI	GTGCAG	2 cut(s)	170, 533
Bsh1236I	CGCG	2 cut(s)	820, 1168
BshFI	GGCC	3 cut(s)	124, 301, 463
BshNI	GGYRCC	2 cut(s)	388, 926
BsiHKAI	GWGCWC	2 cut(s)	77, 1209
BsiSI	CCGG	3 cut(s)	121, 939, 1262
BslFI	GGGAC	2 cut(s)	1027, 1148
BslI	CCNNNNNNNGG	4 cut(s)	35, 151, 331, 1171
BsmAI	GTCTC	4 cut(s)	18, 210, 247, 1115
BsmBI	CGTCTC	1 cut(s)	18
BsmFI	GGGAC	2 cut(s)	1027, 1148
BsnI	GGCC	3 cut(s)	124, 301, 463
Bso31I	GGTCTC	1 cut(s)	247
Bsp119I	TTCGAA	1 cut(s)	85
Bsp1286I	GDGCHC	3 cut(s)	77, 391, 1209
Bsp13I	TCCGGA	1 cut(s)	1261
Bsp1407I	TGTACA	1 cut(s)	1267
BspACI	CCGC	6 cut(s)	132, 818, 820, 915, 1166, 1172
BspANI	GGCC	3 cut(s)	124, 301, 463
BspCNI	CTCAG	2 cut(s)	598, 611
BspEI	TCCGGA	1 cut(s)	1261
BspFNI	CGCG	2 cut(s)	820, 1168
BspLI	GGNNCC	4 cut(s)	243, 390, 928, 1176
BspMAI	CTGCAG	1 cut(s)	565
BspMI	ACCTGC	2 cut(s)	895, 914
BspPI	GGATC	3 cut(s)	713, 1145, 1221
BspT104I	TTCGAA	1 cut(s)	85
BspT107I	GGYRCC	2 cut(s)	388, 926
BspTI	CTTAAG	1 cut(s)	587
BspTNI	GGTCTC	1 cut(s)	247
BsrBI	CCGCTC	1 cut(s)	1172
BsrGI	TGTACA	1 cut(s)	1267
BsrI	ACTGG	1 cut(s)	388
BssECI	CCNNGG	5 cut(s)	125, 248, 326, 818, 1138
BssSI	CACGAG	1 cut(s)	1208
BssT1I	CCWWGG	1 cut(s)	326
Bst2BI	CACGAG	1 cut(s)	1208
Bst2UI	CCWGG	2 cut(s)	146, 303
Bst4CI	ACNGT	2 cut(s)	500, 1102
Bst6I	CTCTTC	1 cut(s)	547
BstAFI	CTTAAG	1 cut(s)	587
BstAUI	TGTACA	1 cut(s)	1267
BstBI	TTCGAA	1 cut(s)	85
BstC8I	GCNNGC	5 cut(s)	153, 279, 818, 874, 1170
BstDEI	CTNAG	3 cut(s)	598, 606, 1086
BstDSI	CCRYGG	2 cut(s)	818, 1138
BstF5I	GGATG	3 cut(s)	20, 976, 1270
BstFNI	CGCG	2 cut(s)	820, 1168
BstMAI	GTCTC	4 cut(s)	18, 210, 247, 1115
BstMWI	GCNNNNNNNGC	7 cut(s)	148, 566, 755, 863, 1082, 1196, 1232
BstNI	CCWGG	2 cut(s)	146, 303
BstNSI	RCATGY	4 cut(s)	348, 473, 801, 880
BstSCI	CCNGG	3 cut(s)	144, 301, 938
BstSFI	CTRYAG	1 cut(s)	561
BstSLI	GKGCMC	1 cut(s)	391
BstUI	CGCG	2 cut(s)	820, 1168
BstV1I	GCAGC	3 cut(s)	167, 547, 733
BstV2I	GAAGAC	1 cut(s)	660
BstX2I	RGATCY	3 cut(s)	475, 527, 718
BstYI	RGATCY	3 cut(s)	475, 527, 718
BsuRI	GGCC	3 cut(s)	124, 301, 463
BtgI	CCRYGG	2 cut(s)	818, 1138
BtrI	CACGTC	1 cut(s)	431
BtsCI	GGATG	3 cut(s)	20, 976, 1270
BtsIMutI	CAGTG	1 cut(s)	516
BveI	ACCTGC	2 cut(s)	895, 914
Cac8I	GCNNGC	5 cut(s)	153, 279, 818, 874, 1170
CaiI	CAGNNNCTG	2 cut(s)	605, 722
Cfr13I	GGNCC	3 cut(s)	51, 118, 129
Cfr42I	CCGCGG	1 cut(s)	821
CpoI	CGGWCCG	1 cut(s)	129
Csp6I	GTAC	6 cut(s)	165, 407, 496, 644, 927, 1268
CspI	CGGWCCG	1 cut(s)	129
CviQI	GTAC	6 cut(s)	165, 407, 496, 644, 927, 1268
DdeI	CTNAG	3 cut(s)	598, 606, 1086
DriI	GACNNNNNGTC	1 cut(s)	445
Eam1104I	CTCTTC	1 cut(s)	547
Eam1105I	GACNNNNNGTC	1 cut(s)	445
EarI	CTCTTC	1 cut(s)	547
Eco130I	CCWWGG	1 cut(s)	326
Eco147I	AGGCCT	1 cut(s)	463
Eco31I	GGTCTC	1 cut(s)	247
Eco47I	GGWCC	3 cut(s)	51, 118, 129
Eco57I	CTGAAG	2 cut(s)	285, 516
EcoRI	GAATTC	1 cut(s)	905
EcoRII	CCWGG	2 cut(s)	144, 301
EcoT14I	CCWWGG	1 cut(s)	326
EcoT22I	ATGCAT	1 cut(s)	803
ErhI	CCWWGG	1 cut(s)	326
Esp3I	CGTCTC	1 cut(s)	18
FalI	AAGNNNNNCTT	2 cut(s)	270, 302
FaqI	GGGAC	2 cut(s)	1027, 1148
FauI	CCCGC	4 cut(s)	813, 825, 908, 1173
FauNDI	CATATG	1 cut(s)	484
FbaI	TGATCA	3 cut(s)	418, 664, 685
Fnu4HI	GCNGC	3 cut(s)	156, 561, 747
FokI	GGATG	3 cut(s)	7, 983, 1277
Fsp4HI	GCNGC	3 cut(s)	156, 561, 747
FspBI	CTAG	5 cut(s)	327, 537, 863, 1107, 1202
GluI	GCNGC	3 cut(s)	156, 561, 747
GsaI	CCCAGC	1 cut(s)	162
GsuI	CTGGAG	2 cut(s)	128, 1212
HaeIII	GGCC	3 cut(s)	124, 301, 463
HapII	CCGG	3 cut(s)	121, 939, 1262
HindIII	AAGCTT	1 cut(s)	870
HinfI	GANTC	4 cut(s)	203, 363, 776, 984
HpaII	CCGG	3 cut(s)	121, 939, 1262
HphI	GGTGA	2 cut(s)	778, 1114
Hpy166II	GTNNAC	3 cut(s)	634, 947, 1291
Hpy188I	TCNGA	9 cut(s)	79, 129, 252, 265, 309, 423, 506, 690, 911
Hpy188III	TCNNGA	6 cut(s)	360, 600, 716, 722, 988, 1262
Hpy8I	GTNNAC	3 cut(s)	634, 947, 1291
HpyAV	CCTTC	5 cut(s)	288, 325, 365, 474, 1307
HpyCH4III	ACNGT	2 cut(s)	500, 1102
HpyCH4IV	ACGT	1 cut(s)	430
HpyF10VI	GCNNNNNNNGC	7 cut(s)	148, 566, 755, 863, 1082, 1196, 1232
HpyF3I	CTNAG	3 cut(s)	598, 606, 1086
HpySE526I	ACGT	1 cut(s)	430
Kpn2I	TCCGGA	1 cut(s)	1261
KpnI	GGTACC	1 cut(s)	930
Ksp22I	TGATCA	3 cut(s)	418, 664, 685
KspI	CCGCGG	1 cut(s)	821
LmnI	GCTCC	3 cut(s)	80, 147, 566
Lsp1109I	GCAGC	3 cut(s)	167, 547, 733
LweI	GCATC	1 cut(s)	745
MaeI	CTAG	5 cut(s)	327, 537, 863, 1107, 1202
MaeII	ACGT	1 cut(s)	430
MaeIII	GTNAC	3 cut(s)	187, 793, 1102
MbiI	CCGCTC	1 cut(s)	1172
MboII	GAAGA	5 cut(s)	74, 522, 564, 665, 748
MfeI	CAATTG	2 cut(s)	546, 1080
MflI	RGATCY	3 cut(s)	475, 527, 718
MhlI	GDGCHC	3 cut(s)	77, 391, 1209
MluCI	AATT	8 cut(s)	175, 231, 315, 546, 804, 811, 905, 1080
MlyI	GAGTC	3 cut(s)	212, 372, 993
Mph1103I	ATGCAT	1 cut(s)	803
MroI	TCCGGA	1 cut(s)	1261
MseI	TTAA	3 cut(s)	588, 935, 1220
MslI	CAYNNNNRTG	3 cut(s)	213, 954, 1049
MspA1I	CMGCKG	2 cut(s)	158, 820
MspCI	CTTAAG	1 cut(s)	587
MspI	CCGG	3 cut(s)	121, 939, 1262
MspR9I	CCNGG	3 cut(s)	146, 303, 940
MunI	CAATTG	2 cut(s)	546, 1080
MvaI	CCWGG	2 cut(s)	146, 303
MvnI	CGCG	2 cut(s)	820, 1168
MwoI	GCNNNNNNNGC	7 cut(s)	148, 566, 755, 863, 1082, 1196, 1232
NciI	CCSGG	1 cut(s)	940
NdeI	CATATG	1 cut(s)	484
NlaIV	GGNNCC	4 cut(s)	243, 390, 928, 1176
NmuCI	GTSAC	2 cut(s)	793, 1102
NsiI	ATGCAT	1 cut(s)	803
NspI	RCATGY	4 cut(s)	348, 473, 801, 880
NspV	TTCGAA	1 cut(s)	85
PceI	AGGCCT	1 cut(s)	463
PfeI	GAWTC	1 cut(s)	776
PkrI	GCNGC	3 cut(s)	157, 562, 748
PleI	GAGTC	3 cut(s)	211, 371, 992
PpsI	GAGTC	3 cut(s)	211, 371, 992
Psp6I	CCWGG	2 cut(s)	144, 301
PspFI	CCCAGC	1 cut(s)	158
PspGI	CCWGG	2 cut(s)	144, 301
PspN4I	GGNNCC	4 cut(s)	243, 390, 928, 1176
PspPI	GGNCC	3 cut(s)	51, 118, 129
PstI	CTGCAG	1 cut(s)	565
PstNI	CAGNNNCTG	2 cut(s)	605, 722
PsuI	RGATCY	3 cut(s)	475, 527, 718
PvuII	CAGCTG	1 cut(s)	158
RsaI	GTAC	6 cut(s)	166, 408, 497, 645, 928, 1269
RsaNI	GTAC	6 cut(s)	165, 407, 496, 644, 927, 1268
RseI	CAYNNNNRTG	3 cut(s)	213, 954, 1049
Rsr2I	CGGWCCG	1 cut(s)	129
RsrII	CGGWCCG	1 cut(s)	129
SacII	CCGCGG	1 cut(s)	821
SaqAI	TTAA	3 cut(s)	588, 935, 1220
SatI	GCNGC	3 cut(s)	156, 561, 747
Sau96I	GGNCC	3 cut(s)	51, 118, 129
ScaI	AGTACT	1 cut(s)	166
SchI	GAGTC	3 cut(s)	212, 372, 993
ScrFI	CCNGG	3 cut(s)	146, 303, 940
SduI	GDGCHC	3 cut(s)	77, 391, 1209
SfaNI	GCATC	1 cut(s)	745
SfcI	CTRYAG	1 cut(s)	561
Sfr303I	CCGCGG	1 cut(s)	821
SfuI	TTCGAA	1 cut(s)	85
SgrBI	CCGCGG	1 cut(s)	821
SinI	GGWCC	3 cut(s)	51, 118, 129
SmiMI	CAYNNNNRTG	3 cut(s)	213, 954, 1049
SmlI	CTYRAG	1 cut(s)	587
SmoI	CTYRAG	1 cut(s)	587
SpeI	ACTAGT	1 cut(s)	1201
Sse9I	AATT	8 cut(s)	175, 231, 315, 546, 804, 811, 905, 1080
SseBI	AGGCCT	1 cut(s)	463
SsiI	CCGC	6 cut(s)	132, 818, 820, 915, 1166, 1172
SspMI	CTAG	5 cut(s)	327, 537, 863, 1107, 1202
StuI	AGGCCT	1 cut(s)	463
StyD4I	CCNGG	3 cut(s)	144, 301, 938
StyI	CCWWGG	1 cut(s)	326
TaaI	ACNGT	2 cut(s)	500, 1102
TaiI	ACGT	1 cut(s)	433
TaqI	TCGA	2 cut(s)	85, 449
TaqII	GACCGA	1 cut(s)	68
TasI	AATT	8 cut(s)	175, 231, 315, 546, 804, 811, 905, 1080
TatI	WGTACW	2 cut(s)	164, 1267
TfiI	GAWTC	1 cut(s)	776
Tru1I	TTAA	3 cut(s)	588, 935, 1220
Tru9I	TTAA	3 cut(s)	588, 935, 1220
TscAI	CASTG	1 cut(s)	516
TseFI	GTSAC	2 cut(s)	793, 1102
TseI	GCWGC	3 cut(s)	155, 560, 746
Tsp45I	GTSAC	2 cut(s)	793, 1102
TspDTI	ATGAA	3 cut(s)	384, 386, 987
TspGWI	ACGGA	1 cut(s)	94
TspRI	CASTG	1 cut(s)	516
Vha464I	CTTAAG	1 cut(s)	587
VpaK11BI	GGWCC	3 cut(s)	51, 118, 129
XapI	RAATTY	1 cut(s)	905
XceI	RCATGY	4 cut(s)	348, 473, 801, 880
XcmI	CCANNNNNNNNNTGG	1 cut(s)	31
XmaJI	CCTAGG	1 cut(s)	326
XspI	CTAG	5 cut(s)	327, 537, 863, 1107, 1202
ZrmI	AGTACT	1 cut(s)	166
Zsp2I	ATGCAT	1 cut(s)	803

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.