Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0008413

Physical Location & Seq

Genomic Coordinates Reverse (-)

19485188 .. 19490544

Gene Structure 5357 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g16960.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1368 bp

ATGGCTTCCTCTCTTGCATCCAAGCCATTCCTCGGAGGAGCTTCAAGGACCGATGGCTTTTCTGGGTTGTGCTCCTCCTCCTCTGATCTCCGAACCCTCTCGTCCTCCTCCGTTCAATTTGTGATCCGCCCGAGAACCCCCAACAAACTCCAGGTGCAGGCAGCTGGGAACACTACCGGAAATCATTTTCGTGTTACAACTTTTGGAGAATCTCATGGTGGTGGTGTTGGTTGTGTAATTGATGGATGCCCTCCTCGTATGCCCCTCTCTGCAGAAGATTTGCAAGGGGACCTTGACAGAAGGAGGCCAGGTCAGAGTCGAATTACTACTCCTAGGAAGGAAACTGACACATGCCGAATACTTTCGGGAGTTCATGAAGGAGTGACAACTGGGACACCAATTCTTGTGCTTGTACCCAATACTGATCAGAGAGGACGTGATTATGATGAAATGTCAGTAGCATATAGGCCTTCACATGCAGATCGAACTTATGACCAGAAGTATGGAATCAGATCAGTGCAGGGCGGTGGTAGATCTTCTGCTAGAGAAACAATTGGAAGAGTTGCTGCTGGAGCCCTTGCCAAGAAAATCCTTAAGGCTTTCTCAGGAACTGAGGTCCTTGCTTATGTTTCACAAGTTCAGAAGGTTGTGCTTCCCGTGGAGTTGGTTGATCATCACAATTTGACACTTGATCAGATAGAGAGTAATATTGTTAGGTGCCCAGATCCTGAATATGCAGAGAAGATGATTGCTGCCATTGATGCTGTTAGGGTGAAAGGGCAATCTATTGGTGGTGTTGTCACATGCATTGTTAAAAATTGCCCACCCGGGCTTGGTTCACCAGTCTTTGATAAACTTGAAGCTGAATTTGCTAAAGCTGTAATGTCATTACCTGCAACAAAGGGATTTGAAATTGGAAGTGGATTTGCAGGTACCTTTTTAACTGGGAGTGAACATAATGATGAATTCTATTTAGATGATCAAGGAAAAATCAGGACAAGAACAAACCGCTCTGGTGGGACACAGGGAGGACTATCCAATGGGGAAATTATAAACATGAGAATAGCCTTCAAGCCAACAGCTACTATTGGAAAGAAGCAGAATACAGTGACTAGAGATAAAAAAGAGATGGAACTAATAGCCCGTGGTCGCCATGATCCCTGTGTTGTTCCGCGAGCTGTGCCGATGGTGGAAGCTGCAATAGCCCTTGTGCTGGTGGACCAACTAATGGCAGATTTTGCACAGTGTCACATGTTTCCTATCAATCCCGACCTACAAGACCCTGTGCCACAGCCAATGGTTGACCTACAAGACCCTGTGCCGCCGCCAATGGTTGAAGCAGCGGAGGCAGCTGGTGTGCACATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004107 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009423 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010181 GO:0016053 GO:0016829 GO:0016835 GO:0016838 GO:0019438 GO:0019752 GO:0031974 GO:0031981 GO:0032553 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046417 GO:0048037 GO:0050662 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Chorismate_synt

Protein Analysis

456

Amino Acids

48.76

Weight (kDa)

7.13

Isoelectric Point (pI)

43.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48850 AT1G48850 AT1G48850
fragaria_vesca	FvH4_7g19670 FvH4_7g19670
malus_domestica	MD01G1108900.v1.1 MD07G1175200.v1.1
prunus_persica	Prupe.2G214400_v2.0.a1 Prupe.2G214400_v2.0.a1 Prupe.2G214400_v2.0.a1
pyrus_communis	pycom07g16960
rosa_chinensis	RchiOBHm_Chr1g0363491
rosa_laevigata	RLG00000027561
rosa_multiflora	Rmu_sc0008820.1_g000005
rosa_roxburghii	Rroxscaffold_4G00293120
rosa_rugosa	Rorug01G0307400 Rorug01G0307500 Rorug01G0307600
rosa_samantha	Rh1AG316600 Rh1BG279900 Rh1CG296100 Rh1DG311200
rosa_wichuraiana	Rw1G028050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1052
Acc36I	ACCTGC	2 cut(s)	901, 920
Acc65I	GGTACC	1 cut(s)	932
AccB1I	GGYRCC	2 cut(s)	717, 932
AccB7I	CCANNNNNTGG	1 cut(s)	1228
AccBSI	CCGCTC	1 cut(s)	1011
AccII	CGCG	1 cut(s)	1174
AciI	CCGC	7 cut(s)	127, 525, 1009, 1172, 1322, 1325, 1343
AclWI	GGATC	3 cut(s)	118, 719, 1151
AcsI	RAATTY	2 cut(s)	866, 965
AfaI	GTAC	2 cut(s)	414, 934
AfiI	CCNNNNNNNGG	5 cut(s)	32, 157, 833, 1213, 1228
AflII	CTTAAG	1 cut(s)	593
AflIII	ACRYGT	1 cut(s)	1251
AgsI	TTSAA	6 cut(s)	45, 116, 860, 911, 1072, 1337
AjiI	CACGTC	1 cut(s)	437
AjnI	CCWGG	2 cut(s)	150, 307
AluBI	AGCT	8 cut(s)	41, 164, 863, 878, 1082, 1178, 1196, 1352
AluI	AGCT	8 cut(s)	41, 164, 863, 878, 1082, 1178, 1196, 1352
Alw21I	GWGCWC	2 cut(s)	74, 1362
Alw44I	GTGCAC	1 cut(s)	1358
AlwI	GGATC	3 cut(s)	118, 719, 1151
AlwNI	CAGNNNCTG	2 cut(s)	611, 728
Ama87I	CYCGRG	2 cut(s)	130, 827
AoxI	GGCC	2 cut(s)	305, 467
ApaLI	GTGCAC	1 cut(s)	1358
ApeKI	GCWGC	6 cut(s)	161, 566, 752, 1196, 1340, 1349
ApoI	RAATTY	2 cut(s)	866, 965
Asp700I	GAANNNNTTC	1 cut(s)	361
Asp718I	GGTACC	1 cut(s)	932
AspA2I	CCTAGG	1 cut(s)	332
AspS9I	GGNCC	4 cut(s)	48, 289, 616, 1219
AsuC2I	CCSGG	2 cut(s)	828, 829
AsuHPI	GGTGA	2 cut(s)	784, 831
AvaI	CYCGRG	2 cut(s)	130, 827
AvaII	GGWCC	4 cut(s)	48, 289, 616, 1219
AvrII	CCTAGG	1 cut(s)	332
BaeGI	GKGCMC	2 cut(s)	722, 1362
BanI	GGYRCC	2 cut(s)	717, 932
BanII	GRGCYC	1 cut(s)	577
Bbv12I	GWGCWC	2 cut(s)	74, 1362
BbvI	GCAGC	6 cut(s)	173, 553, 739, 1183, 1352, 1361
BccI	CCATC	4 cut(s)	47, 236, 1123, 1180
BciT130I	CCWGG	2 cut(s)	152, 309
BclI	TGATCA	4 cut(s)	424, 670, 691, 979
BcnI	CCSGG	2 cut(s)	828, 829
BfaI	CTAG	3 cut(s)	333, 543, 1113
BfmI	CTRYAG	1 cut(s)	270
BfrI	CTTAAG	1 cut(s)	593
BfuAI	ACCTGC	2 cut(s)	901, 920
BglII	AGATCT	1 cut(s)	533
BisI	GCNGC	8 cut(s)	162, 567, 753, 1197, 1322, 1325, 1341, 1350
BlnI	CCTAGG	1 cut(s)	332
BlsI	GCNGC	8 cut(s)	163, 568, 754, 1198, 1323, 1326, 1342, 1351
Bme1390I	CCNGG	4 cut(s)	152, 309, 828, 829
Bme18I	GGWCC	4 cut(s)	48, 289, 616, 1219
BmeT110I	CYCGRG	2 cut(s)	130, 827
BmgBI	CACGTC	1 cut(s)	437
BmgT120I	GGNCC	4 cut(s)	48, 289, 616, 1219
BmiI	GGNNCC	4 cut(s)	290, 574, 719, 934
BmrFI	CCNGG	4 cut(s)	152, 309, 828, 829
BmrI	ACTGGG	2 cut(s)	399, 954
BmsI	GCATC	3 cut(s)	26, 236, 751
BmuI	ACTGGG	2 cut(s)	399, 954
BpmI	CTGGAG	2 cut(s)	134, 591
BpuMI	CCSGG	2 cut(s)	828, 829
BsaJI	CCNNGG	5 cut(s)	31, 332, 657, 827, 1144
BsaWI	WCCGGW	1 cut(s)	176
BsaXI	ACNNNNNCTCC	2 cut(s)	295, 325
Bsc4I	CCNNNNNNNGG	5 cut(s)	32, 157, 833, 1213, 1228
Bse1I	ACTGG	3 cut(s)	394, 842, 949
BseBI	CCWGG	2 cut(s)	152, 309
BseDI	CCNNGG	5 cut(s)	31, 332, 657, 827, 1144
BseGI	GGATG	2 cut(s)	17, 251
BseLI	CCNNNNNNNGG	5 cut(s)	32, 157, 833, 1213, 1228
BseMII	CTCAG	2 cut(s)	603, 618
BseNI	ACTGG	3 cut(s)	394, 842, 949
BseRI	GAGGAG	6 cut(s)	51, 64, 67, 70, 97, 243
BseSI	GKGCMC	2 cut(s)	722, 1362
BseXI	GCAGC	6 cut(s)	173, 553, 739, 1183, 1352, 1361
BseYI	CCCAGC	1 cut(s)	164
BsgI	GTGCAG	2 cut(s)	176, 539
Bsh1236I	CGCG	1 cut(s)	1174
BshFI	GGCC	2 cut(s)	307, 469
BshNI	GGYRCC	2 cut(s)	717, 932
BsiHKAI	GWGCWC	2 cut(s)	74, 1362
BsiHKCI	CYCGRG	2 cut(s)	130, 827
BsiSI	CCGG	2 cut(s)	177, 828
BslFI	GGGAC	3 cut(s)	302, 406, 1033
BslI	CCNNNNNNNGG	5 cut(s)	32, 157, 833, 1213, 1228
BsmFI	GGGAC	3 cut(s)	302, 406, 1033
BsnI	GGCC	2 cut(s)	307, 469
BsoBI	CYCGRG	2 cut(s)	130, 827
Bsp1286I	GDGCHC	4 cut(s)	74, 577, 722, 1362
BspACI	CCGC	7 cut(s)	127, 525, 1009, 1172, 1322, 1325, 1343
BspANI	GGCC	2 cut(s)	307, 469
BspCNI	CTCAG	2 cut(s)	604, 617
BspFNI	CGCG	1 cut(s)	1174
BspHI	TCATGA	1 cut(s)	373
BspLI	GGNNCC	4 cut(s)	290, 574, 719, 934
BspMAI	CTGCAG	1 cut(s)	274
BspMI	ACCTGC	2 cut(s)	901, 920
BspPI	GGATC	3 cut(s)	118, 719, 1151
BspT107I	GGYRCC	2 cut(s)	717, 932
BspTI	CTTAAG	1 cut(s)	593
BsrBI	CCGCTC	1 cut(s)	1011
BsrI	ACTGG	3 cut(s)	394, 842, 949
BssECI	CCNNGG	5 cut(s)	31, 332, 657, 827, 1144
BssT1I	CCWWGG	1 cut(s)	332
Bst2UI	CCWGG	2 cut(s)	152, 309
Bst4CI	ACNGT	2 cut(s)	1108, 1245
Bst6I	CTCTTC	1 cut(s)	553
BstAFI	CTTAAG	1 cut(s)	593
BstAPI	GCANNNNNTGC	1 cut(s)	1238
BstC8I	GCNNGC	2 cut(s)	159, 1176
BstDEI	CTNAG	2 cut(s)	604, 612
BstDSI	CCRYGG	2 cut(s)	657, 1144
BstF5I	GGATG	2 cut(s)	17, 251
BstFNI	CGCG	1 cut(s)	1174
BstMWI	GCNNNNNNNGC	8 cut(s)	572, 761, 869, 1180, 1202, 1238, 1346, 1349
BstNI	CCWGG	2 cut(s)	152, 309
BstNSI	RCATGY	4 cut(s)	354, 479, 807, 1255
BstSCI	CCNGG	4 cut(s)	150, 307, 826, 827
BstSFI	CTRYAG	1 cut(s)	270
BstSLI	GKGCMC	2 cut(s)	722, 1362
BstUI	CGCG	1 cut(s)	1174
BstV1I	GCAGC	6 cut(s)	173, 553, 739, 1183, 1352, 1361
BstX2I	RGATCY	2 cut(s)	533, 724
BstXI	CCANNNNNNTGG	1 cut(s)	503
BstYI	RGATCY	2 cut(s)	533, 724
BsuRI	GGCC	2 cut(s)	307, 469
BtgI	CCRYGG	2 cut(s)	657, 1144
BtrI	CACGTC	1 cut(s)	437
BtsCI	GGATG	2 cut(s)	17, 251
BtsIMutI	CAGTG	3 cut(s)	522, 1113, 1250
BveI	ACCTGC	2 cut(s)	901, 920
Cac8I	GCNNGC	2 cut(s)	159, 1176
CaiI	CAGNNNCTG	2 cut(s)	611, 728
CciI	TCATGA	1 cut(s)	373
Cfr13I	GGNCC	4 cut(s)	48, 289, 616, 1219
Cfr9I	CCCGGG	1 cut(s)	827
Csp6I	GTAC	2 cut(s)	413, 933
CviAII	CATG	8 cut(s)	215, 351, 374, 476, 804, 1057, 1154, 1252
CviQI	GTAC	2 cut(s)	413, 933
DdeI	CTNAG	2 cut(s)	604, 612
Eam1104I	CTCTTC	1 cut(s)	553
EarI	CTCTTC	1 cut(s)	553
EciI	GGCGGA	1 cut(s)	116
Eco130I	CCWWGG	1 cut(s)	332
Eco147I	AGGCCT	1 cut(s)	469
Eco24I	GRGCYC	1 cut(s)	577
Eco47I	GGWCC	4 cut(s)	48, 289, 616, 1219
Eco88I	CYCGRG	2 cut(s)	130, 827
EcoO109I	RGGNCCY	2 cut(s)	289, 616
EcoRI	GAATTC	1 cut(s)	965
EcoRII	CCWGG	2 cut(s)	150, 307
EcoT14I	CCWWGG	1 cut(s)	332
EcoT22I	ATGCAT	1 cut(s)	809
EcoT38I	GRGCYC	1 cut(s)	577
ErhI	CCWWGG	1 cut(s)	332
FaeI	CATG	8 cut(s)	218, 354, 377, 479, 807, 1060, 1157, 1255
FalI	AAGNNNNNCTT	2 cut(s)	276, 308
FaqI	GGGAC	3 cut(s)	302, 406, 1033
FatI	CATG	8 cut(s)	214, 350, 373, 475, 803, 1056, 1153, 1251
FbaI	TGATCA	4 cut(s)	424, 670, 691, 979
Fnu4HI	GCNGC	8 cut(s)	162, 567, 753, 1197, 1322, 1325, 1341, 1350
FokI	GGATG	2 cut(s)	4, 258
FriOI	GRGCYC	1 cut(s)	577
Fsp4HI	GCNGC	8 cut(s)	162, 567, 753, 1197, 1322, 1325, 1341, 1350
FspBI	CTAG	3 cut(s)	333, 543, 1113
GluI	GCNGC	8 cut(s)	162, 567, 753, 1197, 1322, 1325, 1341, 1350
GsaI	CCCAGC	1 cut(s)	168
GsuI	CTGGAG	2 cut(s)	134, 591
HaeIII	GGCC	2 cut(s)	307, 469
HapII	CCGG	2 cut(s)	177, 828
Hin1II	CATG	8 cut(s)	218, 354, 377, 479, 807, 1060, 1157, 1255
HincII	GTYRAC	1 cut(s)	1303
HindII	GTYRAC	1 cut(s)	1303
HinfI	GANTC	3 cut(s)	209, 316, 507
HpaII	CCGG	2 cut(s)	177, 828
HphI	GGTGA	2 cut(s)	784, 831
Hpy166II	GTNNAC	5 cut(s)	839, 953, 1219, 1303, 1360
Hpy188I	TCNGA	8 cut(s)	35, 85, 92, 315, 429, 512, 642, 696
Hpy188III	TCNNGA	6 cut(s)	366, 374, 606, 728, 994, 1268
Hpy8I	GTNNAC	5 cut(s)	839, 953, 1219, 1303, 1360
HpyAV	CCTTC	6 cut(s)	294, 331, 371, 480, 637, 1078
HpyCH4III	ACNGT	2 cut(s)	1108, 1245
HpyCH4IV	ACGT	1 cut(s)	436
HpyF10VI	GCNNNNNNNGC	8 cut(s)	572, 761, 869, 1180, 1202, 1238, 1346, 1349
HpyF3I	CTNAG	2 cut(s)	604, 612
HpySE526I	ACGT	1 cut(s)	436
Hsp92II	CATG	8 cut(s)	218, 354, 377, 479, 807, 1060, 1157, 1255
KpnI	GGTACC	1 cut(s)	936
Ksp22I	TGATCA	4 cut(s)	424, 670, 691, 979
LmnI	GCTCC	3 cut(s)	38, 77, 572
Lsp1109I	GCAGC	6 cut(s)	173, 553, 739, 1183, 1352, 1361
LweI	GCATC	3 cut(s)	26, 236, 751
MaeI	CTAG	3 cut(s)	333, 543, 1113
MaeII	ACGT	1 cut(s)	436
MaeIII	GTNAC	5 cut(s)	193, 382, 799, 1108, 1247
MbiI	CCGCTC	1 cut(s)	1011
MboII	GAAGA	4 cut(s)	287, 528, 570, 754
MfeI	CAATTG	1 cut(s)	552
MflI	RGATCY	2 cut(s)	533, 724
MhlI	GDGCHC	4 cut(s)	74, 577, 722, 1362
MlyI	GAGTC	1 cut(s)	325
Mph1103I	ATGCAT	1 cut(s)	809
MroXI	GAANNNNTTC	1 cut(s)	361
MseI	TTAA	3 cut(s)	594, 813, 941
MslI	CAYNNNNRTG	3 cut(s)	189, 219, 960
MspA1I	CMGCKG	3 cut(s)	164, 1343, 1352
MspCI	CTTAAG	1 cut(s)	593
MspI	CCGG	2 cut(s)	177, 828
MspR9I	CCNGG	4 cut(s)	152, 309, 828, 829
MunI	CAATTG	1 cut(s)	552
MvaI	CCWGG	2 cut(s)	152, 309
MvnI	CGCG	1 cut(s)	1174
MwoI	GCNNNNNNNGC	8 cut(s)	572, 761, 869, 1180, 1202, 1238, 1346, 1349
NciI	CCSGG	2 cut(s)	828, 829
NlaIII	CATG	8 cut(s)	218, 354, 377, 479, 807, 1060, 1157, 1255
NlaIV	GGNNCC	4 cut(s)	290, 574, 719, 934
NmuCI	GTSAC	4 cut(s)	382, 799, 1108, 1247
NsiI	ATGCAT	1 cut(s)	809
NspI	RCATGY	4 cut(s)	354, 479, 807, 1255
PagI	TCATGA	1 cut(s)	373
PceI	AGGCCT	1 cut(s)	469
PciI	ACATGT	1 cut(s)	1251
PdmI	GAANNNNTTC	1 cut(s)	361
PfeI	GAWTC	2 cut(s)	209, 507
PflMI	CCANNNNNTGG	1 cut(s)	1228
PkrI	GCNGC	8 cut(s)	163, 568, 754, 1198, 1323, 1326, 1342, 1351
PleI	GAGTC	1 cut(s)	324
PpsI	GAGTC	1 cut(s)	324
PpuMI	RGGWCCY	2 cut(s)	289, 616
PscI	ACATGT	1 cut(s)	1251
PsiI	TTATAA	1 cut(s)	1052
Psp5II	RGGWCCY	2 cut(s)	289, 616
Psp6I	CCWGG	2 cut(s)	150, 307
PspFI	CCCAGC	1 cut(s)	164
PspGI	CCWGG	2 cut(s)	150, 307
PspN4I	GGNNCC	4 cut(s)	290, 574, 719, 934
PspPI	GGNCC	4 cut(s)	48, 289, 616, 1219
PspPPI	RGGWCCY	2 cut(s)	289, 616
PstI	CTGCAG	1 cut(s)	274
PstNI	CAGNNNCTG	2 cut(s)	611, 728
PsuI	RGATCY	2 cut(s)	533, 724
PvuII	CAGCTG	2 cut(s)	164, 1352
RsaI	GTAC	2 cut(s)	414, 934
RsaNI	GTAC	2 cut(s)	413, 933
RseI	CAYNNNNRTG	3 cut(s)	189, 219, 960
SaqAI	TTAA	3 cut(s)	594, 813, 941
SatI	GCNGC	8 cut(s)	162, 567, 753, 1197, 1322, 1325, 1341, 1350
Sau96I	GGNCC	4 cut(s)	48, 289, 616, 1219
SchI	GAGTC	1 cut(s)	325
ScrFI	CCNGG	4 cut(s)	152, 309, 828, 829
SduI	GDGCHC	4 cut(s)	74, 577, 722, 1362
SfaNI	GCATC	3 cut(s)	26, 236, 751
SfcI	CTRYAG	1 cut(s)	270
SinI	GGWCC	4 cut(s)	48, 289, 616, 1219
SmaI	CCCGGG	1 cut(s)	829
SmiMI	CAYNNNNRTG	3 cut(s)	189, 219, 960
SmlI	CTYRAG	1 cut(s)	593
SmoI	CTYRAG	1 cut(s)	593
SseBI	AGGCCT	1 cut(s)	469
SsiI	CCGC	7 cut(s)	127, 525, 1009, 1172, 1322, 1325, 1343
SspI	AATATT	1 cut(s)	709
SspMI	CTAG	3 cut(s)	333, 543, 1113
StuI	AGGCCT	1 cut(s)	469
StyD4I	CCNGG	4 cut(s)	150, 307, 826, 827
StyI	CCWWGG	1 cut(s)	332
TaaI	ACNGT	2 cut(s)	1108, 1245
TaiI	ACGT	1 cut(s)	439
TaqI	TCGA	2 cut(s)	319, 484
TaqII	GACCGA	1 cut(s)	65
TauI	GCSGC	2 cut(s)	1324, 1327
TfiI	GAWTC	2 cut(s)	209, 507
Tru1I	TTAA	3 cut(s)	594, 813, 941
Tru9I	TTAA	3 cut(s)	594, 813, 941
TscAI	CASTG	3 cut(s)	522, 1113, 1250
TseFI	GTSAC	4 cut(s)	382, 799, 1108, 1247
TseI	GCWGC	6 cut(s)	161, 566, 752, 1196, 1340, 1349
Tsp45I	GTSAC	4 cut(s)	382, 799, 1108, 1247
TspDTI	ATGAA	4 cut(s)	362, 390, 462, 978
TspGWI	ACGGA	1 cut(s)	100
TspMI	CCCGGG	1 cut(s)	827
TspRI	CASTG	3 cut(s)	522, 1113, 1250
Van91I	CCANNNNNTGG	1 cut(s)	1228
Vha464I	CTTAAG	1 cut(s)	593
VneI	GTGCAC	1 cut(s)	1358
VpaK11BI	GGWCC	4 cut(s)	48, 289, 616, 1219
XapI	RAATTY	2 cut(s)	866, 965
XceI	RCATGY	4 cut(s)	354, 479, 807, 1255
XmaI	CCCGGG	1 cut(s)	827
XmaJI	CCTAGG	1 cut(s)	332
XmnI	GAANNNNTTC	1 cut(s)	361
XspI	CTAG	3 cut(s)	333, 543, 1113
Zsp2I	ATGCAT	1 cut(s)	809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.