Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0008413

Physical Location & Seq

Genomic Coordinates Forward (+)

13405425 .. 13411390

Gene Structure 5966 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00293120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1449 bp

ATGGCTTCTTCGTCTCTCACATCCAAACCCTTTCTGGGTTCTGCTTCAAGGACCGAACGGCTTTCTGGGTTGTGCTCCGATCTTCGAAACCTGTCCTCCCCTCCGTTCAGTTCGTGGTCCGGCCTCGGACCACCAAGAAGCTCCGTTAGTTTTCTCTGTTCCTCTCTATTCATTTCTGTTTTCTTCAATAAAGTTGAGGTGCAGGCAGCTGGGAGTACTTTTGGGAATTACTTTCGTGTTACAACTTATGGAGAGTCTCATGGTGGTGGTGTTGGTTGTGTAATTGATGGGGTTCCTCCTCGGAGACCCTTATCTGAAGCTGATTTGCAAGCAGACCTTGACAGAAGGCGGCCAGGTCAGAGCCGAATTACTACCCCTAGGAAGGAAACTGACACATGCAAAATACTTTCAGGAGTCCATGAAGGATTGACTACTGGGACACCTATTCATGTCTTTGTACCCAATACTGATCAGAGAGGACGTGATTATGACGAAATGTCGATAGCTTATAGGCCTTCACATGCAGATCTCACATATGACTTGAAGTACGGTATCAGATCAGTGCAGGGTGGTGGTAGATCTTCAGCTAGAGAAACAATTGGAAGAGTTGCTGCAGGAGCAGTTGCGAAAAAAAAATCCTTAAGGACTTCTCAGGAACTGAGTTCTGAAGTTTTTGCTTATGTTTCACAAGTCCACAAGGTTGTACTCCCAGAAGACTTGGTTGATCATTACACTCTTTCACTTGATCAGTCACATTTGGCCACATTTCCTGCAGCTGTGATTACTCTCCCAAATATGGGAAGACATGTCCCTGTTCATATAGAGAGTAATATAGTTAGGTGTCCAGATCCTGAATATGCAGAGAAGATGATTGCTGCTATTGATGCTGTTAGGGTGAGAGGGGAATCCATTGGTGGTGTTGTCACATGCATAATTAGAAATTGCCCGCGGGGTCTTGGTTCGCCTGTTTTTGACAAACTTGAAGCTGAACTAGCTAAAGCTTGCATGTCATTACCTGCAACAAAAGGATTTGAATTCGGAAGCGGGTTTGCAGGTACCTTTTTAACCGGGAGTGAACATAATGATGAGTTCTATGTGGATGAACAAGGACGAGTCAGGACAAGGACAAATCGCTCTGGTGGGACACAAGGAGGAATATCTAATGGGGAAATCATAAACATGAGAATAGCTTTCAAGCCAACAGCTACAATTGCTAAGAAGCAGAATACGGTGACTAGAGATAAGCATGAGACTGAACTAATAGCCCGTGGTCGCCATGATCCTTGTGTTGTCCCGCGAGCGGTTCCAATGGTGGAGGCTGGAGTGGCACTAGTGCTCGTGGATCAGTTAATGGCTCAATATGCACAATGCCATCTTTTTCCTTACAATCCGGATGTACAAGAACCTCTCTCCAAAGTGAACCCCCTTCCAACTATGTCTTTGTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004107 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009423 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010181 GO:0016053 GO:0016829 GO:0016835 GO:0016838 GO:0019438 GO:0019752 GO:0031974 GO:0031981 GO:0032553 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046417 GO:0048037 GO:0050662 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Chorismate_synt

Protein Analysis

482

Amino Acids

52.21

Weight (kDa)

8.46

Isoelectric Point (pI)

50.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Chorismate_synt	PF01264	78 - 451	2.8e-130	Chorismate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48850 AT1G48850 AT1G48850
fragaria_vesca	FvH4_7g19670 FvH4_7g19670
malus_domestica	MD01G1108900.v1.1 MD07G1175200.v1.1
prunus_persica	Prupe.2G214400_v2.0.a1 Prupe.2G214400_v2.0.a1 Prupe.2G214400_v2.0.a1
pyrus_communis	pycom07g16960
rosa_chinensis	RchiOBHm_Chr1g0363491
rosa_laevigata	RLG00000027561
rosa_multiflora	Rmu_sc0008820.1_g000005
rosa_roxburghii	Rroxscaffold_4G00293120
rosa_rugosa	Rorug01G0307400 Rorug01G0307500 Rorug01G0307600
rosa_samantha	Rh1AG316600 Rh1BG279900 Rh1CG296100 Rh1DG311200
rosa_wichuraiana	Rw1G028050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1024, 1043
Acc65I	GGTACC	1 cut(s)	1055
AccB1I	GGYRCC	1 cut(s)	1055
AccBSI	CCGCTC	1 cut(s)	1301
AccII	CGCG	2 cut(s)	949, 1297
AccIII	TCCGGA	1 cut(s)	1390
AciI	CCGC	6 cut(s)	349, 947, 949, 1044, 1295, 1301
AclWI	GGATC	3 cut(s)	842, 1274, 1350
AcoI	YGGCCR	2 cut(s)	350, 759
AcsI	RAATTY	1 cut(s)	1034
AcuI	CTGAAG	3 cut(s)	336, 567, 687
AfaI	GTAC	6 cut(s)	217, 459, 548, 705, 1057, 1398
AfiI	CCNNNNNNNGG	5 cut(s)	35, 382, 796, 797, 1300
AflII	CTTAAG	1 cut(s)	640
AflIII	ACRYGT	1 cut(s)	805
AgsI	TTSAA	6 cut(s)	48, 187, 544, 983, 1034, 1195
AhdI	GACNNNNNGTC	1 cut(s)	496
AhlI	ACTAGT	1 cut(s)	1330
AjiI	CACGTC	1 cut(s)	482
AjnI	CCWGG	1 cut(s)	352
Alw21I	GWGCWC	2 cut(s)	77, 1338
Alw26I	GTCTC	4 cut(s)	18, 261, 298, 1244
AlwI	GGATC	3 cut(s)	842, 1274, 1350
AlwNI	CAGNNNCTG	2 cut(s)	658, 851
Aor13HI	TCCGGA	1 cut(s)	1390
AoxI	GGCC	4 cut(s)	121, 350, 512, 759
ApeKI	GCWGC	4 cut(s)	206, 611, 773, 875
ApoI	RAATTY	1 cut(s)	1034
Asp718I	GGTACC	1 cut(s)	1055
AspA2I	CCTAGG	1 cut(s)	377
AspS9I	GGNCC	3 cut(s)	51, 117, 128
AsuC2I	CCSGG	1 cut(s)	1069
AsuHPI	GGTGA	2 cut(s)	907, 1243
AsuII	TTCGAA	1 cut(s)	85
AvaII	GGWCC	3 cut(s)	51, 117, 128
AvrII	CCTAGG	1 cut(s)	377
BalI	TGGCCA	1 cut(s)	761
BanI	GGYRCC	1 cut(s)	1055
BauI	CACGAG	1 cut(s)	1337
BbsI	GAAGAC	2 cut(s)	720, 808
Bbv12I	GWGCWC	2 cut(s)	77, 1338
BbvI	GCAGC	4 cut(s)	218, 598, 785, 862
BccI	CCATC	2 cut(s)	281, 1380
BceAI	ACGGC	1 cut(s)	74
BciT130I	CCWGG	1 cut(s)	354
BclI	TGATCA	3 cut(s)	469, 724, 745
BcnI	CCSGG	1 cut(s)	1069
BcoDI	GTCTC	4 cut(s)	18, 261, 298, 1244
BcuI	ACTAGT	1 cut(s)	1330
BfaI	CTAG	5 cut(s)	378, 588, 992, 1236, 1331
BfmI	CTRYAG	2 cut(s)	612, 771
BfrI	CTTAAG	1 cut(s)	640
BfuAI	ACCTGC	2 cut(s)	1024, 1043
BglII	AGATCT	2 cut(s)	526, 578
BisI	GCNGC	5 cut(s)	207, 350, 612, 774, 876
BlnI	CCTAGG	1 cut(s)	377
BlsI	GCNGC	5 cut(s)	208, 351, 613, 775, 877
BmcAI	AGTACT	1 cut(s)	217
Bme1390I	CCNGG	2 cut(s)	354, 1069
Bme18I	GGWCC	3 cut(s)	51, 117, 128
BmeRI	GACNNNNNGTC	1 cut(s)	496
BmgBI	CACGTC	1 cut(s)	482
BmgT120I	GGNCC	3 cut(s)	51, 117, 128
BmiI	GGNNCC	3 cut(s)	294, 1057, 1305
BmrFI	CCNGG	2 cut(s)	354, 1069
BmrI	ACTGGG	1 cut(s)	444
BmsI	GCATC	1 cut(s)	874
BmuI	ACTGGG	1 cut(s)	444
BpiI	GAAGAC	2 cut(s)	720, 808
BpmI	CTGGAG	1 cut(s)	1341
Bpu14I	TTCGAA	1 cut(s)	85
BpuMI	CCSGG	1 cut(s)	1069
BsaI	GGTCTC	1 cut(s)	298
BsaJI	CCNNGG	5 cut(s)	124, 299, 377, 947, 1267
BsaWI	WCCGGW	1 cut(s)	1390
BsaXI	ACNNNNNCTCC	2 cut(s)	80, 110
Bsc4I	CCNNNNNNNGG	5 cut(s)	35, 382, 796, 797, 1300
Bse1I	ACTGG	1 cut(s)	439
BseAI	TCCGGA	1 cut(s)	1390
BseBI	CCWGG	1 cut(s)	354
BseDI	CCNNGG	5 cut(s)	124, 299, 377, 947, 1267
BseGI	GGATG	3 cut(s)	20, 1105, 1399
BseLI	CCNNNNNNNGG	5 cut(s)	35, 382, 796, 797, 1300
BseMII	CTCAG	2 cut(s)	650, 665
BseNI	ACTGG	1 cut(s)	439
BseRI	GAGGAG	1 cut(s)	288
BseXI	GCAGC	4 cut(s)	218, 598, 785, 862
BseYI	CCCAGC	1 cut(s)	209
BsgI	GTGCAG	2 cut(s)	221, 584
Bsh1236I	CGCG	2 cut(s)	949, 1297
BshFI	GGCC	4 cut(s)	123, 352, 514, 761
BshNI	GGYRCC	1 cut(s)	1055
BsiHKAI	GWGCWC	2 cut(s)	77, 1338
BsiSI	CCGG	3 cut(s)	120, 1068, 1391
BslFI	GGGAC	4 cut(s)	451, 794, 1156, 1277
BslI	CCNNNNNNNGG	5 cut(s)	35, 382, 796, 797, 1300
BsmAI	GTCTC	4 cut(s)	18, 261, 298, 1244
BsmBI	CGTCTC	1 cut(s)	18
BsmFI	GGGAC	4 cut(s)	451, 794, 1156, 1277
BsnI	GGCC	4 cut(s)	123, 352, 514, 761
Bso31I	GGTCTC	1 cut(s)	298
Bsp119I	TTCGAA	1 cut(s)	85
Bsp1286I	GDGCHC	2 cut(s)	77, 1338
Bsp13I	TCCGGA	1 cut(s)	1390
Bsp1407I	TGTACA	1 cut(s)	1396
BspACI	CCGC	6 cut(s)	349, 947, 949, 1044, 1295, 1301
BspANI	GGCC	4 cut(s)	123, 352, 514, 761
BspCNI	CTCAG	2 cut(s)	651, 664
BspEI	TCCGGA	1 cut(s)	1390
BspFNI	CGCG	2 cut(s)	949, 1297
BspLI	GGNNCC	3 cut(s)	294, 1057, 1305
BspMAI	CTGCAG	2 cut(s)	616, 775
BspMI	ACCTGC	2 cut(s)	1024, 1043
BspPI	GGATC	3 cut(s)	842, 1274, 1350
BspT104I	TTCGAA	1 cut(s)	85
BspT107I	GGYRCC	1 cut(s)	1055
BspTI	CTTAAG	1 cut(s)	640
BspTNI	GGTCTC	1 cut(s)	298
BsrBI	CCGCTC	1 cut(s)	1301
BsrGI	TGTACA	1 cut(s)	1396
BsrI	ACTGG	1 cut(s)	439
BssECI	CCNNGG	5 cut(s)	124, 299, 377, 947, 1267
BssSI	CACGAG	1 cut(s)	1337
BssT1I	CCWWGG	1 cut(s)	377
Bst2BI	CACGAG	1 cut(s)	1337
Bst2UI	CCWGG	1 cut(s)	354
Bst4CI	ACNGT	2 cut(s)	551, 1231
Bst6I	CTCTTC	1 cut(s)	598
BstAFI	CTTAAG	1 cut(s)	640
BstAUI	TGTACA	1 cut(s)	1396
BstBI	TTCGAA	1 cut(s)	85
BstC8I	GCNNGC	5 cut(s)	204, 330, 947, 1003, 1299
BstDEI	CTNAG	3 cut(s)	651, 659, 1215
BstDSI	CCRYGG	2 cut(s)	947, 1267
BstF5I	GGATG	3 cut(s)	20, 1105, 1399
BstFNI	CGCG	2 cut(s)	949, 1297
BstMAI	GTCTC	4 cut(s)	18, 261, 298, 1244
BstMWI	GCNNNNNNNGC	6 cut(s)	617, 884, 992, 1211, 1325, 1361
BstNI	CCWGG	1 cut(s)	354
BstNSI	RCATGY	5 cut(s)	399, 524, 809, 930, 1009
BstSCI	CCNGG	2 cut(s)	352, 1067
BstSFI	CTRYAG	2 cut(s)	612, 771
BstUI	CGCG	2 cut(s)	949, 1297
BstV1I	GCAGC	4 cut(s)	218, 598, 785, 862
BstV2I	GAAGAC	2 cut(s)	720, 808
BstX2I	RGATCY	3 cut(s)	526, 578, 847
BstYI	RGATCY	3 cut(s)	526, 578, 847
BsuRI	GGCC	4 cut(s)	123, 352, 514, 761
BtgI	CCRYGG	2 cut(s)	947, 1267
BtrI	CACGTC	1 cut(s)	482
BtsCI	GGATG	3 cut(s)	20, 1105, 1399
BtsIMutI	CAGTG	1 cut(s)	567
BveI	ACCTGC	2 cut(s)	1024, 1043
Cac8I	GCNNGC	5 cut(s)	204, 330, 947, 1003, 1299
CaiI	CAGNNNCTG	2 cut(s)	658, 851
Cfr13I	GGNCC	3 cut(s)	51, 117, 128
Cfr42I	CCGCGG	1 cut(s)	950
Csp6I	GTAC	6 cut(s)	216, 458, 547, 704, 1056, 1397
CviQI	GTAC	6 cut(s)	216, 458, 547, 704, 1056, 1397
DdeI	CTNAG	3 cut(s)	651, 659, 1215
DriI	GACNNNNNGTC	1 cut(s)	496
EaeI	YGGCCR	2 cut(s)	350, 759
Eam1104I	CTCTTC	1 cut(s)	598
Eam1105I	GACNNNNNGTC	1 cut(s)	496
EarI	CTCTTC	1 cut(s)	598
Eco130I	CCWWGG	1 cut(s)	377
Eco147I	AGGCCT	1 cut(s)	514
Eco31I	GGTCTC	1 cut(s)	298
Eco47I	GGWCC	3 cut(s)	51, 117, 128
Eco57I	CTGAAG	3 cut(s)	336, 567, 687
EcoRI	GAATTC	1 cut(s)	1034
EcoRII	CCWGG	1 cut(s)	352
EcoT14I	CCWWGG	1 cut(s)	377
EcoT22I	ATGCAT	1 cut(s)	932
ErhI	CCWWGG	1 cut(s)	377
Esp3I	CGTCTC	1 cut(s)	18
FalI	AAGNNNNNCTT	2 cut(s)	321, 353
FaqI	GGGAC	4 cut(s)	451, 794, 1156, 1277
FauI	CCCGC	4 cut(s)	942, 954, 1037, 1302
FauNDI	CATATG	1 cut(s)	535
FbaI	TGATCA	3 cut(s)	469, 724, 745
Fnu4HI	GCNGC	5 cut(s)	207, 350, 612, 774, 876
FokI	GGATG	3 cut(s)	7, 1112, 1406
Fsp4HI	GCNGC	5 cut(s)	207, 350, 612, 774, 876
FspBI	CTAG	5 cut(s)	378, 588, 992, 1236, 1331
GluI	GCNGC	5 cut(s)	207, 350, 612, 774, 876
GsaI	CCCAGC	1 cut(s)	213
GsuI	CTGGAG	1 cut(s)	1341
HaeIII	GGCC	4 cut(s)	123, 352, 514, 761
HapII	CCGG	3 cut(s)	120, 1068, 1391
HindIII	AAGCTT	1 cut(s)	999
HinfI	GANTC	4 cut(s)	254, 414, 905, 1113
HpaII	CCGG	3 cut(s)	120, 1068, 1391
HphI	GGTGA	2 cut(s)	907, 1243
Hpy166II	GTNNAC	3 cut(s)	694, 1076, 1420
Hpy188I	TCNGA	9 cut(s)	79, 128, 303, 316, 360, 474, 557, 667, 1040
Hpy188III	TCNNGA	6 cut(s)	411, 653, 845, 851, 1117, 1391
Hpy8I	GTNNAC	3 cut(s)	694, 1076, 1420
HpyAV	CCTTC	5 cut(s)	339, 376, 416, 525, 1436
HpyCH4III	ACNGT	2 cut(s)	551, 1231
HpyCH4IV	ACGT	1 cut(s)	481
HpyF10VI	GCNNNNNNNGC	6 cut(s)	617, 884, 992, 1211, 1325, 1361
HpyF3I	CTNAG	3 cut(s)	651, 659, 1215
HpySE526I	ACGT	1 cut(s)	481
Kpn2I	TCCGGA	1 cut(s)	1390
KpnI	GGTACC	1 cut(s)	1059
Ksp22I	TGATCA	3 cut(s)	469, 724, 745
KspI	CCGCGG	1 cut(s)	950
LmnI	GCTCC	3 cut(s)	80, 146, 617
Lsp1109I	GCAGC	4 cut(s)	218, 598, 785, 862
LweI	GCATC	1 cut(s)	874
MaeI	CTAG	5 cut(s)	378, 588, 992, 1236, 1331
MaeII	ACGT	1 cut(s)	481
MaeIII	GTNAC	4 cut(s)	238, 750, 922, 1231
MbiI	CCGCTC	1 cut(s)	1301
MboII	GAAGA	7 cut(s)	74, 175, 573, 615, 725, 813, 877
MfeI	CAATTG	2 cut(s)	597, 1209
MflI	RGATCY	3 cut(s)	526, 578, 847
MhlI	GDGCHC	2 cut(s)	77, 1338
MlsI	TGGCCA	1 cut(s)	761
MluCI	AATT	8 cut(s)	226, 282, 366, 597, 933, 940, 1034, 1209
MluNI	TGGCCA	1 cut(s)	761
MlyI	GAGTC	3 cut(s)	263, 423, 1122
Mox20I	TGGCCA	1 cut(s)	761
Mph1103I	ATGCAT	1 cut(s)	932
MroI	TCCGGA	1 cut(s)	1390
MscI	TGGCCA	1 cut(s)	761
MseI	TTAA	3 cut(s)	641, 1064, 1349
MslI	CAYNNNNRTG	3 cut(s)	264, 1083, 1178
Msp20I	TGGCCA	1 cut(s)	761
MspA1I	CMGCKG	3 cut(s)	209, 776, 949
MspCI	CTTAAG	1 cut(s)	640
MspI	CCGG	3 cut(s)	120, 1068, 1391
MspR9I	CCNGG	2 cut(s)	354, 1069
MunI	CAATTG	2 cut(s)	597, 1209
MvaI	CCWGG	1 cut(s)	354
MvnI	CGCG	2 cut(s)	949, 1297
MwoI	GCNNNNNNNGC	6 cut(s)	617, 884, 992, 1211, 1325, 1361
NciI	CCSGG	1 cut(s)	1069
NdeI	CATATG	1 cut(s)	535
NlaIV	GGNNCC	3 cut(s)	294, 1057, 1305
NmuCI	GTSAC	3 cut(s)	750, 922, 1231
NsiI	ATGCAT	1 cut(s)	932
NspI	RCATGY	5 cut(s)	399, 524, 809, 930, 1009
NspV	TTCGAA	1 cut(s)	85
PceI	AGGCCT	1 cut(s)	514
PciI	ACATGT	1 cut(s)	805
PfeI	GAWTC	1 cut(s)	905
PkrI	GCNGC	5 cut(s)	208, 351, 613, 775, 877
PleI	GAGTC	3 cut(s)	262, 422, 1121
PpsI	GAGTC	3 cut(s)	262, 422, 1121
PscI	ACATGT	1 cut(s)	805
Psp6I	CCWGG	1 cut(s)	352
PspFI	CCCAGC	1 cut(s)	209
PspGI	CCWGG	1 cut(s)	352
PspN4I	GGNNCC	3 cut(s)	294, 1057, 1305
PspPI	GGNCC	3 cut(s)	51, 117, 128
PstI	CTGCAG	2 cut(s)	616, 775
PstNI	CAGNNNCTG	2 cut(s)	658, 851
PsuI	RGATCY	3 cut(s)	526, 578, 847
PvuII	CAGCTG	2 cut(s)	209, 776
RsaI	GTAC	6 cut(s)	217, 459, 548, 705, 1057, 1398
RsaNI	GTAC	6 cut(s)	216, 458, 547, 704, 1056, 1397
RseI	CAYNNNNRTG	3 cut(s)	264, 1083, 1178
SacII	CCGCGG	1 cut(s)	950
SaqAI	TTAA	3 cut(s)	641, 1064, 1349
SatI	GCNGC	5 cut(s)	207, 350, 612, 774, 876
Sau96I	GGNCC	3 cut(s)	51, 117, 128
ScaI	AGTACT	1 cut(s)	217
SchI	GAGTC	3 cut(s)	263, 423, 1122
ScrFI	CCNGG	2 cut(s)	354, 1069
SduI	GDGCHC	2 cut(s)	77, 1338
SfaNI	GCATC	1 cut(s)	874
SfcI	CTRYAG	2 cut(s)	612, 771
Sfr303I	CCGCGG	1 cut(s)	950
SfuI	TTCGAA	1 cut(s)	85
SgrBI	CCGCGG	1 cut(s)	950
SinI	GGWCC	3 cut(s)	51, 117, 128
SmiMI	CAYNNNNRTG	3 cut(s)	264, 1083, 1178
SmlI	CTYRAG	1 cut(s)	640
SmoI	CTYRAG	1 cut(s)	640
SpeI	ACTAGT	1 cut(s)	1330
Sse9I	AATT	8 cut(s)	226, 282, 366, 597, 933, 940, 1034, 1209
SseBI	AGGCCT	1 cut(s)	514
SsiI	CCGC	6 cut(s)	349, 947, 949, 1044, 1295, 1301
SspMI	CTAG	5 cut(s)	378, 588, 992, 1236, 1331
StuI	AGGCCT	1 cut(s)	514
StyD4I	CCNGG	2 cut(s)	352, 1067
StyI	CCWWGG	1 cut(s)	377
TaaI	ACNGT	2 cut(s)	551, 1231
TaiI	ACGT	1 cut(s)	484
TaqI	TCGA	2 cut(s)	85, 500
TaqII	GACCGA	1 cut(s)	68
TasI	AATT	8 cut(s)	226, 282, 366, 597, 933, 940, 1034, 1209
TatI	WGTACW	3 cut(s)	215, 703, 1396
TauI	GCSGC	1 cut(s)	352
TfiI	GAWTC	1 cut(s)	905
Tru1I	TTAA	3 cut(s)	641, 1064, 1349
Tru9I	TTAA	3 cut(s)	641, 1064, 1349
TscAI	CASTG	1 cut(s)	567
TseFI	GTSAC	3 cut(s)	750, 922, 1231
TseI	GCWGC	4 cut(s)	206, 611, 773, 875
Tsp45I	GTSAC	3 cut(s)	750, 922, 1231
TspDTI	ATGAA	5 cut(s)	160, 435, 437, 806, 1116
TspGWI	ACGGA	2 cut(s)	93, 133
TspRI	CASTG	1 cut(s)	567
Vha464I	CTTAAG	1 cut(s)	640
VpaK11BI	GGWCC	3 cut(s)	51, 117, 128
XapI	RAATTY	1 cut(s)	1034
XceI	RCATGY	5 cut(s)	399, 524, 809, 930, 1009
XcmI	CCANNNNNNNNNTGG	1 cut(s)	31
XmaJI	CCTAGG	1 cut(s)	377
XspI	CTAG	5 cut(s)	378, 588, 992, 1236, 1331
ZrmI	AGTACT	1 cut(s)	217
Zsp2I	ATGCAT	1 cut(s)	932

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.