Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0011821

Physical Location & Seq

Genomic Coordinates Reverse (-)

25496909 .. 25499728

Gene Structure 2820 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1144700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1239 bp

ATGACGGCCCCAAACGGCGCCGTCCCCAAACAAGCCGACGACCGCCCCGGCACCGAGGCCGAGTTGAACGAGGGCGCAGTGCCCAACGGGAAAGTGAGGGGACCGTGGTCGCCCGAGGAGGACGCGGTGCTGAGCCGGCTCGTGAGCAACTTCGGGGCGAGGAATTGGAGCCTGATCGCCCGAGGAATTCCCGGACGGTCTGGGAAGTCGTGCCGGCTGAGGTGGTGTAATCAGCTTGACCCCTGCGTCAAGCGTAAACCCTTTTCTGAGGAAGAAGACCGTATTATAGTTTCAGCACATGCTATCCATGGGAACAAATGGGCAGTAATTGCAAAGCTTCTTCCAGGTAGAACAGATAACGGAATCAAGAACCATTGGAATTCTACACTAAGGCGCAAGTGCTTTGATAAAGGAAGGTTTAATACTGGACCTGGGGAAATGATGGAAGATGACACCTTTGACAGAAAAAATGCATCCTCAGAAGAAACCCTGTCAGTTGGGAATATCAGTTCATTCAAGACTCATGAAGGAAGAGAGGTCTTGATGGAAAATAGACCAAACCAGTTCGATGTAAGAAGTCATGCAAAGGAGGGCTCTGGCGCTGCCGAATCAAAGCACAATTCTACTCTTATTGCCGAGCCAAGAGACCATCCGACTCTCCAGTCCACCATTTGTTGTCCAGTGGCACGTGTTAGTGCATTTAGTGTTTATAACCGTCCAAGTGTTCCAGCAAATGCTTCATCGTTGTCAAGGACAGTCCCAAGTCATGGCCCTTTGGTCCCAATAACTAAACTAGATTTCGGCTTTGACAACTTCCTTGAAGGTGCATGCAATGAGCCTACGGTTCCTCAACGCTGTGGTCACGGTTGCTGTGATCGAATTGAGGGGCATTCTCAAAGCTCGTTGTTGGGGCCTGAGTTCGTTGAGTATGATGAGCCTCTCCCTTTCTCTAGCCACGAATTAATCTCCATTGCTACGGATTTGAACAAGATTGCATGGATTAAGGGTGGCCTTGAGAGTAATGGGATAAGGATGCCAGAGCACGTAGCAAGCCAGAGAGTCTTTCAAGCAGCTGCCACTACCTTGCAAATGGGGTTGCCAGCAAACACTCCGATGAATGACCATATGCGCTTTGAGGAAGGAAGAAACAAGTTGATGGGAATGATGACGGACGTGCTATCAACCCAGGTGCCTAGACAAACTTTTGCAATGCCAACTGAAGTTGAGGGATTGAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0006970 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0046686 GO:0048229 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0097305 GO:0098542 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000022 GO:2000031 GO:2000112 GO:2001023 GO:2001038 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

413

Amino Acids

45.25

Weight (kDa)

6.51

Isoelectric Point (pI)

45.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	33 - 79	9.7e-17	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	36 - 94	6e-16	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	85 - 129	1e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	88 - 134	4.8e-07	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39880 AT3G55730
fragaria_vesca	FvH4_7g23750
malus_domestica	MD01G1144700.v1.1 MD07G1211300.v1.1
prunus_persica	Prupe.2G244100_v2.0.a1
pyrus_communis	pycom01g16430 pycom07g19480
rosa_chinensis	RchiOBHm_Chr1g0369061
rosa_laevigata	RLG00000027160
rosa_multiflora	Rmu_sc0004250.1_g000025 Rmu_sc0008155.1_g000001
rosa_roxburghii	Rroxscaffold_4G00288040
rosa_rugosa	Rorug01G0347700
rosa_samantha	Rh1AG354500 Rh1BG317800 Rh1CG332300 Rh1DG348700
rosa_wichuraiana	Rw1G031300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	711
AasI	GACNNNNNNGTC	2 cut(s)	245, 661
AccB1I	GGYRCC	3 cut(s)	17, 50, 1189
AccB7I	CCANNNNNTGG	1 cut(s)	767
AccII	CGCG	1 cut(s)	125
AciI	CCGC	2 cut(s)	43, 125
AcsI	RAATTY	2 cut(s)	186, 379
AcuI	CTGAAG	1 cut(s)	1239
AcvI	CACGTG	1 cut(s)	689
AcyI	GRCGYC	1 cut(s)	18
AfiI	CCNNNNNNNGG	1 cut(s)	767
AflIII	ACRYGT	1 cut(s)	688
AgsI	TTSAA	5 cut(s)	67, 517, 821, 985, 1067
AjiI	CACGTC	1 cut(s)	1174
AjnI	CCWGG	3 cut(s)	343, 430, 1185
AloI	GAACNNNNNNTCC	2 cut(s)	493, 525
AluBI	AGCT	5 cut(s)	235, 337, 900, 1073, 1236
AluI	AGCT	5 cut(s)	235, 337, 900, 1073, 1236
Alw21I	GWGCWC	1 cut(s)	1044
Alw26I	GTCTC	1 cut(s)	639
Ama87I	CYCGRG	2 cut(s)	113, 180
AoxI	GGCC	5 cut(s)	6, 57, 769, 911, 1009
ApeKI	GCWGC	3 cut(s)	602, 1070, 1073
ApoI	RAATTY	2 cut(s)	186, 379
AseI	ATTAAT	1 cut(s)	962
AspLEI	GCGC	5 cut(s)	20, 77, 396, 602, 1131
AspS9I	GGNCC	6 cut(s)	7, 101, 428, 770, 778, 911
AsuC2I	CCSGG	2 cut(s)	48, 192
AvaI	CYCGRG	2 cut(s)	113, 180
AvaII	GGWCC	3 cut(s)	101, 428, 778
BaeGI	GKGCMC	1 cut(s)	84
BanI	GGYRCC	3 cut(s)	17, 50, 1189
BanII	GRGCYC	1 cut(s)	596
BarI	GAAGNNNNNNTAC	2 cut(s)	406, 438
BauI	CACGAG	1 cut(s)	140
BbrPI	CACGTG	1 cut(s)	689
BbsI	GAAGAC	1 cut(s)	282
Bbv12I	GWGCWC	1 cut(s)	1044
BbvCI	CCTCAGC	1 cut(s)	218
BbvI	GCAGC	3 cut(s)	589, 1060, 1082
BccI	CCATC	4 cut(s)	436, 538, 657, 1150
BceAI	ACGGC	3 cut(s)	5, 21, 31
BciT130I	CCWGG	3 cut(s)	345, 432, 1187
BcnI	CCSGG	2 cut(s)	48, 192
BcoDI	GTCTC	1 cut(s)	639
BfaI	CTAG	4 cut(s)	794, 951, 1194, 1237
BfoI	RGCGCY	2 cut(s)	21, 603
BisI	GCNGC	3 cut(s)	603, 1071, 1074
BlpI	GCTNAGC	1 cut(s)	131
BlsI	GCNGC	3 cut(s)	604, 1072, 1075
Bme1390I	CCNGG	5 cut(s)	48, 192, 345, 432, 1187
Bme18I	GGWCC	3 cut(s)	101, 428, 778
BmeT110I	CYCGRG	2 cut(s)	113, 180
BmgBI	CACGTC	1 cut(s)	1174
BmgT120I	GGNCC	6 cut(s)	7, 101, 428, 770, 778, 911
BmiI	GGNNCC	9 cut(s)	9, 19, 52, 102, 170, 780, 846, 912, 1191
BmrFI	CCNGG	5 cut(s)	48, 192, 345, 432, 1187
BmsI	GCATC	2 cut(s)	482, 1023
BoxI	GACNNNNGTC	1 cut(s)	106
BpiI	GAAGAC	1 cut(s)	282
BpmI	CTGGAG	1 cut(s)	644
Bpu10I	CCTNAGC	1 cut(s)	218
Bpu1102I	GCTNAGC	1 cut(s)	131
BpuEI	CTTGAG	1 cut(s)	1034
BpuMI	CCSGG	2 cut(s)	48, 192
BsaAI	YACGTR	2 cut(s)	689, 1045
BsaHI	GRCGYC	1 cut(s)	18
BsaI	GGTCTC	1 cut(s)	639
BsaJI	CCNNGG	8 cut(s)	46, 54, 104, 114, 181, 307, 431, 1185
Bsc4I	CCNNNNNNNGG	1 cut(s)	767
Bse118I	RCCGGY	2 cut(s)	135, 213
Bse1I	ACTGG	4 cut(s)	430, 562, 661, 680
Bse3DI	GCAATG	3 cut(s)	838, 969, 1215
BseBI	CCWGG	3 cut(s)	345, 432, 1187
BseDI	CCNNGG	8 cut(s)	46, 54, 104, 114, 181, 307, 431, 1185
BseGI	GGATG	3 cut(s)	473, 649, 1038
BseLI	CCNNNNNNNGG	1 cut(s)	767
BseMI	GCAATG	3 cut(s)	838, 969, 1215
BseMII	CTCAG	5 cut(s)	122, 209, 258, 492, 906
BseNI	ACTGG	4 cut(s)	430, 562, 661, 680
BseRI	GAGGAG	1 cut(s)	131
BseSI	GKGCMC	1 cut(s)	84
BseXI	GCAGC	3 cut(s)	589, 1060, 1082
Bsh1236I	CGCG	1 cut(s)	125
Bsh1285I	CGRYCG	1 cut(s)	43
BshFI	GGCC	5 cut(s)	8, 59, 771, 913, 1011
BshNI	GGYRCC	3 cut(s)	17, 50, 1189
BsiEI	CGRYCG	1 cut(s)	43
BsiHKAI	GWGCWC	1 cut(s)	1044
BsiHKCI	CYCGRG	2 cut(s)	113, 180
BsiSI	CCGG	4 cut(s)	48, 136, 192, 214
BslFI	GGGAC	4 cut(s)	8, 114, 743, 764
BslI	CCNNNNNNNGG	1 cut(s)	767
BsmAI	GTCTC	1 cut(s)	639
BsmFI	GGGAC	4 cut(s)	8, 114, 743, 764
BsmI	GAATGC	1 cut(s)	889
BsnI	GGCC	5 cut(s)	8, 59, 771, 913, 1011
Bso31I	GGTCTC	1 cut(s)	639
BsoBI	CYCGRG	2 cut(s)	113, 180
Bsp1286I	GDGCHC	3 cut(s)	84, 596, 1044
Bsp143I	GATC	2 cut(s)	174, 874
Bsp1720I	GCTNAGC	1 cut(s)	131
Bsp19I	CCATGG	1 cut(s)	307
BspACI	CCGC	2 cut(s)	43, 125
BspANI	GGCC	5 cut(s)	8, 59, 771, 913, 1011
BspCNI	CTCAG	5 cut(s)	123, 210, 259, 491, 907
BspFNI	CGCG	1 cut(s)	125
BspHI	TCATGA	1 cut(s)	523
BspLI	GGNNCC	9 cut(s)	9, 19, 52, 102, 170, 780, 846, 912, 1191
BspT107I	GGYRCC	3 cut(s)	17, 50, 1189
BspTNI	GGTCTC	1 cut(s)	639
BsrDI	GCAATG	3 cut(s)	838, 969, 1215
BsrFI	RCCGGY	2 cut(s)	135, 213
BsrI	ACTGG	4 cut(s)	430, 562, 661, 680
BssAI	RCCGGY	2 cut(s)	135, 213
BssECI	CCNNGG	8 cut(s)	46, 54, 104, 114, 181, 307, 431, 1185
BssMI	GATC	2 cut(s)	174, 874
BssNI	GRCGYC	1 cut(s)	18
BssSI	CACGAG	1 cut(s)	140
BssT1I	CCWWGG	1 cut(s)	307
Bst2BI	CACGAG	1 cut(s)	140
Bst2UI	CCWGG	3 cut(s)	345, 432, 1187
Bst4CI	ACNGT	7 cut(s)	105, 198, 281, 716, 757, 844, 866
Bst6I	CTCTTC	1 cut(s)	526
BstACI	GRCGYC	1 cut(s)	18
BstAPI	GCANNNNNTGC	1 cut(s)	329
BstBAI	YACGTR	2 cut(s)	689, 1045
BstC8I	GCNNGC	5 cut(s)	137, 215, 829, 1051, 1101
BstDEI	CTNAG	6 cut(s)	131, 218, 267, 389, 478, 915
BstDSI	CCRYGG	2 cut(s)	104, 307
BstF5I	GGATG	3 cut(s)	473, 649, 1038
BstFNI	CGCG	1 cut(s)	125
BstH2I	RGCGCY	2 cut(s)	21, 603
BstHHI	GCGC	5 cut(s)	20, 77, 396, 602, 1131
BstKTI	GATC	2 cut(s)	177, 877
BstMAI	GTCTC	1 cut(s)	639
BstMBI	GATC	2 cut(s)	174, 874
BstMCI	CGRYCG	1 cut(s)	43
BstMWI	GCNNNNNNNGC	2 cut(s)	136, 329
BstNI	CCWGG	3 cut(s)	345, 432, 1187
BstNSI	RCATGY	2 cut(s)	302, 831
BstPAI	GACNNNNGTC	1 cut(s)	106
BstSCI	CCNGG	5 cut(s)	46, 190, 343, 430, 1185
BstSLI	GKGCMC	1 cut(s)	84
BstUI	CGCG	1 cut(s)	125
BstV1I	GCAGC	3 cut(s)	589, 1060, 1082
BstV2I	GAAGAC	1 cut(s)	282
BsuRI	GGCC	5 cut(s)	8, 59, 771, 913, 1011
BtgI	CCRYGG	2 cut(s)	104, 307
BtrI	CACGTC	1 cut(s)	1174
BtsCI	GGATG	3 cut(s)	473, 649, 1038
BtsI	GCAGTG	1 cut(s)	84
BtsIMutI	CAGTG	2 cut(s)	84, 687
Cac8I	GCNNGC	5 cut(s)	137, 215, 829, 1051, 1101
CciI	TCATGA	1 cut(s)	523
CfoI	GCGC	5 cut(s)	20, 77, 396, 602, 1131
Cfr10I	RCCGGY	2 cut(s)	135, 213
Cfr13I	GGNCC	6 cut(s)	7, 101, 428, 770, 778, 911
CseI	GACGC	2 cut(s)	131, 235
CviAII	CATG	7 cut(s)	299, 308, 524, 581, 767, 828, 996
DdeI	CTNAG	6 cut(s)	131, 218, 267, 389, 478, 915
DinI	GGCGCC	1 cut(s)	19
DpnI	GATC	2 cut(s)	176, 876
DpnII	GATC	2 cut(s)	174, 874
DrdI	GACNNNNNNGTC	2 cut(s)	245, 661
DseDI	GACNNNNNNGTC	2 cut(s)	245, 661
Eam1104I	CTCTTC	1 cut(s)	526
EarI	CTCTTC	1 cut(s)	526
Eco130I	CCWWGG	1 cut(s)	307
Eco24I	GRGCYC	1 cut(s)	596
Eco31I	GGTCTC	1 cut(s)	639
Eco47I	GGWCC	3 cut(s)	101, 428, 778
Eco57I	CTGAAG	1 cut(s)	1239
Eco72I	CACGTG	1 cut(s)	689
Eco88I	CYCGRG	2 cut(s)	113, 180
EcoO109I	RGGNCCY	1 cut(s)	911
EcoRI	GAATTC	2 cut(s)	186, 379
EcoRII	CCWGG	3 cut(s)	343, 430, 1185
EcoT14I	CCWWGG	1 cut(s)	307
EcoT22I	ATGCAT	1 cut(s)	475
EcoT38I	GRGCYC	1 cut(s)	596
EgeI	GGCGCC	1 cut(s)	19
EheI	GGCGCC	1 cut(s)	19
ErhI	CCWWGG	1 cut(s)	307
FaeI	CATG	7 cut(s)	302, 311, 527, 584, 770, 831, 999
FaqI	GGGAC	4 cut(s)	8, 114, 743, 764
FatI	CATG	7 cut(s)	298, 307, 523, 580, 766, 827, 995
FauNDI	CATATG	1 cut(s)	1125
Fnu4HI	GCNGC	3 cut(s)	603, 1071, 1074
FokI	GGATG	3 cut(s)	460, 636, 1045
FriOI	GRGCYC	1 cut(s)	596
Fsp4HI	GCNGC	3 cut(s)	603, 1071, 1074
FspBI	CTAG	4 cut(s)	794, 951, 1194, 1237
GlaI	GCGC	5 cut(s)	19, 76, 395, 601, 1130
GluI	GCNGC	3 cut(s)	603, 1071, 1074
GsuI	CTGGAG	1 cut(s)	644
HaeII	RGCGCY	2 cut(s)	21, 603
HaeIII	GGCC	5 cut(s)	8, 59, 771, 913, 1011
HapII	CCGG	4 cut(s)	48, 136, 192, 214
HgaI	GACGC	2 cut(s)	131, 235
HhaI	GCGC	5 cut(s)	20, 77, 396, 602, 1131
Hin1I	GRCGYC	1 cut(s)	18
Hin1II	CATG	7 cut(s)	302, 311, 527, 584, 770, 831, 999
Hin6I	GCGC	5 cut(s)	18, 75, 394, 600, 1129
HinP1I	GCGC	5 cut(s)	18, 75, 394, 600, 1129
HindIII	AAGCTT	1 cut(s)	335
HinfI	GANTC	5 cut(s)	363, 520, 608, 655, 1059
HpaII	CCGG	4 cut(s)	48, 136, 192, 214
Hpy166II	GTNNAC	2 cut(s)	257, 666
Hpy188I	TCNGA	4 cut(s)	268, 481, 654, 1113
Hpy188III	TCNNGA	5 cut(s)	142, 367, 517, 524, 541
Hpy8I	GTNNAC	2 cut(s)	257, 666
Hpy99I	CGWCG	1 cut(s)	41
HpyAV	CCTTC	4 cut(s)	408, 521, 815, 1133
HpyCH4III	ACNGT	7 cut(s)	105, 198, 281, 716, 757, 844, 866
HpyCH4IV	ACGT	3 cut(s)	688, 1044, 1173
HpyCH4V	TGCA	9 cut(s)	332, 473, 584, 698, 827, 831, 995, 1087, 1208
HpyF10VI	GCNNNNNNNGC	2 cut(s)	136, 329
HpyF3I	CTNAG	6 cut(s)	131, 218, 267, 389, 478, 915
HpySE526I	ACGT	3 cut(s)	688, 1044, 1173
Hsp92I	GRCGYC	1 cut(s)	18
Hsp92II	CATG	7 cut(s)	302, 311, 527, 584, 770, 831, 999
HspAI	GCGC	5 cut(s)	18, 75, 394, 600, 1129
KasI	GGCGCC	1 cut(s)	17
KroI	GCCGGC	2 cut(s)	135, 213
KroNI	GCCGGC	2 cut(s)	137, 215
Kzo9I	GATC	2 cut(s)	174, 874
LmnI	GCTCC	1 cut(s)	168
Lsp1109I	GCAGC	3 cut(s)	589, 1060, 1082
LweI	GCATC	2 cut(s)	482, 1023
MaeI	CTAG	4 cut(s)	794, 951, 1194, 1237
MaeII	ACGT	3 cut(s)	688, 1044, 1173
MaeIII	GTNAC	1 cut(s)	860
MalI	GATC	2 cut(s)	176, 876
MboI	GATC	2 cut(s)	174, 874
MboII	GAAGA	7 cut(s)	284, 287, 332, 458, 494, 543, 1155
MhlI	GDGCHC	3 cut(s)	84, 596, 1044
MluCI	AATT	7 cut(s)	163, 186, 327, 379, 619, 879, 959
Mly113I	GGCGCC	1 cut(s)	18
MlyI	GAGTC	3 cut(s)	514, 649, 1068
MmeI	TCCRAC	1 cut(s)	677
Mph1103I	ATGCAT	1 cut(s)	475
MroNI	GCCGGC	2 cut(s)	135, 213
MseI	TTAA	3 cut(s)	420, 962, 1002
MslI	CAYNNNNRTG	1 cut(s)	1112
MspA1I	CMGCKG	1 cut(s)	1073
MspI	CCGG	4 cut(s)	48, 136, 192, 214
MspR9I	CCNGG	5 cut(s)	48, 192, 345, 432, 1187
Mva1269I	GAATGC	1 cut(s)	889
MvaI	CCWGG	3 cut(s)	345, 432, 1187
MvnI	CGCG	1 cut(s)	125
MwoI	GCNNNNNNNGC	2 cut(s)	136, 329
NaeI	GCCGGC	2 cut(s)	137, 215
NarI	GGCGCC	1 cut(s)	18
NciI	CCSGG	2 cut(s)	48, 192
NcoI	CCATGG	1 cut(s)	307
NdeI	CATATG	1 cut(s)	1125
NdeII	GATC	2 cut(s)	174, 874
NgoMIV	GCCGGC	2 cut(s)	135, 213
NlaIII	CATG	7 cut(s)	302, 311, 527, 584, 770, 831, 999
NlaIV	GGNNCC	9 cut(s)	9, 19, 52, 102, 170, 780, 846, 912, 1191
NmeAIII	GCCGAG	2 cut(s)	85, 661
NmuCI	GTSAC	1 cut(s)	860
NsiI	ATGCAT	1 cut(s)	475
NspI	RCATGY	2 cut(s)	302, 831
PaeI	GCATGC	1 cut(s)	831
PagI	TCATGA	1 cut(s)	523
PctI	GAATGC	1 cut(s)	889
PdiI	GCCGGC	2 cut(s)	137, 215
PfeI	GAWTC	2 cut(s)	363, 608
PflMI	CCANNNNNTGG	1 cut(s)	767
PfoI	TCCNGGA	1 cut(s)	190
PkrI	GCNGC	3 cut(s)	604, 1072, 1075
PleI	GAGTC	3 cut(s)	514, 649, 1067
PluTI	GGCGCC	1 cut(s)	21
PmaCI	CACGTG	1 cut(s)	689
PmlI	CACGTG	1 cut(s)	689
PpsI	GAGTC	3 cut(s)	514, 649, 1067
Ppu21I	YACGTR	2 cut(s)	689, 1045
PshAI	GACNNNNGTC	1 cut(s)	106
PshBI	ATTAAT	1 cut(s)	962
PsiI	TTATAA	1 cut(s)	711
Psp6I	CCWGG	3 cut(s)	343, 430, 1185
PspCI	CACGTG	1 cut(s)	689
PspGI	CCWGG	3 cut(s)	343, 430, 1185
PspN4I	GGNNCC	9 cut(s)	9, 19, 52, 102, 170, 780, 846, 912, 1191
PspPI	GGNCC	6 cut(s)	7, 101, 428, 770, 778, 911
PvuII	CAGCTG	1 cut(s)	1073
RseI	CAYNNNNRTG	1 cut(s)	1112
SaqAI	TTAA	3 cut(s)	420, 962, 1002
SatI	GCNGC	3 cut(s)	603, 1071, 1074
Sau3AI	GATC	2 cut(s)	174, 874
Sau96I	GGNCC	6 cut(s)	7, 101, 428, 770, 778, 911
SchI	GAGTC	3 cut(s)	514, 649, 1068
ScrFI	CCNGG	5 cut(s)	48, 192, 345, 432, 1187
SduI	GDGCHC	3 cut(s)	84, 596, 1044
SfaNI	GCATC	2 cut(s)	482, 1023
SfoI	GGCGCC	1 cut(s)	19
SinI	GGWCC	3 cut(s)	101, 428, 778
SmiMI	CAYNNNNRTG	1 cut(s)	1112
SmlI	CTYRAG	1 cut(s)	1013
SmoI	CTYRAG	1 cut(s)	1013
SphI	GCATGC	1 cut(s)	831
Sse9I	AATT	7 cut(s)	163, 186, 327, 379, 619, 879, 959
SsiI	CCGC	2 cut(s)	43, 125
SspDI	GGCGCC	1 cut(s)	17
SspMI	CTAG	4 cut(s)	794, 951, 1194, 1237
StyD4I	CCNGG	5 cut(s)	46, 190, 343, 430, 1185
StyI	CCWWGG	1 cut(s)	307
TaaI	ACNGT	7 cut(s)	105, 198, 281, 716, 757, 844, 866
TaiI	ACGT	3 cut(s)	691, 1047, 1176
TaqI	TCGA	2 cut(s)	567, 877
TasI	AATT	7 cut(s)	163, 186, 327, 379, 619, 879, 959
TfiI	GAWTC	2 cut(s)	363, 608
Tru1I	TTAA	3 cut(s)	420, 962, 1002
Tru9I	TTAA	3 cut(s)	420, 962, 1002
TscAI	CASTG	2 cut(s)	84, 687
TseFI	GTSAC	1 cut(s)	860
TseI	GCWGC	3 cut(s)	602, 1070, 1073
Tsp45I	GTSAC	1 cut(s)	860
TspDTI	ATGAA	4 cut(s)	501, 540, 729, 1130
TspGWI	ACGGA	3 cut(s)	375, 992, 1184
TspRI	CASTG	2 cut(s)	84, 687
Van91I	CCANNNNNTGG	1 cut(s)	767
VpaK11BI	GGWCC	3 cut(s)	101, 428, 778
VspI	ATTAAT	1 cut(s)	962
XapI	RAATTY	2 cut(s)	186, 379
XceI	RCATGY	2 cut(s)	302, 831
XspI	CTAG	4 cut(s)	794, 951, 1194, 1237
Zsp2I	ATGCAT	1 cut(s)	475

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.