Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0011594

Physical Location & Seq

Genomic Coordinates Reverse (-)

25737101 .. 25740448

Gene Structure 3348 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1148600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGGGTTCCAGAATCGTACCCTGTTCTAAGAGCTGGCAGAGCACGATGCAGATTTCAGCACCAGTTTCTTCTTCTTCGTCGAAAGCGTCGTGGGTTTCGGTTTCTTTCCCTTCTGTGACAAAACCATGTGGAAGAAGCAGTGGAGCTCTGGGTTGCGGGTTCGTTCGTTGGTTAAACTCTTCCGGGTCGGGTGATTTGAAACGTCGACGTACTTCGAACCAGTCTTGCAGATCAAAGTTTGATGATTTCTCGTACGAAGAATTGTCGAACCAGATTGAGGGATTGGCGCAAAGGTTCAATCTTTCCGAGGACGGTGACGAGAACGTCGAGGAACCGGCTTTTGTGGCGTCGAAGACCTCGAATATCTCTCCGATTTTGACTTACCCAGAAGGCGAAAACAGCAAAGGCGGCGGCTTTTCGACGCGGTTTTCAAGCTTCAAGTTCAGTGCGTTGGAACCCTCTCTGCTCGGGATTCATCCGGAGCCGCCGGACTGGCCGGAGAGAAGCGAAATCGTCAGAACCGCCATGGAAAGAAAGGCCAACAGCCTCGAGTTTCCGGTTTCGCTCCGGCTAATCAAGAAGAAGCAGCGGCAGCAAAGGGAAGAGGGTCCTAAAGGAGGAGCAGGGGAGATTACTTCTTGCTCCCTGAACAAGGCATTCTCTTCCATGGTGTTTATAATCCATGAGCTCCATAGCCACGCTTTGAGTATAAGGGAAAGTTTGTACTCTGAAGATTTGCAGGAGGTGATAGCGACGGTGCAGAAGAGAGAGATGAGCATGTCATTTGTATGGTTGTTCCAGCAGGTGTTTTCGGGGTCGCCGACTTTGATGGTTTACGTGATGATCTTGCTGGCGAATTTCAGTGTGTATTCGATGAATTGCAATGTTGTTGCTGCAGCACCTCTGCCTGTTATGGCCGAGACTTTGACCGAGACTGAGACAGAGGAACAACCCTACTCGAAACCCGATTATATTTCCGATAACGATTCTACTAGGGTTGTGAAAAAGACCTCGAATGAGGGCAGTAAGGCCGATTTTCTTGACAATGTGACCTCGGAAAGTTCAATCAGGCATGCCATTGTTGATCTTGAGAAGATGTATGGTGTCTCCTTGTTCAATGATAAGGAGTTCACTGCAGAGGAGGATGTGAAGTTGTGGAACTCTGTGATGGAGGAAGCTTCGAGAAGGCAGTCAGAAATGAGGGATGAGGCTCTTGATCACGCAACGGTGCAGCAATTCGTGTCACCGATAACTGTGAATATCGAACCGGATTATCATGAGCACTACTTTAGGACTGACCTTTTGTACCAGATGGGTTTAGCTCAGGATCCTCAGAATGCACTTCTGCTCTCAAACTATGCACAATTCCTCCATGTCGTGGCTCGCGATCACGATAGGGCCGAGGAGTGCTTCAGGCGTGCCGTGCAAGGGGAGAAACCAGACGCTGAGGCTTTGATCCGGTACGCGGACTTCTTGTGGATAGTAAGGAAAGACCTGTGGGGTGCAGAAGAGAGATACCAGCAAGCAGTGGCAGAGGAGCCAGACAATCCCTATTACGCCTCCAGATATGCCAATTTCCTCTGGAGCACTGGCGCCGAAGATACTTGCTTCCCTCTCAGTACATCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

543

Amino Acids

61.03

Weight (kDa)

5.06

Isoelectric Point (pI)

59.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011594)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g24140 FvH4_7g24140 FvH4_7g24140 FvH4_7g24140
malus_domestica	MD01G1148600.v1.1 MD07G1215600.v1.1
prunus_persica	Prupe.2G247500_v2.0.a1
pyrus_communis	pycom07g19790
rosa_chinensis	RchiOBHm_Chr1g0369571
rosa_laevigata	RLG00000027118
rosa_multiflora	Rmu_sc0001154.1_g000004
rosa_roxburghii	Rroxscaffold_4G00287520
rosa_rugosa	Rorug01G0351200 Rorug01G0351300 Rorug01G0351400
rosa_samantha	Rh1AG359500 Rh1BG323200 Rh1CG336500 Rh1DG354000
rosa_wichuraiana	Rw1G031680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	677
AarI	CACCTGC	1 cut(s)	793
AasI	GACNNNNNNGTC	1 cut(s)	323
Acc36I	ACCTGC	1 cut(s)	793
AccB1I	GGYRCC	1 cut(s)	1592
AccB7I	CCANNNNNTGG	1 cut(s)	1378
AccI	GTMKAC	1 cut(s)	205
AccII	CGCG	3 cut(s)	424, 1386, 1466
AccIII	TCCGGA	1 cut(s)	478
AciI	CCGC	8 cut(s)	156, 408, 411, 424, 485, 522, 589, 1466
AclWI	GGATC	3 cut(s)	1322, 1335, 1450
AcoI	YGGCCR	2 cut(s)	494, 915
AcsI	RAATTY	1 cut(s)	856
AcuI	CTGAAG	2 cut(s)	750, 1396
AcyI	GRCGYC	2 cut(s)	347, 1593
AfaI	GTAC	7 cut(s)	18, 211, 254, 725, 1307, 1463, 1621
AfiI	CCNNNNNNNGG	6 cut(s)	277, 617, 652, 1378, 1428, 1465
AgsI	TTSAA	6 cut(s)	199, 298, 432, 439, 1065, 1117
AluBI	AGCT	6 cut(s)	33, 146, 435, 688, 1178, 1322
AluI	AGCT	6 cut(s)	33, 146, 435, 688, 1178, 1322
Alw21I	GWGCWC	5 cut(s)	44, 148, 690, 1284, 1589
Alw26I	GTCTC	4 cut(s)	914, 926, 932, 1111
AlwI	GGATC	3 cut(s)	1322, 1335, 1450
AlwNI	CAGNNNCTG	1 cut(s)	1445
Ama87I	CYCGRG	2 cut(s)	467, 548
Aor13HI	TCCGGA	1 cut(s)	478
AoxI	GGCC	5 cut(s)	494, 537, 915, 1029, 1398
ApeKI	GCWGC	5 cut(s)	586, 592, 893, 896, 1231
ApoI	RAATTY	1 cut(s)	856
ArsI	GACNNNNNNTTYG	2 cut(s)	1285, 1317
AspLEI	GCGC	2 cut(s)	289, 1595
AspS9I	GGNCC	2 cut(s)	608, 1398
AsuC2I	CCSGG	1 cut(s)	184
AsuHPI	GGTGA	4 cut(s)	203, 326, 757, 1236
AsuII	TTCGAA	1 cut(s)	215
AvaI	CYCGRG	2 cut(s)	467, 548
AvaII	GGWCC	1 cut(s)	608
BamHI	GGATCC	1 cut(s)	1327
BanI	GGYRCC	1 cut(s)	1592
BanII	GRGCYC	2 cut(s)	148, 690
BarI	GAAGNNNNNNTAC	2 cut(s)	1454, 1486
BbsI	GAAGAC	1 cut(s)	359
Bbv12I	GWGCWC	5 cut(s)	44, 148, 690, 1284, 1589
BbvCI	CCTCAGC	1 cut(s)	1446
BbvI	GCAGC	5 cut(s)	598, 604, 880, 908, 1243
BccI	CCATC	3 cut(s)	823, 1162, 1306
BceAI	ACGGC	1 cut(s)	1406
BclI	TGATCA	1 cut(s)	1216
BcnI	CCSGG	1 cut(s)	184
BcoDI	GTCTC	4 cut(s)	914, 926, 932, 1111
BfaI	CTAG	2 cut(s)	993, 1627
BfmI	CTRYAG	2 cut(s)	894, 1134
BfoI	RGCGCY	1 cut(s)	1596
BfuAI	ACCTGC	1 cut(s)	793
BglI	GCCNNNNNGGC	1 cut(s)	493
BisI	GCNGC	9 cut(s)	409, 412, 485, 587, 590, 593, 894, 897, 1232
BlsI	GCNGC	9 cut(s)	410, 413, 486, 588, 591, 594, 895, 898, 1233
Bme1390I	CCNGG	1 cut(s)	184
Bme18I	GGWCC	1 cut(s)	608
BmeT110I	CYCGRG	2 cut(s)	467, 548
BmgT120I	GGNCC	2 cut(s)	608, 1398
BmiI	GGNNCC	8 cut(s)	7, 333, 456, 483, 609, 1329, 1539, 1594
BmrFI	CCNGG	1 cut(s)	184
BmsI	GCATC	1 cut(s)	36
BpiI	GAAGAC	1 cut(s)	359
BpmI	CTGGAG	2 cut(s)	1546, 1603
Bpu10I	CCTNAGC	2 cut(s)	1323, 1446
Bpu14I	TTCGAA	1 cut(s)	215
BpuEI	CTTGAG	1 cut(s)	1109
BpuMI	CCSGG	1 cut(s)	184
BsaAI	YACGTR	1 cut(s)	838
BsaHI	GRCGYC	2 cut(s)	347, 1593
BsaJI	CCNNGG	5 cut(s)	306, 525, 666, 1053, 1401
BsaWI	WCCGGW	4 cut(s)	478, 556, 1267, 1458
BsaXI	ACNNNNNCTCC	2 cut(s)	1353, 1383
Bsc4I	CCNNNNNNNGG	6 cut(s)	277, 617, 652, 1378, 1428, 1465
Bse118I	RCCGGY	1 cut(s)	334
Bse1I	ACTGG	4 cut(s)	62, 220, 497, 1594
Bse3DI	GCAATG	1 cut(s)	889
BseAI	TCCGGA	1 cut(s)	478
BseDI	CCNNGG	5 cut(s)	306, 525, 666, 1053, 1401
BseGI	GGATG	4 cut(s)	475, 1150, 1210, 1622
BseLI	CCNNNNNNNGG	6 cut(s)	277, 617, 652, 1378, 1428, 1465
BseMI	GCAATG	1 cut(s)	889
BseMII	CTCAG	4 cut(s)	927, 1337, 1346, 1437
BseNI	ACTGG	4 cut(s)	62, 220, 497, 1594
BseRI	GAGGAG	4 cut(s)	633, 1154, 1418, 1550
BseXI	GCAGC	5 cut(s)	598, 604, 880, 908, 1243
BsgI	GTGCAG	3 cut(s)	779, 1250, 1524
Bsh1236I	CGCG	3 cut(s)	424, 1386, 1466
BshFI	GGCC	5 cut(s)	496, 539, 917, 1031, 1400
BshNI	GGYRCC	1 cut(s)	1592
BsiHKAI	GWGCWC	5 cut(s)	44, 148, 690, 1284, 1589
BsiHKCI	CYCGRG	2 cut(s)	467, 548
BsiSI	CCGG	9 cut(s)	183, 335, 479, 488, 497, 557, 568, 1268, 1459
BsiWI	CGTACG	1 cut(s)	252
BslI	CCNNNNNNNGG	6 cut(s)	277, 617, 652, 1378, 1428, 1465
BsmAI	GTCTC	4 cut(s)	914, 926, 932, 1111
BsmI	GAATGC	2 cut(s)	656, 1342
BsnI	GGCC	5 cut(s)	496, 539, 917, 1031, 1400
BsoBI	CYCGRG	2 cut(s)	467, 548
Bsp119I	TTCGAA	1 cut(s)	215
Bsp1286I	GDGCHC	5 cut(s)	44, 148, 690, 1284, 1589
Bsp13I	TCCGGA	1 cut(s)	478
Bsp143I	GATC	7 cut(s)	230, 843, 1084, 1216, 1327, 1387, 1455
Bsp19I	CCATGG	2 cut(s)	525, 666
Bsp68I	TCGCGA	1 cut(s)	1386
BspACI	CCGC	8 cut(s)	156, 408, 411, 424, 485, 522, 589, 1466
BspANI	GGCC	5 cut(s)	496, 539, 917, 1031, 1400
BspCNI	CTCAG	5 cut(s)	928, 1336, 1345, 1438, 1629
BspEI	TCCGGA	1 cut(s)	478
BspFNI	CGCG	3 cut(s)	424, 1386, 1466
BspHI	TCATGA	1 cut(s)	1276
BspLI	GGNNCC	8 cut(s)	7, 333, 456, 483, 609, 1329, 1539, 1594
BspMAI	CTGCAG	2 cut(s)	898, 1138
BspMI	ACCTGC	1 cut(s)	793
BspPI	GGATC	3 cut(s)	1322, 1335, 1450
BspT104I	TTCGAA	1 cut(s)	215
BspT107I	GGYRCC	1 cut(s)	1592
BsrDI	GCAATG	1 cut(s)	889
BsrFI	RCCGGY	1 cut(s)	334
BsrI	ACTGG	4 cut(s)	62, 220, 497, 1594
BssAI	RCCGGY	1 cut(s)	334
BssECI	CCNNGG	5 cut(s)	306, 525, 666, 1053, 1401
BssMI	GATC	7 cut(s)	230, 843, 1084, 1216, 1327, 1387, 1455
BssNI	GRCGYC	2 cut(s)	347, 1593
BssT1I	CCWWGG	2 cut(s)	525, 666
Bst4CI	ACNGT	4 cut(s)	314, 757, 1228, 1255
Bst6I	CTCTTC	5 cut(s)	184, 597, 667, 758, 1503
BstACI	GRCGYC	2 cut(s)	347, 1593
BstBAI	YACGTR	1 cut(s)	838
BstBI	TTCGAA	1 cut(s)	215
BstC8I	GCNNGC	6 cut(s)	35, 852, 1074, 1384, 1419, 1524
BstDEI	CTNAG	6 cut(s)	27, 936, 1323, 1332, 1446, 1616
BstDSI	CCRYGG	2 cut(s)	525, 666
BstENI	CCTNNNNNAGG	2 cut(s)	615, 650
BstF5I	GGATG	4 cut(s)	475, 1150, 1210, 1622
BstFNI	CGCG	3 cut(s)	424, 1386, 1466
BstH2I	RGCGCY	1 cut(s)	1596
BstHHI	GCGC	2 cut(s)	289, 1595
BstKTI	GATC	7 cut(s)	233, 846, 1087, 1219, 1330, 1390, 1458
BstMAI	GTCTC	4 cut(s)	914, 926, 932, 1111
BstMBI	GATC	7 cut(s)	230, 843, 1084, 1216, 1327, 1387, 1455
BstMWI	GCNNNNNNNGC	7 cut(s)	39, 344, 399, 408, 493, 592, 1423
BstNSI	RCATGY	2 cut(s)	781, 1076
BstSCI	CCNGG	1 cut(s)	182
BstSFI	CTRYAG	2 cut(s)	894, 1134
BstUI	CGCG	3 cut(s)	424, 1386, 1466
BstV1I	GCAGC	5 cut(s)	598, 604, 880, 908, 1243
BstV2I	GAAGAC	1 cut(s)	359
BstX2I	RGATCY	1 cut(s)	1327
BstYI	RGATCY	1 cut(s)	1327
BsuRI	GGCC	5 cut(s)	496, 539, 917, 1031, 1400
BtgI	CCRYGG	2 cut(s)	525, 666
BtsCI	GGATG	4 cut(s)	475, 1150, 1210, 1622
BtsI	GCAGTG	3 cut(s)	145, 1131, 1533
BtsIMutI	CAGTG	6 cut(s)	145, 451, 868, 1131, 1533, 1587
BtuMI	TCGCGA	1 cut(s)	1386
BveI	ACCTGC	1 cut(s)	793
Cac8I	GCNNGC	6 cut(s)	35, 852, 1074, 1384, 1419, 1524
CaiI	CAGNNNCTG	1 cut(s)	1445
CciI	TCATGA	1 cut(s)	1276
CfoI	GCGC	2 cut(s)	289, 1595
Cfr10I	RCCGGY	1 cut(s)	334
Cfr13I	GGNCC	2 cut(s)	608, 1398
CseI	GACGC	4 cut(s)	75, 336, 430, 1451
Csp6I	GTAC	7 cut(s)	17, 210, 253, 724, 1306, 1462, 1620
CviAII	CATG	8 cut(s)	126, 526, 667, 683, 778, 1073, 1277, 1373
CviQI	GTAC	7 cut(s)	17, 210, 253, 724, 1306, 1462, 1620
DdeI	CTNAG	6 cut(s)	27, 936, 1323, 1332, 1446, 1616
DinI	GGCGCC	1 cut(s)	1594
DpnI	GATC	7 cut(s)	232, 845, 1086, 1218, 1329, 1389, 1457
DpnII	GATC	7 cut(s)	230, 843, 1084, 1216, 1327, 1387, 1455
DrdI	GACNNNNNNGTC	1 cut(s)	323
DseDI	GACNNNNNNGTC	1 cut(s)	323
EaeI	YGGCCR	2 cut(s)	494, 915
Eam1104I	CTCTTC	5 cut(s)	184, 597, 667, 758, 1503
EarI	CTCTTC	5 cut(s)	184, 597, 667, 758, 1503
Ecl136II	GAGCTC	2 cut(s)	146, 688
Eco130I	CCWWGG	2 cut(s)	525, 666
Eco24I	GRGCYC	2 cut(s)	148, 690
Eco47I	GGWCC	1 cut(s)	608
Eco53kI	GAGCTC	2 cut(s)	146, 688
Eco57I	CTGAAG	2 cut(s)	750, 1396
Eco88I	CYCGRG	2 cut(s)	467, 548
EcoICRI	GAGCTC	2 cut(s)	146, 688
EcoNI	CCTNNNNNAGG	2 cut(s)	615, 650
EcoO109I	RGGNCCY	1 cut(s)	608
EcoT14I	CCWWGG	2 cut(s)	525, 666
EcoT38I	GRGCYC	2 cut(s)	148, 690
EgeI	GGCGCC	1 cut(s)	1594
EheI	GGCGCC	1 cut(s)	1594
ErhI	CCWWGG	2 cut(s)	525, 666
FaeI	CATG	8 cut(s)	129, 529, 670, 686, 781, 1076, 1280, 1376
FatI	CATG	8 cut(s)	125, 525, 666, 682, 777, 1072, 1276, 1372
FauI	CCCGC	1 cut(s)	149
FbaI	TGATCA	1 cut(s)	1216
FblI	GTMKAC	1 cut(s)	205
Fnu4HI	GCNGC	9 cut(s)	409, 412, 485, 587, 590, 593, 894, 897, 1232
FokI	GGATG	4 cut(s)	462, 1157, 1217, 1609
FriOI	GRGCYC	2 cut(s)	148, 690
Fsp4HI	GCNGC	9 cut(s)	409, 412, 485, 587, 590, 593, 894, 897, 1232
FspBI	CTAG	2 cut(s)	993, 1627
GlaI	GCGC	2 cut(s)	288, 1594
GluI	GCNGC	9 cut(s)	409, 412, 485, 587, 590, 593, 894, 897, 1232
GsuI	CTGGAG	2 cut(s)	1546, 1603
HaeII	RGCGCY	1 cut(s)	1596
HaeIII	GGCC	5 cut(s)	496, 539, 917, 1031, 1400
HapII	CCGG	9 cut(s)	183, 335, 479, 488, 497, 557, 568, 1268, 1459
HgaI	GACGC	4 cut(s)	75, 336, 430, 1451
HhaI	GCGC	2 cut(s)	289, 1595
Hin1I	GRCGYC	2 cut(s)	347, 1593
Hin1II	CATG	8 cut(s)	129, 529, 670, 686, 781, 1076, 1280, 1376
Hin6I	GCGC	2 cut(s)	287, 1593
HinP1I	GCGC	2 cut(s)	287, 1593
HincII	GTYRAC	1 cut(s)	206
HindII	GTYRAC	1 cut(s)	206
HindIII	AAGCTT	2 cut(s)	433, 1176
HinfI	GANTC	3 cut(s)	12, 472, 986
HpaII	CCGG	9 cut(s)	183, 335, 479, 488, 497, 557, 568, 1268, 1459
HphI	GGTGA	4 cut(s)	203, 326, 757, 1236
Hpy166II	GTNNAC	3 cut(s)	206, 835, 1131
Hpy188I	TCNGA	8 cut(s)	307, 372, 518, 730, 979, 1057, 1195, 1335
Hpy8I	GTNNAC	3 cut(s)	206, 835, 1131
Hpy99I	CGWCG	8 cut(s)	82, 91, 207, 210, 329, 352, 424, 757
HpyAV	CCTTC	3 cut(s)	120, 383, 1179
HpyCH4III	ACNGT	4 cut(s)	314, 757, 1228, 1255
HpyCH4IV	ACGT	4 cut(s)	202, 208, 324, 837
HpyF10VI	GCNNNNNNNGC	7 cut(s)	39, 344, 399, 408, 493, 592, 1423
HpyF3I	CTNAG	6 cut(s)	27, 936, 1323, 1332, 1446, 1616
HpySE526I	ACGT	4 cut(s)	202, 208, 324, 837
Hsp92I	GRCGYC	2 cut(s)	347, 1593
Hsp92II	CATG	8 cut(s)	129, 529, 670, 686, 781, 1076, 1280, 1376
HspAI	GCGC	2 cut(s)	287, 1593
KasI	GGCGCC	1 cut(s)	1592
Kpn2I	TCCGGA	1 cut(s)	478
Ksp22I	TGATCA	1 cut(s)	1216
Kzo9I	GATC	7 cut(s)	230, 843, 1084, 1216, 1327, 1387, 1455
LmnI	GCTCC	8 cut(s)	143, 481, 570, 620, 647, 693, 1537, 1584
Lsp1109I	GCAGC	5 cut(s)	598, 604, 880, 908, 1243
LweI	GCATC	1 cut(s)	36
MaeI	CTAG	2 cut(s)	993, 1627
MaeII	ACGT	4 cut(s)	202, 208, 324, 837
MaeIII	GTNAC	4 cut(s)	115, 314, 1048, 1242
MalI	GATC	7 cut(s)	232, 845, 1086, 1218, 1329, 1389, 1457
MboI	GATC	7 cut(s)	230, 843, 1084, 1216, 1327, 1387, 1455
MflI	RGATCY	1 cut(s)	1327
MhlI	GDGCHC	5 cut(s)	44, 148, 690, 1284, 1589
MluCI	AATT	6 cut(s)	260, 856, 877, 1235, 1364, 1573
Mly113I	GGCGCC	1 cut(s)	1593
MmeI	TCCRAC	1 cut(s)	432
MroI	TCCGGA	1 cut(s)	478
MseI	TTAA	1 cut(s)	173
MslI	CAYNNNNRTG	1 cut(s)	787
MspA1I	CMGCKG	1 cut(s)	589
MspI	CCGG	9 cut(s)	183, 335, 479, 488, 497, 557, 568, 1268, 1459
MspR9I	CCNGG	1 cut(s)	184
Mva1269I	GAATGC	2 cut(s)	656, 1342
MvnI	CGCG	3 cut(s)	424, 1386, 1466
MwoI	GCNNNNNNNGC	7 cut(s)	39, 344, 399, 408, 493, 592, 1423
NarI	GGCGCC	1 cut(s)	1593
NciI	CCSGG	1 cut(s)	184
NcoI	CCATGG	2 cut(s)	525, 666
NdeII	GATC	7 cut(s)	230, 843, 1084, 1216, 1327, 1387, 1455
NlaIII	CATG	8 cut(s)	129, 529, 670, 686, 781, 1076, 1280, 1376
NlaIV	GGNNCC	8 cut(s)	7, 333, 456, 483, 609, 1329, 1539, 1594
NmeAIII	GCCGAG	2 cut(s)	943, 1426
NmuCI	GTSAC	4 cut(s)	115, 314, 1048, 1242
NruI	TCGCGA	1 cut(s)	1386
NspI	RCATGY	2 cut(s)	781, 1076
NspV	TTCGAA	1 cut(s)	215
PaeI	GCATGC	1 cut(s)	1076
PaeR7I	CTCGAG	1 cut(s)	548
PagI	TCATGA	1 cut(s)	1276
PaqCI	CACCTGC	1 cut(s)	793
PcsI	WCGNNNNNNNCGW	7 cut(s)	83, 86, 324, 356, 818, 1383, 1398
PctI	GAATGC	2 cut(s)	656, 1342
PfeI	GAWTC	3 cut(s)	12, 472, 986
Pfl23II	CGTACG	1 cut(s)	252
PflMI	CCANNNNNTGG	1 cut(s)	1378
PkrI	GCNGC	9 cut(s)	410, 413, 486, 588, 591, 594, 895, 898, 1233
PluTI	GGCGCC	1 cut(s)	1596
Ppu21I	YACGTR	1 cut(s)	838
PpuMI	RGGWCCY	1 cut(s)	608
PsiI	TTATAA	1 cut(s)	677
Psp124BI	GAGCTC	2 cut(s)	148, 690
Psp5II	RGGWCCY	1 cut(s)	608
PspLI	CGTACG	1 cut(s)	252
PspN4I	GGNNCC	8 cut(s)	7, 333, 456, 483, 609, 1329, 1539, 1594
PspPI	GGNCC	2 cut(s)	608, 1398
PspPPI	RGGWCCY	1 cut(s)	608
PspXI	VCTCGAGB	1 cut(s)	548
PstI	CTGCAG	2 cut(s)	898, 1138
PstNI	CAGNNNCTG	1 cut(s)	1445
PsuI	RGATCY	1 cut(s)	1327
RruI	TCGCGA	1 cut(s)	1386
RsaI	GTAC	7 cut(s)	18, 211, 254, 725, 1307, 1463, 1621
RsaNI	GTAC	7 cut(s)	17, 210, 253, 724, 1306, 1462, 1620
RseI	CAYNNNNRTG	1 cut(s)	787
SacI	GAGCTC	2 cut(s)	148, 690
SalI	GTCGAC	1 cut(s)	204
SaqAI	TTAA	1 cut(s)	173
SatI	GCNGC	9 cut(s)	409, 412, 485, 587, 590, 593, 894, 897, 1232
Sau3AI	GATC	7 cut(s)	230, 843, 1084, 1216, 1327, 1387, 1455
Sau96I	GGNCC	2 cut(s)	608, 1398
ScrFI	CCNGG	1 cut(s)	184
SduI	GDGCHC	5 cut(s)	44, 148, 690, 1284, 1589
SfaNI	GCATC	1 cut(s)	36
SfcI	CTRYAG	2 cut(s)	894, 1134
SfoI	GGCGCC	1 cut(s)	1594
Sfr274I	CTCGAG	1 cut(s)	548
SfuI	TTCGAA	1 cut(s)	215
SgrDI	CGTCGACG	1 cut(s)	204
SinI	GGWCC	1 cut(s)	608
SlaI	CTCGAG	1 cut(s)	548
SmiMI	CAYNNNNRTG	1 cut(s)	787
SmlI	CTYRAG	2 cut(s)	548, 1088
SmoI	CTYRAG	2 cut(s)	548, 1088
SphI	GCATGC	1 cut(s)	1076
Sse9I	AATT	6 cut(s)	260, 856, 877, 1235, 1364, 1573
SsiI	CCGC	8 cut(s)	156, 408, 411, 424, 485, 522, 589, 1466
SspDI	GGCGCC	1 cut(s)	1592
SspMI	CTAG	2 cut(s)	993, 1627
SstI	GAGCTC	2 cut(s)	148, 690
StyD4I	CCNGG	1 cut(s)	182
StyI	CCWWGG	2 cut(s)	525, 666
TaaI	ACNGT	4 cut(s)	314, 757, 1228, 1255
TaiI	ACGT	4 cut(s)	205, 211, 327, 840
TaqII	GACCGA	1 cut(s)	944
TasI	AATT	6 cut(s)	260, 856, 877, 1235, 1364, 1573
TatI	WGTACW	2 cut(s)	723, 1619
TauI	GCSGC	4 cut(s)	411, 414, 487, 592
TfiI	GAWTC	3 cut(s)	12, 472, 986
Tru1I	TTAA	1 cut(s)	173
Tru9I	TTAA	1 cut(s)	173
TscAI	CASTG	6 cut(s)	145, 451, 868, 1138, 1533, 1594
TseFI	GTSAC	4 cut(s)	115, 314, 1048, 1242
TseI	GCWGC	5 cut(s)	586, 592, 893, 896, 1231
Tsp45I	GTSAC	4 cut(s)	115, 314, 1048, 1242
TspDTI	ATGAA	2 cut(s)	464, 890
TspRI	CASTG	6 cut(s)	145, 451, 868, 1138, 1533, 1594
Van91I	CCANNNNNTGG	1 cut(s)	1378
VpaK11BI	GGWCC	1 cut(s)	608
XagI	CCTNNNNNAGG	2 cut(s)	615, 650
XapI	RAATTY	1 cut(s)	856
XceI	RCATGY	2 cut(s)	781, 1076
XhoI	CTCGAG	1 cut(s)	548
XmiI	GTMKAC	1 cut(s)	205
XspI	CTAG	2 cut(s)	993, 1627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.