Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0008639

Physical Location & Seq

Genomic Coordinates Forward (+)

26827919 .. 26830428

Gene Structure 2510 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1163200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGCTGCCGAAGCGGTTCCGGGTACACCCGGCATAAAAGAAATGAGGTCCGAAGCCGGGACGGAGTTCCGTTTTAGCAATGGTTCGGGTCATGGACATAGAGCTCCCGGGTCCCCCTGTCCGCCGGGGATAAGGAGGGTGAGTTTAAGAGCGGAGATTGATACGTCCCCGCCTTTCGGGTCGGTCGAGGAGGCTGTTACCCGTTTTGGCGGGAAGGGGTCTTGGTTACCATTCTACAAGCTCGGAGAAAACTATAATGGGGTTGAAGGGTTTGACCTAAAGAAAGTGGAGGAGCAGGCAGCAGAGCTGGAGAAGGATTTGATTGTGAAAGAACTGGAGACACTTGATGTCCTGGAGGAACTGTCAACAACGAAAAGGATCGTGGAAGAGCTAAAGCGCCAGCTGCAGAAAGAGGCGTTGAAATGCTTGACAGTCTTGCCCCCGGATTTCCATTTTGAAGAACACATTTCATCATCCCCTGCCATCAAAGAAATGGACAAGGAAAGTTATAGGACTCCGGGAAATAACCATGAACACATGATGGGAAATTCGAGTCCCTACCCGAATTCTCCTGATCTGATCTTGATGGAGTTGAAGCAAGCAAAATTGAACCTTGGTAAAACAATCAGCGATCTTGGGGTGATTCAGTCTTCTGTCGAATGTTTAAATAAGAAGATGCGAAGCGAGAAAGTGTTACTTGAAAAGACCCAGGAGAGGCTGACTTTGCAGTTTGCAGGGGTGTCGTCGCTGGAGGAGGAGATGAAGAACATTGAAGTGAAGGAACAAATAGGTGTTGATGCAGAAACAGATACTAAGAGCGGCTTTGAGAATTCAGCATTTGTTTCAAGGGAGCATATGCAGTTTAGGAATACACCGGAAACTGTGAACTTTGAAGCATCCGGGGCAATGTCTAGGAATGAGCATGCCACGAACATTATGAAGACTGCTGAAATGAGGTGGATTGCAGCTAAAAAGATGGAAGAAGCGGCAAGGGCAGCAGAGGCCGTTGCTCTTGCTGAAATCAAGGCTTTAACAAGTGGTGGGAGCTCGTCAGGATACGTCCTTCCAGAGCCCGAGAAAATGAGTTTTAGTTCTCAGATGAAATCTCCTCTAAACTCGAAAGCTCAAGAAGCTAAGGGCTTGTTCAAGAAGAAGCTAGTGGATGCCATGCGCCAAATTGATGAAGCTCATACTTCTAAACTGGCTATATTGAGGAAGCTGAAAGAAGCAACAGAAGAGGTTAAACACAGTAAGCAATTCTTGGAGGAGGCTCTGAACAAAGTAGAACTTGCGAATCGAAAGCAACTCGCTGCTGAAGAGGCTCTTCAGAGTTGGGGAACCGAGCATGATCTGAAGGGACAAGCAGCAGCTTATAACATTCGCAACCTAAACAATTTCCAATCACCAGATTATAGCCTGAACTCTCCGATGAACGGGATGAACAAGTCAGCCCTACTAAATGATGGTCCGAAGCCAGTTTTAAGGTCAACATGTTCAATGCGAGATGTACTTAGCAGGAAGCAAGTTCTCCCCGAAGATGTTGTGGCAACAAAGGAAATGGATCGCAGCCAGACTGAAACGCACAGAGGAGCTTTGATTGAAATGCTTCATGCTCTAAGGAAGGATGTAACATTTCCTTCGAAAGTCGAGAAGGATGGAAATGATCAGAAGCCGGTTTTAGCACATAGGAAGAAATTCGGGTTCATCCAGATTTCCCTTCCCTTGTCGAAGCCGAGTAAGAAAAAGATGCAAACTTCGAATGCAGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009987 GO:0016043 GO:0019750 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WEMBL

Protein Analysis

590

Amino Acids

65.5

Weight (kDa)

6.96

Isoelectric Point (pI)

52.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WEMBL	PF05701	51 - 137	2.4e-13	Weak chloroplast movement under blue light
WEMBL	PF05701	196 - 450	7.8e-23	Weak chloroplast movement under blue light

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008639)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40480 AT3G56270
fragaria_vesca	FvH4_7g25600 FvH4_7g25600
malus_domestica	MD01G1163200.v1.1 MD07G1231200.v1.1
prunus_persica	Prupe.2G261200_v2.0.a1 Prupe.2G261200_v2.0.a1
pyrus_communis	pycom01g17780 pycom07g20910
rosa_chinensis	RchiOBHm_Chr1g0371731
rosa_laevigata	RLG00000026947
rosa_multiflora	Rmu_co8082684.1_g000001 Rmu_co8220228.1_g000001 Rmu_sc0001755.1_g000055 Rmu_sc0019360.1_g000002
rosa_roxburghii	Rroxscaffold_4G00285490
rosa_rugosa	Rorug01G0365800
rosa_samantha	Rh1AG375900 Rh1BG339300 Rh1CG352400 Rh1DG370400
rosa_wichuraiana	Rw1G033070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1374
AccBSI	CCGCTC	2 cut(s)	152, 819
AciI	CCGC	7 cut(s)	14, 122, 152, 170, 210, 819, 986
AclWI	GGATC	2 cut(s)	386, 1569
AcsI	RAATTY	4 cut(s)	547, 565, 829, 1694
AcuI	CTGAAG	3 cut(s)	1310, 1335, 1373
AfaI	GTAC	2 cut(s)	25, 1509
AfiI	CCNNNNNNNGG	4 cut(s)	57, 176, 714, 1433
AflIII	ACRYGT	1 cut(s)	1490
AjnI	CCWGG	2 cut(s)	351, 708
Alw21I	GWGCWC	2 cut(s)	106, 1049
Alw26I	GTCTC	1 cut(s)	332
AlwI	GGATC	2 cut(s)	386, 1569
Ama87I	CYCGRG	2 cut(s)	107, 1073
AoxI	GGCC	1 cut(s)	1002
ApeKI	GCWGC	9 cut(s)	5, 299, 403, 965, 995, 1310, 1364, 1367, 1566
ApoI	RAATTY	4 cut(s)	547, 565, 829, 1694
Asp700I	GAANNNNTTC	3 cut(s)	15, 1605, 1694
AspLEI	GCGC	2 cut(s)	399, 1173
AspS9I	GGNCC	3 cut(s)	48, 111, 1466
AsuC2I	CCSGG	9 cut(s)	21, 30, 58, 108, 109, 126, 443, 519, 901
AsuHPI	GGTGA	3 cut(s)	151, 652, 1395
AsuII	TTCGAA	2 cut(s)	1640, 1757
AvaI	CYCGRG	2 cut(s)	107, 1073
AvaII	GGWCC	3 cut(s)	48, 111, 1466
BanII	GRGCYC	3 cut(s)	106, 1049, 1074
BbsI	GAAGAC	2 cut(s)	642, 947
Bbv12I	GWGCWC	2 cut(s)	106, 1049
BbvI	GCAGC	8 cut(s)	311, 390, 977, 1007, 1297, 1376, 1379, 1578
BccI	CCATC	6 cut(s)	491, 535, 580, 970, 1457, 1649
BceAI	ACGGC	1 cut(s)	989
BcgI	CGANNNNNNTGC	2 cut(s)	723, 757
BciT130I	CCWGG	2 cut(s)	353, 710
BciVI	GTATCC	1 cut(s)	1049
BclI	TGATCA	1 cut(s)	1663
BcnI	CCSGG	9 cut(s)	21, 30, 58, 108, 109, 126, 443, 519, 901
BcoDI	GTCTC	1 cut(s)	332
BfaI	CTAG	2 cut(s)	912, 1157
BfmI	CTRYAG	1 cut(s)	404
BfoI	RGCGCY	1 cut(s)	400
BfuI	GTATCC	1 cut(s)	1049
Bme18I	GGWCC	3 cut(s)	48, 111, 1466
BmeT110I	CYCGRG	2 cut(s)	107, 1073
BmgT120I	GGNCC	3 cut(s)	48, 111, 1466
BmiI	GGNNCC	4 cut(s)	18, 112, 113, 1339
BmsI	GCATC	5 cut(s)	666, 787, 905, 1153, 1737
BpiI	GAAGAC	2 cut(s)	642, 947
BpmI	CTGGAG	4 cut(s)	329, 356, 374, 770
Bpu10I	CCTNAGC	1 cut(s)	1134
Bpu14I	TTCGAA	2 cut(s)	1640, 1757
BpuEI	CTTGAG	1 cut(s)	1110
BpuMI	CCSGG	9 cut(s)	21, 30, 58, 108, 109, 126, 443, 519, 901
BsaJI	CCNNGG	6 cut(s)	107, 125, 441, 613, 708, 900
BsaWI	WCCGGW	1 cut(s)	874
BsaXI	ACNNNNNCTCC	4 cut(s)	127, 157, 347, 377
Bsc4I	CCNNNNNNNGG	4 cut(s)	57, 176, 714, 1433
Bse118I	RCCGGY	1 cut(s)	1672
Bse1I	ACTGG	3 cut(s)	339, 1206, 1475
Bse3DI	GCAATG	2 cut(s)	85, 912
BseBI	CCWGG	2 cut(s)	353, 710
BseDI	CCNNGG	6 cut(s)	107, 125, 441, 613, 708, 900
BseGI	GGATG	7 cut(s)	473, 896, 1168, 1443, 1630, 1660, 1704
BseLI	CCNNNNNNNGG	4 cut(s)	57, 176, 714, 1433
BseMI	GCAATG	2 cut(s)	85, 912
BseMII	CTCAG	1 cut(s)	1109
BseNI	ACTGG	3 cut(s)	339, 1206, 1475
BseRI	GAGGAG	7 cut(s)	203, 305, 767, 770, 1098, 1280, 1602
BseXI	GCAGC	8 cut(s)	311, 390, 977, 1007, 1297, 1376, 1379, 1578
Bsh1285I	CGRYCG	1 cut(s)	186
BshFI	GGCC	1 cut(s)	1004
BsiEI	CGRYCG	1 cut(s)	186
BsiHKAI	GWGCWC	2 cut(s)	106, 1049
BsiHKCI	CYCGRG	2 cut(s)	107, 1073
BslFI	GGGAC	5 cut(s)	73, 97, 151, 540, 1371
BslI	CCNNNNNNNGG	4 cut(s)	57, 176, 714, 1433
BsmAI	GTCTC	1 cut(s)	332
BsmFI	GGGAC	5 cut(s)	73, 97, 151, 540, 1371
BsmI	GAATGC	1 cut(s)	1765
BsnI	GGCC	1 cut(s)	1004
BsoBI	CYCGRG	2 cut(s)	107, 1073
Bsp119I	TTCGAA	2 cut(s)	1640, 1757
Bsp1286I	GDGCHC	3 cut(s)	106, 1049, 1074
Bsp143I	GATC	7 cut(s)	378, 574, 579, 631, 1348, 1561, 1663
BspACI	CCGC	7 cut(s)	14, 122, 152, 170, 210, 819, 986
BspANI	GGCC	1 cut(s)	1004
BspCNI	CTCAG	1 cut(s)	1108
BspLI	GGNNCC	4 cut(s)	18, 112, 113, 1339
BspMAI	CTGCAG	1 cut(s)	408
BspPI	GGATC	2 cut(s)	386, 1569
BspQI	GCTCTTC	2 cut(s)	381, 1329
BspT104I	TTCGAA	2 cut(s)	1640, 1757
BsrBI	CCGCTC	2 cut(s)	152, 819
BsrDI	GCAATG	2 cut(s)	85, 912
BsrFI	RCCGGY	1 cut(s)	1672
BsrI	ACTGG	3 cut(s)	339, 1206, 1475
BssAI	RCCGGY	1 cut(s)	1672
BssECI	CCNNGG	6 cut(s)	107, 125, 441, 613, 708, 900
BssMI	GATC	7 cut(s)	378, 574, 579, 631, 1348, 1561, 1663
BssT1I	CCWWGG	1 cut(s)	613
Bst2UI	CCWGG	2 cut(s)	353, 710
Bst4CI	ACNGT	4 cut(s)	363, 433, 883, 1250
Bst6I	CTCTTC	4 cut(s)	381, 1230, 1311, 1329
BstBI	TTCGAA	2 cut(s)	1640, 1757
BstC8I	GCNNGC	4 cut(s)	297, 401, 600, 924
BstDEI	CTNAG	5 cut(s)	813, 1095, 1134, 1511, 1616
BstEII	GGTNACC	1 cut(s)	225
BstF5I	GGATG	7 cut(s)	473, 896, 1168, 1443, 1630, 1660, 1704
BstH2I	RGCGCY	1 cut(s)	400
BstHHI	GCGC	2 cut(s)	399, 1173
BstKTI	GATC	7 cut(s)	381, 577, 582, 634, 1351, 1564, 1666
BstMAI	GTCTC	1 cut(s)	332
BstMBI	GATC	7 cut(s)	378, 574, 579, 631, 1348, 1561, 1663
BstMCI	CGRYCG	1 cut(s)	186
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 403, 724, 902, 992, 995, 1001, 1130, 1319
BstNI	CCWGG	2 cut(s)	353, 710
BstNSI	RCATGY	2 cut(s)	926, 1494
BstPI	GGTNACC	1 cut(s)	225
BstSFI	CTRYAG	1 cut(s)	404
BstV1I	GCAGC	8 cut(s)	311, 390, 977, 1007, 1297, 1376, 1379, 1578
BstV2I	GAAGAC	2 cut(s)	642, 947
BsuI	GTATCC	1 cut(s)	1049
BsuRI	GGCC	1 cut(s)	1004
BtsCI	GGATG	7 cut(s)	473, 896, 1168, 1443, 1630, 1660, 1704
BtsI	GCAGTG	1 cut(s)	1770
BtsIMutI	CAGTG	1 cut(s)	1770
Cac8I	GCNNGC	4 cut(s)	297, 401, 600, 924
CfoI	GCGC	2 cut(s)	399, 1173
Cfr10I	RCCGGY	1 cut(s)	1672
Cfr13I	GGNCC	3 cut(s)	48, 111, 1466
Cfr9I	CCCGGG	1 cut(s)	107
Csp6I	GTAC	2 cut(s)	24, 1508
CviAII	CATG	8 cut(s)	92, 530, 538, 923, 1168, 1346, 1491, 1610
CviQI	GTAC	2 cut(s)	24, 1508
DdeI	CTNAG	5 cut(s)	813, 1095, 1134, 1511, 1616
DpnI	GATC	7 cut(s)	380, 576, 581, 633, 1350, 1563, 1665
DpnII	GATC	7 cut(s)	378, 574, 579, 631, 1348, 1561, 1663
DraI	TTTAAA	1 cut(s)	666
Eam1104I	CTCTTC	4 cut(s)	381, 1230, 1311, 1329
EarI	CTCTTC	4 cut(s)	381, 1230, 1311, 1329
EciI	GGCGGA	1 cut(s)	111
Ecl136II	GAGCTC	2 cut(s)	104, 1047
Eco130I	CCWWGG	1 cut(s)	613
Eco24I	GRGCYC	3 cut(s)	106, 1049, 1074
Eco47I	GGWCC	3 cut(s)	48, 111, 1466
Eco53kI	GAGCTC	2 cut(s)	104, 1047
Eco57I	CTGAAG	3 cut(s)	1310, 1335, 1373
Eco88I	CYCGRG	2 cut(s)	107, 1073
Eco91I	GGTNACC	1 cut(s)	225
EcoICRI	GAGCTC	2 cut(s)	104, 1047
EcoO109I	RGGNCCY	1 cut(s)	111
EcoO65I	GGTNACC	1 cut(s)	225
EcoRI	GAATTC	2 cut(s)	565, 829
EcoRII	CCWGG	2 cut(s)	351, 708
EcoT14I	CCWWGG	1 cut(s)	613
EcoT38I	GRGCYC	3 cut(s)	106, 1049, 1074
ErhI	CCWWGG	1 cut(s)	613
FaeI	CATG	8 cut(s)	95, 533, 541, 926, 1171, 1349, 1494, 1613
FaqI	GGGAC	5 cut(s)	73, 97, 151, 540, 1371
FatI	CATG	8 cut(s)	91, 529, 537, 922, 1167, 1345, 1490, 1609
FauI	CCCGC	2 cut(s)	177, 203
FauNDI	CATATG	1 cut(s)	855
FbaI	TGATCA	1 cut(s)	1663
FokI	GGATG	7 cut(s)	460, 883, 1175, 1450, 1637, 1667, 1691
FriOI	GRGCYC	3 cut(s)	106, 1049, 1074
FspBI	CTAG	2 cut(s)	912, 1157
GlaI	GCGC	2 cut(s)	398, 1172
GsuI	CTGGAG	4 cut(s)	329, 356, 374, 770
HaeII	RGCGCY	1 cut(s)	400
HaeIII	GGCC	1 cut(s)	1004
HhaI	GCGC	2 cut(s)	399, 1173
Hin1II	CATG	8 cut(s)	95, 533, 541, 926, 1171, 1349, 1494, 1613
Hin6I	GCGC	2 cut(s)	397, 1171
HinP1I	GCGC	2 cut(s)	397, 1171
HincII	GTYRAC	2 cut(s)	366, 1488
HindII	GTYRAC	2 cut(s)	366, 1488
HinfI	GANTC	4 cut(s)	514, 553, 643, 1294
HphI	GGTGA	3 cut(s)	151, 652, 1395
Hpy166II	GTNNAC	4 cut(s)	26, 366, 886, 1488
Hpy188III	TCNNGA	8 cut(s)	572, 583, 1053, 1067, 1127, 1147, 1648, 1708
Hpy8I	GTNNAC	4 cut(s)	26, 366, 886, 1488
Hpy99I	CGWCG	1 cut(s)	748
HpyCH4III	ACNGT	4 cut(s)	363, 433, 883, 1250
HpyCH4IV	ACGT	2 cut(s)	164, 1059
HpyCH4V	TGCA	8 cut(s)	406, 727, 734, 800, 859, 965, 1750, 1763
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 403, 724, 902, 992, 995, 1001, 1130, 1319
HpyF3I	CTNAG	5 cut(s)	813, 1095, 1134, 1511, 1616
HpySE526I	ACGT	2 cut(s)	164, 1059
Hsp92II	CATG	8 cut(s)	95, 533, 541, 926, 1171, 1349, 1494, 1613
HspAI	GCGC	2 cut(s)	397, 1171
KflI	GGGWCCC	1 cut(s)	111
Ksp22I	TGATCA	1 cut(s)	1663
Kzo9I	GATC	7 cut(s)	378, 574, 579, 631, 1348, 1561, 1663
LguI	GCTCTTC	2 cut(s)	381, 1329
LmnI	GCTCC	5 cut(s)	109, 292, 850, 1044, 1589
Lsp1109I	GCAGC	8 cut(s)	311, 390, 977, 1007, 1297, 1376, 1379, 1578
LweI	GCATC	5 cut(s)	666, 787, 905, 1153, 1737
MaeI	CTAG	2 cut(s)	912, 1157
MaeII	ACGT	2 cut(s)	164, 1059
MaeIII	GTNAC	4 cut(s)	196, 225, 693, 1627
MalI	GATC	7 cut(s)	380, 576, 581, 633, 1350, 1563, 1665
MbiI	CCGCTC	2 cut(s)	152, 819
MboI	GATC	7 cut(s)	378, 574, 579, 631, 1348, 1561, 1663
MhlI	GDGCHC	3 cut(s)	106, 1049, 1074
MluCI	AATT	8 cut(s)	547, 565, 605, 829, 1176, 1256, 1393, 1694
MlyI	GAGTC	2 cut(s)	508, 562
MroXI	GAANNNNTTC	3 cut(s)	15, 1605, 1694
MseI	TTAA	5 cut(s)	146, 665, 1031, 1242, 1481
MslI	CAYNNNNRTG	1 cut(s)	773
MspA1I	CMGCKG	1 cut(s)	403
Mva1269I	GAATGC	1 cut(s)	1765
MvaI	CCWGG	2 cut(s)	353, 710
MwoI	GCNNNNNNNGC	9 cut(s)	11, 403, 724, 902, 992, 995, 1001, 1130, 1319
NciI	CCSGG	9 cut(s)	21, 30, 58, 108, 109, 126, 443, 519, 901
NdeI	CATATG	1 cut(s)	855
NdeII	GATC	7 cut(s)	378, 574, 579, 631, 1348, 1561, 1663
NlaIII	CATG	8 cut(s)	95, 533, 541, 926, 1171, 1349, 1494, 1613
NlaIV	GGNNCC	4 cut(s)	18, 112, 113, 1339
NmeAIII	GCCGAG	1 cut(s)	1758
NspI	RCATGY	2 cut(s)	926, 1494
NspV	TTCGAA	2 cut(s)	1640, 1757
PaeI	GCATGC	1 cut(s)	926
PciI	ACATGT	1 cut(s)	1490
PciSI	GCTCTTC	2 cut(s)	381, 1329
PcsI	WCGNNNNNNNCGW	1 cut(s)	183
PctI	GAATGC	1 cut(s)	1765
PdmI	GAANNNNTTC	3 cut(s)	15, 1605, 1694
PfeI	GAWTC	2 cut(s)	643, 1294
PfoI	TCCNGGA	2 cut(s)	351, 517
PleI	GAGTC	2 cut(s)	508, 561
PpsI	GAGTC	2 cut(s)	508, 561
PpuMI	RGGWCCY	1 cut(s)	111
PscI	ACATGT	1 cut(s)	1490
PsiI	TTATAA	1 cut(s)	1374
Psp124BI	GAGCTC	2 cut(s)	106, 1049
Psp5II	RGGWCCY	1 cut(s)	111
Psp6I	CCWGG	2 cut(s)	351, 708
PspEI	GGTNACC	1 cut(s)	225
PspGI	CCWGG	2 cut(s)	351, 708
PspN4I	GGNNCC	4 cut(s)	18, 112, 113, 1339
PspPI	GGNCC	3 cut(s)	48, 111, 1466
PspPPI	RGGWCCY	1 cut(s)	111
PstI	CTGCAG	1 cut(s)	408
PvuII	CAGCTG	1 cut(s)	403
RsaI	GTAC	2 cut(s)	25, 1509
RsaNI	GTAC	2 cut(s)	24, 1508
RseI	CAYNNNNRTG	1 cut(s)	773
SacI	GAGCTC	2 cut(s)	106, 1049
SapI	GCTCTTC	2 cut(s)	381, 1329
SaqAI	TTAA	5 cut(s)	146, 665, 1031, 1242, 1481
Sau3AI	GATC	7 cut(s)	378, 574, 579, 631, 1348, 1561, 1663
Sau96I	GGNCC	3 cut(s)	48, 111, 1466
SchI	GAGTC	2 cut(s)	508, 562
SduI	GDGCHC	3 cut(s)	106, 1049, 1074
SfaNI	GCATC	5 cut(s)	666, 787, 905, 1153, 1737
SfcI	CTRYAG	1 cut(s)	404
SfuI	TTCGAA	2 cut(s)	1640, 1757
SinI	GGWCC	3 cut(s)	48, 111, 1466
SmaI	CCCGGG	1 cut(s)	109
SmiMI	CAYNNNNRTG	1 cut(s)	773
SmlI	CTYRAG	1 cut(s)	1125
SmoI	CTYRAG	1 cut(s)	1125
SphI	GCATGC	1 cut(s)	926
Sse9I	AATT	8 cut(s)	547, 565, 605, 829, 1176, 1256, 1393, 1694
SsiI	CCGC	7 cut(s)	14, 122, 152, 170, 210, 819, 986
SspMI	CTAG	2 cut(s)	912, 1157
SstI	GAGCTC	2 cut(s)	106, 1049
StyI	CCWWGG	1 cut(s)	613
TaaI	ACNGT	4 cut(s)	363, 433, 883, 1250
TaiI	ACGT	2 cut(s)	167, 1062
TaqI	TCGA	9 cut(s)	186, 551, 657, 1118, 1297, 1640, 1647, 1727, 1757
TaqII	GACCGA	1 cut(s)	172
TasI	AATT	8 cut(s)	547, 565, 605, 829, 1176, 1256, 1393, 1694
TatI	WGTACW	1 cut(s)	1507
TauI	GCSGC	2 cut(s)	822, 989
TfiI	GAWTC	2 cut(s)	643, 1294
Tru1I	TTAA	5 cut(s)	146, 665, 1031, 1242, 1481
Tru9I	TTAA	5 cut(s)	146, 665, 1031, 1242, 1481
TscAI	CASTG	1 cut(s)	1770
TseI	GCWGC	9 cut(s)	5, 299, 403, 965, 995, 1310, 1364, 1367, 1566
TspGWI	ACGGA	2 cut(s)	59, 77
TspMI	CCCGGG	1 cut(s)	107
TspRI	CASTG	1 cut(s)	1770
VpaK11BI	GGWCC	3 cut(s)	48, 111, 1466
XapI	RAATTY	4 cut(s)	547, 565, 829, 1694
XceI	RCATGY	2 cut(s)	926, 1494
XcmI	CCANNNNNNNNNTGG	1 cut(s)	490
XmaI	CCCGGG	1 cut(s)	107
XmnI	GAANNNNTTC	3 cut(s)	15, 1605, 1694
XspI	CTAG	2 cut(s)	912, 1157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.