Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0008639

Physical Location & Seq

Genomic Coordinates Forward (+)

30560657 .. 30563440

Gene Structure 2784 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1231200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGCCGCCGAAGCGGTTCCGGGTACTCCCGGCATAAACGAAATGAGGCCCGAAACCGGGACGGAGTTCCGTTTTAACAACGGTTCGGGTTATGGACATGGAGCTCCCGGGTCCCCATGTCCGCCGGGGATAAGGAGGGTGGGTTTAAGGGCAGTGATTGATACGTCCCCGCCTTTCGGGTCGGTCGAGGAGGCTGTGACCCGTTTTGGCGGGAGGGGGTCTTGGATACCATTCTACAAGCTCGGAGAAAACTATAATGGGGTTGAGGAATTTGACCTGAAGAAAGTGGAGGAGCAGGCAGCTGAGTTGGAGAAGGATCTGATTGTGAAAGAACTGGAGACTCTTGATGTTCTTGAAGAACTGGCAACAACAAAAAGGATTGTGGAAGAGCTCAAGCGACAGCTGCAGAAAGAGGCATTGAAAAGCTTGACAGTCTCGCCGCAAGATTCCCATTTGGAAGAACACATGTTATCATCCCCTGCCATCAAAGAAATGAACAAGGAAATTTATAGGACTCCGGGAAACAACCATGAACACGTGATGGGAAATTCGAGTCCCTACCCGAATTCTCCTGATCTGATCTTGATGGAGTTGAAGCAAGCAAAATTGAACCTCGGTAAAACGATCAGTGATCTTGGGGTGATTCAATCTTCCGTCGAATGTTTGAATAAGAAGATGCGAAGCGAGAAAGTGTTACTTGAAAAGACCCGGGACAGGCTGACTTCGCAGTTTGCAGGGGTTTCGTCACTAGAGGAGGAGATGAAGAACATTAAGGTGAAGGCACAAATAGGCGATGATGCAGAAACAAATACTAAGAGTGGCTTTGGCAATTCAGCATTTGTTTCAAGGGAGCATATGCAGTTTAGTAAAATAGTGGAAGCTGCGAACTTTGAAGCATTTGGGGCAATGTCAAGGAATGAGCATTCCAAGAACATTATGGAGACTGCTGAAATGAGGTGGATTGCAGCTAAAAAGATGGAAGAAGCGGCAAAGGCAGCAGAGGCCGTTGCTCTTGCTGAAATCAAGGCTTTAACGAGTGGCGGGAGCTCGTCAGGGTACGTCCTTCCAGAGCCCGAGAAAATGAGTTTTAGTTCCCAGATGAAATCTCCTCTAAACTCGAAAGCTCAAGAAGCTGAGGGCTGGTTCAAGAAGAAGCTAGTGGATGCCATGCGCCAAATCGATGAAGCTCATACTTCTAAACTGGCTATATTGAGGAAGCTGAGAGAAGCAACGGAAGAAGTTAAACACAGCAAACAATTCTTGGAGGAGGCTCTGAACAAAGTAGAAATTGCTAATCGAAAGCAACTTGCTGCCGAAGAAGCTCTTGAGAGTTGGGGACCCGAGCACCATCAGAAGGGACAAGCAGCAGCCTACAACATTCACAACCTAAACAATTTCCGATCACCAGATTATAACCTGAACTCTCCGATGAATGAGATGAACAAGTCAGTCATAGTAAATGATAGCCCGAAGCCAGTTTTAAGGTCAACATGCTCGATGAGAGATGTACTTAGCAGGAAGCAAGTTCTCCCCGAAGATTTTGTGGCAACAAAGGAAGTGGATCGCGGCCAGACTGACACTCACAGAGTAGCCTTGAGTGAAATGCTTCATGCTCTGAGGGAGGATTTAACATTTCCTTCGAAAGTCGAGAAGGAAGGAAATGATCAGAAGCCGGTTTTAGCACATAGGAAGAAATTCGGGTTCATCCAGATTTCGCTTCCCTTGTCGAGGCCGAGTAAGAAAAAGATGCAAACTTCGAATGCAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009987 GO:0016043 GO:0019750 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WEMBL

Protein Analysis

590

Amino Acids

65.65

Weight (kDa)

6.61

Isoelectric Point (pI)

50.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WEMBL	PF05701	51 - 154	6.3e-15	Weak chloroplast movement under blue light
WEMBL	PF05701	196 - 452	9.5e-24	Weak chloroplast movement under blue light

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008639)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40480 AT3G56270
fragaria_vesca	FvH4_7g25600 FvH4_7g25600
malus_domestica	MD01G1163200.v1.1 MD07G1231200.v1.1
prunus_persica	Prupe.2G261200_v2.0.a1 Prupe.2G261200_v2.0.a1
pyrus_communis	pycom01g17780 pycom07g20910
rosa_chinensis	RchiOBHm_Chr1g0371731
rosa_laevigata	RLG00000026947
rosa_multiflora	Rmu_co8082684.1_g000001 Rmu_co8220228.1_g000001 Rmu_sc0001755.1_g000055 Rmu_sc0019360.1_g000002
rosa_roxburghii	Rroxscaffold_4G00285490
rosa_rugosa	Rorug01G0365800
rosa_samantha	Rh1AG375900 Rh1BG339300 Rh1CG352400 Rh1DG370400
rosa_wichuraiana	Rw1G033070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1413
AccII	CGCG	1 cut(s)	1566
AciI	CCGC	9 cut(s)	6, 14, 122, 170, 210, 440, 986, 1041, 1566
AclWI	GGATC	2 cut(s)	324, 1569
AcoI	YGGCCR	2 cut(s)	3, 1567
AcsI	RAATTY	5 cut(s)	269, 504, 547, 565, 1694
AcuI	CTGAAG	1 cut(s)	299
AcvI	CACGTG	1 cut(s)	538
AfaI	GTAC	3 cut(s)	25, 1058, 1509
AfiI	CCNNNNNNNGG	6 cut(s)	56, 57, 176, 714, 1354, 1728
AflIII	ACRYGT	2 cut(s)	465, 535
Alw21I	GWGCWC	4 cut(s)	106, 393, 1049, 1347
Alw26I	GTCTC	3 cut(s)	332, 439, 935
AlwI	GGATC	2 cut(s)	324, 1569
Ama87I	CYCGRG	4 cut(s)	107, 708, 1073, 1340
AoxI	GGCC	5 cut(s)	3, 47, 1002, 1567, 1730
ApeKI	GCWGC	8 cut(s)	299, 403, 881, 965, 995, 1310, 1364, 1367
ApoI	RAATTY	5 cut(s)	269, 504, 547, 565, 1694
Asp700I	GAANNNNTTC	3 cut(s)	15, 1605, 1694
AspLEI	GCGC	1 cut(s)	1173
AspS9I	GGNCC	3 cut(s)	48, 111, 1337
AsuC2I	CCSGG	9 cut(s)	21, 30, 58, 108, 109, 126, 519, 709, 710
AsuHPI	GGTGA	3 cut(s)	652, 787, 1395
AsuII	TTCGAA	2 cut(s)	1640, 1757
AvaI	CYCGRG	4 cut(s)	107, 708, 1073, 1340
AvaII	GGWCC	2 cut(s)	111, 1337
BanII	GRGCYC	4 cut(s)	106, 393, 1049, 1074
BbrPI	CACGTG	1 cut(s)	538
Bbv12I	GWGCWC	4 cut(s)	106, 393, 1049, 1347
BbvCI	CCTCAGC	1 cut(s)	1134
BbvI	GCAGC	8 cut(s)	311, 390, 868, 977, 1007, 1297, 1376, 1379
BccI	CCATC	5 cut(s)	491, 535, 580, 970, 1356
BceAI	ACGGC	1 cut(s)	989
BcgI	CGANNNNNNTGC	2 cut(s)	723, 757
BciVI	GTATCC	1 cut(s)	219
BclI	TGATCA	1 cut(s)	1663
BcnI	CCSGG	9 cut(s)	21, 30, 58, 108, 109, 126, 519, 709, 710
BcoDI	GTCTC	3 cut(s)	332, 439, 935
BfaI	CTAG	2 cut(s)	749, 1157
BfmI	CTRYAG	1 cut(s)	404
BfuI	GTATCC	1 cut(s)	219
Bme1390I	CCNGG	9 cut(s)	21, 30, 58, 108, 109, 126, 519, 709, 710
Bme18I	GGWCC	2 cut(s)	111, 1337
BmeT110I	CYCGRG	4 cut(s)	107, 708, 1073, 1340
BmgT120I	GGNCC	3 cut(s)	48, 111, 1337
BmiI	GGNNCC	5 cut(s)	18, 112, 113, 1338, 1339
BmrFI	CCNGG	9 cut(s)	21, 30, 58, 108, 109, 126, 519, 709, 710
BmsI	GCATC	4 cut(s)	666, 787, 1153, 1737
BpmI	CTGGAG	1 cut(s)	356
Bpu10I	CCTNAGC	1 cut(s)	1134
Bpu14I	TTCGAA	2 cut(s)	1640, 1757
BpuEI	CTTGAG	4 cut(s)	377, 1110, 1346, 1615
BpuMI	CCSGG	9 cut(s)	21, 30, 58, 108, 109, 126, 519, 709, 710
Bsa29I	ATCGAT	1 cut(s)	1179
BsaAI	YACGTR	1 cut(s)	538
BsaJI	CCNNGG	4 cut(s)	107, 125, 613, 708
BsaXI	ACNNNNNCTCC	2 cut(s)	127, 157
Bsc4I	CCNNNNNNNGG	6 cut(s)	56, 57, 176, 714, 1354, 1728
Bse118I	RCCGGY	1 cut(s)	1672
Bse1I	ACTGG	4 cut(s)	339, 366, 1206, 1475
Bse3DI	GCAATG	2 cut(s)	912, 1770
BseCI	ATCGAT	1 cut(s)	1179
BseDI	CCNNGG	4 cut(s)	107, 125, 613, 708
BseGI	GGATG	3 cut(s)	473, 1168, 1704
BseLI	CCNNNNNNNGG	6 cut(s)	56, 57, 176, 714, 1354, 1728
BseMI	GCAATG	2 cut(s)	912, 1770
BseMII	CTCAG	4 cut(s)	294, 1125, 1211, 1607
BseNI	ACTGG	4 cut(s)	339, 366, 1206, 1475
BseRI	GAGGAG	6 cut(s)	203, 305, 767, 770, 1098, 1280
BseXI	GCAGC	8 cut(s)	311, 390, 868, 977, 1007, 1297, 1376, 1379
Bsh1236I	CGCG	1 cut(s)	1566
Bsh1285I	CGRYCG	1 cut(s)	186
BshFI	GGCC	5 cut(s)	5, 49, 1004, 1569, 1732
BshVI	ATCGAT	1 cut(s)	1179
BsiEI	CGRYCG	1 cut(s)	186
BsiHKAI	GWGCWC	4 cut(s)	106, 393, 1049, 1347
BsiHKCI	CYCGRG	4 cut(s)	107, 708, 1073, 1340
BsiSI	CCGG	8 cut(s)	20, 30, 57, 108, 125, 518, 709, 1673
BslFI	GGGAC	7 cut(s)	73, 97, 151, 540, 725, 1350, 1371
BslI	CCNNNNNNNGG	6 cut(s)	56, 57, 176, 714, 1354, 1728
BsmAI	GTCTC	3 cut(s)	332, 439, 935
BsmFI	GGGAC	7 cut(s)	73, 97, 151, 540, 725, 1350, 1371
BsmI	GAATGC	2 cut(s)	922, 1765
BsnI	GGCC	5 cut(s)	5, 49, 1004, 1569, 1732
BsoBI	CYCGRG	4 cut(s)	107, 708, 1073, 1340
Bsp119I	TTCGAA	2 cut(s)	1640, 1757
Bsp1286I	GDGCHC	5 cut(s)	106, 393, 1049, 1074, 1347
Bsp143I	GATC	8 cut(s)	316, 574, 579, 624, 631, 1400, 1561, 1663
BspACI	CCGC	9 cut(s)	6, 14, 122, 170, 210, 440, 986, 1041, 1566
BspANI	GGCC	5 cut(s)	5, 49, 1004, 1569, 1732
BspCNI	CTCAG	4 cut(s)	295, 1126, 1212, 1608
BspDI	ATCGAT	1 cut(s)	1179
BspFNI	CGCG	1 cut(s)	1566
BspLI	GGNNCC	5 cut(s)	18, 112, 113, 1338, 1339
BspMAI	CTGCAG	1 cut(s)	408
BspPI	GGATC	2 cut(s)	324, 1569
BspQI	GCTCTTC	1 cut(s)	381
BspT104I	TTCGAA	2 cut(s)	1640, 1757
BsrDI	GCAATG	2 cut(s)	912, 1770
BsrFI	RCCGGY	1 cut(s)	1672
BsrI	ACTGG	4 cut(s)	339, 366, 1206, 1475
BssAI	RCCGGY	1 cut(s)	1672
BssECI	CCNNGG	4 cut(s)	107, 125, 613, 708
BssMI	GATC	8 cut(s)	316, 574, 579, 624, 631, 1400, 1561, 1663
Bst4CI	ACNGT	2 cut(s)	83, 433
Bst6I	CTCTTC	1 cut(s)	381
BstBAI	YACGTR	1 cut(s)	538
BstBI	TTCGAA	2 cut(s)	1640, 1757
BstC8I	GCNNGC	2 cut(s)	297, 600
BstDEI	CTNAG	6 cut(s)	303, 813, 1134, 1220, 1511, 1616
BstENI	CCTNNNNNAGG	1 cut(s)	1726
BstF5I	GGATG	3 cut(s)	473, 1168, 1704
BstFNI	CGCG	1 cut(s)	1566
BstHHI	GCGC	1 cut(s)	1173
BstKTI	GATC	8 cut(s)	319, 577, 582, 627, 634, 1403, 1564, 1666
BstMAI	GTCTC	3 cut(s)	332, 439, 935
BstMBI	GATC	8 cut(s)	316, 574, 579, 624, 631, 1400, 1561, 1663
BstMCI	CGRYCG	1 cut(s)	186
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 403, 724, 902, 992, 995, 1001, 1130, 1319
BstNSI	RCATGY	2 cut(s)	469, 1494
BstSCI	CCNGG	9 cut(s)	19, 28, 56, 106, 107, 124, 517, 707, 708
BstSFI	CTRYAG	1 cut(s)	404
BstUI	CGCG	1 cut(s)	1566
BstV1I	GCAGC	8 cut(s)	311, 390, 868, 977, 1007, 1297, 1376, 1379
BstX2I	RGATCY	1 cut(s)	316
BstYI	RGATCY	1 cut(s)	316
Bsu15I	ATCGAT	1 cut(s)	1179
BsuI	GTATCC	1 cut(s)	219
BsuRI	GGCC	5 cut(s)	5, 49, 1004, 1569, 1732
BsuTUI	ATCGAT	1 cut(s)	1179
BtgZI	GCGATG	1 cut(s)	807
BtsCI	GGATG	3 cut(s)	473, 1168, 1704
BtsI	GCAGTG	1 cut(s)	159
BtsIMutI	CAGTG	2 cut(s)	159, 634
Cac8I	GCNNGC	2 cut(s)	297, 600
CfoI	GCGC	1 cut(s)	1173
Cfr10I	RCCGGY	1 cut(s)	1672
Cfr13I	GGNCC	3 cut(s)	48, 111, 1337
Cfr9I	CCCGGG	2 cut(s)	107, 708
ClaI	ATCGAT	1 cut(s)	1179
Csp6I	GTAC	3 cut(s)	24, 1057, 1508
CspCI	CAANNNNNGTGG	2 cut(s)	1539, 1574
CviAII	CATG	7 cut(s)	98, 117, 466, 530, 1168, 1491, 1610
CviQI	GTAC	3 cut(s)	24, 1057, 1508
DdeI	CTNAG	6 cut(s)	303, 813, 1134, 1220, 1511, 1616
DpnI	GATC	8 cut(s)	318, 576, 581, 626, 633, 1402, 1563, 1665
DpnII	GATC	8 cut(s)	316, 574, 579, 624, 631, 1400, 1561, 1663
EaeI	YGGCCR	2 cut(s)	3, 1567
Eam1104I	CTCTTC	1 cut(s)	381
EarI	CTCTTC	1 cut(s)	381
EciI	GGCGGA	1 cut(s)	111
Ecl136II	GAGCTC	3 cut(s)	104, 391, 1047
Eco24I	GRGCYC	4 cut(s)	106, 393, 1049, 1074
Eco47I	GGWCC	2 cut(s)	111, 1337
Eco53kI	GAGCTC	3 cut(s)	104, 391, 1047
Eco57I	CTGAAG	1 cut(s)	299
Eco72I	CACGTG	1 cut(s)	538
Eco88I	CYCGRG	4 cut(s)	107, 708, 1073, 1340
EcoICRI	GAGCTC	3 cut(s)	104, 391, 1047
EcoNI	CCTNNNNNAGG	1 cut(s)	1726
EcoO109I	RGGNCCY	2 cut(s)	111, 1337
EcoRI	GAATTC	1 cut(s)	565
EcoT38I	GRGCYC	4 cut(s)	106, 393, 1049, 1074
FaeI	CATG	7 cut(s)	101, 120, 469, 533, 1171, 1494, 1613
FalI	AAGNNNNNCTT	6 cut(s)	681, 713, 806, 838, 1308, 1340
FaqI	GGGAC	7 cut(s)	73, 97, 151, 540, 725, 1350, 1371
FatI	CATG	7 cut(s)	97, 116, 465, 529, 1167, 1490, 1609
FauI	CCCGC	3 cut(s)	177, 203, 1034
FauNDI	CATATG	1 cut(s)	855
FbaI	TGATCA	1 cut(s)	1663
FokI	GGATG	3 cut(s)	460, 1175, 1691
FriOI	GRGCYC	4 cut(s)	106, 393, 1049, 1074
FspBI	CTAG	2 cut(s)	749, 1157
GlaI	GCGC	1 cut(s)	1172
GsuI	CTGGAG	1 cut(s)	356
HaeIII	GGCC	5 cut(s)	5, 49, 1004, 1569, 1732
HapII	CCGG	8 cut(s)	20, 30, 57, 108, 125, 518, 709, 1673
HhaI	GCGC	1 cut(s)	1173
Hin1II	CATG	7 cut(s)	101, 120, 469, 533, 1171, 1494, 1613
Hin6I	GCGC	1 cut(s)	1171
HinP1I	GCGC	1 cut(s)	1171
HincII	GTYRAC	1 cut(s)	1488
HindII	GTYRAC	1 cut(s)	1488
HindIII	AAGCTT	1 cut(s)	424
HinfI	GANTC	5 cut(s)	340, 446, 514, 553, 643
HpaII	CCGG	8 cut(s)	20, 30, 57, 108, 125, 518, 709, 1673
HphI	GGTGA	3 cut(s)	652, 787, 1395
Hpy166II	GTNNAC	1 cut(s)	1488
Hpy188I	TCNGA	9 cut(s)	245, 321, 579, 1275, 1353, 1400, 1428, 1617, 1668
Hpy8I	GTNNAC	1 cut(s)	1488
Hpy99I	CGWCG	1 cut(s)	659
HpyAV	CCTTC	7 cut(s)	307, 772, 1073, 1348, 1645, 1647, 1649
HpyCH4III	ACNGT	2 cut(s)	83, 433
HpyCH4IV	ACGT	3 cut(s)	164, 537, 1059
HpyCH4V	TGCA	7 cut(s)	406, 734, 800, 859, 965, 1750, 1763
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 403, 724, 902, 992, 995, 1001, 1130, 1319
HpyF3I	CTNAG	6 cut(s)	303, 813, 1134, 1220, 1511, 1616
HpySE526I	ACGT	3 cut(s)	164, 537, 1059
Hsp92II	CATG	7 cut(s)	101, 120, 469, 533, 1171, 1494, 1613
HspAI	GCGC	1 cut(s)	1171
KflI	GGGWCCC	2 cut(s)	111, 1337
Ksp22I	TGATCA	1 cut(s)	1663
Kzo9I	GATC	8 cut(s)	316, 574, 579, 624, 631, 1400, 1561, 1663
LguI	GCTCTTC	1 cut(s)	381
LmnI	GCTCC	5 cut(s)	101, 109, 292, 850, 1044
Lsp1109I	GCAGC	8 cut(s)	311, 390, 868, 977, 1007, 1297, 1376, 1379
LweI	GCATC	4 cut(s)	666, 787, 1153, 1737
MaeI	CTAG	2 cut(s)	749, 1157
MaeII	ACGT	3 cut(s)	164, 537, 1059
MaeIII	GTNAC	3 cut(s)	196, 693, 744
MalI	GATC	8 cut(s)	318, 576, 581, 626, 633, 1402, 1563, 1665
MboI	GATC	8 cut(s)	316, 574, 579, 624, 631, 1400, 1561, 1663
MflI	RGATCY	1 cut(s)	316
MhlI	GDGCHC	5 cut(s)	106, 393, 1049, 1074, 1347
MlyI	GAGTC	3 cut(s)	334, 508, 562
MmeI	TCCRAC	1 cut(s)	288
MroXI	GAANNNNTTC	3 cut(s)	15, 1605, 1694
MseI	TTAA	7 cut(s)	75, 146, 771, 1031, 1242, 1481, 1628
MslI	CAYNNNNRTG	1 cut(s)	773
MspA1I	CMGCKG	2 cut(s)	302, 403
MspI	CCGG	8 cut(s)	20, 30, 57, 108, 125, 518, 709, 1673
MspR9I	CCNGG	9 cut(s)	21, 30, 58, 108, 109, 126, 519, 709, 710
Mva1269I	GAATGC	2 cut(s)	922, 1765
MvnI	CGCG	1 cut(s)	1566
MwoI	GCNNNNNNNGC	9 cut(s)	11, 403, 724, 902, 992, 995, 1001, 1130, 1319
NciI	CCSGG	9 cut(s)	21, 30, 58, 108, 109, 126, 519, 709, 710
NdeI	CATATG	1 cut(s)	855
NdeII	GATC	8 cut(s)	316, 574, 579, 624, 631, 1400, 1561, 1663
NlaIII	CATG	7 cut(s)	101, 120, 469, 533, 1171, 1494, 1613
NlaIV	GGNNCC	5 cut(s)	18, 112, 113, 1338, 1339
NmeAIII	GCCGAG	1 cut(s)	1758
NmuCI	GTSAC	2 cut(s)	196, 744
NspI	RCATGY	2 cut(s)	469, 1494
NspV	TTCGAA	2 cut(s)	1640, 1757
PciI	ACATGT	1 cut(s)	465
PciSI	GCTCTTC	1 cut(s)	381
PcsI	WCGNNNNNNNCGW	1 cut(s)	183
PctI	GAATGC	2 cut(s)	922, 1765
PdmI	GAANNNNTTC	3 cut(s)	15, 1605, 1694
PfeI	GAWTC	2 cut(s)	446, 643
PfoI	TCCNGGA	1 cut(s)	517
PleI	GAGTC	3 cut(s)	334, 508, 561
PmaCI	CACGTG	1 cut(s)	538
PmlI	CACGTG	1 cut(s)	538
PpsI	GAGTC	3 cut(s)	334, 508, 561
Ppu21I	YACGTR	1 cut(s)	538
PpuMI	RGGWCCY	2 cut(s)	111, 1337
PscI	ACATGT	1 cut(s)	465
PsiI	TTATAA	1 cut(s)	1413
Psp124BI	GAGCTC	3 cut(s)	106, 393, 1049
Psp5II	RGGWCCY	2 cut(s)	111, 1337
PspCI	CACGTG	1 cut(s)	538
PspN4I	GGNNCC	5 cut(s)	18, 112, 113, 1338, 1339
PspPI	GGNCC	3 cut(s)	48, 111, 1337
PspPPI	RGGWCCY	2 cut(s)	111, 1337
PstI	CTGCAG	1 cut(s)	408
PsuI	RGATCY	1 cut(s)	316
PvuII	CAGCTG	2 cut(s)	302, 403
RsaI	GTAC	3 cut(s)	25, 1058, 1509
RsaNI	GTAC	3 cut(s)	24, 1057, 1508
RseI	CAYNNNNRTG	1 cut(s)	773
SacI	GAGCTC	3 cut(s)	106, 393, 1049
SapI	GCTCTTC	1 cut(s)	381
SaqAI	TTAA	7 cut(s)	75, 146, 771, 1031, 1242, 1481, 1628
Sau3AI	GATC	8 cut(s)	316, 574, 579, 624, 631, 1400, 1561, 1663
Sau96I	GGNCC	3 cut(s)	48, 111, 1337
SchI	GAGTC	3 cut(s)	334, 508, 562
ScrFI	CCNGG	9 cut(s)	21, 30, 58, 108, 109, 126, 519, 709, 710
SduI	GDGCHC	5 cut(s)	106, 393, 1049, 1074, 1347
SfaNI	GCATC	4 cut(s)	666, 787, 1153, 1737
SfcI	CTRYAG	1 cut(s)	404
SfuI	TTCGAA	2 cut(s)	1640, 1757
SinI	GGWCC	2 cut(s)	111, 1337
SmaI	CCCGGG	2 cut(s)	109, 710
SmiMI	CAYNNNNRTG	1 cut(s)	773
SmlI	CTYRAG	4 cut(s)	392, 1125, 1325, 1594
SmoI	CTYRAG	4 cut(s)	392, 1125, 1325, 1594
SsiI	CCGC	9 cut(s)	6, 14, 122, 170, 210, 440, 986, 1041, 1566
SspMI	CTAG	2 cut(s)	749, 1157
SstI	GAGCTC	3 cut(s)	106, 393, 1049
StyD4I	CCNGG	9 cut(s)	19, 28, 56, 106, 107, 124, 517, 707, 708
TaaI	ACNGT	2 cut(s)	83, 433
TaiI	ACGT	3 cut(s)	167, 540, 1062
TaqII	GACCGA	1 cut(s)	172
TatI	WGTACW	1 cut(s)	1507
TauI	GCSGC	4 cut(s)	8, 442, 989, 1569
TfiI	GAWTC	2 cut(s)	446, 643
Tru1I	TTAA	7 cut(s)	75, 146, 771, 1031, 1242, 1481, 1628
Tru9I	TTAA	7 cut(s)	75, 146, 771, 1031, 1242, 1481, 1628
TscAI	CASTG	2 cut(s)	159, 634
TseFI	GTSAC	2 cut(s)	196, 744
TseI	GCWGC	8 cut(s)	299, 403, 881, 965, 995, 1310, 1364, 1367
Tsp45I	GTSAC	2 cut(s)	196, 744
TspDTI	ATGAA	9 cut(s)	509, 546, 776, 1115, 1197, 1445, 1454, 1598, 1693
TspGWI	ACGGA	4 cut(s)	59, 77, 643, 1247
TspMI	CCCGGG	2 cut(s)	107, 708
TspRI	CASTG	2 cut(s)	159, 634
VpaK11BI	GGWCC	2 cut(s)	111, 1337
XagI	CCTNNNNNAGG	1 cut(s)	1726
XapI	RAATTY	5 cut(s)	269, 504, 547, 565, 1694
XceI	RCATGY	2 cut(s)	469, 1494
XcmI	CCANNNNNNNNNTGG	1 cut(s)	934
XmaI	CCCGGG	2 cut(s)	107, 708
XmnI	GAANNNNTTC	3 cut(s)	15, 1605, 1694
XspI	CTAG	2 cut(s)	749, 1157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.