Prupe.2G261200_v2.0.a1

WEB family protein At2g40480-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
27047517 .. 27050384
2868 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G261200.2

Sequence Viewer

Length: 1773 bp
ATGGCCGCCGAACCGTTTCCGGGGACACCTGGCATCAAGGAAATGAGGTCCGAGACCGGGTCGGACTTCCGTTTTAGCACGGGTTCAGGTCATGGGCACGGAGCTTCTATGTCCCCGAGTCCGCCGGGGATAAGGAGGGTGGGCTTGAGGGCGGAGATTGATACTTCCCCGCCTTTCGGGTCGGTCGAAGAGGCTGTGACCCGTTTTGGTGGCCGCGGGTCTTGGATACCATTCTACAAACTCGGAGAAAACTACAATGGGATTGAAGAGTTTGACTTGAAGAAGGTGGAGGAGCAGGCAGCAGAGTTGGAGAAGGATCTGATTGTGAAGGAGCTAGAGACACTTGATGTGCTAGAAGAACTGGCAACAACTAAAAGGATTGTCGAAGAGCTAAAGCGGCAGCTGCAGAAAGAAGCCTTGAAATGCTTGACGGTAGTCTCGCCACCAGATTTTCATTCAGAAGAACACTTTTCATCATCCCCTGCTGTCAAGGAAATGAACAAGGAGAATCATAGAAATGTTGCCAGCAACCATGAGCACGTGATGGGGAATTCAAGTCCCTACCACAATTCTCCTGATCTGATCTTGACGGAGTTGAAACAAGCAAAACTGAACCTTGGTAAAACCATCAATGATCTTGGGGTGATTCAATCTTCTGTTGAAACTTTGAATAAGAAAATGCAGAACGAGAAGAACTTGCTTGAAAAGACCCGTGAGAAGCTGACTTCGCAGTTTGCAGGGGTGTCGTCGCTGGAGGAGGAGATGAAGAACATAAAAGTGAAGACACAAATGGCTGATGATGCAGAAACCAATGCTAAAATTTGCTTTGAGAATTCAGCATGTGTTTCAAGGGAGCATATGCAATTTAAGAGAATGGTAGAAGCTGCGAACTTCGAAGCATCAGGGGCAATGTCAAGGAATGAACAAACCAAGAGCATTATGAAGACTGCTGAAATGAGGTGGGTTGCAGCTAAAAAGATGGAAGAAGCAGCAAGGGCAGCAGAAGCTGTTGCTCTTGCTGAAATCAAGTCTCTAACAAGCTCTGGGGGCTCATCAGGGTATGTCCTTCCAGAGCCTGAGAAAATGAGTATTAGTTCTCAAATGAAATCTCCTCTAAACTTGAAAGCTCAAGAAGCTGAGGGCTGGTTCAAGAAGAAGCTAGTAGATGCCATGCGCCAAATTGATGAAGCTCATACTTCTAAACTGGCCATACTAAGGAAGCTGAAAGAAGCAACAGAAGAAGTTAAACACAGTAAACAATTCTTGGAGGAGGCTCTAAACAAAGTGGAAATTGCGAATAGAAAGCAACTAGCTGCTCAAGAGGCTCTCCAGAGCTGGGGACCTGAGCGTGACCAAAAGGAACAGGCTGCTGCTTATAACACCACCAACCTAAACAATTTTCAATCACCAGATTATAATCAGAACTCTCCGATGAATGAGATGAACAAGTCAGTCATAGTAAATGAGGGTCCAAAGCCTCATCTAAGGTCAACAGTTTCAATGCGAGATGTTCTTAGCAGGAAGCAAGTTCTGCCTGAAGATTTTGTGGAGAAAAAGGAAATGGAACGTGGCCACCCCGAAATGCACCGAGTGGCTTTGAGCGAAATGCTTCATGCTCTGAGGGAGGATTTAACATTTCCTGCAAAAGTTGAGAAAGATGGAAATGATCAAAAGCCATTTTTGACACAGAGGAAGAAGTTCGGGTTCATCCACATATCACTTCCCCTGTCCAAGCCAAGTAAGAAAAAGACACAAACTTTGAACGCAATGTGA

Protein Analysis

591

Amino Acids

66.18

Weight (kDa)

6.8

Isoelectric Point (pI)

52.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1377, 1416
AccII CGCG 1 cut(s) 216
AciI CCGC 7 cut(s) 6, 122, 152, 170, 214, 216, 397
AclWI GGATC 1 cut(s) 324
AcoI YGGCCR 4 cut(s) 3, 211, 1206, 1570
AcsI RAATTY 3 cut(s) 550, 819, 832
AcuI CTGAAG 1 cut(s) 1557
AcvI CACGTG 1 cut(s) 541
AdeI CACNNNGTG 1 cut(s) 1591
AfiI CCNNNNNNNGG 5 cut(s) 20, 57, 176, 1215, 1336
AjnI CCWGG 1 cut(s) 28
Alw21I GWGCWC 1 cut(s) 540
Alw26I GTCTC 4 cut(s) 47, 332, 442, 1035
AlwI GGATC 1 cut(s) 324
AlwNI CAGNNNCTG 2 cut(s) 1007, 1076
Ama87I CYCGRG 1 cut(s) 115
AoxI GGCC 4 cut(s) 3, 211, 1206, 1570
ApoI RAATTY 3 cut(s) 550, 819, 832
ArsI GACNNNNNNTTYG 2 cut(s) 1741, 1773
Asp700I GAANNNNTTC 3 cut(s) 15, 1608, 1697
AspLEI GCGC 1 cut(s) 1176
AspS9I GGNCC 3 cut(s) 48, 1340, 1469
AsuC2I CCSGG 3 cut(s) 21, 58, 126
AsuHPI GGTGA 2 cut(s) 655, 1398
AsuII TTCGAA 1 cut(s) 894
AvaI CYCGRG 1 cut(s) 115
AvaII GGWCC 3 cut(s) 48, 1340, 1469
BaeGI GKGCMC 1 cut(s) 99
BalI TGGCCA 2 cut(s) 1208, 1572
BanII GRGCYC 1 cut(s) 1052
BbrPI CACGTG 1 cut(s) 541
BbsI GAAGAC 2 cut(s) 788, 950
Bbv12I GWGCWC 1 cut(s) 540
BbvCI CCTCAGC 1 cut(s) 1137
BccI CCATC 4 cut(s) 538, 635, 973, 1652
BcgI CGANNNNNNTGC 2 cut(s) 726, 760
BciT130I CCWGG 1 cut(s) 30
BciVI GTATCC 1 cut(s) 219
BclI TGATCA 1 cut(s) 1666
BcnI CCSGG 3 cut(s) 21, 58, 126
BcoDI GTCTC 4 cut(s) 47, 332, 442, 1035
BfaI CTAG 4 cut(s) 335, 353, 1160, 1310
BfmI CTRYAG 1 cut(s) 404
BfuI GTATCC 1 cut(s) 219
Bme1390I CCNGG 4 cut(s) 21, 30, 58, 126
Bme18I GGWCC 3 cut(s) 48, 1340, 1469
BmeT110I CYCGRG 1 cut(s) 115
BmgT120I GGNCC 3 cut(s) 48, 1340, 1469
BmiI GGNNCC 2 cut(s) 1341, 1470
BmrFI CCNGG 4 cut(s) 21, 30, 58, 126
BmsI GCATC 4 cut(s) 42, 790, 908, 1156
BoxI GACNNNNGTC 1 cut(s) 434
BpiI GAAGAC 2 cut(s) 788, 950
BpmI CTGGAG 2 cut(s) 773, 1313
Bpu10I CCTNAGC 2 cut(s) 1137, 1344
Bpu14I TTCGAA 1 cut(s) 894
BpuEI CTTGAG 3 cut(s) 166, 1113, 1302
BpuMI CCSGG 3 cut(s) 21, 58, 126
BsaAI YACGTR 1 cut(s) 541
BsaBI GATNNNNATC 1 cut(s) 1416
BsaI GGTCTC 1 cut(s) 47
BsaJI CCNNGG 4 cut(s) 20, 125, 214, 616
Bsc4I CCNNNNNNNGG 5 cut(s) 20, 57, 176, 1215, 1336
Bse1I ACTGG 2 cut(s) 366, 1209
Bse3DI GCAATG 2 cut(s) 915, 1773
Bse8I GATNNNNATC 1 cut(s) 1416
BseBI CCWGG 1 cut(s) 30
BseDI CCNNGG 4 cut(s) 20, 125, 214, 616
BseGI GGATG 2 cut(s) 476, 1707
BseJI GATNNNNATC 1 cut(s) 1416
BseLI CCNNNNNNNGG 5 cut(s) 20, 57, 176, 1215, 1336
BseMI GCAATG 2 cut(s) 915, 1773
BseMII CTCAG 4 cut(s) 1068, 1128, 1335, 1610
BseNI ACTGG 2 cut(s) 366, 1209
BseRI GAGGAG 5 cut(s) 305, 770, 773, 1101, 1283
BseSI GKGCMC 1 cut(s) 99
BseYI CCCAGC 1 cut(s) 1335
Bsh1236I CGCG 1 cut(s) 216
Bsh1285I CGRYCG 1 cut(s) 186
BshFI GGCC 4 cut(s) 5, 213, 1208, 1572
BsiEI CGRYCG 1 cut(s) 186
BsiHKAI GWGCWC 1 cut(s) 540
BsiHKCI CYCGRG 1 cut(s) 115
BsiSI CCGG 3 cut(s) 20, 57, 125
BslFI GGGAC 4 cut(s) 37, 97, 543, 1353
BslI CCNNNNNNNGG 5 cut(s) 20, 57, 176, 1215, 1336
BsmAI GTCTC 4 cut(s) 47, 332, 442, 1035
BsmFI GGGAC 4 cut(s) 37, 97, 543, 1353
BsnI GGCC 4 cut(s) 5, 213, 1208, 1572
Bso31I GGTCTC 1 cut(s) 47
BsoBI CYCGRG 1 cut(s) 115
Bsp119I TTCGAA 1 cut(s) 894
Bsp1286I GDGCHC 3 cut(s) 99, 540, 1052
Bsp143I GATC 5 cut(s) 316, 577, 582, 634, 1666
BspACI CCGC 7 cut(s) 6, 122, 152, 170, 214, 216, 397
BspANI GGCC 4 cut(s) 5, 213, 1208, 1572
BspCNI CTCAG 4 cut(s) 1069, 1129, 1336, 1611
BspFNI CGCG 1 cut(s) 216
BspLI GGNNCC 2 cut(s) 1341, 1470
BspMAI CTGCAG 1 cut(s) 408
BspPI GGATC 1 cut(s) 324
BspQI GCTCTTC 1 cut(s) 381
BspT104I TTCGAA 1 cut(s) 894
BspTNI GGTCTC 1 cut(s) 47
BsrDI GCAATG 2 cut(s) 915, 1773
BsrI ACTGG 2 cut(s) 366, 1209
BssECI CCNNGG 4 cut(s) 20, 125, 214, 616
BssMI GATC 5 cut(s) 316, 577, 582, 634, 1666
BssT1I CCWWGG 1 cut(s) 616
Bst2UI CCWGG 1 cut(s) 30
Bst4CI ACNGT 4 cut(s) 15, 433, 1253, 1495
Bst6I CTCTTC 3 cut(s) 183, 261, 381
BstAPI GCANNNNNTGC 1 cut(s) 1531
BstBAI YACGTR 1 cut(s) 541
BstBI TTCGAA 1 cut(s) 894
BstC8I GCNNGC 2 cut(s) 297, 526
BstDEI CTNAG 7 cut(s) 1077, 1137, 1214, 1344, 1484, 1514, 1619
BstDSI CCRYGG 1 cut(s) 214
BstF5I GGATG 2 cut(s) 476, 1707
BstFNI CGCG 1 cut(s) 216
BstHHI GCGC 1 cut(s) 1176
BstKTI GATC 5 cut(s) 319, 580, 585, 637, 1669
BstMAI GTCTC 4 cut(s) 47, 332, 442, 1035
BstMBI GATC 5 cut(s) 316, 577, 582, 634, 1666
BstMCI CGRYCG 1 cut(s) 186
BstNI CCWGG 1 cut(s) 30
BstNSI RCATGY 1 cut(s) 843
BstPAI GACNNNNGTC 1 cut(s) 434
BstSCI CCNGG 4 cut(s) 19, 28, 56, 124
BstSFI CTRYAG 1 cut(s) 404
BstSLI GKGCMC 1 cut(s) 99
BstUI CGCG 1 cut(s) 216
BstV2I GAAGAC 2 cut(s) 788, 950
BstX2I RGATCY 1 cut(s) 316
BstYI RGATCY 1 cut(s) 316
BsuI GTATCC 1 cut(s) 219
BsuRI GGCC 4 cut(s) 5, 213, 1208, 1572
BtgI CCRYGG 1 cut(s) 214
BtsCI GGATG 2 cut(s) 476, 1707
Cac8I GCNNGC 2 cut(s) 297, 526
CaiI CAGNNNCTG 2 cut(s) 1007, 1076
CfoI GCGC 1 cut(s) 1176
Cfr13I GGNCC 3 cut(s) 48, 1340, 1469
Cfr42I CCGCGG 1 cut(s) 217
CviAII CATG 5 cut(s) 92, 533, 840, 1171, 1613
DdeI CTNAG 7 cut(s) 1077, 1137, 1214, 1344, 1484, 1514, 1619
DpnI GATC 5 cut(s) 318, 579, 584, 636, 1668
DpnII GATC 5 cut(s) 316, 577, 582, 634, 1666
DraIII CACNNNGTG 1 cut(s) 1591
EaeI YGGCCR 4 cut(s) 3, 211, 1206, 1570
Eam1104I CTCTTC 3 cut(s) 183, 261, 381
EarI CTCTTC 3 cut(s) 183, 261, 381
EciI GGCGGA 2 cut(s) 111, 167
Eco130I CCWWGG 1 cut(s) 616
Eco24I GRGCYC 1 cut(s) 1052
Eco31I GGTCTC 1 cut(s) 47
Eco47I GGWCC 3 cut(s) 48, 1340, 1469
Eco57I CTGAAG 1 cut(s) 1557
Eco72I CACGTG 1 cut(s) 541
Eco88I CYCGRG 1 cut(s) 115
EcoO109I RGGNCCY 1 cut(s) 1340
EcoRI GAATTC 2 cut(s) 550, 832
EcoRII CCWGG 1 cut(s) 28
EcoT14I CCWWGG 1 cut(s) 616
EcoT38I GRGCYC 1 cut(s) 1052
ErhI CCWWGG 1 cut(s) 616
FaeI CATG 5 cut(s) 95, 536, 843, 1174, 1616
FaqI GGGAC 4 cut(s) 37, 97, 543, 1353
FatI CATG 5 cut(s) 91, 532, 839, 1170, 1612
FauI CCCGC 2 cut(s) 177, 209
FauNDI CATATG 1 cut(s) 858
FbaI TGATCA 1 cut(s) 1666
FokI GGATG 2 cut(s) 463, 1694
FriOI GRGCYC 1 cut(s) 1052
FspBI CTAG 4 cut(s) 335, 353, 1160, 1310
GlaI GCGC 1 cut(s) 1175
GsaI CCCAGC 1 cut(s) 1339
GsuI CTGGAG 2 cut(s) 773, 1313
HaeIII GGCC 4 cut(s) 5, 213, 1208, 1572
HapII CCGG 3 cut(s) 20, 57, 125
HhaI GCGC 1 cut(s) 1176
Hin1II CATG 5 cut(s) 95, 536, 843, 1174, 1616
Hin6I GCGC 1 cut(s) 1174
HinP1I GCGC 1 cut(s) 1174
HincII GTYRAC 1 cut(s) 1491
HindII GTYRAC 1 cut(s) 1491
HinfI GANTC 3 cut(s) 118, 508, 646
HpaII CCGG 3 cut(s) 20, 57, 125
HphI GGTGA 2 cut(s) 655, 1398
Hpy166II GTNNAC 2 cut(s) 1256, 1491
Hpy188I TCNGA 9 cut(s) 52, 64, 245, 321, 460, 582, 1422, 1431, 1620
Hpy188III TCNNGA 7 cut(s) 575, 586, 1070, 1130, 1150, 1319, 1330
Hpy8I GTNNAC 2 cut(s) 1256, 1491
Hpy99I CGWCG 1 cut(s) 751
HpyAV CCTTC 4 cut(s) 277, 307, 322, 1076
HpyCH4III ACNGT 4 cut(s) 15, 433, 1253, 1495
HpyCH4IV ACGT 2 cut(s) 540, 1567
HpyCH4V TGCA 8 cut(s) 406, 682, 737, 803, 862, 968, 1585, 1643
HpyF3I CTNAG 7 cut(s) 1077, 1137, 1214, 1344, 1484, 1514, 1619
HpySE526I ACGT 2 cut(s) 540, 1567
Hsp92II CATG 5 cut(s) 95, 536, 843, 1174, 1616
HspAI GCGC 1 cut(s) 1174
Ksp22I TGATCA 1 cut(s) 1666
KspI CCGCGG 1 cut(s) 217
Kzo9I GATC 5 cut(s) 316, 577, 582, 634, 1666
LguI GCTCTTC 1 cut(s) 381
LmnI GCTCC 4 cut(s) 101, 292, 331, 853
LweI GCATC 4 cut(s) 42, 790, 908, 1156
MaeI CTAG 4 cut(s) 335, 353, 1160, 1310
MaeII ACGT 2 cut(s) 540, 1567
MaeIII GTNAC 2 cut(s) 196, 1349
MalI GATC 5 cut(s) 318, 579, 584, 636, 1668
MboI GATC 5 cut(s) 316, 577, 582, 634, 1666
MflI RGATCY 1 cut(s) 316
MhlI GDGCHC 3 cut(s) 99, 540, 1052
MlsI TGGCCA 2 cut(s) 1208, 1572
MluCI AATT 9 cut(s) 550, 568, 819, 832, 863, 1179, 1259, 1290, 1396
MluNI TGGCCA 2 cut(s) 1208, 1572
MlyI GAGTC 1 cut(s) 127
MmeI TCCRAC 2 cut(s) 42, 288
Mox20I TGGCCA 2 cut(s) 1208, 1572
MroXI GAANNNNTTC 3 cut(s) 15, 1608, 1697
MscI TGGCCA 2 cut(s) 1208, 1572
MseI TTAA 3 cut(s) 867, 1245, 1631
MslI CAYNNNNRTG 2 cut(s) 516, 776
Msp20I TGGCCA 2 cut(s) 1208, 1572
MspA1I CMGCKG 2 cut(s) 216, 403
MspI CCGG 3 cut(s) 20, 57, 125
MspR9I CCNGG 4 cut(s) 21, 30, 58, 126
MvaI CCWGG 1 cut(s) 30
MvnI CGCG 1 cut(s) 216
NciI CCSGG 3 cut(s) 21, 58, 126
NdeI CATATG 1 cut(s) 858
NdeII GATC 5 cut(s) 316, 577, 582, 634, 1666
NlaIII CATG 5 cut(s) 95, 536, 843, 1174, 1616
NlaIV GGNNCC 2 cut(s) 1341, 1470
NmuCI GTSAC 2 cut(s) 196, 1349
NspI RCATGY 1 cut(s) 843
NspV TTCGAA 1 cut(s) 894
PciSI GCTCTTC 1 cut(s) 381
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PdmI GAANNNNTTC 3 cut(s) 15, 1608, 1697
PfeI GAWTC 2 cut(s) 508, 646
PflFI GACNNNGTC 1 cut(s) 58
PleI GAGTC 1 cut(s) 126
PmaCI CACGTG 1 cut(s) 541
PmlI CACGTG 1 cut(s) 541
PpsI GAGTC 1 cut(s) 126
Ppu21I YACGTR 1 cut(s) 541
PpuMI RGGWCCY 1 cut(s) 1340
PshAI GACNNNNGTC 1 cut(s) 434
PsiI TTATAA 2 cut(s) 1377, 1416
Psp5II RGGWCCY 1 cut(s) 1340
Psp6I CCWGG 1 cut(s) 28
PspCI CACGTG 1 cut(s) 541
PspFI CCCAGC 1 cut(s) 1335
PspGI CCWGG 1 cut(s) 28
PspN4I GGNNCC 2 cut(s) 1341, 1470
PspPI GGNCC 3 cut(s) 48, 1340, 1469
PspPPI RGGWCCY 1 cut(s) 1340
PstI CTGCAG 1 cut(s) 408
PstNI CAGNNNCTG 2 cut(s) 1007, 1076
PsuI RGATCY 1 cut(s) 316
PsyI GACNNNGTC 1 cut(s) 58
PvuII CAGCTG 1 cut(s) 403
RseI CAYNNNNRTG 2 cut(s) 516, 776
SacII CCGCGG 1 cut(s) 217
SapI GCTCTTC 1 cut(s) 381
SaqAI TTAA 3 cut(s) 867, 1245, 1631
Sau3AI GATC 5 cut(s) 316, 577, 582, 634, 1666
Sau96I GGNCC 3 cut(s) 48, 1340, 1469
SchI GAGTC 1 cut(s) 127
ScrFI CCNGG 4 cut(s) 21, 30, 58, 126
SduI GDGCHC 3 cut(s) 99, 540, 1052
SfaNI GCATC 4 cut(s) 42, 790, 908, 1156
SfcI CTRYAG 1 cut(s) 404
Sfr303I CCGCGG 1 cut(s) 217
SfuI TTCGAA 1 cut(s) 894
SgrBI CCGCGG 1 cut(s) 217
SinI GGWCC 3 cut(s) 48, 1340, 1469
SmiMI CAYNNNNRTG 2 cut(s) 516, 776
SmlI CTYRAG 3 cut(s) 145, 1128, 1317
SmoI CTYRAG 3 cut(s) 145, 1128, 1317
Sse9I AATT 9 cut(s) 550, 568, 819, 832, 863, 1179, 1259, 1290, 1396
SsiI CCGC 7 cut(s) 6, 122, 152, 170, 214, 216, 397
SspMI CTAG 4 cut(s) 335, 353, 1160, 1310
StyD4I CCNGG 4 cut(s) 19, 28, 56, 124
StyI CCWWGG 1 cut(s) 616
TaaI ACNGT 4 cut(s) 15, 433, 1253, 1495
TaiI ACGT 2 cut(s) 543, 1570
TaqI TCGA 3 cut(s) 186, 384, 894
TaqII GACCGA 1 cut(s) 172
TasI AATT 9 cut(s) 550, 568, 819, 832, 863, 1179, 1259, 1290, 1396
TauI GCSGC 3 cut(s) 8, 216, 400
TfiI GAWTC 2 cut(s) 508, 646
Tru1I TTAA 3 cut(s) 867, 1245, 1631
Tru9I TTAA 3 cut(s) 867, 1245, 1631
TseFI GTSAC 2 cut(s) 196, 1349
Tsp45I GTSAC 2 cut(s) 196, 1349
TspGWI ACGGA 3 cut(s) 59, 114, 605
Tth111I GACNNNGTC 1 cut(s) 58
VpaK11BI GGWCC 3 cut(s) 48, 1340, 1469
XapI RAATTY 3 cut(s) 550, 819, 832
XceI RCATGY 1 cut(s) 843
XmnI GAANNNNTTC 3 cut(s) 15, 1608, 1697
XspI CTAG 4 cut(s) 335, 353, 1160, 1310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.