MD02G1123900.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
10097368 .. 10100239
2872 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1123900.v1.1.491

Sequence Viewer

Length: 1407 bp
ATGGAAATGCGACGCCAGTTGGCGGTGGCTTCACCACCATCTCGAAGTTTTGTTCATGCTCATCACATACACATGTTGGGAGGCTTTGTTGTTGGCATTCTGTCAGTTTTGATAGTGGCCTTGTTATACTACTTGATCAAGAAGAAGCTCCTACCAACTCTCAGGCAAAGACAATTACTACATGAGCATGGACAGAAAGGAAATTTGAAAGAAGAGAAAATAACGTTGAGGCGCTTCCAGTTGGATGAACTAGTGAAGGCTACTAATAATTTCAGCGGTGAGTGCTTGTTGGGTTCCGGTGGTTTTGCAAATGTCTACAAGGGGACCTTTGATGATGCAGGAACCGTAGCCGTTAAGCGAGCCCACGCCGATTCATTTCAGAGTGTCGAAGAATTCAGAAACGTGAGGCTACTTTCTAAGGTCAAGCACAGAAACCTTGTAGGTTTGGTTGGATATTGTGAAGGATCATCTGGAGCAAAAGGAGGAAAAGTATTGATCTATGAATATGTACCAAATGGTTCTCTCCTTGATTACTTTATGGGAAGAAAATGGAGGAGCTTAACTTGGAGGCAAAGAGTCAACATAGCCATTGGAGCAGCAAAAGGCATTGCTCATTTGCATGAAGGAGTAAACCCGAGCATAATCCACCGTGATATAAAGCCGAGTAACATCTTGATAGGAGATGGATTTGAAGCCAAGGTTTCAGATTTTGGACTTGTTAGGTCAGGGCCTACTGGGGATCAATCACATGTCAGCAGCCAAATCAAAGGAACTCCAGGATACCTAGACCCTGCCTATTGTTCAAGTTTCCATTTGACACCGTTTAGCGATGTCTATAGCTTTGGTGTGATACTTCTGCAGCTTATTTCTTCCCGGCCTGCGGTTGATTCAACAGGCCACCGCCCTAAGCAGCATATAATTGACTGGGCAAGACCAAGCTTAGAGCAAGGCCGCGTTGAGCAGATTTTAGATGCAAATCTTTTAACAGAGCCATGTAACACTGAGATGATGCTAAAGATGGGGAAACTTGGCCTAAGATGTGTTGTGAAAGTGCCCAAAAACCGCCCTACCATGTCGCAAGTGTTGAAAGAACTCGAAGAGGCCCTCGACTCTGCAGACAACTTCATTAGCAAACAGCCTTCTGGGGGATCTCGAAGATCAACTGGCACGTTCCACCTACCATCAGAGCTAGGGCATAGAAGATCGATGGACTACGACCAGTCTCAAAACTCAGTGAGCATAGATGGCATTGGACTCCAGAGGTTTCATGTCGACGTAGATAGCCTCTCCTTTCAGAGCACGAGCTTAAGGTGTTTGGAGTTGAACGATAGCAGCATCGATATTGACATCGAAAATTGGGAAGATATACATGAGGAGTCTATTAGAGAAAAAGAACTGAACATGTAA

Protein Analysis

469

Amino Acids

52.15

Weight (kDa)

8.59

Isoelectric Point (pI)

51.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 96 - 365 9.9e-36 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 96 - 363 7.2e-35 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014635)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 315, 1272
AccII CGCG 1 cut(s) 954
AciI CCGC 6 cut(s) 23, 276, 881, 901, 952, 1063
AclI AACGTT 1 cut(s) 224
AclWI GGATC 3 cut(s) 472, 747, 1156
AcsI RAATTY 2 cut(s) 202, 392
AcyI GRCGYC 1 cut(s) 13
AfaI GTAC 1 cut(s) 510
AfiI CCNNNNNNNGG 3 cut(s) 22, 880, 1145
AflII CTTAAG 1 cut(s) 1306
AflIII ACRYGT 3 cut(s) 72, 748, 1401
AgsI TTSAA 6 cut(s) 208, 692, 804, 891, 1087, 1324
AhlI ACTAGT 1 cut(s) 250
AjnI CCWGG 1 cut(s) 775
AluBI AGCT 7 cut(s) 148, 558, 840, 862, 939, 1189, 1305
AluI AGCT 7 cut(s) 148, 558, 840, 862, 939, 1189, 1305
Alw21I GWGCWC 1 cut(s) 1301
Alw26I GTCTC 1 cut(s) 1227
AlwI GGATC 3 cut(s) 472, 747, 1156
Ama87I CYCGRG 1 cut(s) 634
AoxI GGCC 7 cut(s) 117, 728, 875, 895, 949, 1030, 1101
ApeKI GCWGC 5 cut(s) 596, 756, 859, 910, 1332
ApoI RAATTY 2 cut(s) 202, 392
AspLEI GCGC 1 cut(s) 234
AspS9I GGNCC 3 cut(s) 324, 728, 1102
AsuC2I CCSGG 1 cut(s) 874
AsuHPI GGTGA 2 cut(s) 24, 290
AvaI CYCGRG 1 cut(s) 634
AvaII GGWCC 1 cut(s) 324
BaeGI GKGCMC 1 cut(s) 1056
BanII GRGCYC 1 cut(s) 364
BauI CACGAG 1 cut(s) 1300
Bbv12I GWGCWC 1 cut(s) 1301
BbvI GCAGC 5 cut(s) 608, 768, 871, 922, 1344
BccI CCATC 6 cut(s) 46, 677, 1012, 1189, 1201, 1238
BceAI ACGGC 1 cut(s) 335
BciT130I CCWGG 1 cut(s) 777
BciVI GTATCC 1 cut(s) 773
BclI TGATCA 1 cut(s) 135
BcnI CCSGG 1 cut(s) 874
BcoDI GTCTC 1 cut(s) 1227
BcuI ACTAGT 1 cut(s) 250
BfaI CTAG 3 cut(s) 251, 785, 1190
BfmI CTRYAG 3 cut(s) 835, 857, 1113
BfoI RGCGCY 1 cut(s) 235
BfrI CTTAAG 1 cut(s) 1306
BfuI GTATCC 1 cut(s) 773
BisI GCNGC 6 cut(s) 597, 757, 860, 911, 952, 1333
BlsI GCNGC 6 cut(s) 598, 758, 861, 912, 953, 1334
Bme1390I CCNGG 2 cut(s) 777, 874
Bme18I GGWCC 1 cut(s) 324
BmeT110I CYCGRG 1 cut(s) 634
BmgT120I GGNCC 3 cut(s) 324, 728, 1102
BmiI GGNNCC 3 cut(s) 295, 325, 343
BmrFI CCNGG 2 cut(s) 777, 874
BmrI ACTGGG 2 cut(s) 744, 934
BmsI GCATC 4 cut(s) 325, 961, 999, 1344
BmuI ACTGGG 2 cut(s) 744, 934
BpmI CTGGAG 3 cut(s) 492, 759, 1241
Bpu10I CCTNAGC 1 cut(s) 906
BpuMI CCSGG 1 cut(s) 874
Bsa29I ATCGAT 2 cut(s) 1205, 1338
BsaBI GATNNNNATC 1 cut(s) 975
BsaHI GRCGYC 1 cut(s) 13
BsaJI CCNNGG 1 cut(s) 696
BsaWI WCCGGW 1 cut(s) 296
BsaXI ACNNNNNCTCC 4 cut(s) 72, 102, 474, 504
Bsc4I CCNNNNNNNGG 3 cut(s) 22, 880, 1145
Bse1I ACTGG 6 cut(s) 16, 238, 739, 929, 1168, 1219
Bse3DI GCAATG 1 cut(s) 606
Bse8I GATNNNNATC 1 cut(s) 975
BseBI CCWGG 1 cut(s) 777
BseCI ATCGAT 2 cut(s) 1205, 1338
BseDI CCNNGG 1 cut(s) 696
BseGI GGATG 1 cut(s) 250
BseJI GATNNNNATC 1 cut(s) 975
BseLI CCNNNNNNNGG 3 cut(s) 22, 880, 1145
BseMI GCAATG 1 cut(s) 606
BseMII CTCAG 3 cut(s) 175, 993, 1245
BseNI ACTGG 6 cut(s) 16, 238, 739, 929, 1168, 1219
BseRI GAGGAG 2 cut(s) 568, 1388
BseSI GKGCMC 1 cut(s) 1056
BseXI GCAGC 5 cut(s) 608, 768, 871, 922, 1344
Bsh1236I CGCG 1 cut(s) 954
BshFI GGCC 7 cut(s) 119, 730, 877, 897, 951, 1032, 1103
BshVI ATCGAT 2 cut(s) 1205, 1338
BsiHKAI GWGCWC 1 cut(s) 1301
BsiHKCI CYCGRG 1 cut(s) 634
BsiSI CCGG 2 cut(s) 297, 874
BslFI GGGAC 1 cut(s) 337
BslI CCNNNNNNNGG 3 cut(s) 22, 880, 1145
BsmAI GTCTC 1 cut(s) 1227
BsmFI GGGAC 1 cut(s) 337
BsmI GAATGC 1 cut(s) 96
BsnI GGCC 7 cut(s) 119, 730, 877, 897, 951, 1032, 1103
BsoBI CYCGRG 1 cut(s) 634
Bsp1286I GDGCHC 3 cut(s) 364, 1056, 1301
Bsp143I GATC 7 cut(s) 135, 464, 495, 739, 1148, 1157, 1202
BspACI CCGC 6 cut(s) 23, 276, 881, 901, 952, 1063
BspANI GGCC 7 cut(s) 119, 730, 877, 897, 951, 1032, 1103
BspCNI CTCAG 3 cut(s) 174, 994, 1244
BspDI ATCGAT 2 cut(s) 1205, 1338
BspFNI CGCG 1 cut(s) 954
BspLI GGNNCC 3 cut(s) 295, 325, 343
BspMAI CTGCAG 2 cut(s) 861, 1117
BspPI GGATC 3 cut(s) 472, 747, 1156
BspTI CTTAAG 1 cut(s) 1306
BsrDI GCAATG 1 cut(s) 606
BsrI ACTGG 6 cut(s) 16, 238, 739, 929, 1168, 1219
BssECI CCNNGG 1 cut(s) 696
BssMI GATC 7 cut(s) 135, 464, 495, 739, 1148, 1157, 1202
BssNI GRCGYC 1 cut(s) 13
BssSI CACGAG 1 cut(s) 1300
BssT1I CCWWGG 1 cut(s) 696
Bst2BI CACGAG 1 cut(s) 1300
Bst2UI CCWGG 1 cut(s) 777
Bst4CI ACNGT 3 cut(s) 346, 650, 822
Bst6I CTCTTC 2 cut(s) 207, 1092
BstACI GRCGYC 1 cut(s) 13
BstAFI CTTAAG 1 cut(s) 1306
BstC8I GCNNGC 2 cut(s) 360, 879
BstDEI CTNAG 7 cut(s) 161, 417, 906, 940, 1002, 1034, 1231
BstF5I GGATG 1 cut(s) 250
BstFNI CGCG 1 cut(s) 954
BstH2I RGCGCY 1 cut(s) 235
BstHHI GCGC 1 cut(s) 234
BstKTI GATC 7 cut(s) 138, 467, 498, 742, 1151, 1160, 1205
BstMAI GTCTC 1 cut(s) 1227
BstMBI GATC 7 cut(s) 135, 464, 495, 739, 1148, 1157, 1202
BstMWI GCNNNNNNNGC 3 cut(s) 282, 593, 1245
BstNI CCWGG 1 cut(s) 777
BstNSI RCATGY 3 cut(s) 76, 752, 1405
BstSCI CCNGG 2 cut(s) 775, 872
BstSFI CTRYAG 3 cut(s) 835, 857, 1113
BstSLI GKGCMC 1 cut(s) 1056
BstUI CGCG 1 cut(s) 954
BstV1I GCAGC 5 cut(s) 608, 768, 871, 922, 1344
BstX2I RGATCY 1 cut(s) 1148
BstYI RGATCY 1 cut(s) 1148
Bsu15I ATCGAT 2 cut(s) 1205, 1338
BsuI GTATCC 1 cut(s) 773
BsuRI GGCC 7 cut(s) 119, 730, 877, 897, 951, 1032, 1103
BsuTUI ATCGAT 2 cut(s) 1205, 1338
BtgZI GCGATG 1 cut(s) 843
BtsCI GGATG 1 cut(s) 250
BtsIMutI CAGTG 2 cut(s) 999, 1239
Cac8I GCNNGC 2 cut(s) 360, 879
CfoI GCGC 1 cut(s) 234
Cfr13I GGNCC 3 cut(s) 324, 728, 1102
ClaI ATCGAT 2 cut(s) 1205, 1338
CseI GACGC 1 cut(s) 21
Csp6I GTAC 1 cut(s) 509
CviQI GTAC 1 cut(s) 509
DdeI CTNAG 7 cut(s) 161, 417, 906, 940, 1002, 1034, 1231
DpnI GATC 7 cut(s) 137, 466, 497, 741, 1150, 1159, 1204
DpnII GATC 7 cut(s) 135, 464, 495, 739, 1148, 1157, 1202
Eam1104I CTCTTC 2 cut(s) 207, 1092
EarI CTCTTC 2 cut(s) 207, 1092
Eco130I CCWWGG 1 cut(s) 696
Eco24I GRGCYC 1 cut(s) 364
Eco47I GGWCC 1 cut(s) 324
Eco88I CYCGRG 1 cut(s) 634
EcoO109I RGGNCCY 3 cut(s) 324, 728, 1102
EcoRI GAATTC 1 cut(s) 392
EcoRII CCWGG 1 cut(s) 775
EcoT14I CCWWGG 1 cut(s) 696
EcoT38I GRGCYC 1 cut(s) 364
ErhI CCWWGG 1 cut(s) 696
FalI AAGNNNNNCTT 2 cut(s) 311, 343
FaqI GGGAC 1 cut(s) 337
FbaI TGATCA 1 cut(s) 135
FblI GTMKAC 2 cut(s) 315, 1272
Fnu4HI GCNGC 6 cut(s) 597, 757, 860, 911, 952, 1333
FokI GGATG 1 cut(s) 257
FriOI GRGCYC 1 cut(s) 364
Fsp4HI GCNGC 6 cut(s) 597, 757, 860, 911, 952, 1333
FspBI CTAG 3 cut(s) 251, 785, 1190
GlaI GCGC 1 cut(s) 233
GluI GCNGC 6 cut(s) 597, 757, 860, 911, 952, 1333
GsuI CTGGAG 3 cut(s) 492, 759, 1241
HaeII RGCGCY 1 cut(s) 235
HaeIII GGCC 7 cut(s) 119, 730, 877, 897, 951, 1032, 1103
HapII CCGG 2 cut(s) 297, 874
HgaI GACGC 1 cut(s) 21
HhaI GCGC 1 cut(s) 234
Hin1I GRCGYC 1 cut(s) 13
Hin6I GCGC 1 cut(s) 232
HinP1I GCGC 1 cut(s) 232
HincII GTYRAC 2 cut(s) 580, 1273
HindII GTYRAC 2 cut(s) 580, 1273
HindIII AAGCTT 1 cut(s) 937
HinfI GANTC 6 cut(s) 371, 576, 887, 1109, 1254, 1376
HpaII CCGG 2 cut(s) 297, 874
HphI GGTGA 2 cut(s) 24, 290
Hpy166II GTNNAC 4 cut(s) 316, 580, 631, 1273
Hpy188I TCNGA 5 cut(s) 381, 398, 706, 1186, 1296
Hpy188III TCNNGA 6 cut(s) 42, 139, 471, 673, 1152, 1258
Hpy8I GTNNAC 4 cut(s) 316, 580, 631, 1273
Hpy99I CGWCG 2 cut(s) 15, 1277
HpyAV CCTTC 4 cut(s) 250, 455, 617, 1149
HpyCH4III ACNGT 3 cut(s) 346, 650, 822
HpyCH4IV ACGT 4 cut(s) 224, 402, 1169, 1275
HpyCH4V TGCA 6 cut(s) 308, 338, 619, 859, 974, 1115
HpyF10VI GCNNNNNNNGC 3 cut(s) 282, 593, 1245
HpyF3I CTNAG 7 cut(s) 161, 417, 906, 940, 1002, 1034, 1231
HpySE526I ACGT 4 cut(s) 224, 402, 1169, 1275
Hsp92I GRCGYC 1 cut(s) 13
HspAI GCGC 1 cut(s) 232
Ksp22I TGATCA 1 cut(s) 135
Kzo9I GATC 7 cut(s) 135, 464, 495, 739, 1148, 1157, 1202
LmnI GCTCC 4 cut(s) 153, 473, 555, 593
Lsp1109I GCAGC 5 cut(s) 608, 768, 871, 922, 1344
LweI GCATC 4 cut(s) 325, 961, 999, 1344
MaeI CTAG 3 cut(s) 251, 785, 1190
MaeII ACGT 4 cut(s) 224, 402, 1169, 1275
MaeIII GTNAC 2 cut(s) 665, 995
MalI GATC 7 cut(s) 137, 466, 497, 741, 1150, 1159, 1204
MboI GATC 7 cut(s) 135, 464, 495, 739, 1148, 1157, 1202
MboII GAAGA 9 cut(s) 154, 224, 401, 555, 861, 1109, 1167, 1212, 1373
MflI RGATCY 1 cut(s) 1148
MhlI GDGCHC 3 cut(s) 364, 1056, 1301
MluCI AATT 6 cut(s) 173, 202, 268, 392, 918, 1354
MlyI GAGTC 4 cut(s) 585, 1103, 1248, 1385
MmeI TCCRAC 2 cut(s) 222, 430
MseI TTAA 4 cut(s) 354, 560, 983, 1307
MslI CAYNNNNRTG 4 cut(s) 71, 186, 618, 1004
MspA1I CMGCKG 1 cut(s) 276
MspCI CTTAAG 1 cut(s) 1306
MspI CCGG 2 cut(s) 297, 874
MspR9I CCNGG 2 cut(s) 777, 874
Mva1269I GAATGC 1 cut(s) 96
MvaI CCWGG 1 cut(s) 777
MvnI CGCG 1 cut(s) 954
MwoI GCNNNNNNNGC 3 cut(s) 282, 593, 1245
NciI CCSGG 1 cut(s) 874
NdeII GATC 7 cut(s) 135, 464, 495, 739, 1148, 1157, 1202
NlaIV GGNNCC 3 cut(s) 295, 325, 343
NmeAIII GCCGAG 1 cut(s) 687
NspI RCATGY 3 cut(s) 76, 752, 1405
PciI ACATGT 3 cut(s) 72, 748, 1401
PctI GAATGC 1 cut(s) 96
PfeI GAWTC 2 cut(s) 371, 887
PfoI TCCNGGA 1 cut(s) 775
PkrI GCNGC 6 cut(s) 598, 758, 861, 912, 953, 1334
PleI GAGTC 4 cut(s) 584, 1103, 1248, 1384
PpsI GAGTC 4 cut(s) 584, 1103, 1248, 1384
PpuMI RGGWCCY 1 cut(s) 324
PscI ACATGT 3 cut(s) 72, 748, 1401
Psp1406I AACGTT 1 cut(s) 224
Psp5II RGGWCCY 1 cut(s) 324
Psp6I CCWGG 1 cut(s) 775
PspGI CCWGG 1 cut(s) 775
PspN4I GGNNCC 3 cut(s) 295, 325, 343
PspPI GGNCC 3 cut(s) 324, 728, 1102
PspPPI RGGWCCY 1 cut(s) 324
PstI CTGCAG 2 cut(s) 861, 1117
PsuI RGATCY 1 cut(s) 1148
RsaI GTAC 1 cut(s) 510
RsaNI GTAC 1 cut(s) 509
RseI CAYNNNNRTG 4 cut(s) 71, 186, 618, 1004
SalI GTCGAC 1 cut(s) 1271
SaqAI TTAA 4 cut(s) 354, 560, 983, 1307
SatI GCNGC 6 cut(s) 597, 757, 860, 911, 952, 1333
Sau3AI GATC 7 cut(s) 135, 464, 495, 739, 1148, 1157, 1202
Sau96I GGNCC 3 cut(s) 324, 728, 1102
SchI GAGTC 4 cut(s) 585, 1103, 1248, 1385
ScrFI CCNGG 2 cut(s) 777, 874
SduI GDGCHC 3 cut(s) 364, 1056, 1301
SfaNI GCATC 4 cut(s) 325, 961, 999, 1344
SfcI CTRYAG 3 cut(s) 835, 857, 1113
SinI GGWCC 1 cut(s) 324
SmiMI CAYNNNNRTG 4 cut(s) 71, 186, 618, 1004
SmlI CTYRAG 1 cut(s) 1306
SmoI CTYRAG 1 cut(s) 1306
SpeI ACTAGT 1 cut(s) 250
Sse9I AATT 6 cut(s) 173, 202, 268, 392, 918, 1354
SsiI CCGC 6 cut(s) 23, 276, 881, 901, 952, 1063
SspMI CTAG 3 cut(s) 251, 785, 1190
StyD4I CCNGG 2 cut(s) 775, 872
StyI CCWWGG 1 cut(s) 696
TaaI ACNGT 3 cut(s) 346, 650, 822
TaiI ACGT 4 cut(s) 227, 405, 1172, 1278
TaqI TCGA 9 cut(s) 43, 387, 1095, 1107, 1153, 1205, 1272, 1338, 1350
TasI AATT 6 cut(s) 173, 202, 268, 392, 918, 1354
TauI GCSGC 1 cut(s) 954
TfiI GAWTC 2 cut(s) 371, 887
Tru1I TTAA 4 cut(s) 354, 560, 983, 1307
Tru9I TTAA 4 cut(s) 354, 560, 983, 1307
TscAI CASTG 2 cut(s) 1006, 1239
TseI GCWGC 5 cut(s) 596, 756, 859, 910, 1332
TspDTI ATGAA 7 cut(s) 44, 261, 363, 516, 636, 1114, 1256
TspRI CASTG 2 cut(s) 1006, 1239
Vha464I CTTAAG 1 cut(s) 1306
VpaK11BI GGWCC 1 cut(s) 324
XapI RAATTY 2 cut(s) 202, 392
XceI RCATGY 3 cut(s) 76, 752, 1405
XmiI GTMKAC 2 cut(s) 315, 1272
XspI CTAG 3 cut(s) 251, 785, 1190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.