Belongs to the protein kinase superfamily
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g11130 |
| malus_domestica | MD02G1123900.v1.1 MD15G1237900.v1.1 |
| prunus_persica | Prupe.7G174600_v2.0.a1 Prupe.7G174600_v2.0.a1 Prupe.7G174600_v2.0.a1 |
| pyrus_communis | pycom02g09680 |
| rosa_chinensis | RchiOBHm_Chr2g0098411 |
| rosa_laevigata | RLG00000016797 |
| rosa_multiflora | Rmu_ssc0000196.1_g000021 |
| rosa_roxburghii | Rroxscaffold_2G00143990 |
| rosa_rugosa | Rorug02G0073000 |
| rosa_samantha | Rh2AG120300 Rh2BG123100 Rh2CG124700 Rh2DG124800 |
| rosa_wichuraiana | Rw2G009410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 921 |
| AccB1I | GGYRCC | 1 cut(s) | 921 |
| AccI | GTMKAC | 2 cut(s) | 1309, 1404 |
| AccII | CGCG | 2 cut(s) | 233, 355 |
| AciI | CCGC | 4 cut(s) | 233, 353, 424, 473 |
| AcoI | YGGCCR | 1 cut(s) | 425 |
| AcsI | RAATTY | 1 cut(s) | 671 |
| AfaI | GTAC | 3 cut(s) | 923, 1500, 1516 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 359, 406, 427, 434, 462, 476, 523 |
| AflII | CTTAAG | 1 cut(s) | 1438 |
| AflIII | ACRYGT | 2 cut(s) | 204, 889 |
| AgeI | ACCGGT | 2 cut(s) | 406, 455 |
| AgsI | TTSAA | 8 cut(s) | 149, 310, 487, 553, 668, 833, 1466, 1492 |
| AhlI | ACTAGT | 1 cut(s) | 529 |
| AjiI | CACGTC | 1 cut(s) | 74 |
| AjnI | CCWGG | 3 cut(s) | 624, 916, 1218 |
| AleI | CACNNNNGTG | 1 cut(s) | 1145 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 100, 132 |
| AluBI | AGCT | 3 cut(s) | 641, 981, 1437 |
| AluI | AGCT | 3 cut(s) | 641, 981, 1437 |
| Alw21I | GWGCWC | 3 cut(s) | 643, 1303, 1433 |
| Alw26I | GTCTC | 2 cut(s) | 552, 873 |
| Alw44I | GTGCAC | 1 cut(s) | 1299 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 561, 872 |
| Ama87I | CYCGRG | 1 cut(s) | 224 |
| AoxI | GGCC | 4 cut(s) | 425, 869, 1016, 1073 |
| ApaLI | GTGCAC | 1 cut(s) | 1299 |
| ApeKI | GCWGC | 1 cut(s) | 737 |
| ApoI | RAATTY | 1 cut(s) | 671 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1310, 1342 |
| AsiGI | ACCGGT | 2 cut(s) | 406, 455 |
| Asp718I | GGTACC | 1 cut(s) | 921 |
| AspA2I | CCTAGG | 1 cut(s) | 1321 |
| AspLEI | GCGC | 1 cut(s) | 238 |
| AspS9I | GGNCC | 2 cut(s) | 244, 869 |
| AsuC2I | CCSGG | 1 cut(s) | 1015 |
| AsuHPI | GGTGA | 8 cut(s) | 72, 323, 421, 424, 445, 470, 779, 1159 |
| AvaI | CYCGRG | 1 cut(s) | 224 |
| AvaII | GGWCC | 1 cut(s) | 244 |
| AvrII | CCTAGG | 1 cut(s) | 1321 |
| BaeGI | GKGCMC | 1 cut(s) | 1303 |
| BanI | GGYRCC | 1 cut(s) | 921 |
| BanII | GRGCYC | 1 cut(s) | 643 |
| BauI | CACGAG | 2 cut(s) | 26, 335 |
| BbsI | GAAGAC | 1 cut(s) | 1530 |
| Bbv12I | GWGCWC | 3 cut(s) | 643, 1303, 1433 |
| BbvI | GCAGC | 1 cut(s) | 749 |
| BccI | CCATC | 5 cut(s) | 458, 525, 818, 1153, 1472 |
| BceAI | ACGGC | 1 cut(s) | 1393 |
| BciT130I | CCWGG | 3 cut(s) | 626, 918, 1220 |
| BclI | TGATCA | 2 cut(s) | 411, 1348 |
| BcnI | CCSGG | 1 cut(s) | 1015 |
| BcoDI | GTCTC | 2 cut(s) | 552, 873 |
| BcuI | ACTAGT | 1 cut(s) | 529 |
| BfaI | CTAG | 6 cut(s) | 530, 1077, 1082, 1322, 1373, 1409 |
| BfmI | CTRYAG | 4 cut(s) | 34, 873, 976, 1254 |
| BfoI | RGCGCY | 1 cut(s) | 239 |
| BfrI | CTTAAG | 1 cut(s) | 1438 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1377 |
| BglII | AGATCT | 1 cut(s) | 502 |
| BisI | GCNGC | 3 cut(s) | 234, 425, 738 |
| BlnI | CCTAGG | 1 cut(s) | 1321 |
| BlsI | GCNGC | 3 cut(s) | 235, 426, 739 |
| Bme1390I | CCNGG | 4 cut(s) | 626, 918, 1015, 1220 |
| Bme18I | GGWCC | 1 cut(s) | 244 |
| BmeT110I | CYCGRG | 1 cut(s) | 224 |
| BmgBI | CACGTC | 1 cut(s) | 74 |
| BmgT120I | GGNCC | 2 cut(s) | 244, 869 |
| BmiI | GGNNCC | 4 cut(s) | 245, 246, 622, 923 |
| BmrFI | CCNGG | 4 cut(s) | 626, 918, 1015, 1220 |
| BmrI | ACTGGG | 1 cut(s) | 1075 |
| BmsI | GCATC | 2 cut(s) | 1102, 1140 |
| BmuI | ACTGGG | 1 cut(s) | 1075 |
| BpiI | GAAGAC | 1 cut(s) | 1530 |
| BpmI | CTGGAG | 2 cut(s) | 542, 900 |
| Bpu10I | CCTNAGC | 1 cut(s) | 317 |
| BpuEI | CTTGAG | 1 cut(s) | 1195 |
| BpuMI | CCSGG | 1 cut(s) | 1015 |
| Bsa29I | ATCGAT | 2 cut(s) | 294, 1476 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1116 |
| BsaJI | CCNNGG | 5 cut(s) | 624, 837, 917, 1218, 1321 |
| BsaWI | WCCGGW | 4 cut(s) | 406, 434, 455, 1034 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 359, 406, 427, 434, 462, 476, 523 |
| Bse118I | RCCGGY | 4 cut(s) | 101, 406, 427, 455 |
| Bse1I | ACTGG | 1 cut(s) | 1070 |
| Bse3DI | GCAATG | 1 cut(s) | 747 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1116 |
| BseBI | CCWGG | 3 cut(s) | 626, 918, 1220 |
| BseCI | ATCGAT | 2 cut(s) | 294, 1476 |
| BseDI | CCNNGG | 5 cut(s) | 624, 837, 917, 1218, 1321 |
| BseGI | GGATG | 2 cut(s) | 67, 196 |
| BseJI | GATNNNNATC | 1 cut(s) | 1116 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 359, 406, 427, 434, 462, 476, 523 |
| BseMI | GCAATG | 1 cut(s) | 747 |
| BseMII | CTCAG | 2 cut(s) | 268, 497 |
| BseNI | ACTGG | 1 cut(s) | 1070 |
| BseRI | GAGGAG | 2 cut(s) | 523, 1115 |
| BseSI | GKGCMC | 1 cut(s) | 1303 |
| BseX3I | CGGCCG | 1 cut(s) | 425 |
| BseXI | GCAGC | 1 cut(s) | 749 |
| Bsh1236I | CGCG | 2 cut(s) | 233, 355 |
| Bsh1285I | CGRYCG | 2 cut(s) | 407, 428 |
| BshFI | GGCC | 4 cut(s) | 427, 871, 1018, 1075 |
| BshNI | GGYRCC | 1 cut(s) | 921 |
| BshTI | ACCGGT | 2 cut(s) | 406, 455 |
| BshVI | ATCGAT | 2 cut(s) | 294, 1476 |
| BsiEI | CGRYCG | 2 cut(s) | 407, 428 |
| BsiHKAI | GWGCWC | 3 cut(s) | 643, 1303, 1433 |
| BsiHKCI | CYCGRG | 1 cut(s) | 224 |
| BsiSI | CCGG | 8 cut(s) | 102, 400, 407, 428, 435, 456, 1015, 1035 |
| BslFI | GGGAC | 3 cut(s) | 257, 425, 1201 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 359, 406, 427, 434, 462, 476, 523 |
| BsmAI | GTCTC | 2 cut(s) | 552, 873 |
| BsmBI | CGTCTC | 1 cut(s) | 873 |
| BsmFI | GGGAC | 3 cut(s) | 257, 425, 1201 |
| BsnI | GGCC | 4 cut(s) | 427, 871, 1018, 1075 |
| BsoBI | CYCGRG | 1 cut(s) | 224 |
| Bsp1286I | GDGCHC | 3 cut(s) | 643, 1303, 1433 |
| Bsp143I | GATC | 8 cut(s) | 275, 411, 460, 502, 613, 1289, 1334, 1348 |
| BspACI | CCGC | 4 cut(s) | 233, 353, 424, 473 |
| BspANI | GGCC | 4 cut(s) | 427, 871, 1018, 1075 |
| BspCNI | CTCAG | 2 cut(s) | 267, 498 |
| BspDI | ATCGAT | 2 cut(s) | 294, 1476 |
| BspFNI | CGCG | 2 cut(s) | 233, 355 |
| BspLI | GGNNCC | 4 cut(s) | 245, 246, 622, 923 |
| BspMAI | CTGCAG | 1 cut(s) | 1258 |
| BspT107I | GGYRCC | 1 cut(s) | 921 |
| BspTI | CTTAAG | 1 cut(s) | 1438 |
| BsrDI | GCAATG | 1 cut(s) | 747 |
| BsrFI | RCCGGY | 4 cut(s) | 101, 406, 427, 455 |
| BsrI | ACTGG | 1 cut(s) | 1070 |
| BssAI | RCCGGY | 4 cut(s) | 101, 406, 427, 455 |
| BssECI | CCNNGG | 5 cut(s) | 624, 837, 917, 1218, 1321 |
| BssMI | GATC | 8 cut(s) | 275, 411, 460, 502, 613, 1289, 1334, 1348 |
| BssSI | CACGAG | 2 cut(s) | 26, 335 |
| BssT1I | CCWWGG | 2 cut(s) | 837, 1321 |
| Bst2BI | CACGAG | 2 cut(s) | 26, 335 |
| Bst2UI | CCWGG | 3 cut(s) | 626, 918, 1220 |
| Bst4CI | ACNGT | 4 cut(s) | 144, 791, 1205, 1460 |
| BstAFI | CTTAAG | 1 cut(s) | 1438 |
| BstC8I | GCNNGC | 2 cut(s) | 103, 1020 |
| BstDEI | CTNAG | 4 cut(s) | 254, 317, 506, 701 |
| BstEII | GGTNACC | 2 cut(s) | 78, 430 |
| BstF5I | GGATG | 2 cut(s) | 67, 196 |
| BstFNI | CGCG | 2 cut(s) | 233, 355 |
| BstH2I | RGCGCY | 1 cut(s) | 239 |
| BstHHI | GCGC | 1 cut(s) | 238 |
| BstKTI | GATC | 8 cut(s) | 278, 414, 463, 505, 616, 1292, 1337, 1351 |
| BstMAI | GTCTC | 2 cut(s) | 552, 873 |
| BstMBI | GATC | 8 cut(s) | 275, 411, 460, 502, 613, 1289, 1334, 1348 |
| BstMCI | CGRYCG | 2 cut(s) | 407, 428 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 570, 734, 941, 1377 |
| BstNI | CCWGG | 3 cut(s) | 626, 918, 1220 |
| BstNSI | RCATGY | 3 cut(s) | 208, 568, 893 |
| BstPI | GGTNACC | 2 cut(s) | 78, 430 |
| BstSCI | CCNGG | 4 cut(s) | 624, 916, 1013, 1218 |
| BstSFI | CTRYAG | 4 cut(s) | 34, 873, 976, 1254 |
| BstSLI | GKGCMC | 1 cut(s) | 1303 |
| BstUI | CGCG | 2 cut(s) | 233, 355 |
| BstV1I | GCAGC | 1 cut(s) | 749 |
| BstV2I | GAAGAC | 1 cut(s) | 1530 |
| BstX2I | RGATCY | 1 cut(s) | 502 |
| BstYI | RGATCY | 1 cut(s) | 502 |
| BstZI | CGGCCG | 1 cut(s) | 425 |
| Bsu15I | ATCGAT | 2 cut(s) | 294, 1476 |
| BsuRI | GGCC | 4 cut(s) | 427, 871, 1018, 1075 |
| BsuTUI | ATCGAT | 2 cut(s) | 294, 1476 |
| BtrI | CACGTC | 1 cut(s) | 74 |
| BtsCI | GGATG | 2 cut(s) | 67, 196 |
| BtsIMutI | CAGTG | 2 cut(s) | 262, 973 |
| Cac8I | GCNNGC | 2 cut(s) | 103, 1020 |
| CaiI | CAGNNNCTG | 2 cut(s) | 561, 872 |
| CfoI | GCGC | 1 cut(s) | 238 |
| Cfr10I | RCCGGY | 4 cut(s) | 101, 406, 427, 455 |
| Cfr13I | GGNCC | 2 cut(s) | 244, 869 |
| ClaI | ATCGAT | 2 cut(s) | 294, 1476 |
| Csp6I | GTAC | 3 cut(s) | 922, 1499, 1515 |
| CspAI | ACCGGT | 2 cut(s) | 406, 455 |
| CviAII | CATG | 7 cut(s) | 205, 565, 761, 890, 1134, 1400, 1534 |
| CviQI | GTAC | 3 cut(s) | 922, 1499, 1515 |
| DdeI | CTNAG | 4 cut(s) | 254, 317, 506, 701 |
| DpnI | GATC | 8 cut(s) | 277, 413, 462, 504, 615, 1291, 1336, 1350 |
| DpnII | GATC | 8 cut(s) | 275, 411, 460, 502, 613, 1289, 1334, 1348 |
| EaeI | YGGCCR | 1 cut(s) | 425 |
| EagI | CGGCCG | 1 cut(s) | 425 |
| Ecl136II | GAGCTC | 1 cut(s) | 641 |
| EclXI | CGGCCG | 1 cut(s) | 425 |
| Eco130I | CCWWGG | 2 cut(s) | 837, 1321 |
| Eco147I | AGGCCT | 1 cut(s) | 1075 |
| Eco24I | GRGCYC | 1 cut(s) | 643 |
| Eco47I | GGWCC | 1 cut(s) | 244 |
| Eco52I | CGGCCG | 1 cut(s) | 425 |
| Eco53kI | GAGCTC | 1 cut(s) | 641 |
| Eco88I | CYCGRG | 1 cut(s) | 224 |
| Eco91I | GGTNACC | 2 cut(s) | 78, 430 |
| EcoICRI | GAGCTC | 1 cut(s) | 641 |
| EcoO109I | RGGNCCY | 2 cut(s) | 244, 869 |
| EcoO65I | GGTNACC | 2 cut(s) | 78, 430 |
| EcoRI | GAATTC | 1 cut(s) | 671 |
| EcoRII | CCWGG | 3 cut(s) | 624, 916, 1218 |
| EcoT14I | CCWWGG | 2 cut(s) | 837, 1321 |
| EcoT38I | GRGCYC | 1 cut(s) | 643 |
| ErhI | CCWWGG | 2 cut(s) | 837, 1321 |
| Esp3I | CGTCTC | 1 cut(s) | 873 |
| FaeI | CATG | 7 cut(s) | 208, 568, 764, 893, 1137, 1403, 1537 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 590, 622 |
| FaqI | GGGAC | 3 cut(s) | 257, 425, 1201 |
| FatI | CATG | 7 cut(s) | 204, 564, 760, 889, 1133, 1399, 1533 |
| FauI | CCCGC | 1 cut(s) | 360 |
| FbaI | TGATCA | 2 cut(s) | 411, 1348 |
| FblI | GTMKAC | 2 cut(s) | 1309, 1404 |
| Fnu4HI | GCNGC | 3 cut(s) | 234, 425, 738 |
| FokI | GGATG | 2 cut(s) | 74, 203 |
| FriOI | GRGCYC | 1 cut(s) | 643 |
| Fsp4HI | GCNGC | 3 cut(s) | 234, 425, 738 |
| FspBI | CTAG | 6 cut(s) | 530, 1077, 1082, 1322, 1373, 1409 |
| GlaI | GCGC | 1 cut(s) | 237 |
| GluI | GCNGC | 3 cut(s) | 234, 425, 738 |
| GsuI | CTGGAG | 2 cut(s) | 542, 900 |
| HaeII | RGCGCY | 1 cut(s) | 239 |
| HaeIII | GGCC | 4 cut(s) | 427, 871, 1018, 1075 |
| HapII | CCGG | 8 cut(s) | 102, 400, 407, 428, 435, 456, 1015, 1035 |
| HhaI | GCGC | 1 cut(s) | 238 |
| Hin1II | CATG | 7 cut(s) | 208, 568, 764, 893, 1137, 1403, 1537 |
| Hin6I | GCGC | 1 cut(s) | 236 |
| HinP1I | GCGC | 1 cut(s) | 236 |
| HincII | GTYRAC | 2 cut(s) | 772, 1310 |
| HindII | GTYRAC | 2 cut(s) | 772, 1310 |
| HindIII | AAGCTT | 1 cut(s) | 1435 |
| HpaI | GTTAAC | 1 cut(s) | 772 |
| HpaII | CCGG | 8 cut(s) | 102, 400, 407, 428, 435, 456, 1015, 1035 |
| HphI | GGTGA | 8 cut(s) | 72, 323, 421, 424, 445, 470, 779, 1159 |
| Hpy166II | GTNNAC | 7 cut(s) | 136, 595, 721, 772, 1301, 1310, 1405 |
| Hpy188I | TCNGA | 8 cut(s) | 416, 465, 507, 660, 677, 847, 1129, 1428 |
| Hpy188III | TCNNGA | 8 cut(s) | 26, 55, 200, 521, 634, 814, 1229, 1390 |
| Hpy8I | GTNNAC | 7 cut(s) | 136, 595, 721, 772, 1301, 1310, 1405 |
| Hpy99I | CGWCG | 4 cut(s) | 78, 289, 360, 1311 |
| HpyAV | CCTTC | 3 cut(s) | 52, 529, 758 |
| HpyCH4III | ACNGT | 4 cut(s) | 144, 791, 1205, 1460 |
| HpyCH4IV | ACGT | 2 cut(s) | 73, 284 |
| HpyCH4V | TGCA | 6 cut(s) | 564, 587, 760, 944, 1256, 1301 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 570, 734, 941, 1377 |
| HpyF3I | CTNAG | 4 cut(s) | 254, 317, 506, 701 |
| HpySE526I | ACGT | 2 cut(s) | 73, 284 |
| Hsp92II | CATG | 7 cut(s) | 208, 568, 764, 893, 1137, 1403, 1537 |
| HspAI | GCGC | 1 cut(s) | 236 |
| KflI | GGGWCCC | 1 cut(s) | 244 |
| KpnI | GGTACC | 1 cut(s) | 925 |
| KroI | GCCGGC | 1 cut(s) | 101 |
| KroNI | GCCGGC | 1 cut(s) | 103 |
| Ksp22I | TGATCA | 2 cut(s) | 411, 1348 |
| KspAI | GTTAAC | 1 cut(s) | 772 |
| Kzo9I | GATC | 8 cut(s) | 275, 411, 460, 502, 613, 1289, 1334, 1348 |
| LmnI | GCTCC | 1 cut(s) | 734 |
| Lsp1109I | GCAGC | 1 cut(s) | 749 |
| LweI | GCATC | 2 cut(s) | 1102, 1140 |
| MaeI | CTAG | 6 cut(s) | 530, 1077, 1082, 1322, 1373, 1409 |
| MaeII | ACGT | 2 cut(s) | 73, 284 |
| MaeIII | GTNAC | 7 cut(s) | 23, 78, 200, 430, 791, 806, 1136 |
| MalI | GATC | 8 cut(s) | 277, 413, 462, 504, 615, 1291, 1336, 1350 |
| MboI | GATC | 8 cut(s) | 275, 411, 460, 502, 613, 1289, 1334, 1348 |
| MflI | RGATCY | 1 cut(s) | 502 |
| MhlI | GDGCHC | 3 cut(s) | 643, 1303, 1433 |
| MluCI | AATT | 6 cut(s) | 547, 671, 783, 962, 1048, 1509 |
| MlyI | GAGTC | 2 cut(s) | 447, 1291 |
| MmeI | TCCRAC | 3 cut(s) | 457, 686, 1024 |
| MroNI | GCCGGC | 1 cut(s) | 101 |
| MseI | TTAA | 2 cut(s) | 771, 1439 |
| MslI | CAYNNNNRTG | 2 cut(s) | 759, 1145 |
| MspA1I | CMGCKG | 1 cut(s) | 424 |
| MspCI | CTTAAG | 1 cut(s) | 1438 |
| MspI | CCGG | 8 cut(s) | 102, 400, 407, 428, 435, 456, 1015, 1035 |
| MspR9I | CCNGG | 4 cut(s) | 626, 918, 1015, 1220 |
| MvaI | CCWGG | 3 cut(s) | 626, 918, 1220 |
| MvnI | CGCG | 2 cut(s) | 233, 355 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 570, 734, 941, 1377 |
| NaeI | GCCGGC | 1 cut(s) | 103 |
| NciI | CCSGG | 1 cut(s) | 1015 |
| NdeII | GATC | 8 cut(s) | 275, 411, 460, 502, 613, 1289, 1334, 1348 |
| NgoMIV | GCCGGC | 1 cut(s) | 101 |
| NlaIII | CATG | 7 cut(s) | 208, 568, 764, 893, 1137, 1403, 1537 |
| NlaIV | GGNNCC | 4 cut(s) | 245, 246, 622, 923 |
| NmuCI | GTSAC | 5 cut(s) | 23, 78, 200, 430, 791 |
| NspI | RCATGY | 3 cut(s) | 208, 568, 893 |
| OliI | CACNNNNGTG | 1 cut(s) | 1145 |
| PceI | AGGCCT | 1 cut(s) | 1075 |
| PciI | ACATGT | 2 cut(s) | 204, 889 |
| PdiI | GCCGGC | 1 cut(s) | 103 |
| PfeI | GAWTC | 8 cut(s) | 348, 417, 466, 513, 650, 884, 987, 1386 |
| PinAI | ACCGGT | 2 cut(s) | 406, 455 |
| PkrI | GCNGC | 3 cut(s) | 235, 426, 739 |
| PleI | GAGTC | 2 cut(s) | 446, 1290 |
| PpsI | GAGTC | 2 cut(s) | 446, 1290 |
| PpuMI | RGGWCCY | 1 cut(s) | 244 |
| PscI | ACATGT | 2 cut(s) | 204, 889 |
| Psp124BI | GAGCTC | 1 cut(s) | 643 |
| Psp5II | RGGWCCY | 1 cut(s) | 244 |
| Psp6I | CCWGG | 3 cut(s) | 624, 916, 1218 |
| PspEI | GGTNACC | 2 cut(s) | 78, 430 |
| PspGI | CCWGG | 3 cut(s) | 624, 916, 1218 |
| PspN4I | GGNNCC | 4 cut(s) | 245, 246, 622, 923 |
| PspPI | GGNCC | 2 cut(s) | 244, 869 |
| PspPPI | RGGWCCY | 1 cut(s) | 244 |
| PstI | CTGCAG | 1 cut(s) | 1258 |
| PstNI | CAGNNNCTG | 2 cut(s) | 561, 872 |
| PsuI | RGATCY | 1 cut(s) | 502 |
| RsaI | GTAC | 3 cut(s) | 923, 1500, 1516 |
| RsaNI | GTAC | 3 cut(s) | 922, 1499, 1515 |
| RseI | CAYNNNNRTG | 2 cut(s) | 759, 1145 |
| SacI | GAGCTC | 1 cut(s) | 643 |
| SalI | GTCGAC | 1 cut(s) | 1308 |
| SaqAI | TTAA | 2 cut(s) | 771, 1439 |
| SatI | GCNGC | 3 cut(s) | 234, 425, 738 |
| Sau3AI | GATC | 8 cut(s) | 275, 411, 460, 502, 613, 1289, 1334, 1348 |
| Sau96I | GGNCC | 2 cut(s) | 244, 869 |
| SchI | GAGTC | 2 cut(s) | 447, 1291 |
| ScrFI | CCNGG | 4 cut(s) | 626, 918, 1015, 1220 |
| SduI | GDGCHC | 3 cut(s) | 643, 1303, 1433 |
| SfaNI | GCATC | 2 cut(s) | 1102, 1140 |
| SfcI | CTRYAG | 4 cut(s) | 34, 873, 976, 1254 |
| SgrAI | CRCCGGYG | 1 cut(s) | 455 |
| SinI | GGWCC | 1 cut(s) | 244 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 759, 1145 |
| SmlI | CTYRAG | 2 cut(s) | 1174, 1438 |
| SmoI | CTYRAG | 2 cut(s) | 1174, 1438 |
| SpeI | ACTAGT | 1 cut(s) | 529 |
| Sse9I | AATT | 6 cut(s) | 547, 671, 783, 962, 1048, 1509 |
| SseBI | AGGCCT | 1 cut(s) | 1075 |
| SsiI | CCGC | 4 cut(s) | 233, 353, 424, 473 |
| SspMI | CTAG | 6 cut(s) | 530, 1077, 1082, 1322, 1373, 1409 |
| SstI | GAGCTC | 1 cut(s) | 643 |
| StuI | AGGCCT | 1 cut(s) | 1075 |
| StyD4I | CCNGG | 4 cut(s) | 624, 916, 1013, 1218 |
| StyI | CCWWGG | 2 cut(s) | 837, 1321 |
| TaaI | ACNGT | 4 cut(s) | 144, 791, 1205, 1460 |
| TaiI | ACGT | 2 cut(s) | 76, 287 |
| TaqII | GACCGA | 1 cut(s) | 66 |
| TasI | AATT | 6 cut(s) | 547, 671, 783, 962, 1048, 1509 |
| TatI | WGTACW | 1 cut(s) | 1514 |
| TauI | GCSGC | 2 cut(s) | 236, 427 |
| TfiI | GAWTC | 8 cut(s) | 348, 417, 466, 513, 650, 884, 987, 1386 |
| Tru1I | TTAA | 2 cut(s) | 771, 1439 |
| Tru9I | TTAA | 2 cut(s) | 771, 1439 |
| TscAI | CASTG | 2 cut(s) | 262, 973 |
| TseFI | GTSAC | 5 cut(s) | 23, 78, 200, 430, 791 |
| TseI | GCWGC | 1 cut(s) | 737 |
| Tsp45I | GTSAC | 5 cut(s) | 23, 78, 200, 430, 791 |
| TspDTI | ATGAA | 2 cut(s) | 777, 1388 |
| TspGWI | ACGGA | 1 cut(s) | 696 |
| TspRI | CASTG | 2 cut(s) | 262, 973 |
| Vha464I | CTTAAG | 1 cut(s) | 1438 |
| VneI | GTGCAC | 1 cut(s) | 1299 |
| VpaK11BI | GGWCC | 1 cut(s) | 244 |
| XapI | RAATTY | 1 cut(s) | 671 |
| XceI | RCATGY | 3 cut(s) | 208, 568, 893 |
| XmaJI | CCTAGG | 1 cut(s) | 1321 |
| XmiI | GTMKAC | 2 cut(s) | 1309, 1404 |
| XspI | CTAG | 6 cut(s) | 530, 1077, 1082, 1322, 1373, 1409 |