Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0014635

Physical Location & Seq

Genomic Coordinates Reverse (-)

17429468 .. 17432102

Gene Structure 2635 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G174600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGGCAATGCAGCGTTATTTGGCAGTGGCTTCACCACCATCTCCAAGTTCTGGTCATTCTCATCGAACTCATATATTGGGAGGCTTTGTTGTTGGCATTTTGACAGTCTTGGTGGTTGCTTTGTTATTTTACTTGATCAAGACGAAGCTCTTACCAGCTCTCAGGCACAGGCAATTACCACAGAAGCTTGGGCAGAAAGGAAAGTTGAAAGAAGAGAAAATATTGCTCAGGCGGTTCCAATTAGAGGAACTGGTGAAGGCCACCAAGAACTTCAGCAAAGATTGCTTGTTGGGTTGTGGTGCTTTTGGAAGTGTCTACCAGGGGACTTTTGACGATCTGCAGACACTAGCCATTAAGCGAACCCACGCTGATTCGTTTCAGAGTGCAGAAGAATTCAGAAATGAAGTGAGGCTACTTTCTAAGGTCAAGCACAGAAACCTTGTAGGTTTGGTTGGATTTTGTGAAGAACCATCTGGAGCAGGAGGAGGAAAAGTTTTGATCTATGAATATGTACCAAATGGTTCTCTACTTGATTACTTTATGGGAAGAAAATGGAGGAGCTTAACTTGGAGGCAAAGAGTGAACATAGCCATTGGAGCAGCAAAAGGCATTGCTCATTTGCATGAAGGGGTCAGCCCAAGCATAATCCACCGTGACATAAAGCCGAGTAACATCTTGATAGGAGATGGATTTGAAGCCAAGGTTTCAGATTTTGGACTGGTGAGATCAGGGCCTACTGGGGATCAATCACATGTCAGTAGTCAAATCAAAGGAACTCCAGGATACCTTGACCCTGCATATTGTTCAAGTTTCCATCTAACCCCATTCAGTGATGTCTATAGCTTTGGTGTCATACTTCTGCAACTTGTTTCTTCCCGGCCTGCAGTAGATCTAACGGGACATCGCCCTAATCAACATATCATTGACTGGGCAAGGCCTAGCATAGAGCGAGGTCGTGTTGAGGAGATTTTAGATGCTAATCTTTTAACAGAGCCATGCAACACAGAGATGATGCTAAAGATGGGACAACTTGGCCTAAGATGTGTTGTAAAAGTACCCAAAAACCGTCCTACAATGTCCGAAGTGTGTCAAGAACTTGAAGAGGCCCTTTACAATGCAGACAACTTATTCATCAACAAACAGCCTTCAAGGGAGTCTCGAAGATCAACTGGCTCTCGTCAACCAACAGAGCCAGGGCATAAAAGATCGATCGACTATGATCAGTCTCAAAACTCCGTGAGCATAGATGGCATTGGATTTCAGAGGTTTCATGTGGACATAGACAGCCTCTCCTTTCAGAGCACAAGCTTAAGGTGTTTGGAGTTGGACAATAGTAGTATCAGTATCGACATTGATAATTTGGAAGACATACATGAGGAATCTAGTAGAGAAAAAGAATTAAATATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009814 GO:0009817 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0030054 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

470

Amino Acids

52.31

Weight (kDa)

8.32

Isoelectric Point (pI)

58.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014635)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g11130
malus_domestica	MD02G1123900.v1.1 MD15G1237900.v1.1
prunus_persica	Prupe.7G174600_v2.0.a1 Prupe.7G174600_v2.0.a1 Prupe.7G174600_v2.0.a1
pyrus_communis	pycom02g09680
rosa_chinensis	RchiOBHm_Chr2g0098411
rosa_laevigata	RLG00000016797
rosa_multiflora	Rmu_ssc0000196.1_g000021
rosa_roxburghii	Rroxscaffold_2G00143990
rosa_rugosa	Rorug02G0073000
rosa_samantha	Rh2AG120300 Rh2BG123100 Rh2CG124700 Rh2DG124800
rosa_wichuraiana	Rw2G009410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	50
AccI	GTMKAC	1 cut(s)	315
AciI	CCGC	1 cut(s)	232
AclWI	GGATC	1 cut(s)	750
AcsI	RAATTY	1 cut(s)	392
AcuI	CTGAAG	1 cut(s)	256
AfaI	GTAC	2 cut(s)	513, 1056
AfiI	CCNNNNNNNGG	2 cut(s)	50, 244
AflII	CTTAAG	1 cut(s)	1309
AflIII	ACRYGT	1 cut(s)	751
AgsI	TTSAA	5 cut(s)	208, 695, 807, 1100, 1149
AjnI	CCWGG	3 cut(s)	318, 778, 1192
AluBI	AGCT	6 cut(s)	148, 158, 187, 561, 843, 1308
AluI	AGCT	6 cut(s)	148, 158, 187, 561, 843, 1308
Alw21I	GWGCWC	1 cut(s)	1304
Alw26I	GTCTC	2 cut(s)	1161, 1230
AlwI	GGATC	1 cut(s)	750
AoxI	GGCC	6 cut(s)	258, 731, 878, 935, 1033, 1104
ApeKI	GCWGC	2 cut(s)	10, 599
ApoI	RAATTY	1 cut(s)	392
AspS9I	GGNCC	2 cut(s)	731, 1105
AsuC2I	CCSGG	1 cut(s)	877
AsuHPI	GGTGA	3 cut(s)	24, 265, 733
BarI	GAAGNNNNNNTAC	2 cut(s)	396, 428
BbsI	GAAGAC	1 cut(s)	1371
Bbv12I	GWGCWC	1 cut(s)	1304
BbvI	GCAGC	2 cut(s)	22, 611
BccI	CCATC	6 cut(s)	46, 478, 680, 822, 1015, 1241
BciT130I	CCWGG	3 cut(s)	320, 780, 1194
BciVI	GTATCC	1 cut(s)	776
BclI	TGATCA	2 cut(s)	135, 1219
BcnI	CCSGG	1 cut(s)	877
BcoDI	GTCTC	2 cut(s)	1161, 1230
BfaI	CTAG	3 cut(s)	347, 939, 1383
BfmI	CTRYAG	3 cut(s)	338, 838, 882
BfrI	CTTAAG	1 cut(s)	1309
BfuI	GTATCC	1 cut(s)	776
BglII	AGATCT	1 cut(s)	889
BisI	GCNGC	2 cut(s)	11, 600
BlsI	GCNGC	2 cut(s)	12, 601
Bme1390I	CCNGG	4 cut(s)	320, 780, 877, 1194
BmgT120I	GGNCC	2 cut(s)	731, 1105
BmiI	GGNNCC	1 cut(s)	236
BmrFI	CCNGG	4 cut(s)	320, 780, 877, 1194
BmrI	ACTGGG	2 cut(s)	747, 937
BmsI	GCATC	2 cut(s)	964, 1002
BmuI	ACTGGG	2 cut(s)	747, 937
BpiI	GAAGAC	1 cut(s)	1371
BpmI	CTGGAG	2 cut(s)	495, 762
Bpu10I	CCTNAGC	1 cut(s)	227
BpuMI	CCSGG	1 cut(s)	877
Bsa29I	ATCGAT	1 cut(s)	1208
BsaBI	GATNNNNATC	1 cut(s)	978
BsaJI	CCNNGG	3 cut(s)	319, 699, 1193
BsaXI	ACNNNNNCTCC	6 cut(s)	72, 102, 477, 507, 1274, 1304
Bsc4I	CCNNNNNNNGG	2 cut(s)	50, 244
Bse1I	ACTGG	5 cut(s)	255, 723, 742, 932, 1174
Bse3DI	GCAATG	2 cut(s)	12, 609
Bse8I	GATNNNNATC	1 cut(s)	978
BseBI	CCWGG	3 cut(s)	320, 780, 1194
BseCI	ATCGAT	1 cut(s)	1208
BseDI	CCNNGG	3 cut(s)	319, 699, 1193
BseJI	GATNNNNATC	1 cut(s)	978
BseLI	CCNNNNNNNGG	2 cut(s)	50, 244
BseMI	GCAATG	2 cut(s)	12, 609
BseMII	CTCAG	2 cut(s)	175, 241
BseNI	ACTGG	5 cut(s)	255, 723, 742, 932, 1174
BseRI	GAGGAG	3 cut(s)	498, 571, 977
BseXI	GCAGC	2 cut(s)	22, 611
BsgI	GTGCAG	1 cut(s)	405
Bsh1285I	CGRYCG	1 cut(s)	1212
BshFI	GGCC	6 cut(s)	260, 733, 880, 937, 1035, 1106
BshVI	ATCGAT	1 cut(s)	1208
BsiEI	CGRYCG	1 cut(s)	1212
BsiHKAI	GWGCWC	1 cut(s)	1304
BsiSI	CCGG	1 cut(s)	877
BslFI	GGGAC	3 cut(s)	337, 912, 1038
BslI	CCNNNNNNNGG	2 cut(s)	50, 244
BsmAI	GTCTC	2 cut(s)	1161, 1230
BsmFI	GGGAC	3 cut(s)	337, 912, 1038
BsnI	GGCC	6 cut(s)	260, 733, 880, 937, 1035, 1106
Bsp1286I	GDGCHC	1 cut(s)	1304
BspACI	CCGC	1 cut(s)	232
BspANI	GGCC	6 cut(s)	260, 733, 880, 937, 1035, 1106
BspCNI	CTCAG	2 cut(s)	174, 240
BspDI	ATCGAT	1 cut(s)	1208
BspLI	GGNNCC	1 cut(s)	236
BspMAI	CTGCAG	2 cut(s)	342, 886
BspPI	GGATC	1 cut(s)	750
BspTI	CTTAAG	1 cut(s)	1309
BsrDI	GCAATG	2 cut(s)	12, 609
BsrI	ACTGG	5 cut(s)	255, 723, 742, 932, 1174
BssECI	CCNNGG	3 cut(s)	319, 699, 1193
BssT1I	CCWWGG	1 cut(s)	699
Bst2UI	CCWGG	3 cut(s)	320, 780, 1194
Bst4CI	ACNGT	3 cut(s)	106, 653, 1067
Bst6I	CTCTTC	2 cut(s)	207, 1095
BstAFI	CTTAAG	1 cut(s)	1309
BstAPI	GCANNNNNTGC	1 cut(s)	282
BstC8I	GCNNGC	1 cut(s)	882
BstDEI	CTNAG	4 cut(s)	161, 227, 420, 1037
BstMAI	GTCTC	2 cut(s)	1161, 1230
BstMCI	CGRYCG	1 cut(s)	1212
BstMWI	GCNNNNNNNGC	3 cut(s)	282, 596, 1248
BstNI	CCWGG	3 cut(s)	320, 780, 1194
BstNSI	RCATGY	1 cut(s)	755
BstSCI	CCNGG	4 cut(s)	318, 778, 875, 1192
BstSFI	CTRYAG	3 cut(s)	338, 838, 882
BstV1I	GCAGC	2 cut(s)	22, 611
BstV2I	GAAGAC	1 cut(s)	1371
BstX2I	RGATCY	1 cut(s)	889
BstYI	RGATCY	1 cut(s)	889
Bsu15I	ATCGAT	1 cut(s)	1208
BsuI	GTATCC	1 cut(s)	776
BsuRI	GGCC	6 cut(s)	260, 733, 880, 937, 1035, 1106
BsuTUI	ATCGAT	1 cut(s)	1208
BtgZI	GCGATG	1 cut(s)	887
BtsI	GCAGTG	1 cut(s)	30
BtsIMutI	CAGTG	2 cut(s)	30, 835
Cac8I	GCNNGC	1 cut(s)	882
Cfr13I	GGNCC	2 cut(s)	731, 1105
ClaI	ATCGAT	1 cut(s)	1208
Csp6I	GTAC	2 cut(s)	512, 1055
CviAII	CATG	5 cut(s)	623, 752, 996, 1271, 1373
CviQI	GTAC	2 cut(s)	512, 1055
DdeI	CTNAG	4 cut(s)	161, 227, 420, 1037
Eam1104I	CTCTTC	2 cut(s)	207, 1095
EarI	CTCTTC	2 cut(s)	207, 1095
Eco130I	CCWWGG	1 cut(s)	699
Eco147I	AGGCCT	1 cut(s)	937
Eco57I	CTGAAG	1 cut(s)	256
EcoO109I	RGGNCCY	2 cut(s)	731, 1105
EcoRI	GAATTC	1 cut(s)	392
EcoRII	CCWGG	3 cut(s)	318, 778, 1192
EcoT14I	CCWWGG	1 cut(s)	699
ErhI	CCWWGG	1 cut(s)	699
FaeI	CATG	5 cut(s)	626, 755, 999, 1274, 1376
FalI	AAGNNNNNCTT	2 cut(s)	1092, 1124
FaqI	GGGAC	3 cut(s)	337, 912, 1038
FatI	CATG	5 cut(s)	622, 751, 995, 1270, 1372
FbaI	TGATCA	2 cut(s)	135, 1219
FblI	GTMKAC	1 cut(s)	315
Fnu4HI	GCNGC	2 cut(s)	11, 600
Fsp4HI	GCNGC	2 cut(s)	11, 600
FspBI	CTAG	3 cut(s)	347, 939, 1383
GluI	GCNGC	2 cut(s)	11, 600
GsuI	CTGGAG	2 cut(s)	495, 762
HaeIII	GGCC	6 cut(s)	260, 733, 880, 937, 1035, 1106
HapII	CCGG	1 cut(s)	877
Hin1II	CATG	5 cut(s)	626, 755, 999, 1274, 1376
HincII	GTYRAC	1 cut(s)	1181
HindII	GTYRAC	1 cut(s)	1181
HindIII	AAGCTT	2 cut(s)	185, 1306
HinfI	GANTC	3 cut(s)	371, 1154, 1379
HpaII	CCGG	1 cut(s)	877
HphI	GGTGA	3 cut(s)	24, 265, 733
Hpy166II	GTNNAC	4 cut(s)	316, 583, 1181, 1276
Hpy188I	TCNGA	6 cut(s)	381, 398, 709, 1081, 1263, 1299
Hpy188III	TCNNGA	5 cut(s)	139, 474, 676, 1091, 1158
Hpy8I	GTNNAC	4 cut(s)	316, 583, 1181, 1276
HpyAV	CCTTC	3 cut(s)	250, 620, 1155
HpyCH4III	ACNGT	3 cut(s)	106, 653, 1067
HpyCH4V	TGCA	9 cut(s)	10, 340, 386, 622, 797, 862, 884, 999, 1118
HpyF10VI	GCNNNNNNNGC	3 cut(s)	282, 596, 1248
HpyF3I	CTNAG	4 cut(s)	161, 227, 420, 1037
Hsp92II	CATG	5 cut(s)	626, 755, 999, 1274, 1376
Ksp22I	TGATCA	2 cut(s)	135, 1219
LmnI	GCTCC	3 cut(s)	476, 558, 596
Lsp1109I	GCAGC	2 cut(s)	22, 611
LweI	GCATC	2 cut(s)	964, 1002
MaeI	CTAG	3 cut(s)	347, 939, 1383
MaeIII	GTNAC	2 cut(s)	653, 668
MboII	GAAGA	8 cut(s)	224, 401, 476, 558, 864, 1112, 1173, 1376
MflI	RGATCY	1 cut(s)	889
MhlI	GDGCHC	1 cut(s)	1304
MluCI	AATT	5 cut(s)	173, 239, 392, 1357, 1397
MlyI	GAGTC	1 cut(s)	1163
MmeI	TCCRAC	2 cut(s)	433, 1305
MseI	TTAA	5 cut(s)	354, 563, 986, 1310, 1400
MslI	CAYNNNNRTG	2 cut(s)	621, 1007
MspCI	CTTAAG	1 cut(s)	1309
MspI	CCGG	1 cut(s)	877
MspR9I	CCNGG	4 cut(s)	320, 780, 877, 1194
MvaI	CCWGG	3 cut(s)	320, 780, 1194
MwoI	GCNNNNNNNGC	3 cut(s)	282, 596, 1248
NciI	CCSGG	1 cut(s)	877
NlaIII	CATG	5 cut(s)	626, 755, 999, 1274, 1376
NlaIV	GGNNCC	1 cut(s)	236
NmeAIII	GCCGAG	1 cut(s)	690
NmuCI	GTSAC	1 cut(s)	653
NspI	RCATGY	1 cut(s)	755
PceI	AGGCCT	1 cut(s)	937
PciI	ACATGT	1 cut(s)	751
PfeI	GAWTC	2 cut(s)	371, 1379
PflMI	CCANNNNNTGG	1 cut(s)	50
PfoI	TCCNGGA	1 cut(s)	778
PkrI	GCNGC	2 cut(s)	12, 601
Ple19I	CGATCG	1 cut(s)	1212
PleI	GAGTC	1 cut(s)	1162
PpsI	GAGTC	1 cut(s)	1162
PscI	ACATGT	1 cut(s)	751
Psp6I	CCWGG	3 cut(s)	318, 778, 1192
PspGI	CCWGG	3 cut(s)	318, 778, 1192
PspN4I	GGNNCC	1 cut(s)	236
PspPI	GGNCC	2 cut(s)	731, 1105
PstI	CTGCAG	2 cut(s)	342, 886
PsuI	RGATCY	1 cut(s)	889
PvuI	CGATCG	1 cut(s)	1212
RsaI	GTAC	2 cut(s)	513, 1056
RsaNI	GTAC	2 cut(s)	512, 1055
RseI	CAYNNNNRTG	2 cut(s)	621, 1007
SaqAI	TTAA	5 cut(s)	354, 563, 986, 1310, 1400
SatI	GCNGC	2 cut(s)	11, 600
Sau96I	GGNCC	2 cut(s)	731, 1105
SchI	GAGTC	1 cut(s)	1163
ScrFI	CCNGG	4 cut(s)	320, 780, 877, 1194
SduI	GDGCHC	1 cut(s)	1304
SfaNI	GCATC	2 cut(s)	964, 1002
SfcI	CTRYAG	3 cut(s)	338, 838, 882
SmiMI	CAYNNNNRTG	2 cut(s)	621, 1007
SmlI	CTYRAG	1 cut(s)	1309
SmoI	CTYRAG	1 cut(s)	1309
Sse9I	AATT	5 cut(s)	173, 239, 392, 1357, 1397
SseBI	AGGCCT	1 cut(s)	937
SsiI	CCGC	1 cut(s)	232
SspI	AATATT	1 cut(s)	222
SspMI	CTAG	3 cut(s)	347, 939, 1383
StuI	AGGCCT	1 cut(s)	937
StyD4I	CCNGG	4 cut(s)	318, 778, 875, 1192
StyI	CCWWGG	1 cut(s)	699
TaaI	ACNGT	3 cut(s)	106, 653, 1067
TaqI	TCGA	5 cut(s)	64, 1159, 1208, 1212, 1347
TasI	AATT	5 cut(s)	173, 239, 392, 1357, 1397
TfiI	GAWTC	2 cut(s)	371, 1379
Tru1I	TTAA	5 cut(s)	354, 563, 986, 1310, 1400
Tru9I	TTAA	5 cut(s)	354, 563, 986, 1310, 1400
TscAI	CASTG	2 cut(s)	30, 835
TseFI	GTSAC	1 cut(s)	653
TseI	GCWGC	2 cut(s)	10, 599
Tsp45I	GTSAC	1 cut(s)	653
TspDTI	ATGAA	5 cut(s)	417, 519, 639, 1120, 1259
TspGWI	ACGGA	1 cut(s)	1225
TspRI	CASTG	2 cut(s)	30, 835
Van91I	CCANNNNNTGG	1 cut(s)	50
Vha464I	CTTAAG	1 cut(s)	1309
XapI	RAATTY	1 cut(s)	392
XceI	RCATGY	1 cut(s)	755
XmiI	GTMKAC	1 cut(s)	315
XspI	CTAG	3 cut(s)	347, 939, 1383

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.