Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0003025

Physical Location & Seq

Genomic Coordinates Reverse (-)

15301832 .. 15304926

Gene Structure 3095 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1174000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGTCGGATGTAACACAAGAGCCCATGAGCGACCAGCTTTCCGAGCAGACCTCTATCTTCGGCCTCCGTCTCTGGATTGTCGTTGGAGTCTGCGTCGGCGCCGCCTTCGTGCTCCTCCTCGTCCTCATTTCTCTCTGGTTCGCCGCCAAGCGATCCAAGAACAAAACTTTAGCAAAACCCACAACCCCAATCGTCTTCAAAGAGATCCAGGAGATCCGGGTTGACCATGTCCGGACCCAAACCCAAGCTTACTCGTACCCGAAGCCCGACCCAGTTCCCAGAATCGAGAGGCAACACTTGCTGAAGCCGACGGAGGAAGAGAGCCCAATTGGGTACCAGAAAGTGCACATTGAGATTGGGAAGGACCACCGGATTACTTACCCAGTTGGGTCCTCTTCTTCGCATGGAAGCGGGGAGGCGCGTGCGGTTGAGCAGACCGGTATGGTGGGACCCGAAGTTTCTCACTTGGGGTGGGGGCATTGGTACACTCTGAGAGAGCTTGAGGTTGCGACCAAAGGGTTTGTGGATGACAACGTTATTGGGGAAGGAGGGTATGGGATTGTTTACCATGGTGTTTTGGAGGATAAAACCCAGGTTGCTGTCAAGAACTTGCTCAACAACAGGGGGCAAGCTGAGAGGGAGTTCAAGGTTGAAGTGGAGGCAATCGGAAGAGTTCGGCATAAGAATTTAGTGAGATTACTTGGCTTCTGTGCTGAAGGAGCTCATAGGATGCTTGTGTATGAGTACGTCAACAATGGGAACCTAGAACAGTGGCTTCATGGGGATGTAGGGCCTTGCAGTCCGCTTACTTGGGAGATCCGAATGAATATCATACTGGGAACCGCGAAAGGGTTAACATACCTTCATGAAGGACTGGAACCCAAGGTTATTCACCGTGATATAAAATCGAGCAACATTTTACTTGACAAGCATTGGAATGCCAAGGTGTCAGATTTTGGCCTTGCTAAGCTCATTGGTTCTGAGATGAGCTACATCACGACGCGTGTTATGGGAACATTTGGCTATGTTGCTCCCGAGTATGCGAGTACGGGCATGTTGAATGAGAGAAGCGATGTGTATAGTTTTGGGATTCTTATCATGGAGATACTATCGGGAAGGAATCCAGTTGATTATAGCCGGCCTCCAGAAGAGGTGAACTTAGTGGATTGGCTTAAGAAGATGGTTGCTGACAGAAATGCAGAGGCAGTATTGGATCCCATGTTACCTGAGAAGCCTTCTTCCAGGGCATTGAAGCGGGTTCTTCTTGTAGCTTTACGTTGTGTGGATCCAAATTCGCAGAAGCGGCCAAAATTGGGACATATTGTATATATGCTAGAAGCTGAAGAGTCCCCATTCAAAGATGATCGTAGATCCAAAAGGGACGCAGAGCACTTGGATGGTGACAATGTGAAAAATGGGCCGAAAGAGAAGCAGGTAACTGAACCAGGTGATAGCAGTGGGTATGAAAGAGGCATTGCAGGGTTTGGGAATAAAAACAGTGCCAATGTCACCAAAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase

Protein Analysis

507

Amino Acids

56.59

Weight (kDa)

6.78

Isoelectric Point (pI)

40.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	176 - 401	1.9e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	178 - 443	1.6e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02630
fragaria_vesca	FvH4_1g16210 FvH4_1g16210 FvH4_1g16210 FvH4_2g34110
malus_domestica	MD02G1174000.v1.1 MD08G1097900.v1.1 MD15G1080000.v1.1
prunus_persica	Prupe.1G433000_v2.0.a1 Prupe.1G433000_v2.0.a1 Prupe.1G433000_v2.0.a1 Prupe.7G131700_v2.0.a1 Prupe.7G131700_v2.0.a1 Prupe.7G131700_v2.0.a1
pyrus_communis	pycom02g14030 pycom08g07980 pycom15g07450 pycom15g24820
rosa_chinensis	RchiOBHm_Chr2g0105911 RchiOBHm_Chr6g0308231
rosa_laevigata	RLG00000010656 RLG00000017469
rosa_multiflora	Rmu_sc0004367.1_g000010
rosa_roxburghii	Rroxscaffold_2G00137580 Rroxscaffold_7G00160330
rosa_rugosa	Rorug02G0131900 Rorug06G0365000 Rorug06G0365000 Rorug06G0365100 Rorug06G0365200
rosa_samantha	Rh2AG182400 Rh2CG187000 Rh6AG474100 Rh6BG484800 Rh6CG489900 Rh6DG476200
rosa_wichuraiana	Rw2G014310 Rw6G041360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1423
Acc65I	GGTACC	1 cut(s)	333
AccB1I	GGYRCC	2 cut(s)	98, 333
AccII	CGCG	3 cut(s)	421, 845, 1003
AccIII	TCCGGA	1 cut(s)	231
AciI	CCGC	8 cut(s)	102, 144, 411, 425, 803, 843, 1255, 1303
AclI	AACGTT	1 cut(s)	534
AclWI	GGATC	9 cut(s)	147, 199, 208, 811, 1208, 1221, 1280, 1293, 1365
AcoI	YGGCCR	1 cut(s)	1304
AcsI	RAATTY	2 cut(s)	685, 1291
AcuI	CTGAAG	3 cut(s)	323, 735, 1362
AcyI	GRCGYC	1 cut(s)	99
AfaI	GTAC	5 cut(s)	257, 335, 485, 746, 1048
AfiI	CCNNNNNNNGG	2 cut(s)	849, 1313
AflII	CTTAAG	1 cut(s)	1172
AflIII	ACRYGT	1 cut(s)	1001
AgeI	ACCGGT	1 cut(s)	437
AgsI	TTSAA	6 cut(s)	199, 646, 653, 1060, 1252, 1357
AjnI	CCWGG	4 cut(s)	207, 591, 1241, 1444
AluBI	AGCT	9 cut(s)	37, 248, 499, 632, 722, 970, 990, 1271, 1340
AluI	AGCT	9 cut(s)	37, 248, 499, 632, 722, 970, 990, 1271, 1340
Alw21I	GWGCWC	4 cut(s)	114, 348, 724, 1392
Alw26I	GTCTC	1 cut(s)	74
Alw44I	GTGCAC	1 cut(s)	344
AlwI	GGATC	9 cut(s)	147, 199, 208, 811, 1208, 1221, 1280, 1293, 1365
Ama87I	CYCGRG	1 cut(s)	1034
Aor13HI	TCCGGA	1 cut(s)	231
AoxI	GGCC	6 cut(s)	61, 791, 958, 1139, 1304, 1418
ApaLI	GTGCAC	1 cut(s)	344
ApoI	RAATTY	2 cut(s)	685, 1291
AsiGI	ACCGGT	1 cut(s)	437
Asp718I	GGTACC	1 cut(s)	333
AspLEI	GCGC	2 cut(s)	101, 421
AspS9I	GGNCC	6 cut(s)	234, 364, 390, 449, 791, 1418
AsuC2I	CCSGG	1 cut(s)	218
AsuHPI	GGTGA	5 cut(s)	884, 1165, 1412, 1460, 1501
AvaI	CYCGRG	1 cut(s)	1034
AvaII	GGWCC	4 cut(s)	234, 364, 390, 449
BaeGI	GKGCMC	1 cut(s)	348
BamHI	GGATCC	2 cut(s)	1213, 1285
BanI	GGYRCC	2 cut(s)	98, 333
BanII	GRGCYC	3 cut(s)	24, 326, 724
BbsI	GAAGAC	1 cut(s)	187
Bbv12I	GWGCWC	4 cut(s)	114, 348, 724, 1392
BccI	CCATC	2 cut(s)	1174, 1391
BciT130I	CCWGG	4 cut(s)	209, 593, 1243, 1446
BcnI	CCSGG	1 cut(s)	218
BcoDI	GTCTC	1 cut(s)	74
BfaI	CTAG	2 cut(s)	764, 1334
BfoI	RGCGCY	1 cut(s)	102
BfrI	CTTAAG	1 cut(s)	1172
BfuAI	ACCTGC	1 cut(s)	1423
BisI	GCNGC	3 cut(s)	102, 144, 1304
BlpI	GCTNAGC	1 cut(s)	966
BlsI	GCNGC	3 cut(s)	103, 145, 1305
Bme1390I	CCNGG	5 cut(s)	209, 218, 593, 1243, 1446
Bme18I	GGWCC	4 cut(s)	234, 364, 390, 449
BmeT110I	CYCGRG	1 cut(s)	1034
BmgT120I	GGNCC	6 cut(s)	234, 364, 390, 449, 791, 1418
BmrFI	CCNGG	5 cut(s)	209, 218, 593, 1243, 1446
BmrI	ACTGGG	3 cut(s)	266, 377, 845
BmsI	GCATC	1 cut(s)	720
BmuI	ACTGGG	3 cut(s)	266, 377, 845
BpiI	GAAGAC	1 cut(s)	187
BplI	GAGNNNNNCTC	2 cut(s)	35, 67
BpmI	CTGGAG	1 cut(s)	1128
Bpu1102I	GCTNAGC	1 cut(s)	966
BpuEI	CTTGAG	1 cut(s)	521
BpuMI	CCSGG	1 cut(s)	218
BsaBI	GATNNNNATC	1 cut(s)	1094
BsaHI	GRCGYC	1 cut(s)	99
BsaJI	CCNNGG	5 cut(s)	568, 591, 882, 942, 1242
BsaWI	WCCGGW	3 cut(s)	231, 369, 437
BsaXI	ACNNNNNCTCC	2 cut(s)	78, 108
Bsc4I	CCNNNNNNNGG	2 cut(s)	849, 1313
Bse118I	RCCGGY	2 cut(s)	437, 1137
Bse1I	ACTGG	5 cut(s)	272, 383, 840, 879, 1124
Bse3DI	GCAATG	1 cut(s)	1473
Bse8I	GATNNNNATC	1 cut(s)	1094
BseAI	TCCGGA	1 cut(s)	231
BseBI	CCWGG	4 cut(s)	209, 593, 1243, 1446
BseDI	CCNNGG	5 cut(s)	568, 591, 882, 942, 1242
BseGI	GGATG	5 cut(s)	13, 532, 735, 790, 1402
BseJI	GATNNNNATC	1 cut(s)	1094
BseLI	CCNNNNNNNGG	2 cut(s)	849, 1313
BseMI	GCAATG	1 cut(s)	1473
BseMII	CTCAG	4 cut(s)	482, 624, 972, 1218
BseNI	ACTGG	5 cut(s)	272, 383, 840, 879, 1124
BseRI	GAGGAG	2 cut(s)	104, 107
BseSI	GKGCMC	1 cut(s)	348
Bsh1236I	CGCG	3 cut(s)	421, 845, 1003
BshFI	GGCC	6 cut(s)	63, 793, 960, 1141, 1306, 1420
BshNI	GGYRCC	2 cut(s)	98, 333
BshTI	ACCGGT	1 cut(s)	437
BsiHKAI	GWGCWC	4 cut(s)	114, 348, 724, 1392
BsiHKCI	CYCGRG	1 cut(s)	1034
BsiSI	CCGG	5 cut(s)	217, 232, 370, 438, 1138
BslFI	GGGAC	4 cut(s)	462, 1329, 1333, 1394
BslI	CCNNNNNNNGG	2 cut(s)	849, 1313
BsmAI	GTCTC	1 cut(s)	74
BsmBI	CGTCTC	1 cut(s)	74
BsmFI	GGGAC	4 cut(s)	462, 1329, 1333, 1394
BsmI	GAATGC	1 cut(s)	943
BsnI	GGCC	6 cut(s)	63, 793, 960, 1141, 1306, 1420
BsoBI	CYCGRG	1 cut(s)	1034
Bsp1286I	GDGCHC	6 cut(s)	24, 114, 326, 348, 724, 1392
Bsp13I	TCCGGA	1 cut(s)	231
Bsp143I	GATC	8 cut(s)	152, 204, 213, 816, 1213, 1285, 1363, 1370
Bsp1720I	GCTNAGC	1 cut(s)	966
Bsp19I	CCATGG	1 cut(s)	568
BspACI	CCGC	8 cut(s)	102, 144, 411, 425, 803, 843, 1255, 1303
BspANI	GGCC	6 cut(s)	63, 793, 960, 1141, 1306, 1420
BspCNI	CTCAG	4 cut(s)	483, 625, 973, 1219
BspEI	TCCGGA	1 cut(s)	231
BspFNI	CGCG	3 cut(s)	421, 845, 1003
BspHI	TCATGA	1 cut(s)	865
BspMI	ACCTGC	1 cut(s)	1423
BspPI	GGATC	9 cut(s)	147, 199, 208, 811, 1208, 1221, 1280, 1293, 1365
BspT107I	GGYRCC	2 cut(s)	98, 333
BspTI	CTTAAG	1 cut(s)	1172
BsrDI	GCAATG	1 cut(s)	1473
BsrFI	RCCGGY	2 cut(s)	437, 1137
BsrI	ACTGG	5 cut(s)	272, 383, 840, 879, 1124
BssAI	RCCGGY	2 cut(s)	437, 1137
BssECI	CCNNGG	5 cut(s)	568, 591, 882, 942, 1242
BssMI	GATC	8 cut(s)	152, 204, 213, 816, 1213, 1285, 1363, 1370
BssNI	GRCGYC	1 cut(s)	99
BssT1I	CCWWGG	3 cut(s)	568, 882, 942
Bst2UI	CCWGG	4 cut(s)	209, 593, 1243, 1446
Bst4CI	ACNGT	3 cut(s)	771, 896, 1499
Bst6I	CTCTTC	5 cut(s)	312, 400, 664, 1143, 1338
BstACI	GRCGYC	1 cut(s)	99
BstAFI	CTTAAG	1 cut(s)	1172
BstAPI	GCANNNNNTGC	1 cut(s)	298
BstC8I	GCNNGC	3 cut(s)	423, 630, 1139
BstDEI	CTNAG	6 cut(s)	491, 633, 966, 981, 1159, 1227
BstDSI	CCRYGG	1 cut(s)	568
BstF5I	GGATG	5 cut(s)	13, 532, 735, 790, 1402
BstFNI	CGCG	3 cut(s)	421, 845, 1003
BstH2I	RGCGCY	1 cut(s)	102
BstHHI	GCGC	2 cut(s)	101, 421
BstKTI	GATC	8 cut(s)	155, 207, 216, 819, 1216, 1288, 1366, 1373
BstMAI	GTCTC	1 cut(s)	74
BstMBI	GATC	8 cut(s)	152, 204, 213, 816, 1213, 1285, 1363, 1370
BstMWI	GCNNNNNNNGC	4 cut(s)	43, 298, 719, 1303
BstNI	CCWGG	4 cut(s)	209, 593, 1243, 1446
BstNSI	RCATGY	1 cut(s)	1057
BstSCI	CCNGG	5 cut(s)	207, 216, 591, 1241, 1444
BstSLI	GKGCMC	1 cut(s)	348
BstUI	CGCG	3 cut(s)	421, 845, 1003
BstV2I	GAAGAC	1 cut(s)	187
BstX2I	RGATCY	6 cut(s)	204, 213, 816, 1213, 1285, 1370
BstYI	RGATCY	6 cut(s)	204, 213, 816, 1213, 1285, 1370
BsuRI	GGCC	6 cut(s)	63, 793, 960, 1141, 1306, 1420
BtgI	CCRYGG	1 cut(s)	568
BtgZI	GCGATG	1 cut(s)	1086
BtsCI	GGATG	5 cut(s)	13, 532, 735, 790, 1402
BtsI	GCAGTG	1 cut(s)	1462
BtsIMutI	CAGTG	3 cut(s)	776, 1462, 1504
BveI	ACCTGC	1 cut(s)	1423
Cac8I	GCNNGC	3 cut(s)	423, 630, 1139
CciI	TCATGA	1 cut(s)	865
CfoI	GCGC	2 cut(s)	101, 421
Cfr10I	RCCGGY	2 cut(s)	437, 1137
Cfr13I	GGNCC	6 cut(s)	234, 364, 390, 449, 791, 1418
CseI	GACGC	3 cut(s)	82, 1009, 1391
CsiI	ACCWGGT	1 cut(s)	1444
Csp6I	GTAC	5 cut(s)	256, 334, 484, 745, 1047
CspAI	ACCGGT	1 cut(s)	437
CviAII	CATG	9 cut(s)	25, 227, 404, 569, 779, 866, 1054, 1099, 1219
CviQI	GTAC	5 cut(s)	256, 334, 484, 745, 1047
DdeI	CTNAG	6 cut(s)	491, 633, 966, 981, 1159, 1227
DinI	GGCGCC	1 cut(s)	100
DpnI	GATC	8 cut(s)	154, 206, 215, 818, 1215, 1287, 1365, 1372
DpnII	GATC	8 cut(s)	152, 204, 213, 816, 1213, 1285, 1363, 1370
EaeI	YGGCCR	1 cut(s)	1304
Eam1104I	CTCTTC	5 cut(s)	312, 400, 664, 1143, 1338
EarI	CTCTTC	5 cut(s)	312, 400, 664, 1143, 1338
Ecl136II	GAGCTC	1 cut(s)	722
Eco130I	CCWWGG	3 cut(s)	568, 882, 942
Eco24I	GRGCYC	3 cut(s)	24, 326, 724
Eco47I	GGWCC	4 cut(s)	234, 364, 390, 449
Eco53kI	GAGCTC	1 cut(s)	722
Eco57I	CTGAAG	3 cut(s)	323, 735, 1362
Eco88I	CYCGRG	1 cut(s)	1034
EcoICRI	GAGCTC	1 cut(s)	722
EcoO109I	RGGNCCY	3 cut(s)	390, 449, 791
EcoRII	CCWGG	4 cut(s)	207, 591, 1241, 1444
EcoT14I	CCWWGG	3 cut(s)	568, 882, 942
EcoT38I	GRGCYC	3 cut(s)	24, 326, 724
EgeI	GGCGCC	1 cut(s)	100
EheI	GGCGCC	1 cut(s)	100
ErhI	CCWWGG	3 cut(s)	568, 882, 942
Esp3I	CGTCTC	1 cut(s)	74
FaeI	CATG	9 cut(s)	28, 230, 407, 572, 782, 869, 1057, 1102, 1222
FaqI	GGGAC	4 cut(s)	462, 1329, 1333, 1394
FatI	CATG	9 cut(s)	24, 226, 403, 568, 778, 865, 1053, 1098, 1218
FauI	CCCGC	2 cut(s)	404, 1248
Fnu4HI	GCNGC	3 cut(s)	102, 144, 1304
FokI	GGATG	5 cut(s)	20, 539, 742, 797, 1409
FriOI	GRGCYC	3 cut(s)	24, 326, 724
Fsp4HI	GCNGC	3 cut(s)	102, 144, 1304
FspBI	CTAG	2 cut(s)	764, 1334
GlaI	GCGC	2 cut(s)	100, 420
GluI	GCNGC	3 cut(s)	102, 144, 1304
GsuI	CTGGAG	1 cut(s)	1128
HaeII	RGCGCY	1 cut(s)	102
HaeIII	GGCC	6 cut(s)	63, 793, 960, 1141, 1306, 1420
HapII	CCGG	5 cut(s)	217, 232, 370, 438, 1138
HgaI	GACGC	3 cut(s)	82, 1009, 1391
HhaI	GCGC	2 cut(s)	101, 421
Hin1I	GRCGYC	1 cut(s)	99
Hin1II	CATG	9 cut(s)	28, 230, 407, 572, 782, 869, 1057, 1102, 1222
Hin6I	GCGC	2 cut(s)	99, 419
HinP1I	GCGC	2 cut(s)	99, 419
HincII	GTYRAC	3 cut(s)	223, 751, 855
HindII	GTYRAC	3 cut(s)	223, 751, 855
HindIII	AAGCTT	1 cut(s)	246
HinfI	GANTC	5 cut(s)	87, 282, 1090, 1120, 1346
HpaI	GTTAAC	1 cut(s)	855
HpaII	CCGG	5 cut(s)	217, 232, 370, 438, 1138
HphI	GGTGA	5 cut(s)	884, 1165, 1412, 1460, 1501
Hpy166II	GTNNAC	7 cut(s)	223, 346, 486, 565, 751, 855, 1156
Hpy188I	TCNGA	7 cut(s)	7, 43, 492, 668, 821, 952, 982
Hpy188III	TCNNGA	9 cut(s)	73, 232, 286, 604, 866, 997, 1034, 1113, 1145
Hpy8I	GTNNAC	7 cut(s)	223, 346, 486, 565, 751, 855, 1156
Hpy99I	CGWCG	3 cut(s)	98, 313, 1003
HpyAV	CCTTC	8 cut(s)	115, 355, 539, 710, 863, 872, 1110, 1245
HpyCH4III	ACNGT	3 cut(s)	771, 896, 1499
HpyCH4IV	ACGT	3 cut(s)	534, 747, 1276
HpyCH4V	TGCA	4 cut(s)	346, 798, 1199, 1478
HpyF10VI	GCNNNNNNNGC	4 cut(s)	43, 298, 719, 1303
HpyF3I	CTNAG	6 cut(s)	491, 633, 966, 981, 1159, 1227
HpySE526I	ACGT	3 cut(s)	534, 747, 1276
Hsp92I	GRCGYC	1 cut(s)	99
Hsp92II	CATG	9 cut(s)	28, 230, 407, 572, 782, 869, 1057, 1102, 1222
HspAI	GCGC	2 cut(s)	99, 419
KasI	GGCGCC	1 cut(s)	98
KflI	GGGWCCC	1 cut(s)	449
Kpn2I	TCCGGA	1 cut(s)	231
KpnI	GGTACC	1 cut(s)	337
KroI	GCCGGC	1 cut(s)	1137
KroNI	GCCGGC	1 cut(s)	1139
KspAI	GTTAAC	1 cut(s)	855
Kzo9I	GATC	8 cut(s)	152, 204, 213, 816, 1213, 1285, 1363, 1370
LmnI	GCTCC	3 cut(s)	117, 719, 1036
LweI	GCATC	1 cut(s)	720
MabI	ACCWGGT	1 cut(s)	1444
MaeI	CTAG	2 cut(s)	764, 1334
MaeII	ACGT	3 cut(s)	534, 747, 1276
MaeIII	GTNAC	5 cut(s)	10, 1221, 1400, 1435, 1507
MalI	GATC	8 cut(s)	154, 206, 215, 818, 1215, 1287, 1365, 1372
MboI	GATC	8 cut(s)	152, 204, 213, 816, 1213, 1285, 1363, 1370
MfeI	CAATTG	1 cut(s)	327
MflI	RGATCY	6 cut(s)	204, 213, 816, 1213, 1285, 1370
MhlI	GDGCHC	6 cut(s)	24, 114, 326, 348, 724, 1392
MluCI	AATT	4 cut(s)	327, 685, 1291, 1310
MluI	ACGCGT	1 cut(s)	1001
Mly113I	GGCGCC	1 cut(s)	99
MlyI	GAGTC	2 cut(s)	96, 1355
MmeI	TCCRAC	1 cut(s)	64
MroI	TCCGGA	1 cut(s)	231
MroNI	GCCGGC	1 cut(s)	1137
MseI	TTAA	2 cut(s)	854, 1173
MslI	CAYNNNNRTG	3 cut(s)	783, 936, 1395
MspCI	CTTAAG	1 cut(s)	1172
MspI	CCGG	5 cut(s)	217, 232, 370, 438, 1138
MspR9I	CCNGG	5 cut(s)	209, 218, 593, 1243, 1446
MunI	CAATTG	1 cut(s)	327
Mva1269I	GAATGC	1 cut(s)	943
MvaI	CCWGG	4 cut(s)	209, 593, 1243, 1446
MvnI	CGCG	3 cut(s)	421, 845, 1003
MwoI	GCNNNNNNNGC	4 cut(s)	43, 298, 719, 1303
NaeI	GCCGGC	1 cut(s)	1139
NarI	GGCGCC	1 cut(s)	99
NciI	CCSGG	1 cut(s)	218
NcoI	CCATGG	1 cut(s)	568
NdeII	GATC	8 cut(s)	152, 204, 213, 816, 1213, 1285, 1363, 1370
NgoMIV	GCCGGC	1 cut(s)	1137
NlaIII	CATG	9 cut(s)	28, 230, 407, 572, 782, 869, 1057, 1102, 1222
NmuCI	GTSAC	2 cut(s)	1400, 1507
NspI	RCATGY	1 cut(s)	1057
PagI	TCATGA	1 cut(s)	865
PctI	GAATGC	1 cut(s)	943
PdiI	GCCGGC	1 cut(s)	1139
PfeI	GAWTC	3 cut(s)	282, 1090, 1120
PflFI	GACNNNGTC	1 cut(s)	227
PfoI	TCCNGGA	1 cut(s)	207
PinAI	ACCGGT	1 cut(s)	437
PkrI	GCNGC	3 cut(s)	103, 145, 1305
PleI	GAGTC	2 cut(s)	95, 1354
PluTI	GGCGCC	1 cut(s)	102
PpsI	GAGTC	2 cut(s)	95, 1354
PpuMI	RGGWCCY	2 cut(s)	390, 449
Psp124BI	GAGCTC	1 cut(s)	724
Psp1406I	AACGTT	1 cut(s)	534
Psp5II	RGGWCCY	2 cut(s)	390, 449
Psp6I	CCWGG	4 cut(s)	207, 591, 1241, 1444
PspGI	CCWGG	4 cut(s)	207, 591, 1241, 1444
PspPI	GGNCC	6 cut(s)	234, 364, 390, 449, 791, 1418
PspPPI	RGGWCCY	2 cut(s)	390, 449
PsuI	RGATCY	6 cut(s)	204, 213, 816, 1213, 1285, 1370
PsyI	GACNNNGTC	1 cut(s)	227
RsaI	GTAC	5 cut(s)	257, 335, 485, 746, 1048
RsaNI	GTAC	5 cut(s)	256, 334, 484, 745, 1047
RseI	CAYNNNNRTG	3 cut(s)	783, 936, 1395
SacI	GAGCTC	1 cut(s)	724
SaqAI	TTAA	2 cut(s)	854, 1173
SatI	GCNGC	3 cut(s)	102, 144, 1304
Sau3AI	GATC	8 cut(s)	152, 204, 213, 816, 1213, 1285, 1363, 1370
Sau96I	GGNCC	6 cut(s)	234, 364, 390, 449, 791, 1418
SchI	GAGTC	2 cut(s)	96, 1355
ScrFI	CCNGG	5 cut(s)	209, 218, 593, 1243, 1446
SduI	GDGCHC	6 cut(s)	24, 114, 326, 348, 724, 1392
SexAI	ACCWGGT	1 cut(s)	1444
SfaNI	GCATC	1 cut(s)	720
SfoI	GGCGCC	1 cut(s)	100
SinI	GGWCC	4 cut(s)	234, 364, 390, 449
SmiMI	CAYNNNNRTG	3 cut(s)	783, 936, 1395
SmlI	CTYRAG	2 cut(s)	500, 1172
SmoI	CTYRAG	2 cut(s)	500, 1172
Sse9I	AATT	4 cut(s)	327, 685, 1291, 1310
SsiI	CCGC	8 cut(s)	102, 144, 411, 425, 803, 843, 1255, 1303
SspDI	GGCGCC	1 cut(s)	98
SspMI	CTAG	2 cut(s)	764, 1334
SstI	GAGCTC	1 cut(s)	724
StyD4I	CCNGG	5 cut(s)	207, 216, 591, 1241, 1444
StyI	CCWWGG	3 cut(s)	568, 882, 942
TaaI	ACNGT	3 cut(s)	771, 896, 1499
TaiI	ACGT	3 cut(s)	537, 750, 1279
TaqI	TCGA	2 cut(s)	285, 908
TasI	AATT	4 cut(s)	327, 685, 1291, 1310
TauI	GCSGC	3 cut(s)	104, 146, 1306
TfiI	GAWTC	3 cut(s)	282, 1090, 1120
Tru1I	TTAA	2 cut(s)	854, 1173
Tru9I	TTAA	2 cut(s)	854, 1173
TscAI	CASTG	3 cut(s)	776, 1462, 1504
TseFI	GTSAC	2 cut(s)	1400, 1507
Tsp45I	GTSAC	2 cut(s)	1400, 1507
TspDTI	ATGAA	5 cut(s)	767, 839, 854, 882, 1479
TspGWI	ACGGA	2 cut(s)	56, 326
TspRI	CASTG	3 cut(s)	776, 1462, 1504
Tth111I	GACNNNGTC	1 cut(s)	227
Vha464I	CTTAAG	1 cut(s)	1172
VneI	GTGCAC	1 cut(s)	344
VpaK11BI	GGWCC	4 cut(s)	234, 364, 390, 449
XapI	RAATTY	2 cut(s)	685, 1291
XceI	RCATGY	1 cut(s)	1057
XcmI	CCANNNNNNNNNTGG	1 cut(s)	520
XspI	CTAG	2 cut(s)	764, 1334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.