Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0003025

Physical Location & Seq

Genomic Coordinates Reverse (-)

65080139 .. 65083900

Gene Structure 3762 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G041360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGTCTGGGTACTCGTTTTTGAACGACCAGCTGTCCCGGCGCACCTCCATTTTCGGGTTACACCTCTGGGTGGTTCTTGGAATTTGTGTCGGAGCAGCCATAGTTCTGGTTCTGTTCCTCATCTCTCTATGGTTCACTTCACGCCGGAACAGTACTAGTTCGTCAAACTCTAAGGCCACCCAGAACCCGACAATCCCAAATGTCTCCAAGGAGATCCAAGAAATCCGAATCGACTGCTCCCGGGGCACCAACGACCCGCCCGACCCGAAGCCGGCCCAGCAGCACCCCGACCCGGTTGCGGAGTCGGATCCCCTGGCCAGAGCCCAGGCGGTGCTGCTCCAGCCGGACGAGGAGAGCCCAGCCAGCACCGCAAGGCAGAGGATTCACATTGAAATTGGCAAGGACCATCGGATTTCGTACCCGGAAAAAGGAGGTGGCTCGTCGTCGTACGGGAGCGGCGAGACTCGTTCCGGCGACCAGGGGGGGATCACTGGGCCGGAGGTGTCGCATTTGGGGTGGGGGCATTGGTATACACTCAGAGAGCTTGAGGATGCTACTAATGGGTTTGCTGATGAGAATGTGATTGGTGAAGGTGGATATGGGATTGTGTACAGAGGTGTTTTGGAGGACAACTCAATGGTTGCAGTCAAGAATTTGCTCAATAACAAGGGACAAGCCGAGAAGGAGTTCAAGGTTGAAGTTGAAGCAATTGGTCGTGTTCGCCATAAGAATTTAGTGAGGCTGCTTGGCTACTGTGCTGAAGGTGCTCACAGGATGCTTGTGTATGAGTATGTTGACAACGGAAACCTGGAACAATGGCTTCATGGAGATGTCGGGCCTCTCAGCCCTCTGACATGGGAGAATCGCATGAATATAATACTTGGGACAGCGAAAGGGTTGACATACTTGCATGAGGGACTAGAGCCCAAGGTTGTTCACCGTGATATTAAGTCCAGCAACATCTTGCTTGATAAGCAGTGGAATTCTAAAGTATCTGACTTTGGCTTAGCAAAGCTCCTGGGCTCAGAAAGGAGTTATGTGACAACTCGTGTGATGGGAACATTTGGATATGTAGCTCCAGAATATGCTAGTACTGGCATGTTGAATGAAAGAAGTGATGTTTATAGTTTTGGGATTCTCATAATGGAGATTATTTCGGGGAGAAACCCAGTAGACTATAGCAGGCCTGCAGGAGAGGTGAACCTAGTTGAATGGCTTAAAACAATGGTTACCAATCGGACCGCCGAGGGAGTTTTAGATCCTAGATTGCCAGAGAAGCCTTCTTCCAGGGCATTGAAGCGTGCTCTTCTGGTTGCCTTACGTTGTGTGGACCCGAATGCTCAGAAGAGGCCAAAAATGGGGCATGTGGTGCATATGCTTGAAGCTGATGAGTTCCCTTTCCGAGATGACCGCAGGCCTGGAAGAGAATATGGACGCTCACCGCGTGATGCTGCAAAGCGTGTTATGGAATCAGGTGATAGTAGCGGGTATGACAGTGGTGCCCAAACTAACATGTCAGCATGGAGAAAGCAAGAAGTTGAAGAAGAGCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

517

Amino Acids

57.42

Weight (kDa)

6.27

Isoelectric Point (pI)

41.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	190 - 458	2e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	193 - 460	1.7e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02630
fragaria_vesca	FvH4_1g16210 FvH4_1g16210 FvH4_1g16210 FvH4_2g34110
malus_domestica	MD02G1174000.v1.1 MD08G1097900.v1.1 MD15G1080000.v1.1
prunus_persica	Prupe.1G433000_v2.0.a1 Prupe.1G433000_v2.0.a1 Prupe.1G433000_v2.0.a1 Prupe.7G131700_v2.0.a1 Prupe.7G131700_v2.0.a1 Prupe.7G131700_v2.0.a1
pyrus_communis	pycom02g14030 pycom08g07980 pycom15g07450 pycom15g24820
rosa_chinensis	RchiOBHm_Chr2g0105911 RchiOBHm_Chr6g0308231
rosa_laevigata	RLG00000010656 RLG00000017469
rosa_multiflora	Rmu_sc0004367.1_g000010
rosa_roxburghii	Rroxscaffold_2G00137580 Rroxscaffold_7G00160330
rosa_rugosa	Rorug02G0131900 Rorug06G0365000 Rorug06G0365000 Rorug06G0365100 Rorug06G0365200
rosa_samantha	Rh2AG182400 Rh2CG187000 Rh6AG474100 Rh6BG484800 Rh6CG489900 Rh6DG476200
rosa_wichuraiana	Rw2G014310 Rw6G041360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	245, 1499
AccBSI	CCGCTC	1 cut(s)	456
AccI	GTMKAC	2 cut(s)	530, 1173
AccII	CGCG	1 cut(s)	1444
AciI	CCGC	9 cut(s)	257, 299, 329, 369, 456, 1242, 1411, 1442, 1485
AclWI	GGATC	5 cut(s)	208, 302, 315, 494, 1253
AcoI	YGGCCR	1 cut(s)	315
AcsI	RAATTY	4 cut(s)	81, 652, 730, 982
AcuI	CTGAAG	1 cut(s)	780
AdeI	CACNNNGTG	1 cut(s)	1445
AfaI	GTAC	6 cut(s)	11, 154, 419, 449, 611, 1093
AfiI	CCNNNNNNNGG	7 cut(s)	54, 70, 271, 292, 298, 428, 1358
AflIII	ACRYGT	1 cut(s)	1512
AhdI	GACNNNNNGTC	1 cut(s)	31
AhlI	ACTAGT	1 cut(s)	155
AjnI	CCWGG	7 cut(s)	312, 324, 477, 807, 1017, 1286, 1417
AluBI	AGCT	5 cut(s)	31, 544, 1015, 1076, 1385
AluI	AGCT	5 cut(s)	31, 544, 1015, 1076, 1385
Alw21I	GWGCWC	2 cut(s)	769, 1306
Alw26I	GTCTC	2 cut(s)	208, 455
AlwI	GGATC	5 cut(s)	208, 302, 315, 494, 1253
Ama87I	CYCGRG	1 cut(s)	240
AoxI	GGCC	8 cut(s)	174, 273, 315, 494, 836, 1184, 1349, 1415
ApeKI	GCWGC	5 cut(s)	95, 280, 334, 742, 1451
ApoI	RAATTY	4 cut(s)	81, 652, 730, 982
Asp700I	GAANNNNTTC	1 cut(s)	686
AspLEI	GCGC	1 cut(s)	42
AspS9I	GGNCC	6 cut(s)	274, 403, 494, 836, 1239, 1330
AsuC2I	CCSGG	5 cut(s)	37, 241, 242, 293, 422
AsuHPI	GGTGA	5 cut(s)	599, 929, 1210, 1431, 1487
AvaI	CYCGRG	1 cut(s)	240
AvaII	GGWCC	3 cut(s)	403, 1239, 1330
BaeGI	GKGCMC	2 cut(s)	248, 1504
BalI	TGGCCA	1 cut(s)	317
BamHI	GGATCC	1 cut(s)	307
BanI	GGYRCC	2 cut(s)	245, 1499
BanII	GRGCYC	4 cut(s)	325, 359, 927, 1025
BauI	CACGAG	1 cut(s)	1047
Bbv12I	GWGCWC	2 cut(s)	769, 1306
BbvI	GCAGC	5 cut(s)	107, 292, 321, 729, 1438
BccI	CCATC	2 cut(s)	414, 1048
BcgI	CGANNNNNNTGC	4 cut(s)	216, 250, 278, 312
BciT130I	CCWGG	7 cut(s)	314, 326, 479, 809, 1019, 1288, 1419
BcnI	CCSGG	5 cut(s)	37, 241, 242, 293, 422
BcoDI	GTCTC	2 cut(s)	208, 455
BcuI	ACTAGT	1 cut(s)	155
BfaI	CTAG	5 cut(s)	156, 920, 1089, 1205, 1263
BfmI	CTRYAG	2 cut(s)	1177, 1188
BisI	GCNGC	6 cut(s)	96, 281, 335, 457, 743, 1452
BlpI	GCTNAGC	1 cut(s)	1006
BlsI	GCNGC	6 cut(s)	97, 282, 336, 458, 744, 1453
BmcAI	AGTACT	2 cut(s)	154, 1093
Bme18I	GGWCC	3 cut(s)	403, 1239, 1330
BmeRI	GACNNNNNGTC	1 cut(s)	31
BmeT110I	CYCGRG	1 cut(s)	240
BmgT120I	GGNCC	6 cut(s)	274, 403, 494, 836, 1239, 1330
BmiI	GGNNCC	4 cut(s)	247, 309, 1332, 1501
BmrI	ACTGGG	2 cut(s)	501, 1163
BmsI	GCATC	3 cut(s)	541, 765, 1438
BmuI	ACTGGG	2 cut(s)	501, 1163
BplI	GAGNNNNNCTC	2 cut(s)	617, 649
BpmI	CTGGAG	2 cut(s)	323, 1062
Bpu1102I	GCTNAGC	1 cut(s)	1006
BpuEI	CTTGAG	1 cut(s)	566
BpuMI	CCSGG	5 cut(s)	37, 241, 242, 293, 422
Bsc4I	CCNNNNNNNGG	7 cut(s)	54, 70, 271, 292, 298, 428, 1358
Bse118I	RCCGGY	1 cut(s)	271
Bse1I	ACTGG	3 cut(s)	496, 1099, 1169
BseBI	CCWGG	7 cut(s)	314, 326, 479, 809, 1019, 1288, 1419
BseGI	GGATG	2 cut(s)	556, 780
BseLI	CCNNNNNNNGG	7 cut(s)	54, 70, 271, 292, 298, 428, 1358
BseMII	CTCAG	4 cut(s)	550, 856, 1038, 1355
BseNI	ACTGG	3 cut(s)	496, 1099, 1169
BseRI	GAGGAG	1 cut(s)	365
BseSI	GKGCMC	2 cut(s)	248, 1504
BseXI	GCAGC	5 cut(s)	107, 292, 321, 729, 1438
BseYI	CCCAGC	2 cut(s)	276, 358
Bsh1236I	CGCG	1 cut(s)	1444
BshFI	GGCC	8 cut(s)	176, 275, 317, 496, 838, 1186, 1351, 1417
BshNI	GGYRCC	2 cut(s)	245, 1499
BsiHKAI	GWGCWC	2 cut(s)	769, 1306
BsiHKCI	CYCGRG	1 cut(s)	240
BsiSI	CCGG	9 cut(s)	37, 145, 241, 272, 293, 344, 422, 471, 497
BsiWI	CGTACG	1 cut(s)	447
BslFI	GGGAC	4 cut(s)	19, 684, 898, 930
BslI	CCNNNNNNNGG	7 cut(s)	54, 70, 271, 292, 298, 428, 1358
BsmAI	GTCTC	2 cut(s)	208, 455
BsmFI	GGGAC	4 cut(s)	19, 684, 898, 930
BsmI	GAATGC	1 cut(s)	1342
BsnI	GGCC	8 cut(s)	176, 275, 317, 496, 838, 1186, 1351, 1417
BsoBI	CYCGRG	1 cut(s)	240
Bsp1286I	GDGCHC	8 cut(s)	248, 325, 359, 769, 927, 1025, 1306, 1504
Bsp1407I	TGTACA	1 cut(s)	609
Bsp143I	GATC	4 cut(s)	213, 307, 486, 1258
Bsp1720I	GCTNAGC	1 cut(s)	1006
BspACI	CCGC	9 cut(s)	257, 299, 329, 369, 456, 1242, 1411, 1442, 1485
BspANI	GGCC	8 cut(s)	176, 275, 317, 496, 838, 1186, 1351, 1417
BspCNI	CTCAG	4 cut(s)	549, 855, 1037, 1354
BspFNI	CGCG	1 cut(s)	1444
BspLI	GGNNCC	4 cut(s)	247, 309, 1332, 1501
BspMAI	CTGCAG	1 cut(s)	1192
BspPI	GGATC	5 cut(s)	208, 302, 315, 494, 1253
BspQI	GCTCTTC	2 cut(s)	1311, 1539
BspT107I	GGYRCC	2 cut(s)	245, 1499
BsrBI	CCGCTC	1 cut(s)	456
BsrFI	RCCGGY	1 cut(s)	271
BsrGI	TGTACA	1 cut(s)	609
BsrI	ACTGG	3 cut(s)	496, 1099, 1169
BssAI	RCCGGY	1 cut(s)	271
BssMI	GATC	4 cut(s)	213, 307, 486, 1258
BssNAI	GTATAC	1 cut(s)	531
BssSI	CACGAG	1 cut(s)	1047
BssT1I	CCWWGG	2 cut(s)	207, 927
Bst1107I	GTATAC	1 cut(s)	531
Bst2BI	CACGAG	1 cut(s)	1047
Bst2UI	CCWGG	7 cut(s)	314, 326, 479, 809, 1019, 1288, 1419
Bst4CI	ACNGT	4 cut(s)	152, 755, 941, 1496
Bst6I	CTCTTC	4 cut(s)	1311, 1340, 1417, 1539
BstAPI	GCANNNNNTGC	1 cut(s)	1369
BstAUI	TGTACA	1 cut(s)	609
BstC8I	GCNNGC	6 cut(s)	273, 364, 1184, 1188, 1302, 1415
BstDEI	CTNAG	6 cut(s)	171, 536, 842, 1006, 1024, 1341
BstEII	GGTNACC	1 cut(s)	1228
BstF5I	GGATG	2 cut(s)	556, 780
BstFNI	CGCG	1 cut(s)	1444
BstHHI	GCGC	1 cut(s)	42
BstKTI	GATC	4 cut(s)	216, 310, 489, 1261
BstMAI	GTCTC	2 cut(s)	208, 455
BstMBI	GATC	4 cut(s)	213, 307, 486, 1258
BstNI	CCWGG	7 cut(s)	314, 326, 479, 809, 1019, 1288, 1419
BstNSI	RCATGY	3 cut(s)	1102, 1367, 1516
BstPI	GGTNACC	1 cut(s)	1228
BstSFI	CTRYAG	2 cut(s)	1177, 1188
BstSLI	GKGCMC	2 cut(s)	248, 1504
BstUI	CGCG	1 cut(s)	1444
BstV1I	GCAGC	5 cut(s)	107, 292, 321, 729, 1438
BstX2I	RGATCY	3 cut(s)	213, 307, 1258
BstXI	CCANNNNNNTGG	1 cut(s)	106
BstYI	RGATCY	3 cut(s)	213, 307, 1258
BstZ17I	GTATAC	1 cut(s)	531
BsuRI	GGCC	8 cut(s)	176, 275, 317, 496, 838, 1186, 1351, 1417
BtsCI	GGATG	2 cut(s)	556, 780
BtsI	GCAGTG	1 cut(s)	983
BtsIMutI	CAGTG	3 cut(s)	489, 983, 1501
Cac8I	GCNNGC	6 cut(s)	273, 364, 1184, 1188, 1302, 1415
CfoI	GCGC	1 cut(s)	42
Cfr10I	RCCGGY	1 cut(s)	271
Cfr13I	GGNCC	6 cut(s)	274, 403, 494, 836, 1239, 1330
Cfr9I	CCCGGG	1 cut(s)	240
CpoI	CGGWCCG	1 cut(s)	1239
CseI	GACGC	1 cut(s)	1443
Csp6I	GTAC	6 cut(s)	10, 153, 418, 448, 610, 1092
CspI	CGGWCCG	1 cut(s)	1239
CviAII	CATG	8 cut(s)	824, 855, 868, 911, 1099, 1364, 1513, 1521
CviQI	GTAC	6 cut(s)	10, 153, 418, 448, 610, 1092
DdeI	CTNAG	6 cut(s)	171, 536, 842, 1006, 1024, 1341
DpnI	GATC	4 cut(s)	215, 309, 488, 1260
DpnII	GATC	4 cut(s)	213, 307, 486, 1258
DraIII	CACNNNGTG	1 cut(s)	1445
DriI	GACNNNNNGTC	1 cut(s)	31
EaeI	YGGCCR	1 cut(s)	315
Eam1104I	CTCTTC	4 cut(s)	1311, 1340, 1417, 1539
Eam1105I	GACNNNNNGTC	1 cut(s)	31
EarI	CTCTTC	4 cut(s)	1311, 1340, 1417, 1539
Eco130I	CCWWGG	2 cut(s)	207, 927
Eco147I	AGGCCT	2 cut(s)	1186, 1417
Eco24I	GRGCYC	4 cut(s)	325, 359, 927, 1025
Eco47I	GGWCC	3 cut(s)	403, 1239, 1330
Eco57I	CTGAAG	1 cut(s)	780
Eco88I	CYCGRG	1 cut(s)	240
Eco91I	GGTNACC	1 cut(s)	1228
EcoO65I	GGTNACC	1 cut(s)	1228
EcoRI	GAATTC	1 cut(s)	982
EcoRII	CCWGG	7 cut(s)	312, 324, 477, 807, 1017, 1286, 1417
EcoT14I	CCWWGG	2 cut(s)	207, 927
EcoT38I	GRGCYC	4 cut(s)	325, 359, 927, 1025
ErhI	CCWWGG	2 cut(s)	207, 927
FaeI	CATG	8 cut(s)	827, 858, 871, 914, 1102, 1367, 1516, 1524
FaqI	GGGAC	4 cut(s)	19, 684, 898, 930
FatI	CATG	8 cut(s)	823, 854, 867, 910, 1098, 1363, 1512, 1520
FauI	CCCGC	2 cut(s)	264, 1478
FauNDI	CATATG	1 cut(s)	1374
FblI	GTMKAC	2 cut(s)	530, 1173
Fnu4HI	GCNGC	6 cut(s)	96, 281, 335, 457, 743, 1452
FokI	GGATG	2 cut(s)	563, 787
FriOI	GRGCYC	4 cut(s)	325, 359, 927, 1025
Fsp4HI	GCNGC	6 cut(s)	96, 281, 335, 457, 743, 1452
FspBI	CTAG	5 cut(s)	156, 920, 1089, 1205, 1263
GlaI	GCGC	1 cut(s)	41
GluI	GCNGC	6 cut(s)	96, 281, 335, 457, 743, 1452
GsaI	CCCAGC	2 cut(s)	280, 362
GsuI	CTGGAG	2 cut(s)	323, 1062
HaeIII	GGCC	8 cut(s)	176, 275, 317, 496, 838, 1186, 1351, 1417
HapII	CCGG	9 cut(s)	37, 145, 241, 272, 293, 344, 422, 471, 497
HgaI	GACGC	1 cut(s)	1443
HhaI	GCGC	1 cut(s)	42
Hin1II	CATG	8 cut(s)	827, 858, 871, 914, 1102, 1367, 1516, 1524
Hin6I	GCGC	1 cut(s)	40
HinP1I	GCGC	1 cut(s)	40
HincII	GTYRAC	2 cut(s)	796, 900
HindII	GTYRAC	2 cut(s)	796, 900
HinfI	GANTC	7 cut(s)	228, 302, 382, 463, 862, 1135, 1469
HpaII	CCGG	9 cut(s)	37, 145, 241, 272, 293, 344, 422, 471, 497
HphI	GGTGA	5 cut(s)	599, 929, 1210, 1431, 1487
Hpy166II	GTNNAC	9 cut(s)	135, 531, 610, 796, 900, 937, 1174, 1201, 1330
Hpy188III	TCNNGA	2 cut(s)	649, 1079
Hpy8I	GTNNAC	9 cut(s)	135, 531, 610, 796, 900, 937, 1174, 1201, 1330
Hpy99I	CGWCG	2 cut(s)	445, 448
HpyAV	CCTTC	4 cut(s)	584, 676, 755, 1290
HpyCH4III	ACNGT	4 cut(s)	152, 755, 941, 1496
HpyCH4IV	ACGT	1 cut(s)	1321
HpyCH4V	TGCA	5 cut(s)	644, 910, 1190, 1372, 1454
HpyF3I	CTNAG	6 cut(s)	171, 536, 842, 1006, 1024, 1341
HpySE526I	ACGT	1 cut(s)	1321
Hsp92II	CATG	8 cut(s)	827, 858, 871, 914, 1102, 1367, 1516, 1524
HspAI	GCGC	1 cut(s)	40
KroI	GCCGGC	1 cut(s)	271
KroNI	GCCGGC	1 cut(s)	273
Kzo9I	GATC	4 cut(s)	213, 307, 486, 1258
LguI	GCTCTTC	2 cut(s)	1311, 1539
LmnI	GCTCC	6 cut(s)	92, 242, 342, 453, 1020, 1081
Lsp1109I	GCAGC	5 cut(s)	107, 292, 321, 729, 1438
LweI	GCATC	3 cut(s)	541, 765, 1438
MaeI	CTAG	5 cut(s)	156, 920, 1089, 1205, 1263
MaeII	ACGT	1 cut(s)	1321
MaeIII	GTNAC	3 cut(s)	57, 1039, 1228
MalI	GATC	4 cut(s)	215, 309, 488, 1260
MbiI	CCGCTC	1 cut(s)	456
MboI	GATC	4 cut(s)	213, 307, 486, 1258
MboII	GAAGA	5 cut(s)	1275, 1298, 1357, 1434, 1553
MfeI	CAATTG	1 cut(s)	708
MflI	RGATCY	3 cut(s)	213, 307, 1258
MhlI	GDGCHC	8 cut(s)	248, 325, 359, 769, 927, 1025, 1306, 1504
MlsI	TGGCCA	1 cut(s)	317
MluCI	AATT	6 cut(s)	81, 393, 652, 708, 730, 982
MluNI	TGGCCA	1 cut(s)	317
MlyI	GAGTC	2 cut(s)	311, 457
MmeI	TCCRAC	2 cut(s)	70, 285
Mox20I	TGGCCA	1 cut(s)	317
MroNI	GCCGGC	1 cut(s)	271
MroXI	GAANNNNTTC	1 cut(s)	686
MscI	TGGCCA	1 cut(s)	317
MseI	TTAA	2 cut(s)	948, 1218
MslI	CAYNNNNRTG	1 cut(s)	828
Msp20I	TGGCCA	1 cut(s)	317
MspA1I	CMGCKG	1 cut(s)	31
MspI	CCGG	9 cut(s)	37, 145, 241, 272, 293, 344, 422, 471, 497
MunI	CAATTG	1 cut(s)	708
Mva1269I	GAATGC	1 cut(s)	1342
MvaI	CCWGG	7 cut(s)	314, 326, 479, 809, 1019, 1288, 1419
MvnI	CGCG	1 cut(s)	1444
NaeI	GCCGGC	1 cut(s)	273
NciI	CCSGG	5 cut(s)	37, 241, 242, 293, 422
NdeI	CATATG	1 cut(s)	1374
NdeII	GATC	4 cut(s)	213, 307, 486, 1258
NgoMIV	GCCGGC	1 cut(s)	271
NlaIII	CATG	8 cut(s)	827, 858, 871, 914, 1102, 1367, 1516, 1524
NlaIV	GGNNCC	4 cut(s)	247, 309, 1332, 1501
NmeAIII	GCCGAG	2 cut(s)	703, 1270
NmuCI	GTSAC	1 cut(s)	1039
NspI	RCATGY	3 cut(s)	1102, 1367, 1516
PceI	AGGCCT	2 cut(s)	1186, 1417
PciI	ACATGT	1 cut(s)	1512
PciSI	GCTCTTC	2 cut(s)	1311, 1539
PcsI	WCGNNNNNNNCGW	3 cut(s)	258, 456, 1441
PctI	GAATGC	1 cut(s)	1342
PdiI	GCCGGC	1 cut(s)	273
PdmI	GAANNNNTTC	1 cut(s)	686
PfeI	GAWTC	5 cut(s)	228, 382, 862, 1135, 1469
Pfl23II	CGTACG	1 cut(s)	447
PkrI	GCNGC	6 cut(s)	97, 282, 336, 458, 744, 1453
PleI	GAGTC	2 cut(s)	310, 457
PpsI	GAGTC	2 cut(s)	310, 457
PscI	ACATGT	1 cut(s)	1512
Psp6I	CCWGG	7 cut(s)	312, 324, 477, 807, 1017, 1286, 1417
PspEI	GGTNACC	1 cut(s)	1228
PspFI	CCCAGC	2 cut(s)	276, 358
PspGI	CCWGG	7 cut(s)	312, 324, 477, 807, 1017, 1286, 1417
PspLI	CGTACG	1 cut(s)	447
PspN4I	GGNNCC	4 cut(s)	247, 309, 1332, 1501
PspPI	GGNCC	6 cut(s)	274, 403, 494, 836, 1239, 1330
PstI	CTGCAG	1 cut(s)	1192
PsuI	RGATCY	3 cut(s)	213, 307, 1258
PvuII	CAGCTG	1 cut(s)	31
RsaI	GTAC	6 cut(s)	11, 154, 419, 449, 611, 1093
RsaNI	GTAC	6 cut(s)	10, 153, 418, 448, 610, 1092
RseI	CAYNNNNRTG	1 cut(s)	828
Rsr2I	CGGWCCG	1 cut(s)	1239
RsrII	CGGWCCG	1 cut(s)	1239
SapI	GCTCTTC	2 cut(s)	1311, 1539
SaqAI	TTAA	2 cut(s)	948, 1218
SatI	GCNGC	6 cut(s)	96, 281, 335, 457, 743, 1452
Sau3AI	GATC	4 cut(s)	213, 307, 486, 1258
Sau96I	GGNCC	6 cut(s)	274, 403, 494, 836, 1239, 1330
SbfI	CCTGCAGG	1 cut(s)	1192
ScaI	AGTACT	2 cut(s)	154, 1093
SchI	GAGTC	2 cut(s)	311, 457
SdaI	CCTGCAGG	1 cut(s)	1192
SduI	GDGCHC	8 cut(s)	248, 325, 359, 769, 927, 1025, 1306, 1504
SfaNI	GCATC	3 cut(s)	541, 765, 1438
SfcI	CTRYAG	2 cut(s)	1177, 1188
SinI	GGWCC	3 cut(s)	403, 1239, 1330
SmaI	CCCGGG	1 cut(s)	242
SmiMI	CAYNNNNRTG	1 cut(s)	828
SmlI	CTYRAG	1 cut(s)	545
SmoI	CTYRAG	1 cut(s)	545
SpeI	ACTAGT	1 cut(s)	155
Sse8387I	CCTGCAGG	1 cut(s)	1192
Sse9I	AATT	6 cut(s)	81, 393, 652, 708, 730, 982
SseBI	AGGCCT	2 cut(s)	1186, 1417
SsiI	CCGC	9 cut(s)	257, 299, 329, 369, 456, 1242, 1411, 1442, 1485
SspMI	CTAG	5 cut(s)	156, 920, 1089, 1205, 1263
StuI	AGGCCT	2 cut(s)	1186, 1417
StyI	CCWWGG	2 cut(s)	207, 927
TaaI	ACNGT	4 cut(s)	152, 755, 941, 1496
TaiI	ACGT	1 cut(s)	1324
TaqI	TCGA	1 cut(s)	231
TasI	AATT	6 cut(s)	81, 393, 652, 708, 730, 982
TatI	WGTACW	3 cut(s)	152, 609, 1091
TauI	GCSGC	1 cut(s)	459
TfiI	GAWTC	5 cut(s)	228, 382, 862, 1135, 1469
Tru1I	TTAA	2 cut(s)	948, 1218
Tru9I	TTAA	2 cut(s)	948, 1218
TscAI	CASTG	3 cut(s)	496, 983, 1501
TseFI	GTSAC	1 cut(s)	1039
TseI	GCWGC	5 cut(s)	95, 280, 334, 742, 1451
Tsp45I	GTSAC	1 cut(s)	1039
TspDTI	ATGAA	3 cut(s)	812, 884, 1122
TspGWI	ACGGA	1 cut(s)	816
TspMI	CCCGGG	1 cut(s)	240
TspRI	CASTG	3 cut(s)	496, 983, 1501
VpaK11BI	GGWCC	3 cut(s)	403, 1239, 1330
XapI	RAATTY	4 cut(s)	81, 652, 730, 982
XceI	RCATGY	3 cut(s)	1102, 1367, 1516
XmaI	CCCGGG	1 cut(s)	240
XmiI	GTMKAC	2 cut(s)	530, 1173
XmnI	GAANNNNTTC	1 cut(s)	686
XspI	CTAG	5 cut(s)	156, 920, 1089, 1205, 1263
ZrmI	AGTACT	2 cut(s)	154, 1093

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.