Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0003025

Physical Location & Seq

Genomic Coordinates Forward (+)

5444362 .. 5447781

Gene Structure 3420 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1080000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGTCGGGCTACTCGTTTCTGAACGACCAGCTCTCGAAGAGGACCTCCATTTTCGGTTTGCATTTGTGGGTAGTTTTGGGAATTTGCGTCGGAGCCGCCATTGTTCTCGTCCTCTTCCTCATCTCTCTCTGGTTCACTTCCCGCCGCAACAGCGCCTCCTCAAAAGCCAAGACCTTTACCCACAACTTCTCCACCATCCCAAACGTCTCCAAAGAGATCCAAGAAATCAGAATTGACCAGGCCCGGAACCACCCATCGCAACCCGACCCGAAACCCACCAACCACCAGAGTCACCCCGACCCGGTTGCCGACTCTGACTCCTCCGGCGCCAGACCCCAACCCCTGCTTCTTCAGCAGGACGATCACCACGAAAGCCCGGCTGGGAGCGGCGGCCGGCAGAGAATTCACATTGAGATTGGGAAGGACCACCGGATTTCGTACCCGGAGAAGGAAGGCGGCGGCGGGTCGTCTCATGGCAGCGGCGAGGTTCGGTCTGGGGACCAGGGAATGATCGCCGCGCCGGAGGTTTCACATTTGGGGTGGGGCCATTGGTACACTCTCAGAGAGCTTGAGGATTCCACTAATGGGTTTGCCGACGAGAATGTGATTGGTGAAGGCGGCTATGGAATTGTTTACCGCGGTGTTTTGGAGGATAATACGATTGTTGCTGTAAAAAATCTGCTTAATAACAAGGGACAAGCCGAGAAGGAGTTTAAGGTCGAAGTTGAAGCGATTGGCCGTGTTCGCCATAAGAATTTAGTGAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCATAGAATGCTTGTGTATGAGTATGTTGACAATGGAAATTTGGAACAATGGCTTCATGGTGATGTTGGGCCTACAAGTCCTCTTGTGTGGGAGAGTCGTATGAATATAATACTCGGGACAGCGAAAGGGTTGACTTACTTGCATGAGGGGCTTGAGCCAAAGGTCGTTCACCGTGATATTAAGTCTAGCAACATCTTACTTGATAAGCAGTGGAATTCAAAAGTATCCGACTTTGGCTTAGCAAAGCTACTTGGCTCAGAAAGGAGTTACGTGACAACTCGAGTGATGGGAACATTCGGATATGTAGCTCCAGAATATGCCAGTACTGGTATGTTGAATGAAAGAAGTGATGTGTATAGTTTCGGAATTCTCATAATGGAGATAATTTCTGGGAGAAACCCAGTGGACTATAGCCGCGCTCCAGGAGAGGTGAATCTAGTTGAGTGGCTTAAAGCAATGGTTACAAATCGGAACGCTGAGGGAGTTTTGGATCCTAGGTTACCAGAGAAGCCTTCTTCCAGAGCACTGAAGCGTGCTCTTTTGGTTGCATTGCGTTGCGTGGACCCAAATGCTCAGAAGAGGCCTAAAATGGGGCATGTGGTACATATGCTTGAGGCTGATGAGTTCCCTTTCCGAGATGAGCGCAGGGCTGGAAGAGAACATGGACGTTCACCACGTGATGCTGGAAGGATGGACAAGCGTGTGATTGAATCAGGTGATAGTAGCGGGTATGAGAGTAGTGCCCAAACTAACATGTTGTTATGGAGAAAGCAAGAAGTTGAAGAAGAGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

529

Amino Acids

58.8

Weight (kDa)

6.51

Isoelectric Point (pI)

44.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	198 - 466	3.8e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	201 - 468	6.5e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02630
fragaria_vesca	FvH4_1g16210 FvH4_1g16210 FvH4_1g16210 FvH4_2g34110
malus_domestica	MD02G1174000.v1.1 MD08G1097900.v1.1 MD15G1080000.v1.1
prunus_persica	Prupe.1G433000_v2.0.a1 Prupe.1G433000_v2.0.a1 Prupe.1G433000_v2.0.a1 Prupe.7G131700_v2.0.a1 Prupe.7G131700_v2.0.a1 Prupe.7G131700_v2.0.a1
pyrus_communis	pycom02g14030 pycom08g07980 pycom15g07450 pycom15g24820
rosa_chinensis	RchiOBHm_Chr2g0105911 RchiOBHm_Chr6g0308231
rosa_laevigata	RLG00000010656 RLG00000017469
rosa_multiflora	Rmu_sc0004367.1_g000010
rosa_roxburghii	Rroxscaffold_2G00137580 Rroxscaffold_7G00160330
rosa_rugosa	Rorug02G0131900 Rorug06G0365000 Rorug06G0365000 Rorug06G0365100 Rorug06G0365200
rosa_samantha	Rh2AG182400 Rh2CG187000 Rh6AG474100 Rh6BG484800 Rh6CG489900 Rh6DG476200
rosa_wichuraiana	Rw2G014310 Rw6G041360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	326
AccBSI	CCGCTC	1 cut(s)	387
AccII	CGCG	3 cut(s)	518, 639, 1209
AclWI	GGATC	3 cut(s)	211, 1277, 1290
AcoI	YGGCCR	2 cut(s)	391, 736
AcsI	RAATTY	6 cut(s)	81, 402, 754, 829, 1006, 1158
AcuI	CTGAAG	3 cut(s)	335, 804, 1340
AcvI	CACGTG	1 cut(s)	1469
AcyI	GRCGYC	1 cut(s)	327
AdeI	CACNNNGTG	1 cut(s)	1469
AfaI	GTAC	4 cut(s)	440, 554, 1117, 1395
AfiI	CCNNNNNNNGG	4 cut(s)	301, 448, 585, 1382
AflIII	ACRYGT	1 cut(s)	1545
AgsI	TTSAA	5 cut(s)	728, 1011, 1129, 1502, 1574
AjnI	CCWGG	3 cut(s)	237, 501, 1213
AjuI	GAANNNNNNNTTGG	2 cut(s)	330, 362
AluBI	AGCT	5 cut(s)	31, 568, 791, 1039, 1100
AluI	AGCT	5 cut(s)	31, 568, 791, 1039, 1100
Alw21I	GWGCWC	3 cut(s)	793, 1318, 1330
Alw26I	GTCTC	2 cut(s)	211, 474
AlwI	GGATC	3 cut(s)	211, 1277, 1290
Ama87I	CYCGRG	2 cut(s)	905, 1071
AoxI	GGCC	6 cut(s)	240, 391, 544, 736, 860, 1373
ApeKI	GCWGC	1 cut(s)	477
ApoI	RAATTY	6 cut(s)	81, 402, 754, 829, 1006, 1158
AspA2I	CCTAGG	1 cut(s)	1286
AspLEI	GCGC	5 cut(s)	155, 329, 520, 1211, 1437
AspS9I	GGNCC	7 cut(s)	42, 241, 424, 499, 544, 860, 1354
AsuC2I	CCSGG	4 cut(s)	244, 302, 377, 443
AsuHPI	GGTGA	8 cut(s)	284, 356, 623, 863, 953, 1234, 1455, 1520
AvaI	CYCGRG	2 cut(s)	905, 1071
AvaII	GGWCC	4 cut(s)	42, 424, 499, 1354
AvrII	CCTAGG	1 cut(s)	1286
BaeGI	GKGCMC	1 cut(s)	1537
BamHI	GGATCC	1 cut(s)	1282
BanI	GGYRCC	1 cut(s)	326
BanII	GRGCYC	1 cut(s)	793
BbrPI	CACGTG	1 cut(s)	1469
Bbv12I	GWGCWC	3 cut(s)	793, 1318, 1330
BbvCI	CCTCAGC	1 cut(s)	1269
BbvI	GCAGC	1 cut(s)	489
BccI	CCATC	4 cut(s)	203, 262, 1072, 1477
BceAI	ACGGC	1 cut(s)	723
BcgI	CGANNNNNNTGC	2 cut(s)	287, 321
BciT130I	CCWGG	3 cut(s)	239, 503, 1215
BciVI	GTATCC	1 cut(s)	1027
BcnI	CCSGG	4 cut(s)	244, 302, 377, 443
BcoDI	GTCTC	2 cut(s)	211, 474
BfaI	CTAG	3 cut(s)	978, 1229, 1287
BfmI	CTRYAG	1 cut(s)	1201
BfoI	RGCGCY	2 cut(s)	156, 330
BfuI	GTATCC	1 cut(s)	1027
BlnI	CCTAGG	1 cut(s)	1286
BlpI	GCTNAGC	1 cut(s)	1030
BmcAI	AGTACT	1 cut(s)	1117
Bme1390I	CCNGG	7 cut(s)	239, 244, 302, 377, 443, 503, 1215
Bme18I	GGWCC	4 cut(s)	42, 424, 499, 1354
BmeT110I	CYCGRG	2 cut(s)	905, 1071
BmgT120I	GGNCC	7 cut(s)	42, 241, 424, 499, 544, 860, 1354
BmiI	GGNNCC	7 cut(s)	94, 248, 328, 500, 545, 1284, 1356
BmrFI	CCNGG	7 cut(s)	239, 244, 302, 377, 443, 503, 1215
BmrI	ACTGGG	1 cut(s)	1187
BmsI	GCATC	1 cut(s)	1462
BmuI	ACTGGG	1 cut(s)	1187
BpmI	CTGGAG	2 cut(s)	1086, 1197
Bpu10I	CCTNAGC	1 cut(s)	1269
Bpu1102I	GCTNAGC	1 cut(s)	1030
BpuEI	CTTGAG	3 cut(s)	590, 965, 1424
BpuMI	CCSGG	4 cut(s)	244, 302, 377, 443
BsaAI	YACGTR	2 cut(s)	1063, 1469
BsaHI	GRCGYC	1 cut(s)	327
BsaJI	CCNNGG	3 cut(s)	502, 637, 1286
BsaWI	WCCGGW	1 cut(s)	429
BsaXI	ACNNNNNCTCC	6 cut(s)	140, 170, 173, 203, 302, 332
Bsc4I	CCNNNNNNNGG	4 cut(s)	301, 448, 585, 1382
Bse118I	RCCGGY	1 cut(s)	393
Bse1I	ACTGG	3 cut(s)	1113, 1123, 1193
Bse3DI	GCAATG	2 cut(s)	1254, 1340
BseBI	CCWGG	3 cut(s)	239, 503, 1215
BseDI	CCNNGG	3 cut(s)	502, 637, 1286
BseGI	GGATG	2 cut(s)	195, 1488
BseLI	CCNNNNNNNGG	4 cut(s)	301, 448, 585, 1382
BseMI	GCAATG	2 cut(s)	1254, 1340
BseMII	CTCAG	4 cut(s)	574, 1062, 1260, 1379
BseNI	ACTGG	3 cut(s)	1113, 1123, 1193
BseRI	GAGGAG	2 cut(s)	148, 310
BseSI	GKGCMC	1 cut(s)	1537
BseX3I	CGGCCG	1 cut(s)	391
BseXI	GCAGC	1 cut(s)	489
BseYI	CCCAGC	1 cut(s)	380
Bsh1236I	CGCG	3 cut(s)	518, 639, 1209
Bsh1285I	CGRYCG	1 cut(s)	394
BshFI	GGCC	6 cut(s)	242, 393, 546, 738, 862, 1375
BshNI	GGYRCC	1 cut(s)	326
BsiEI	CGRYCG	1 cut(s)	394
BsiHKAI	GWGCWC	3 cut(s)	793, 1318, 1330
BsiHKCI	CYCGRG	2 cut(s)	905, 1071
BsiSI	CCGG	8 cut(s)	244, 302, 324, 377, 394, 430, 443, 521
BslFI	GGGAC	3 cut(s)	512, 708, 922
BslI	CCNNNNNNNGG	4 cut(s)	301, 448, 585, 1382
BsmAI	GTCTC	2 cut(s)	211, 474
BsmBI	CGTCTC	2 cut(s)	211, 474
BsmFI	GGGAC	3 cut(s)	512, 708, 922
BsmI	GAATGC	1 cut(s)	804
BsnI	GGCC	6 cut(s)	242, 393, 546, 738, 862, 1375
BsoBI	CYCGRG	2 cut(s)	905, 1071
Bsp1286I	GDGCHC	4 cut(s)	793, 1318, 1330, 1537
Bsp143I	GATC	4 cut(s)	216, 361, 510, 1282
Bsp1720I	GCTNAGC	1 cut(s)	1030
BspANI	GGCC	6 cut(s)	242, 393, 546, 738, 862, 1375
BspCNI	CTCAG	4 cut(s)	573, 1061, 1261, 1378
BspFNI	CGCG	3 cut(s)	518, 639, 1209
BspLI	GGNNCC	7 cut(s)	94, 248, 328, 500, 545, 1284, 1356
BspPI	GGATC	3 cut(s)	211, 1277, 1290
BspQI	GCTCTTC	1 cut(s)	1572
BspT107I	GGYRCC	1 cut(s)	326
BsrBI	CCGCTC	1 cut(s)	387
BsrDI	GCAATG	2 cut(s)	1254, 1340
BsrFI	RCCGGY	1 cut(s)	393
BsrI	ACTGG	3 cut(s)	1113, 1123, 1193
BssAI	RCCGGY	1 cut(s)	393
BssECI	CCNNGG	3 cut(s)	502, 637, 1286
BssMI	GATC	4 cut(s)	216, 361, 510, 1282
BssNI	GRCGYC	1 cut(s)	327
BssT1I	CCWWGG	1 cut(s)	1286
Bst2UI	CCWGG	3 cut(s)	239, 503, 1215
Bst4CI	ACNGT	1 cut(s)	965
Bst6I	CTCTTC	5 cut(s)	32, 119, 1364, 1441, 1572
BstACI	GRCGYC	1 cut(s)	327
BstBAI	YACGTR	2 cut(s)	1063, 1469
BstC8I	GCNNGC	2 cut(s)	395, 1326
BstDEI	CTNAG	5 cut(s)	560, 1030, 1048, 1269, 1365
BstDSI	CCRYGG	1 cut(s)	637
BstEII	GGTNACC	1 cut(s)	1290
BstF5I	GGATG	2 cut(s)	195, 1488
BstFNI	CGCG	3 cut(s)	518, 639, 1209
BstH2I	RGCGCY	2 cut(s)	156, 330
BstHHI	GCGC	5 cut(s)	155, 329, 520, 1211, 1437
BstKTI	GATC	4 cut(s)	219, 364, 513, 1285
BstMAI	GTCTC	2 cut(s)	211, 474
BstMBI	GATC	4 cut(s)	216, 361, 510, 1282
BstMCI	CGRYCG	1 cut(s)	394
BstMWI	GCNNNNNNNGC	5 cut(s)	150, 352, 744, 788, 940
BstNI	CCWGG	3 cut(s)	239, 503, 1215
BstNSI	RCATGY	2 cut(s)	1391, 1549
BstPI	GGTNACC	1 cut(s)	1290
BstSCI	CCNGG	7 cut(s)	237, 242, 300, 375, 441, 501, 1213
BstSFI	CTRYAG	1 cut(s)	1201
BstSLI	GKGCMC	1 cut(s)	1537
BstUI	CGCG	3 cut(s)	518, 639, 1209
BstV1I	GCAGC	1 cut(s)	489
BstX2I	RGATCY	2 cut(s)	216, 1282
BstYI	RGATCY	2 cut(s)	216, 1282
BstZI	CGGCCG	1 cut(s)	391
BsuI	GTATCC	1 cut(s)	1027
BsuRI	GGCC	6 cut(s)	242, 393, 546, 738, 862, 1375
BtgI	CCRYGG	1 cut(s)	637
BtgZI	GCGATG	1 cut(s)	240
BtsCI	GGATG	2 cut(s)	195, 1488
BtsI	GCAGTG	1 cut(s)	1007
BtsIMutI	CAGTG	3 cut(s)	1007, 1200, 1316
Cac8I	GCNNGC	2 cut(s)	395, 1326
CfoI	GCGC	5 cut(s)	155, 329, 520, 1211, 1437
Cfr10I	RCCGGY	1 cut(s)	393
Cfr13I	GGNCC	7 cut(s)	42, 241, 424, 499, 544, 860, 1354
Cfr42I	CCGCGG	1 cut(s)	640
CseI	GACGC	1 cut(s)	76
Csp6I	GTAC	4 cut(s)	439, 553, 1116, 1394
CviAII	CATG	6 cut(s)	473, 848, 935, 1388, 1454, 1546
CviQI	GTAC	4 cut(s)	439, 553, 1116, 1394
DdeI	CTNAG	5 cut(s)	560, 1030, 1048, 1269, 1365
DinI	GGCGCC	1 cut(s)	328
DpnI	GATC	4 cut(s)	218, 363, 512, 1284
DpnII	GATC	4 cut(s)	216, 361, 510, 1282
DraIII	CACNNNGTG	1 cut(s)	1469
EaeI	YGGCCR	2 cut(s)	391, 736
EagI	CGGCCG	1 cut(s)	391
Eam1104I	CTCTTC	5 cut(s)	32, 119, 1364, 1441, 1572
EarI	CTCTTC	5 cut(s)	32, 119, 1364, 1441, 1572
Ecl136II	GAGCTC	1 cut(s)	791
EclXI	CGGCCG	1 cut(s)	391
Eco130I	CCWWGG	1 cut(s)	1286
Eco147I	AGGCCT	1 cut(s)	1375
Eco24I	GRGCYC	1 cut(s)	793
Eco47I	GGWCC	4 cut(s)	42, 424, 499, 1354
Eco52I	CGGCCG	1 cut(s)	391
Eco53kI	GAGCTC	1 cut(s)	791
Eco57I	CTGAAG	3 cut(s)	335, 804, 1340
Eco72I	CACGTG	1 cut(s)	1469
Eco88I	CYCGRG	2 cut(s)	905, 1071
Eco91I	GGTNACC	1 cut(s)	1290
EcoICRI	GAGCTC	1 cut(s)	791
EcoO109I	RGGNCCY	1 cut(s)	42
EcoO65I	GGTNACC	1 cut(s)	1290
EcoRI	GAATTC	3 cut(s)	402, 1006, 1158
EcoRII	CCWGG	3 cut(s)	237, 501, 1213
EcoT14I	CCWWGG	1 cut(s)	1286
EcoT38I	GRGCYC	1 cut(s)	793
EgeI	GGCGCC	1 cut(s)	328
EheI	GGCGCC	1 cut(s)	328
ErhI	CCWWGG	1 cut(s)	1286
Esp3I	CGTCTC	2 cut(s)	211, 474
FaeI	CATG	6 cut(s)	476, 851, 938, 1391, 1457, 1549
FaqI	GGGAC	3 cut(s)	512, 708, 922
FatI	CATG	6 cut(s)	472, 847, 934, 1387, 1453, 1545
FauI	CCCGC	3 cut(s)	149, 455, 1511
FauNDI	CATATG	1 cut(s)	1398
FokI	GGATG	2 cut(s)	182, 1495
FriOI	GRGCYC	1 cut(s)	793
FspBI	CTAG	3 cut(s)	978, 1229, 1287
GlaI	GCGC	5 cut(s)	154, 328, 519, 1210, 1436
GsaI	CCCAGC	1 cut(s)	384
GsuI	CTGGAG	2 cut(s)	1086, 1197
HaeII	RGCGCY	2 cut(s)	156, 330
HaeIII	GGCC	6 cut(s)	242, 393, 546, 738, 862, 1375
HapII	CCGG	8 cut(s)	244, 302, 324, 377, 394, 430, 443, 521
HgaI	GACGC	1 cut(s)	76
HhaI	GCGC	5 cut(s)	155, 329, 520, 1211, 1437
Hin1I	GRCGYC	1 cut(s)	327
Hin1II	CATG	6 cut(s)	476, 851, 938, 1391, 1457, 1549
Hin6I	GCGC	5 cut(s)	153, 327, 518, 1209, 1435
HinP1I	GCGC	5 cut(s)	153, 327, 518, 1209, 1435
HincII	GTYRAC	2 cut(s)	820, 924
HindII	GTYRAC	2 cut(s)	820, 924
HinfI	GANTC	7 cut(s)	289, 311, 317, 575, 886, 1225, 1502
HpaII	CCGG	8 cut(s)	244, 302, 324, 377, 394, 430, 443, 521
HphI	GGTGA	8 cut(s)	284, 356, 623, 863, 953, 1234, 1455, 1520
Hpy166II	GTNNAC	9 cut(s)	135, 555, 634, 820, 924, 961, 1198, 1354, 1463
Hpy188III	TCNNGA	4 cut(s)	34, 907, 1103, 1311
Hpy8I	GTNNAC	9 cut(s)	135, 555, 634, 820, 924, 961, 1198, 1354, 1463
Hpy99I	CGWCG	2 cut(s)	92, 599
HpyAV	CCTTC	8 cut(s)	415, 442, 446, 608, 700, 779, 1314, 1473
HpyCH4III	ACNGT	1 cut(s)	965
HpyCH4IV	ACGT	4 cut(s)	204, 1062, 1459, 1468
HpyCH4V	TGCA	3 cut(s)	61, 934, 1340
HpyF10VI	GCNNNNNNNGC	5 cut(s)	150, 352, 744, 788, 940
HpyF3I	CTNAG	5 cut(s)	560, 1030, 1048, 1269, 1365
HpySE526I	ACGT	4 cut(s)	204, 1062, 1459, 1468
Hsp92I	GRCGYC	1 cut(s)	327
Hsp92II	CATG	6 cut(s)	476, 851, 938, 1391, 1457, 1549
HspAI	GCGC	5 cut(s)	153, 327, 518, 1209, 1435
KasI	GGCGCC	1 cut(s)	326
KroI	GCCGGC	1 cut(s)	393
KroNI	GCCGGC	1 cut(s)	395
KspI	CCGCGG	1 cut(s)	640
Kzo9I	GATC	4 cut(s)	216, 361, 510, 1282
LguI	GCTCTTC	1 cut(s)	1572
LmnI	GCTCC	5 cut(s)	92, 384, 788, 1105, 1216
Lsp1109I	GCAGC	1 cut(s)	489
LweI	GCATC	1 cut(s)	1462
MaeI	CTAG	3 cut(s)	978, 1229, 1287
MaeII	ACGT	4 cut(s)	204, 1062, 1459, 1468
MaeIII	GTNAC	5 cut(s)	290, 1058, 1063, 1252, 1290
MalI	GATC	4 cut(s)	218, 363, 512, 1284
MbiI	CCGCTC	1 cut(s)	387
MboI	GATC	4 cut(s)	216, 361, 510, 1282
MboII	GAAGA	7 cut(s)	49, 106, 341, 1299, 1381, 1458, 1586
MflI	RGATCY	2 cut(s)	216, 1282
MhlI	GDGCHC	4 cut(s)	793, 1318, 1330, 1537
MluCI	AATT	9 cut(s)	81, 231, 402, 627, 754, 829, 1006, 1158, 1176
Mly113I	GGCGCC	1 cut(s)	327
MlyI	GAGTC	4 cut(s)	298, 305, 311, 895
MmeI	TCCRAC	2 cut(s)	70, 1044
MroNI	GCCGGC	1 cut(s)	393
MseI	TTAA	4 cut(s)	684, 714, 972, 1242
MslI	CAYNNNNRTG	1 cut(s)	852
MspA1I	CMGCKG	2 cut(s)	480, 639
MspI	CCGG	8 cut(s)	244, 302, 324, 377, 394, 430, 443, 521
MspR9I	CCNGG	7 cut(s)	239, 244, 302, 377, 443, 503, 1215
Mva1269I	GAATGC	1 cut(s)	804
MvaI	CCWGG	3 cut(s)	239, 503, 1215
MvnI	CGCG	3 cut(s)	518, 639, 1209
MwoI	GCNNNNNNNGC	5 cut(s)	150, 352, 744, 788, 940
NaeI	GCCGGC	1 cut(s)	395
NarI	GGCGCC	1 cut(s)	327
NciI	CCSGG	4 cut(s)	244, 302, 377, 443
NdeI	CATATG	1 cut(s)	1398
NdeII	GATC	4 cut(s)	216, 361, 510, 1282
NgoMIV	GCCGGC	1 cut(s)	393
NlaIII	CATG	6 cut(s)	476, 851, 938, 1391, 1457, 1549
NlaIV	GGNNCC	7 cut(s)	94, 248, 328, 500, 545, 1284, 1356
NmeAIII	GCCGAG	1 cut(s)	727
NmuCI	GTSAC	2 cut(s)	290, 1063
NspI	RCATGY	2 cut(s)	1391, 1549
PaeR7I	CTCGAG	1 cut(s)	1071
PceI	AGGCCT	1 cut(s)	1375
PciI	ACATGT	1 cut(s)	1545
PciSI	GCTCTTC	1 cut(s)	1572
PcsI	WCGNNNNNNNCGW	3 cut(s)	11, 366, 1465
PctI	GAATGC	1 cut(s)	804
PdiI	GCCGGC	1 cut(s)	395
PfeI	GAWTC	3 cut(s)	575, 1225, 1502
PfoI	TCCNGGA	1 cut(s)	1213
PleI	GAGTC	4 cut(s)	297, 305, 311, 894
PluTI	GGCGCC	1 cut(s)	330
PmaCI	CACGTG	1 cut(s)	1469
PmlI	CACGTG	1 cut(s)	1469
PpsI	GAGTC	4 cut(s)	297, 305, 311, 894
Ppu21I	YACGTR	2 cut(s)	1063, 1469
PpuMI	RGGWCCY	1 cut(s)	42
PscI	ACATGT	1 cut(s)	1545
Psp124BI	GAGCTC	1 cut(s)	793
Psp5II	RGGWCCY	1 cut(s)	42
Psp6I	CCWGG	3 cut(s)	237, 501, 1213
PspCI	CACGTG	1 cut(s)	1469
PspEI	GGTNACC	1 cut(s)	1290
PspFI	CCCAGC	1 cut(s)	380
PspGI	CCWGG	3 cut(s)	237, 501, 1213
PspN4I	GGNNCC	7 cut(s)	94, 248, 328, 500, 545, 1284, 1356
PspPI	GGNCC	7 cut(s)	42, 241, 424, 499, 544, 860, 1354
PspPPI	RGGWCCY	1 cut(s)	42
PspXI	VCTCGAGB	1 cut(s)	1071
PsuI	RGATCY	2 cut(s)	216, 1282
RsaI	GTAC	4 cut(s)	440, 554, 1117, 1395
RsaNI	GTAC	4 cut(s)	439, 553, 1116, 1394
RseI	CAYNNNNRTG	1 cut(s)	852
SacI	GAGCTC	1 cut(s)	793
SacII	CCGCGG	1 cut(s)	640
SapI	GCTCTTC	1 cut(s)	1572
SaqAI	TTAA	4 cut(s)	684, 714, 972, 1242
Sau3AI	GATC	4 cut(s)	216, 361, 510, 1282
Sau96I	GGNCC	7 cut(s)	42, 241, 424, 499, 544, 860, 1354
ScaI	AGTACT	1 cut(s)	1117
SchI	GAGTC	4 cut(s)	298, 305, 311, 895
ScrFI	CCNGG	7 cut(s)	239, 244, 302, 377, 443, 503, 1215
SduI	GDGCHC	4 cut(s)	793, 1318, 1330, 1537
SfaNI	GCATC	1 cut(s)	1462
SfcI	CTRYAG	1 cut(s)	1201
SfoI	GGCGCC	1 cut(s)	328
Sfr274I	CTCGAG	1 cut(s)	1071
Sfr303I	CCGCGG	1 cut(s)	640
SgrBI	CCGCGG	1 cut(s)	640
SinI	GGWCC	4 cut(s)	42, 424, 499, 1354
SlaI	CTCGAG	1 cut(s)	1071
SmiMI	CAYNNNNRTG	1 cut(s)	852
SmlI	CTYRAG	4 cut(s)	569, 944, 1071, 1403
SmoI	CTYRAG	4 cut(s)	569, 944, 1071, 1403
Sse9I	AATT	9 cut(s)	81, 231, 402, 627, 754, 829, 1006, 1158, 1176
SseBI	AGGCCT	1 cut(s)	1375
SspDI	GGCGCC	1 cut(s)	326
SspMI	CTAG	3 cut(s)	978, 1229, 1287
SstI	GAGCTC	1 cut(s)	793
StuI	AGGCCT	1 cut(s)	1375
StyD4I	CCNGG	7 cut(s)	237, 242, 300, 375, 441, 501, 1213
StyI	CCWWGG	1 cut(s)	1286
TaaI	ACNGT	1 cut(s)	965
TaiI	ACGT	4 cut(s)	207, 1065, 1462, 1471
TaqI	TCGA	3 cut(s)	35, 720, 1072
TaqII	GACCGA	1 cut(s)	480
TasI	AATT	9 cut(s)	81, 231, 402, 627, 754, 829, 1006, 1158, 1176
TatI	WGTACW	1 cut(s)	1115
TfiI	GAWTC	3 cut(s)	575, 1225, 1502
Tru1I	TTAA	4 cut(s)	684, 714, 972, 1242
Tru9I	TTAA	4 cut(s)	684, 714, 972, 1242
TscAI	CASTG	3 cut(s)	1007, 1200, 1323
TseFI	GTSAC	2 cut(s)	290, 1063
TseI	GCWGC	1 cut(s)	477
Tsp45I	GTSAC	2 cut(s)	290, 1063
TspDTI	ATGAA	3 cut(s)	836, 908, 1146
TspRI	CASTG	3 cut(s)	1007, 1200, 1323
VpaK11BI	GGWCC	4 cut(s)	42, 424, 499, 1354
XapI	RAATTY	6 cut(s)	81, 402, 754, 829, 1006, 1158
XceI	RCATGY	2 cut(s)	1391, 1549
XhoI	CTCGAG	1 cut(s)	1071
XmaJI	CCTAGG	1 cut(s)	1286
XspI	CTAG	3 cut(s)	978, 1229, 1287
ZrmI	AGTACT	1 cut(s)	1117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.