Rorug02G0131900

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
11398794 .. 11399433
640 bp
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UTR
Exon/CDS
Intron
Rorug02G0131900.1

Sequence Viewer

Length: 354 bp
ATGGGAGTGAGGGCTTCAGCAATGGCGAATGTAATACAGATATGGGTGATTGACAAGGGAGGACCAGTGTATGTTTCACTGTATCTGCCTTTACAGACGGCAGTTGTCGCTGCATCTGAGCTGATTGTAATATCTGTTTGGTTAATTGATATATACCAGCATTATTGGAGCAATGTTGACCATAGCAGGGCTGTACCTGGTGGTCTGGGGAAAAAGGCAGGAGAGCAAAATCAAGGTGGAAACTTCCTCAATGCCAGGGAACATTTATATTCTGGGGGAGAAGAACGTACCTACCCTCTCTTGTTCAAGCATTGCTCCCTACCTCTGCTTACTAGTTCATGTCATGCTCCCTAA

Protein Analysis

117

Amino Acids

12.79

Weight (kDa)

6.95

Isoelectric Point (pI)

34.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 2 cut(s) 195, 289
AfiI CCNNNNNNNGG 1 cut(s) 187
AgsI TTSAA 1 cut(s) 307
AhlI ACTAGT 1 cut(s) 332
AjnI CCWGG 2 cut(s) 196, 254
AluBI AGCT 1 cut(s) 121
AluI AGCT 1 cut(s) 121
ApeKI GCWGC 1 cut(s) 110
AspS9I GGNCC 1 cut(s) 62
AsuHPI GGTGA 1 cut(s) 58
AvaII GGWCC 1 cut(s) 62
BbvI GCAGC 1 cut(s) 97
BceAI ACGGC 1 cut(s) 114
BciT130I CCWGG 2 cut(s) 198, 256
BcuI ACTAGT 1 cut(s) 332
BfaI CTAG 1 cut(s) 333
BisI GCNGC 1 cut(s) 111
BlsI GCNGC 1 cut(s) 112
Bme1390I CCNGG 2 cut(s) 198, 256
Bme18I GGWCC 1 cut(s) 62
BmgT120I GGNCC 1 cut(s) 62
BmrFI CCNGG 2 cut(s) 198, 256
BmsI GCATC 1 cut(s) 122
BsaJI CCNNGG 1 cut(s) 255
BsaXI ACNNNNNCTCC 2 cut(s) 51, 81
Bsc4I CCNNNNNNNGG 1 cut(s) 187
Bse1I ACTGG 1 cut(s) 65
Bse3DI GCAATG 3 cut(s) 27, 178, 310
BseBI CCWGG 2 cut(s) 198, 256
BseDI CCNNGG 1 cut(s) 255
BseLI CCNNNNNNNGG 1 cut(s) 187
BseMI GCAATG 3 cut(s) 27, 178, 310
BseMII CTCAG 1 cut(s) 108
BseNI ACTGG 1 cut(s) 65
BseXI GCAGC 1 cut(s) 97
BslI CCNNNNNNNGG 1 cut(s) 187
BspCNI CTCAG 1 cut(s) 109
BsrDI GCAATG 3 cut(s) 27, 178, 310
BsrI ACTGG 1 cut(s) 65
BssECI CCNNGG 1 cut(s) 255
Bst2UI CCWGG 2 cut(s) 198, 256
Bst4CI ACNGT 1 cut(s) 81
BstDEI CTNAG 1 cut(s) 117
BstMWI GCNNNNNNNGC 1 cut(s) 107
BstNI CCWGG 2 cut(s) 198, 256
BstSCI CCNGG 2 cut(s) 196, 254
BstV1I GCAGC 1 cut(s) 97
BtsIMutI CAGTG 2 cut(s) 72, 77
Cfr13I GGNCC 1 cut(s) 62
CsiI ACCWGGT 1 cut(s) 196
Csp6I GTAC 2 cut(s) 194, 288
CviAII CATG 2 cut(s) 339, 344
CviJI RGCY 3 cut(s) 14, 121, 191
CviKI_1 RGCY 3 cut(s) 14, 121, 191
CviQI GTAC 2 cut(s) 194, 288
DdeI CTNAG 1 cut(s) 117
Eco47I GGWCC 1 cut(s) 62
EcoRII CCWGG 2 cut(s) 196, 254
FaeI CATG 2 cut(s) 342, 347
FaiI YATR 8 cut(s) 43, 72, 152, 154, 183, 268, 340, 345
FatI CATG 2 cut(s) 338, 343
Fnu4HI GCNGC 1 cut(s) 111
Fsp4HI GCNGC 1 cut(s) 111
FspBI CTAG 1 cut(s) 333
GluI GCNGC 1 cut(s) 111
Hin1II CATG 2 cut(s) 342, 347
HincII GTYRAC 1 cut(s) 178
HindII GTYRAC 1 cut(s) 178
HphI GGTGA 1 cut(s) 58
Hpy166II GTNNAC 1 cut(s) 178
Hpy188I TCNGA 1 cut(s) 118
Hpy8I GTNNAC 1 cut(s) 178
HpyCH4III ACNGT 1 cut(s) 81
HpyCH4IV ACGT 1 cut(s) 286
HpyCH4V TGCA 1 cut(s) 113
HpyF10VI GCNNNNNNNGC 1 cut(s) 107
HpyF3I CTNAG 1 cut(s) 117
HpySE526I ACGT 1 cut(s) 286
Hsp92II CATG 2 cut(s) 342, 347
LmnI GCTCC 3 cut(s) 168, 320, 352
Lsp1109I GCAGC 1 cut(s) 97
LweI GCATC 1 cut(s) 122
MabI ACCWGGT 1 cut(s) 196
MaeI CTAG 1 cut(s) 333
MaeII ACGT 1 cut(s) 286
MboII GAAGA 1 cut(s) 293
MluCI AATT 1 cut(s) 144
MnlI CCTC 5 cut(s) 3, 53, 257, 306, 333
MseI TTAA 1 cut(s) 143
MspR9I CCNGG 2 cut(s) 198, 256
MvaI CCWGG 2 cut(s) 198, 256
MwoI GCNNNNNNNGC 1 cut(s) 107
NlaIII CATG 2 cut(s) 342, 347
PkrI GCNGC 1 cut(s) 112
Psp6I CCWGG 2 cut(s) 196, 254
PspGI CCWGG 2 cut(s) 196, 254
PspPI GGNCC 1 cut(s) 62
RsaI GTAC 2 cut(s) 195, 289
RsaNI GTAC 2 cut(s) 194, 288
SaqAI TTAA 1 cut(s) 143
SatI GCNGC 1 cut(s) 111
Sau96I GGNCC 1 cut(s) 62
ScrFI CCNGG 2 cut(s) 198, 256
SetI ASST 6 cut(s) 123, 199, 238, 289, 293, 325
SexAI ACCWGGT 1 cut(s) 196
SfaNI GCATC 1 cut(s) 122
SinI GGWCC 1 cut(s) 62
SpeI ACTAGT 1 cut(s) 332
Sse9I AATT 1 cut(s) 144
SspMI CTAG 1 cut(s) 333
StyD4I CCNGG 2 cut(s) 196, 254
TaaI ACNGT 1 cut(s) 81
TaiI ACGT 1 cut(s) 289
TasI AATT 1 cut(s) 144
Tru1I TTAA 1 cut(s) 143
Tru9I TTAA 1 cut(s) 143
TscAI CASTG 2 cut(s) 72, 84
TseI GCWGC 1 cut(s) 110
TspDTI ATGAA 1 cut(s) 327
TspRI CASTG 2 cut(s) 72, 84
VpaK11BI GGWCC 1 cut(s) 62
XspI CTAG 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.