Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0003025

Physical Location & Seq

Genomic Coordinates Forward (+)

3366420 .. 3369007

Gene Structure 2588 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010656

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGTCTGGGTACTCGTTTTTGAACGACCAGCTGTCTCGGCGCACCTCCATTTTCGGGTTACACCTCTGGGTGGTTCTTGGAATTTGTGTCGGAGCAGCCATAGTTCTGGTTCTGTTTCTCATCTCTCTATGGTTCACTTCACGCCGGAACAGTAGTTCGTCAAATTCTAAGGCCACCCAGAACCCGACAATCCCAAATGTCTCCAAGGAGATCCAAGAAATCCGAATCGACTGCTCCCGGAGCACCAACGCCCCGCCCGACCCGAAGCCGGCCCTGCAGCACCCCGACCCGGTTGCGGAGTCGGATCCCCTGGCCAGAGCCCAGGCGGTGCTGCTTCAGCCGGACGAGGAGAGCCCAGCGAGCACTGGAAGGCAGAGGATTCACATTGAAATTGGGAAGGACCATCGGATTTCGTACCCGGAAAAAGGAGGTGGGTCGTCGTACGGGAGCGGCGAGACTCGTTCCGGCGACCAGGGGGGGATCACTGGGCCGGAGGTGTCGCATTTGGGATGGGGGCATTGGTATACACTCAGAGAGCTTGAGGATGCTACTAATGGCTTTGCTGATGAGAATGTGATTGGTGAAGGTGGATATGGGATTGTGTACAGAGGTGTTTTGGAGGATAACTCAATGGTTGCAGTCAAGAATTTGCTCAATAACAAGGGACAGGCTGAGAAGGAGTTCAAGGTTGAAGTTGAAGCAATTGGTCGTGTTCGCCATAAGAATTTAGTGAGGTTGCTTGGCTACTGTGCTGAAGGTGCTCACAGGATGCTTGTGTATGAGTATGTTGACAACGGAAACCTGGAACAATGGCTTCATGGAGATGTCGGGCCTCTCAGCCCTCTGACATGGGAGAATCGCATGAATATAATACTTGGGACAGCGAAAGGGTTGACATACTTGCATGAGGGACTAGAGCCCAAGGTTGTTCACCGTGATATTAAGTCCAGCAACATCTTGCTTGATAAACAGTGGAATTCTAAAGTATCTGACTTTGGCTTAGCAAAGCTCCTGGGCTCAGAAAGGAGTTATGTGACAACTCGTGTGATGGGAACATTTGGATATGTAGCTCCAGAATATGCTAGTACTGGCATGTTGAATGAAAGAAGTGATGTTTATAGTTTTGGGATTCTCATAATGGAGATCATTTCGGGGAGAAACCCAGTAGACTATAGCAGGCCTGCAGGAGAGGTGAACCTAGTTGAATGGCTTAAAACAATGGTTACCAATCGGACCGCCGAGGGAGTTTTAGATCCTAGATTGCCAGAGAAGCCTTCTTCCAGGGCATTGAAGCGTGCTCTTCTGGTTGCCTTACGTTGTGTGGACCCGAATGCTCAGAAGAGGCCAAAAATGGGGCATGTTGTGCATATGCTTGAAGCTGATGAGTTCCCTTTCCGAGATGACCGCAGGCCTGGAAGAGAATATGGACGCTCACCGCGTGATGCTGCAAAGCGTGTTATGGAATCAGGTGATAGTAGCGGGTATGAAAGTGGTGCCCAAACTAACATGTCAGTATGGAGAAAGCAAGAAGTTGAAGAAGAGCGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

516

Amino Acids

57.23

Weight (kDa)

6.39

Isoelectric Point (pI)

42.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	188 - 456	2e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	191 - 458	1.7e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003025)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02630
fragaria_vesca	FvH4_1g16210 FvH4_1g16210 FvH4_1g16210 FvH4_2g34110
malus_domestica	MD02G1174000.v1.1 MD08G1097900.v1.1 MD15G1080000.v1.1
prunus_persica	Prupe.1G433000_v2.0.a1 Prupe.1G433000_v2.0.a1 Prupe.1G433000_v2.0.a1 Prupe.7G131700_v2.0.a1 Prupe.7G131700_v2.0.a1 Prupe.7G131700_v2.0.a1
pyrus_communis	pycom02g14030 pycom08g07980 pycom15g07450 pycom15g24820
rosa_chinensis	RchiOBHm_Chr2g0105911 RchiOBHm_Chr6g0308231
rosa_laevigata	RLG00000010656 RLG00000017469
rosa_multiflora	Rmu_sc0004367.1_g000010
rosa_roxburghii	Rroxscaffold_2G00137580 Rroxscaffold_7G00160330
rosa_rugosa	Rorug02G0131900 Rorug06G0365000 Rorug06G0365000 Rorug06G0365100 Rorug06G0365200
rosa_samantha	Rh2AG182400 Rh2CG187000 Rh6AG474100 Rh6BG484800 Rh6CG489900 Rh6DG476200
rosa_wichuraiana	Rw2G014310 Rw6G041360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1493
AccBSI	CCGCTC	1 cut(s)	450
AccI	GTMKAC	2 cut(s)	524, 1167
AccII	CGCG	1 cut(s)	1438
AciI	CCGC	8 cut(s)	254, 296, 326, 450, 1236, 1405, 1436, 1479
AclWI	GGATC	5 cut(s)	205, 299, 312, 488, 1247
AcoI	YGGCCR	1 cut(s)	312
AcsI	RAATTY	5 cut(s)	81, 163, 646, 724, 976
AcuI	CTGAAG	2 cut(s)	320, 774
AdeI	CACNNNGTG	1 cut(s)	1439
AfaI	GTAC	5 cut(s)	11, 416, 443, 605, 1087
AfiI	CCNNNNNNNGG	7 cut(s)	54, 70, 268, 289, 295, 425, 1352
AflIII	ACRYGT	1 cut(s)	1506
AhdI	GACNNNNNGTC	1 cut(s)	31
AjnI	CCWGG	7 cut(s)	309, 321, 471, 801, 1011, 1280, 1411
AloI	GAACNNNNNNTCC	2 cut(s)	139, 171
AluBI	AGCT	5 cut(s)	31, 538, 1009, 1070, 1379
AluI	AGCT	5 cut(s)	31, 538, 1009, 1070, 1379
Alw21I	GWGCWC	4 cut(s)	245, 365, 763, 1300
Alw26I	GTCTC	3 cut(s)	39, 205, 449
AlwI	GGATC	5 cut(s)	205, 299, 312, 488, 1247
AoxI	GGCC	8 cut(s)	171, 270, 312, 488, 830, 1178, 1343, 1409
ApeKI	GCWGC	4 cut(s)	95, 277, 331, 1445
ApoI	RAATTY	5 cut(s)	81, 163, 646, 724, 976
Asp700I	GAANNNNTTC	1 cut(s)	680
AspLEI	GCGC	1 cut(s)	42
AspS9I	GGNCC	6 cut(s)	271, 400, 488, 830, 1233, 1324
AsuC2I	CCSGG	3 cut(s)	238, 290, 419
AsuHPI	GGTGA	5 cut(s)	593, 923, 1204, 1425, 1481
AvaII	GGWCC	3 cut(s)	400, 1233, 1324
BaeGI	GKGCMC	1 cut(s)	1498
BalI	TGGCCA	1 cut(s)	314
BamHI	GGATCC	1 cut(s)	304
BanI	GGYRCC	1 cut(s)	1493
BanII	GRGCYC	4 cut(s)	322, 356, 921, 1019
BauI	CACGAG	1 cut(s)	1041
Bbv12I	GWGCWC	4 cut(s)	245, 365, 763, 1300
BbvI	GCAGC	4 cut(s)	107, 289, 318, 1432
BccI	CCATC	3 cut(s)	411, 504, 1042
BcgI	CGANNNNNNTGC	4 cut(s)	213, 247, 275, 309
BciT130I	CCWGG	7 cut(s)	311, 323, 473, 803, 1013, 1282, 1413
BcnI	CCSGG	3 cut(s)	238, 290, 419
BcoDI	GTCTC	3 cut(s)	39, 205, 449
BfaI	CTAG	4 cut(s)	914, 1083, 1199, 1257
BfmI	CTRYAG	3 cut(s)	275, 1171, 1182
BisI	GCNGC	5 cut(s)	96, 278, 332, 451, 1446
BlpI	GCTNAGC	1 cut(s)	1000
BlsI	GCNGC	5 cut(s)	97, 279, 333, 452, 1447
BmcAI	AGTACT	1 cut(s)	1087
Bme18I	GGWCC	3 cut(s)	400, 1233, 1324
BmeRI	GACNNNNNGTC	1 cut(s)	31
BmgT120I	GGNCC	6 cut(s)	271, 400, 488, 830, 1233, 1324
BmiI	GGNNCC	3 cut(s)	306, 1326, 1495
BmrI	ACTGGG	2 cut(s)	495, 1157
BmsI	GCATC	3 cut(s)	535, 759, 1432
BmuI	ACTGGG	2 cut(s)	495, 1157
BplI	GAGNNNNNCTC	2 cut(s)	611, 643
BpmI	CTGGAG	1 cut(s)	1056
Bpu1102I	GCTNAGC	1 cut(s)	1000
BpuEI	CTTGAG	1 cut(s)	560
BpuMI	CCSGG	3 cut(s)	238, 290, 419
BsaJI	CCNNGG	8 cut(s)	204, 309, 321, 472, 921, 1012, 1239, 1281
Bsc4I	CCNNNNNNNGG	7 cut(s)	54, 70, 268, 289, 295, 425, 1352
Bse118I	RCCGGY	1 cut(s)	268
Bse1I	ACTGG	4 cut(s)	370, 490, 1093, 1163
BseBI	CCWGG	7 cut(s)	311, 323, 473, 803, 1013, 1282, 1413
BseDI	CCNNGG	8 cut(s)	204, 309, 321, 472, 921, 1012, 1239, 1281
BseGI	GGATG	3 cut(s)	515, 550, 774
BseLI	CCNNNNNNNGG	7 cut(s)	54, 70, 268, 289, 295, 425, 1352
BseMII	CTCAG	5 cut(s)	544, 663, 850, 1032, 1349
BseNI	ACTGG	4 cut(s)	370, 490, 1093, 1163
BseRI	GAGGAG	1 cut(s)	362
BseSI	GKGCMC	1 cut(s)	1498
BseXI	GCAGC	4 cut(s)	107, 289, 318, 1432
BseYI	CCCAGC	1 cut(s)	355
Bsh1236I	CGCG	1 cut(s)	1438
BshFI	GGCC	8 cut(s)	173, 272, 314, 490, 832, 1180, 1345, 1411
BshNI	GGYRCC	1 cut(s)	1493
BsiHKAI	GWGCWC	4 cut(s)	245, 365, 763, 1300
BsiSI	CCGG	8 cut(s)	145, 238, 269, 290, 341, 419, 465, 491
BsiWI	CGTACG	1 cut(s)	441
BslFI	GGGAC	3 cut(s)	678, 892, 924
BslI	CCNNNNNNNGG	7 cut(s)	54, 70, 268, 289, 295, 425, 1352
BsmAI	GTCTC	3 cut(s)	39, 205, 449
BsmFI	GGGAC	3 cut(s)	678, 892, 924
BsmI	GAATGC	1 cut(s)	1336
BsnI	GGCC	8 cut(s)	173, 272, 314, 490, 832, 1180, 1345, 1411
Bsp1286I	GDGCHC	9 cut(s)	245, 322, 356, 365, 763, 921, 1019, 1300, 1498
Bsp1407I	TGTACA	1 cut(s)	603
Bsp143I	GATC	5 cut(s)	210, 304, 480, 1143, 1252
Bsp1720I	GCTNAGC	1 cut(s)	1000
BspACI	CCGC	8 cut(s)	254, 296, 326, 450, 1236, 1405, 1436, 1479
BspANI	GGCC	8 cut(s)	173, 272, 314, 490, 832, 1180, 1345, 1411
BspCNI	CTCAG	5 cut(s)	543, 664, 849, 1031, 1348
BspFNI	CGCG	1 cut(s)	1438
BspLI	GGNNCC	3 cut(s)	306, 1326, 1495
BspMAI	CTGCAG	2 cut(s)	279, 1186
BspPI	GGATC	5 cut(s)	205, 299, 312, 488, 1247
BspQI	GCTCTTC	2 cut(s)	1305, 1533
BspT107I	GGYRCC	1 cut(s)	1493
BsrBI	CCGCTC	1 cut(s)	450
BsrFI	RCCGGY	1 cut(s)	268
BsrGI	TGTACA	1 cut(s)	603
BsrI	ACTGG	4 cut(s)	370, 490, 1093, 1163
BssAI	RCCGGY	1 cut(s)	268
BssECI	CCNNGG	8 cut(s)	204, 309, 321, 472, 921, 1012, 1239, 1281
BssMI	GATC	5 cut(s)	210, 304, 480, 1143, 1252
BssNAI	GTATAC	1 cut(s)	525
BssSI	CACGAG	1 cut(s)	1041
BssT1I	CCWWGG	2 cut(s)	204, 921
Bst1107I	GTATAC	1 cut(s)	525
Bst2BI	CACGAG	1 cut(s)	1041
Bst2UI	CCWGG	7 cut(s)	311, 323, 473, 803, 1013, 1282, 1413
Bst4CI	ACNGT	4 cut(s)	152, 749, 935, 972
Bst6I	CTCTTC	4 cut(s)	1305, 1334, 1411, 1533
BstAPI	GCANNNNNTGC	1 cut(s)	1363
BstAUI	TGTACA	1 cut(s)	603
BstC8I	GCNNGC	6 cut(s)	270, 361, 1178, 1182, 1296, 1409
BstDEI	CTNAG	7 cut(s)	168, 530, 672, 836, 1000, 1018, 1335
BstEII	GGTNACC	1 cut(s)	1222
BstF5I	GGATG	3 cut(s)	515, 550, 774
BstFNI	CGCG	1 cut(s)	1438
BstHHI	GCGC	1 cut(s)	42
BstKTI	GATC	5 cut(s)	213, 307, 483, 1146, 1255
BstMAI	GTCTC	3 cut(s)	39, 205, 449
BstMBI	GATC	5 cut(s)	210, 304, 480, 1143, 1252
BstMWI	GCNNNNNNNGC	8 cut(s)	37, 240, 274, 337, 360, 758, 1270, 1363
BstNI	CCWGG	7 cut(s)	311, 323, 473, 803, 1013, 1282, 1413
BstNSI	RCATGY	3 cut(s)	1096, 1361, 1510
BstPI	GGTNACC	1 cut(s)	1222
BstSFI	CTRYAG	3 cut(s)	275, 1171, 1182
BstSLI	GKGCMC	1 cut(s)	1498
BstUI	CGCG	1 cut(s)	1438
BstV1I	GCAGC	4 cut(s)	107, 289, 318, 1432
BstX2I	RGATCY	3 cut(s)	210, 304, 1252
BstXI	CCANNNNNNTGG	1 cut(s)	106
BstYI	RGATCY	3 cut(s)	210, 304, 1252
BstZ17I	GTATAC	1 cut(s)	525
BsuRI	GGCC	8 cut(s)	173, 272, 314, 490, 832, 1180, 1345, 1411
BtsCI	GGATG	3 cut(s)	515, 550, 774
BtsIMutI	CAGTG	3 cut(s)	363, 483, 977
Cac8I	GCNNGC	6 cut(s)	270, 361, 1178, 1182, 1296, 1409
CfoI	GCGC	1 cut(s)	42
Cfr10I	RCCGGY	1 cut(s)	268
Cfr13I	GGNCC	6 cut(s)	271, 400, 488, 830, 1233, 1324
CpoI	CGGWCCG	1 cut(s)	1233
CseI	GACGC	1 cut(s)	1437
Csp6I	GTAC	5 cut(s)	10, 415, 442, 604, 1086
CspI	CGGWCCG	1 cut(s)	1233
CviAII	CATG	7 cut(s)	818, 849, 862, 905, 1093, 1358, 1507
CviQI	GTAC	5 cut(s)	10, 415, 442, 604, 1086
DdeI	CTNAG	7 cut(s)	168, 530, 672, 836, 1000, 1018, 1335
DpnI	GATC	5 cut(s)	212, 306, 482, 1145, 1254
DpnII	GATC	5 cut(s)	210, 304, 480, 1143, 1252
DraIII	CACNNNGTG	1 cut(s)	1439
DriI	GACNNNNNGTC	1 cut(s)	31
EaeI	YGGCCR	1 cut(s)	312
Eam1104I	CTCTTC	4 cut(s)	1305, 1334, 1411, 1533
Eam1105I	GACNNNNNGTC	1 cut(s)	31
EarI	CTCTTC	4 cut(s)	1305, 1334, 1411, 1533
Eco130I	CCWWGG	2 cut(s)	204, 921
Eco147I	AGGCCT	2 cut(s)	1180, 1411
Eco24I	GRGCYC	4 cut(s)	322, 356, 921, 1019
Eco47I	GGWCC	3 cut(s)	400, 1233, 1324
Eco57I	CTGAAG	2 cut(s)	320, 774
Eco91I	GGTNACC	1 cut(s)	1222
EcoO65I	GGTNACC	1 cut(s)	1222
EcoRI	GAATTC	1 cut(s)	976
EcoRII	CCWGG	7 cut(s)	309, 321, 471, 801, 1011, 1280, 1411
EcoT14I	CCWWGG	2 cut(s)	204, 921
EcoT38I	GRGCYC	4 cut(s)	322, 356, 921, 1019
ErhI	CCWWGG	2 cut(s)	204, 921
FaeI	CATG	7 cut(s)	821, 852, 865, 908, 1096, 1361, 1510
FaqI	GGGAC	3 cut(s)	678, 892, 924
FatI	CATG	7 cut(s)	817, 848, 861, 904, 1092, 1357, 1506
FauI	CCCGC	2 cut(s)	261, 1472
FauNDI	CATATG	1 cut(s)	1368
FblI	GTMKAC	2 cut(s)	524, 1167
Fnu4HI	GCNGC	5 cut(s)	96, 278, 332, 451, 1446
FokI	GGATG	3 cut(s)	522, 557, 781
FriOI	GRGCYC	4 cut(s)	322, 356, 921, 1019
Fsp4HI	GCNGC	5 cut(s)	96, 278, 332, 451, 1446
FspBI	CTAG	4 cut(s)	914, 1083, 1199, 1257
GlaI	GCGC	1 cut(s)	41
GluI	GCNGC	5 cut(s)	96, 278, 332, 451, 1446
GsaI	CCCAGC	1 cut(s)	359
GsuI	CTGGAG	1 cut(s)	1056
HaeIII	GGCC	8 cut(s)	173, 272, 314, 490, 832, 1180, 1345, 1411
HapII	CCGG	8 cut(s)	145, 238, 269, 290, 341, 419, 465, 491
HgaI	GACGC	1 cut(s)	1437
HhaI	GCGC	1 cut(s)	42
Hin1II	CATG	7 cut(s)	821, 852, 865, 908, 1096, 1361, 1510
Hin6I	GCGC	1 cut(s)	40
HinP1I	GCGC	1 cut(s)	40
HincII	GTYRAC	2 cut(s)	790, 894
HindII	GTYRAC	2 cut(s)	790, 894
HinfI	GANTC	7 cut(s)	225, 299, 379, 457, 856, 1129, 1463
HpaII	CCGG	8 cut(s)	145, 238, 269, 290, 341, 419, 465, 491
HphI	GGTGA	5 cut(s)	593, 923, 1204, 1425, 1481
Hpy166II	GTNNAC	9 cut(s)	135, 525, 604, 790, 894, 931, 1168, 1195, 1324
Hpy188III	TCNNGA	2 cut(s)	643, 1073
Hpy8I	GTNNAC	9 cut(s)	135, 525, 604, 790, 894, 931, 1168, 1195, 1324
Hpy99I	CGWCG	1 cut(s)	442
HpyAV	CCTTC	6 cut(s)	363, 391, 578, 670, 749, 1284
HpyCH4III	ACNGT	4 cut(s)	152, 749, 935, 972
HpyCH4IV	ACGT	1 cut(s)	1315
HpyCH4V	TGCA	6 cut(s)	277, 638, 904, 1184, 1366, 1448
HpyF10VI	GCNNNNNNNGC	8 cut(s)	37, 240, 274, 337, 360, 758, 1270, 1363
HpyF3I	CTNAG	7 cut(s)	168, 530, 672, 836, 1000, 1018, 1335
HpySE526I	ACGT	1 cut(s)	1315
Hsp92II	CATG	7 cut(s)	821, 852, 865, 908, 1096, 1361, 1510
HspAI	GCGC	1 cut(s)	40
KroI	GCCGGC	1 cut(s)	268
KroNI	GCCGGC	1 cut(s)	270
Kzo9I	GATC	5 cut(s)	210, 304, 480, 1143, 1252
LguI	GCTCTTC	2 cut(s)	1305, 1533
LmnI	GCTCC	6 cut(s)	92, 239, 240, 447, 1014, 1075
Lsp1109I	GCAGC	4 cut(s)	107, 289, 318, 1432
LweI	GCATC	3 cut(s)	535, 759, 1432
MaeI	CTAG	4 cut(s)	914, 1083, 1199, 1257
MaeII	ACGT	1 cut(s)	1315
MaeIII	GTNAC	3 cut(s)	57, 1033, 1222
MalI	GATC	5 cut(s)	212, 306, 482, 1145, 1254
MbiI	CCGCTC	1 cut(s)	450
MboI	GATC	5 cut(s)	210, 304, 480, 1143, 1252
MboII	GAAGA	5 cut(s)	1269, 1292, 1351, 1428, 1547
MfeI	CAATTG	1 cut(s)	702
MflI	RGATCY	3 cut(s)	210, 304, 1252
MhlI	GDGCHC	9 cut(s)	245, 322, 356, 365, 763, 921, 1019, 1300, 1498
MlsI	TGGCCA	1 cut(s)	314
MluCI	AATT	7 cut(s)	81, 163, 390, 646, 702, 724, 976
MluNI	TGGCCA	1 cut(s)	314
MlyI	GAGTC	2 cut(s)	308, 451
MmeI	TCCRAC	2 cut(s)	70, 282
Mox20I	TGGCCA	1 cut(s)	314
MroNI	GCCGGC	1 cut(s)	268
MroXI	GAANNNNTTC	1 cut(s)	680
MscI	TGGCCA	1 cut(s)	314
MseI	TTAA	2 cut(s)	942, 1212
MslI	CAYNNNNRTG	1 cut(s)	822
Msp20I	TGGCCA	1 cut(s)	314
MspA1I	CMGCKG	1 cut(s)	31
MspI	CCGG	8 cut(s)	145, 238, 269, 290, 341, 419, 465, 491
MunI	CAATTG	1 cut(s)	702
Mva1269I	GAATGC	1 cut(s)	1336
MvaI	CCWGG	7 cut(s)	311, 323, 473, 803, 1013, 1282, 1413
MvnI	CGCG	1 cut(s)	1438
MwoI	GCNNNNNNNGC	8 cut(s)	37, 240, 274, 337, 360, 758, 1270, 1363
NaeI	GCCGGC	1 cut(s)	270
NciI	CCSGG	3 cut(s)	238, 290, 419
NdeI	CATATG	1 cut(s)	1368
NdeII	GATC	5 cut(s)	210, 304, 480, 1143, 1252
NgoMIV	GCCGGC	1 cut(s)	268
NlaIII	CATG	7 cut(s)	821, 852, 865, 908, 1096, 1361, 1510
NlaIV	GGNNCC	3 cut(s)	306, 1326, 1495
NmeAIII	GCCGAG	2 cut(s)	16, 1264
NmuCI	GTSAC	1 cut(s)	1033
NspI	RCATGY	3 cut(s)	1096, 1361, 1510
PceI	AGGCCT	2 cut(s)	1180, 1411
PciI	ACATGT	1 cut(s)	1506
PciSI	GCTCTTC	2 cut(s)	1305, 1533
PcsI	WCGNNNNNNNCGW	3 cut(s)	255, 450, 1435
PctI	GAATGC	1 cut(s)	1336
PdiI	GCCGGC	1 cut(s)	270
PdmI	GAANNNNTTC	1 cut(s)	680
PfeI	GAWTC	5 cut(s)	225, 379, 856, 1129, 1463
Pfl23II	CGTACG	1 cut(s)	441
PfoI	TCCNGGA	1 cut(s)	236
PkrI	GCNGC	5 cut(s)	97, 279, 333, 452, 1447
PleI	GAGTC	2 cut(s)	307, 451
PpsI	GAGTC	2 cut(s)	307, 451
PscI	ACATGT	1 cut(s)	1506
Psp6I	CCWGG	7 cut(s)	309, 321, 471, 801, 1011, 1280, 1411
PspEI	GGTNACC	1 cut(s)	1222
PspFI	CCCAGC	1 cut(s)	355
PspGI	CCWGG	7 cut(s)	309, 321, 471, 801, 1011, 1280, 1411
PspLI	CGTACG	1 cut(s)	441
PspN4I	GGNNCC	3 cut(s)	306, 1326, 1495
PspPI	GGNCC	6 cut(s)	271, 400, 488, 830, 1233, 1324
PstI	CTGCAG	2 cut(s)	279, 1186
PsuI	RGATCY	3 cut(s)	210, 304, 1252
PvuII	CAGCTG	1 cut(s)	31
RsaI	GTAC	5 cut(s)	11, 416, 443, 605, 1087
RsaNI	GTAC	5 cut(s)	10, 415, 442, 604, 1086
RseI	CAYNNNNRTG	1 cut(s)	822
Rsr2I	CGGWCCG	1 cut(s)	1233
RsrII	CGGWCCG	1 cut(s)	1233
SapI	GCTCTTC	2 cut(s)	1305, 1533
SaqAI	TTAA	2 cut(s)	942, 1212
SatI	GCNGC	5 cut(s)	96, 278, 332, 451, 1446
Sau3AI	GATC	5 cut(s)	210, 304, 480, 1143, 1252
Sau96I	GGNCC	6 cut(s)	271, 400, 488, 830, 1233, 1324
SbfI	CCTGCAGG	1 cut(s)	1186
ScaI	AGTACT	1 cut(s)	1087
SchI	GAGTC	2 cut(s)	308, 451
SdaI	CCTGCAGG	1 cut(s)	1186
SduI	GDGCHC	9 cut(s)	245, 322, 356, 365, 763, 921, 1019, 1300, 1498
SfaNI	GCATC	3 cut(s)	535, 759, 1432
SfcI	CTRYAG	3 cut(s)	275, 1171, 1182
SinI	GGWCC	3 cut(s)	400, 1233, 1324
SmiMI	CAYNNNNRTG	1 cut(s)	822
SmlI	CTYRAG	1 cut(s)	539
SmoI	CTYRAG	1 cut(s)	539
Sse8387I	CCTGCAGG	1 cut(s)	1186
Sse9I	AATT	7 cut(s)	81, 163, 390, 646, 702, 724, 976
SseBI	AGGCCT	2 cut(s)	1180, 1411
SsiI	CCGC	8 cut(s)	254, 296, 326, 450, 1236, 1405, 1436, 1479
SspMI	CTAG	4 cut(s)	914, 1083, 1199, 1257
StuI	AGGCCT	2 cut(s)	1180, 1411
StyI	CCWWGG	2 cut(s)	204, 921
TaaI	ACNGT	4 cut(s)	152, 749, 935, 972
TaiI	ACGT	1 cut(s)	1318
TaqI	TCGA	1 cut(s)	228
TasI	AATT	7 cut(s)	81, 163, 390, 646, 702, 724, 976
TatI	WGTACW	2 cut(s)	603, 1085
TauI	GCSGC	1 cut(s)	453
TfiI	GAWTC	5 cut(s)	225, 379, 856, 1129, 1463
Tru1I	TTAA	2 cut(s)	942, 1212
Tru9I	TTAA	2 cut(s)	942, 1212
TscAI	CASTG	3 cut(s)	370, 490, 977
TseFI	GTSAC	1 cut(s)	1033
TseI	GCWGC	4 cut(s)	95, 277, 331, 1445
Tsp45I	GTSAC	1 cut(s)	1033
TspDTI	ATGAA	4 cut(s)	806, 878, 1116, 1500
TspGWI	ACGGA	1 cut(s)	810
TspRI	CASTG	3 cut(s)	370, 490, 977
VpaK11BI	GGWCC	3 cut(s)	400, 1233, 1324
XapI	RAATTY	5 cut(s)	81, 163, 646, 724, 976
XceI	RCATGY	3 cut(s)	1096, 1361, 1510
XmiI	GTMKAC	2 cut(s)	524, 1167
XmnI	GAANNNNTTC	1 cut(s)	680
XspI	CTAG	4 cut(s)	914, 1083, 1199, 1257
ZrmI	AGTACT	1 cut(s)	1087

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.