MD02G1189300.v1.1
BZIP Family

basic region leucin zipper

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0015240
Physical Location & Seq
Forward (+)
17334289 .. 17334975
687 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1189300.v1.1.491

Sequence Viewer

Length: 687 bp
ATGAAGCACCAACGCATCGTTCCTTCCCTTTCCTCCTTCCCCCCTCCCTCTCCATCTAAATTAGAAGTTCAGAGAGCTTTTGTTGTAGCAACCATGTTGTCTACTCTTCCAGCCAATCTTCCCTCTGATTCCCTCCTCCATTTTTCAGCTTTCGACGGGGGCTTTACCCCGTGGGATTGCTCGGACCTTTTTCAGGCAACGCCATCCCCTAAACCAGTGATATCAACCCTAAGTTCATCTCCAGTTCAGTCTTCCAAAACAGTGATTTCGAGTTCTTGTTCGGATGACGACCCGAACCGGCCGGACCGGACCCATGCCAACGCGAAGTCATGCCAAAATGACGACTCGAACCGGACGGTTTCTGTGGTGGACGAGCGGAAGAGGAGGCGGATGATATCGAACCGGGAGTCAGCCAGGCGGTCACGGATGCGAAAACAAAAGCACTTAGAAAACCTACGGAATCAGGTGAACCGGCTTAGGGTTGTGAACCGGGAATTGAACAACCGGTTGAGGATCGTTTTGTACCATTTTCAGCGCGTACGGACAGACAACGATAGGCTCCGATCCGACCACGTTATGCTCCGGCAGAAATTGTCGGACATACGTCGAATTTTGGTTTTCAGTCAACTACAGCACTTTTCTTCTGCATGGCCGTGCAATACCATTATTCCAGAACAAACCCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
bZIP_1 bZIP_2

Protein Analysis

229

Amino Acids

26.18

Weight (kDa)

10.77

Isoelectric Point (pI)

63.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_1 PF00170 126 - 170 2.7e-07 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015240)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G49760
malus_domestica MD02G1189300.v1.1 MD15G1300200.v1.1
prunus_persica Prupe.6G217300_v2.0.a1
pyrus_communis pycom02g15350 pycom15g26280
rosa_chinensis RchiOBHm_Chr2g0108691
rosa_laevigata RLG00000017685
rosa_multiflora Rmu_co8051662.1_g000001
rosa_roxburghii Rroxscaffold_2G00134910
rosa_rugosa Rorug02G0155200
rosa_samantha Rh2AG204900 Rh2BG216800 Rh2CG208000 Rh2DG211200
rosa_wichuraiana Rw2G016320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 376
AccI GTMKAC 1 cut(s) 101
AccII CGCG 2 cut(s) 323, 537
AciI CCGC 3 cut(s) 376, 388, 418
AclWI GGATC 2 cut(s) 521, 558
AcoI YGGCCR 2 cut(s) 299, 650
AcsI RAATTY 1 cut(s) 609
AfaI GTAC 2 cut(s) 524, 540
AfiI CCNNNNNNNGG 2 cut(s) 193, 478
AgeI ACCGGT 1 cut(s) 504
AgsI TTSAA 1 cut(s) 499
AjnI CCWGG 1 cut(s) 413
AjuI GAANNNNNNNTTGG 1 cut(s) 35
AluBI AGCT 2 cut(s) 77, 149
AluI AGCT 2 cut(s) 77, 149
AlwI GGATC 2 cut(s) 521, 558
AoxI GGCC 2 cut(s) 299, 650
ApoI RAATTY 1 cut(s) 609
ArsI GACNNNNNNTTYG 2 cut(s) 392, 424
AsiGI ACCGGT 1 cut(s) 504
AspLEI GCGC 1 cut(s) 537
AspS9I GGNCC 3 cut(s) 184, 304, 309
AsuC2I CCSGG 2 cut(s) 404, 491
AsuHPI GGTGA 1 cut(s) 478
AvaII GGWCC 3 cut(s) 184, 304, 309
BbsI GAAGAC 1 cut(s) 243
BccI CCATC 2 cut(s) 61, 211
BceAI ACGGC 1 cut(s) 637
BciT130I CCWGG 1 cut(s) 415
BcnI CCSGG 2 cut(s) 404, 491
BfmI CTRYAG 1 cut(s) 629
Bme1390I CCNGG 3 cut(s) 404, 415, 491
Bme18I GGWCC 3 cut(s) 184, 304, 309
BmgT120I GGNCC 3 cut(s) 184, 304, 309
BmiI GGNNCC 2 cut(s) 311, 560
BmrFI CCNGG 3 cut(s) 404, 415, 491
BmsI GCATC 2 cut(s) 24, 417
BoxI GACNNNNGTC 1 cut(s) 603
BpiI GAAGAC 1 cut(s) 243
BpmI CTGGAG 1 cut(s) 225
Bpu10I CCTNAGC 1 cut(s) 476
BpuMI CCSGG 2 cut(s) 404, 491
BsaJI CCNNGG 1 cut(s) 170
BsaWI WCCGGW 3 cut(s) 306, 351, 504
Bsc4I CCNNNNNNNGG 2 cut(s) 193, 478
Bse118I RCCGGY 3 cut(s) 297, 471, 504
Bse1I ACTGG 2 cut(s) 215, 242
BseBI CCWGG 1 cut(s) 415
BseDI CCNNGG 1 cut(s) 170
BseGI GGATG 4 cut(s) 203, 289, 396, 432
BseLI CCNNNNNNNGG 2 cut(s) 193, 478
BseNI ACTGG 2 cut(s) 215, 242
BseRI GAGGAG 2 cut(s) 125, 397
BseX3I CGGCCG 1 cut(s) 299
Bsh1236I CGCG 2 cut(s) 323, 537
Bsh1285I CGRYCG 1 cut(s) 302
BshFI GGCC 2 cut(s) 301, 652
BshTI ACCGGT 1 cut(s) 504
BsiEI CGRYCG 1 cut(s) 302
BsiSI CCGG 9 cut(s) 298, 302, 307, 352, 403, 472, 490, 505, 583
BsiWI CGTACG 1 cut(s) 538
BslI CCNNNNNNNGG 2 cut(s) 193, 478
BsnI GGCC 2 cut(s) 301, 652
Bsp143I GATC 2 cut(s) 513, 563
BspACI CCGC 3 cut(s) 376, 388, 418
BspANI GGCC 2 cut(s) 301, 652
BspFNI CGCG 2 cut(s) 323, 537
BspLI GGNNCC 2 cut(s) 311, 560
BspPI GGATC 2 cut(s) 521, 558
BsrBI CCGCTC 1 cut(s) 376
BsrFI RCCGGY 3 cut(s) 297, 471, 504
BsrI ACTGG 2 cut(s) 215, 242
BssAI RCCGGY 3 cut(s) 297, 471, 504
BssECI CCNNGG 1 cut(s) 170
BssMI GATC 2 cut(s) 513, 563
Bst2UI CCWGG 1 cut(s) 415
Bst4CI ACNGT 2 cut(s) 262, 358
Bst6I CTCTTC 2 cut(s) 111, 374
BstDEI CTNAG 3 cut(s) 230, 445, 476
BstDSI CCRYGG 1 cut(s) 170
BstENI CCTNNNNNAGG 1 cut(s) 191
BstF5I GGATG 4 cut(s) 203, 289, 396, 432
BstFNI CGCG 2 cut(s) 323, 537
BstHHI GCGC 1 cut(s) 537
BstKTI GATC 2 cut(s) 516, 566
BstMBI GATC 2 cut(s) 513, 563
BstMCI CGRYCG 1 cut(s) 302
BstNI CCWGG 1 cut(s) 415
BstPAI GACNNNNGTC 1 cut(s) 603
BstSCI CCNGG 3 cut(s) 402, 413, 489
BstSFI CTRYAG 1 cut(s) 629
BstUI CGCG 2 cut(s) 323, 537
BstV2I GAAGAC 1 cut(s) 243
BstZI CGGCCG 1 cut(s) 299
BsuRI GGCC 2 cut(s) 301, 652
BtgI CCRYGG 1 cut(s) 170
BtsCI GGATG 4 cut(s) 203, 289, 396, 432
BtsIMutI CAGTG 2 cut(s) 222, 267
CfoI GCGC 1 cut(s) 537
Cfr10I RCCGGY 3 cut(s) 297, 471, 504
Cfr13I GGNCC 3 cut(s) 184, 304, 309
CpoI CGGWCCG 1 cut(s) 304
Csp6I GTAC 2 cut(s) 523, 539
CspAI ACCGGT 1 cut(s) 504
CspI CGGWCCG 1 cut(s) 304
CviAII CATG 4 cut(s) 94, 314, 330, 648
CviJI RGCY 9 cut(s) 77, 113, 149, 162, 301, 413, 475, 559, 652
CviKI_1 RGCY 9 cut(s) 77, 113, 149, 162, 301, 413, 475, 559, 652
CviQI GTAC 2 cut(s) 523, 539
DdeI CTNAG 3 cut(s) 230, 445, 476
DpnI GATC 2 cut(s) 515, 565
DpnII GATC 2 cut(s) 513, 563
EaeI YGGCCR 2 cut(s) 299, 650
EagI CGGCCG 1 cut(s) 299
Eam1104I CTCTTC 2 cut(s) 111, 374
EarI CTCTTC 2 cut(s) 111, 374
EciI GGCGGA 1 cut(s) 403
EclXI CGGCCG 1 cut(s) 299
Eco32I GATATC 2 cut(s) 222, 396
Eco47I GGWCC 3 cut(s) 184, 304, 309
Eco52I CGGCCG 1 cut(s) 299
EcoNI CCTNNNNNAGG 1 cut(s) 191
EcoRII CCWGG 1 cut(s) 413
EcoRV GATATC 2 cut(s) 222, 396
FaeI CATG 4 cut(s) 97, 317, 333, 651
FaiI YATR 7 cut(s) 95, 315, 331, 578, 602, 649, 685
FatI CATG 4 cut(s) 93, 313, 329, 647
FblI GTMKAC 1 cut(s) 101
FokI GGATG 4 cut(s) 190, 296, 403, 439
GlaI GCGC 1 cut(s) 536
GsuI CTGGAG 1 cut(s) 225
HaeIII GGCC 2 cut(s) 301, 652
HapII CCGG 9 cut(s) 298, 302, 307, 352, 403, 472, 490, 505, 583
HhaI GCGC 1 cut(s) 537
Hin1II CATG 4 cut(s) 97, 317, 333, 651
Hin6I GCGC 1 cut(s) 535
HinP1I GCGC 1 cut(s) 535
HincII GTYRAC 1 cut(s) 626
HindII GTYRAC 1 cut(s) 626
HinfI GANTC 4 cut(s) 128, 344, 407, 460
HpaII CCGG 9 cut(s) 298, 302, 307, 352, 403, 472, 490, 505, 583
HphI GGTGA 1 cut(s) 478
Hpy166II GTNNAC 5 cut(s) 102, 370, 469, 487, 626
Hpy188I TCNGA 7 cut(s) 72, 127, 184, 283, 563, 568, 598
Hpy188III TCNNGA 1 cut(s) 671
Hpy8I GTNNAC 5 cut(s) 102, 370, 469, 487, 626
Hpy99I CGWCG 2 cut(s) 158, 609
HpyAV CCTTC 2 cut(s) 33, 46
HpyCH4III ACNGT 2 cut(s) 262, 358
HpyCH4IV ACGT 2 cut(s) 573, 604
HpyCH4V TGCA 2 cut(s) 647, 657
HpyF3I CTNAG 3 cut(s) 230, 445, 476
HpySE526I ACGT 2 cut(s) 573, 604
Hsp92II CATG 4 cut(s) 97, 317, 333, 651
HspAI GCGC 1 cut(s) 535
Kzo9I GATC 2 cut(s) 513, 563
LmnI GCTCC 2 cut(s) 564, 585
LweI GCATC 2 cut(s) 24, 417
MaeII ACGT 2 cut(s) 573, 604
MaeIII GTNAC 1 cut(s) 420
MalI GATC 2 cut(s) 515, 565
MbiI CCGCTC 1 cut(s) 376
MboI GATC 2 cut(s) 513, 563
MboII GAAGA 5 cut(s) 98, 110, 243, 391, 633
MluCI AATT 4 cut(s) 59, 494, 590, 609
MlyI GAGTC 2 cut(s) 338, 416
MmeI TCCRAC 2 cut(s) 576, 591
MnlI CCTC 9 cut(s) 43, 54, 58, 133, 143, 146, 375, 378, 504
MslI CAYNNNNRTG 1 cut(s) 652
MspI CCGG 9 cut(s) 298, 302, 307, 352, 403, 472, 490, 505, 583
MspR9I CCNGG 3 cut(s) 404, 415, 491
MvaI CCWGG 1 cut(s) 415
MvnI CGCG 2 cut(s) 323, 537
NciI CCSGG 2 cut(s) 404, 491
NdeII GATC 2 cut(s) 513, 563
NlaIII CATG 4 cut(s) 97, 317, 333, 651
NlaIV GGNNCC 2 cut(s) 311, 560
NmuCI GTSAC 1 cut(s) 420
PfeI GAWTC 2 cut(s) 128, 460
Pfl23II CGTACG 1 cut(s) 538
PinAI ACCGGT 1 cut(s) 504
PleI GAGTC 2 cut(s) 338, 415
PpsI GAGTC 2 cut(s) 338, 415
PshAI GACNNNNGTC 1 cut(s) 603
Psp6I CCWGG 1 cut(s) 413
PspGI CCWGG 1 cut(s) 413
PspLI CGTACG 1 cut(s) 538
PspN4I GGNNCC 2 cut(s) 311, 560
PspPI GGNCC 3 cut(s) 184, 304, 309
RsaI GTAC 2 cut(s) 524, 540
RsaNI GTAC 2 cut(s) 523, 539
RseI CAYNNNNRTG 1 cut(s) 652
Rsr2I CGGWCCG 1 cut(s) 304
RsrII CGGWCCG 1 cut(s) 304
Sau3AI GATC 2 cut(s) 513, 563
Sau96I GGNCC 3 cut(s) 184, 304, 309
SchI GAGTC 2 cut(s) 338, 416
ScrFI CCNGG 3 cut(s) 404, 415, 491
SetI ASST 7 cut(s) 79, 151, 189, 456, 468, 576, 607
SfaNI GCATC 2 cut(s) 24, 417
SfcI CTRYAG 1 cut(s) 629
SinI GGWCC 3 cut(s) 184, 304, 309
SmiMI CAYNNNNRTG 1 cut(s) 652
Sse9I AATT 4 cut(s) 59, 494, 590, 609
SsiI CCGC 3 cut(s) 376, 388, 418
StyD4I CCNGG 3 cut(s) 402, 413, 489
TaaI ACNGT 2 cut(s) 262, 358
TaiI ACGT 2 cut(s) 576, 607
TaqI TCGA 5 cut(s) 153, 269, 347, 398, 607
TasI AATT 4 cut(s) 59, 494, 590, 609
TfiI GAWTC 2 cut(s) 128, 460
TscAI CASTG 2 cut(s) 222, 267
TseFI GTSAC 1 cut(s) 420
Tsp45I GTSAC 1 cut(s) 420
TspDTI ATGAA 2 cut(s) 17, 225
TspGWI ACGGA 3 cut(s) 439, 472, 556
TspRI CASTG 2 cut(s) 222, 267
VpaK11BI GGWCC 3 cut(s) 184, 304, 309
XagI CCTNNNNNAGG 1 cut(s) 191
XapI RAATTY 1 cut(s) 609
XmiI GTMKAC 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.