pycom15g26280
BZIP Family

basic region leucin zipper

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0015240
Physical Location & Seq
Forward (+)
21080970 .. 21081572
603 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g26280.1

Sequence Viewer

Length: 603 bp
ATGTTGTCTGCTGTTCCAGCCATGCTTCCCTCTGACTCCCTCCTCCATTTTCCCACTTTCGACGGGGGCTTTACCCCCGGCGGTTTCACCCCGTGGGATTGCTCGGAGCATTTTCCGGCAATCCCATCACCAATACCCGTGATCTCAACCCCAAGTTCATCTCTGGTTCAGTCTCCCAAAACAGTAATTTTGAGTTCTGGTTCGGATGACGCCCCGAACCGGCCGGACCGGACCCATGACAATGCAAAGTCATGCCAAAATGACGACTCGAACCGTACAGTTTCGGTAGTGGACGAGCGGAAGAGGAGGCGGATGATATCGAACCGGGAGTCGGCCAGGCGGTCACGGATGCGAAAACAAAAGCACATAGAAAACCTAAGGAACCAGGTGAACCGGCTTAGGGTTGAGAACCGGGAACTGAACAACCGGTTGAGGATCGTTTTGTACCATTTTCAGCTCGTACGGACAGACAACGATAGGCTCCGATCCGACCACGTTATGCTCCTGCAGAAATTGTCCGACATACGTCGAATTCTGGTTTTCCGGCAGCACTTGTCTTCTGCATGGCCATGCGATACCATTATTCCACAACAAACCCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
bZIP_1 bZIP_2

Protein Analysis

201

Amino Acids

22.97

Weight (kDa)

10.3

Isoelectric Point (pI)

68.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 98 - 144 1.1e-06 Basic region leucine zipper
bZIP_1 PF00170 100 - 144 1.4e-10 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015240)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G49760
malus_domestica MD02G1189300.v1.1 MD15G1300200.v1.1
prunus_persica Prupe.6G217300_v2.0.a1
pyrus_communis pycom02g15350 pycom15g26280
rosa_chinensis RchiOBHm_Chr2g0108691
rosa_laevigata RLG00000017685
rosa_multiflora Rmu_co8051662.1_g000001
rosa_roxburghii Rroxscaffold_2G00134910
rosa_rugosa Rorug02G0155200
rosa_samantha Rh2AG204900 Rh2BG216800 Rh2CG208000 Rh2DG211200
rosa_wichuraiana Rw2G016320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 298
AciI CCGC 4 cut(s) 81, 298, 310, 340
AclWI GGATC 2 cut(s) 443, 480
AcoI YGGCCR 3 cut(s) 221, 333, 566
AcsI RAATTY 1 cut(s) 531
AcyI GRCGYC 1 cut(s) 210
AdeI CACNNNGTG 1 cut(s) 93
AfaI GTAC 3 cut(s) 277, 446, 462
AfiI CCNNNNNNNGG 3 cut(s) 219, 331, 400
AgeI ACCGGT 1 cut(s) 426
AjnI CCWGG 2 cut(s) 335, 384
AluBI AGCT 1 cut(s) 457
AluI AGCT 1 cut(s) 457
Alw26I GTCTC 1 cut(s) 177
AlwI GGATC 2 cut(s) 443, 480
AoxI GGCC 3 cut(s) 221, 333, 566
ApeKI GCWGC 1 cut(s) 547
ApoI RAATTY 1 cut(s) 531
ArsI GACNNNNNNTTYG 2 cut(s) 314, 346
AsiGI ACCGGT 1 cut(s) 426
AspS9I GGNCC 2 cut(s) 226, 231
AsuC2I CCSGG 3 cut(s) 78, 326, 413
AsuHPI GGTGA 3 cut(s) 79, 120, 400
AvaII GGWCC 2 cut(s) 226, 231
AxyI CCTNAGG 1 cut(s) 377
BalI TGGCCA 1 cut(s) 568
BbsI GAAGAC 1 cut(s) 549
BbvI GCAGC 1 cut(s) 559
BccI CCATC 1 cut(s) 133
BciT130I CCWGG 2 cut(s) 337, 386
BcnI CCSGG 3 cut(s) 78, 326, 413
BcoDI GTCTC 1 cut(s) 177
BfmI CTRYAG 1 cut(s) 506
BisI GCNGC 1 cut(s) 548
BlsI GCNGC 1 cut(s) 549
Bme1390I CCNGG 5 cut(s) 78, 326, 337, 386, 413
Bme18I GGWCC 2 cut(s) 226, 231
BmgT120I GGNCC 2 cut(s) 226, 231
BmiI GGNNCC 3 cut(s) 233, 383, 482
BmrFI CCNGG 5 cut(s) 78, 326, 337, 386, 413
BmsI GCATC 1 cut(s) 339
BoxI GACNNNNGTC 1 cut(s) 525
BpiI GAAGAC 1 cut(s) 549
Bpu10I CCTNAGC 1 cut(s) 398
BpuMI CCSGG 3 cut(s) 78, 326, 413
BsaHI GRCGYC 1 cut(s) 210
BsaJI CCNNGG 2 cut(s) 76, 92
BsaWI WCCGGW 2 cut(s) 228, 426
Bsc4I CCNNNNNNNGG 3 cut(s) 219, 331, 400
Bse118I RCCGGY 3 cut(s) 219, 393, 426
Bse21I CCTNAGG 1 cut(s) 377
BseBI CCWGG 2 cut(s) 337, 386
BseDI CCNNGG 2 cut(s) 76, 92
BseGI GGATG 3 cut(s) 211, 318, 354
BseLI CCNNNNNNNGG 3 cut(s) 219, 331, 400
BseRI GAGGAG 2 cut(s) 32, 319
BseX3I CGGCCG 1 cut(s) 221
BseXI GCAGC 1 cut(s) 559
Bsh1285I CGRYCG 1 cut(s) 224
BshFI GGCC 3 cut(s) 223, 335, 568
BshTI ACCGGT 1 cut(s) 426
BsiEI CGRYCG 1 cut(s) 224
BsiWI CGTACG 1 cut(s) 460
BslI CCNNNNNNNGG 3 cut(s) 219, 331, 400
BsmAI GTCTC 1 cut(s) 177
BsnI GGCC 3 cut(s) 223, 335, 568
Bsp143I GATC 3 cut(s) 141, 435, 485
BspACI CCGC 4 cut(s) 81, 298, 310, 340
BspANI GGCC 3 cut(s) 223, 335, 568
BspLI GGNNCC 3 cut(s) 233, 383, 482
BspMAI CTGCAG 1 cut(s) 510
BspPI GGATC 2 cut(s) 443, 480
BsrBI CCGCTC 1 cut(s) 298
BsrFI RCCGGY 3 cut(s) 219, 393, 426
BssAI RCCGGY 3 cut(s) 219, 393, 426
BssECI CCNNGG 2 cut(s) 76, 92
BssMI GATC 3 cut(s) 141, 435, 485
BssNI GRCGYC 1 cut(s) 210
Bst2UI CCWGG 2 cut(s) 337, 386
Bst4CI ACNGT 3 cut(s) 184, 275, 280
Bst6I CTCTTC 1 cut(s) 296
BstACI GRCGYC 1 cut(s) 210
BstDEI CTNAG 2 cut(s) 377, 398
BstDSI CCRYGG 1 cut(s) 92
BstF5I GGATG 3 cut(s) 211, 318, 354
BstKTI GATC 3 cut(s) 144, 438, 488
BstMAI GTCTC 1 cut(s) 177
BstMBI GATC 3 cut(s) 141, 435, 485
BstMCI CGRYCG 1 cut(s) 224
BstMWI GCNNNNNNNGC 1 cut(s) 17
BstNI CCWGG 2 cut(s) 337, 386
BstPAI GACNNNNGTC 1 cut(s) 525
BstSCI CCNGG 5 cut(s) 76, 324, 335, 384, 411
BstSFI CTRYAG 1 cut(s) 506
BstV1I GCAGC 1 cut(s) 559
BstV2I GAAGAC 1 cut(s) 549
BstZI CGGCCG 1 cut(s) 221
Bsu36I CCTNAGG 1 cut(s) 377
BsuRI GGCC 3 cut(s) 223, 335, 568
BtgI CCRYGG 1 cut(s) 92
BtsCI GGATG 3 cut(s) 211, 318, 354
Cfr10I RCCGGY 3 cut(s) 219, 393, 426
Cfr13I GGNCC 2 cut(s) 226, 231
CpoI CGGWCCG 1 cut(s) 226
CseI GACGC 1 cut(s) 218
CsiI ACCWGGT 1 cut(s) 384
Csp6I GTAC 3 cut(s) 276, 445, 461
CspAI ACCGGT 1 cut(s) 426
CspI CGGWCCG 1 cut(s) 226
CviAII CATG 5 cut(s) 22, 236, 252, 564, 570
CviJI RGCY 8 cut(s) 20, 69, 223, 335, 397, 457, 481, 568
CviKI_1 RGCY 8 cut(s) 20, 69, 223, 335, 397, 457, 481, 568
CviQI GTAC 3 cut(s) 276, 445, 461
DdeI CTNAG 2 cut(s) 377, 398
DpnI GATC 3 cut(s) 143, 437, 487
DpnII GATC 3 cut(s) 141, 435, 485
DraIII CACNNNGTG 1 cut(s) 93
EaeI YGGCCR 3 cut(s) 221, 333, 566
EagI CGGCCG 1 cut(s) 221
Eam1104I CTCTTC 1 cut(s) 296
EarI CTCTTC 1 cut(s) 296
EciI GGCGGA 1 cut(s) 325
EclXI CGGCCG 1 cut(s) 221
Eco32I GATATC 1 cut(s) 318
Eco47I GGWCC 2 cut(s) 226, 231
Eco52I CGGCCG 1 cut(s) 221
Eco81I CCTNAGG 1 cut(s) 377
EcoRI GAATTC 1 cut(s) 531
EcoRII CCWGG 2 cut(s) 335, 384
EcoRV GATATC 1 cut(s) 318
FaeI CATG 5 cut(s) 25, 239, 255, 567, 573
FaiI YATR 9 cut(s) 23, 237, 253, 368, 500, 524, 565, 571, 601
FatI CATG 5 cut(s) 21, 235, 251, 563, 569
Fnu4HI GCNGC 1 cut(s) 548
FokI GGATG 3 cut(s) 218, 325, 361
Fsp4HI GCNGC 1 cut(s) 548
GluI GCNGC 1 cut(s) 548
HaeIII GGCC 3 cut(s) 223, 335, 568
HgaI GACGC 1 cut(s) 218
Hin1I GRCGYC 1 cut(s) 210
Hin1II CATG 5 cut(s) 25, 239, 255, 567, 573
HinfI GANTC 3 cut(s) 35, 266, 329
HphI GGTGA 3 cut(s) 79, 120, 400
Hpy166II GTNNAC 2 cut(s) 292, 391
Hpy188I TCNGA 6 cut(s) 34, 106, 205, 485, 490, 520
Hpy8I GTNNAC 2 cut(s) 292, 391
Hpy99I CGWCG 2 cut(s) 65, 531
HpyCH4III ACNGT 3 cut(s) 184, 275, 280
HpyCH4IV ACGT 2 cut(s) 495, 526
HpyCH4V TGCA 3 cut(s) 245, 508, 563
HpyF10VI GCNNNNNNNGC 1 cut(s) 17
HpyF3I CTNAG 2 cut(s) 377, 398
HpySE526I ACGT 2 cut(s) 495, 526
Hsp92I GRCGYC 1 cut(s) 210
Hsp92II CATG 5 cut(s) 25, 239, 255, 567, 573
Kzo9I GATC 3 cut(s) 141, 435, 485
LmnI GCTCC 3 cut(s) 106, 486, 507
Lsp1109I GCAGC 1 cut(s) 559
LweI GCATC 1 cut(s) 339
MabI ACCWGGT 1 cut(s) 384
MaeII ACGT 2 cut(s) 495, 526
MaeIII GTNAC 1 cut(s) 342
MalI GATC 3 cut(s) 143, 437, 487
MbiI CCGCTC 1 cut(s) 298
MboI GATC 3 cut(s) 141, 435, 485
MboII GAAGA 2 cut(s) 313, 549
MlsI TGGCCA 1 cut(s) 568
MluCI AATT 3 cut(s) 186, 512, 531
MluNI TGGCCA 1 cut(s) 568
MlyI GAGTC 3 cut(s) 29, 260, 338
MmeI TCCRAC 2 cut(s) 513, 543
MnlI CCTC 6 cut(s) 40, 50, 53, 297, 300, 426
Mox20I TGGCCA 1 cut(s) 568
MscI TGGCCA 1 cut(s) 568
MslI CAYNNNNRTG 2 cut(s) 240, 568
Msp20I TGGCCA 1 cut(s) 568
MspR9I CCNGG 5 cut(s) 78, 326, 337, 386, 413
MvaI CCWGG 2 cut(s) 337, 386
MwoI GCNNNNNNNGC 1 cut(s) 17
NciI CCSGG 3 cut(s) 78, 326, 413
NdeII GATC 3 cut(s) 141, 435, 485
NlaIII CATG 5 cut(s) 25, 239, 255, 567, 573
NlaIV GGNNCC 3 cut(s) 233, 383, 482
NmuCI GTSAC 1 cut(s) 342
Pfl23II CGTACG 1 cut(s) 460
PinAI ACCGGT 1 cut(s) 426
PkrI GCNGC 1 cut(s) 549
PleI GAGTC 3 cut(s) 29, 260, 337
PpsI GAGTC 3 cut(s) 29, 260, 337
PshAI GACNNNNGTC 1 cut(s) 525
Psp6I CCWGG 2 cut(s) 335, 384
PspGI CCWGG 2 cut(s) 335, 384
PspLI CGTACG 1 cut(s) 460
PspN4I GGNNCC 3 cut(s) 233, 383, 482
PspPI GGNCC 2 cut(s) 226, 231
PstI CTGCAG 1 cut(s) 510
RsaI GTAC 3 cut(s) 277, 446, 462
RsaNI GTAC 3 cut(s) 276, 445, 461
RseI CAYNNNNRTG 2 cut(s) 240, 568
Rsr2I CGGWCCG 1 cut(s) 226
RsrII CGGWCCG 1 cut(s) 226
SatI GCNGC 1 cut(s) 548
Sau3AI GATC 3 cut(s) 141, 435, 485
Sau96I GGNCC 2 cut(s) 226, 231
SchI GAGTC 3 cut(s) 29, 260, 338
ScrFI CCNGG 5 cut(s) 78, 326, 337, 386, 413
SetI ASST 5 cut(s) 378, 390, 459, 498, 529
SexAI ACCWGGT 1 cut(s) 384
SfaNI GCATC 1 cut(s) 339
SfcI CTRYAG 1 cut(s) 506
SinI GGWCC 2 cut(s) 226, 231
SmiMI CAYNNNNRTG 2 cut(s) 240, 568
Sse9I AATT 3 cut(s) 186, 512, 531
SsiI CCGC 4 cut(s) 81, 298, 310, 340
StyD4I CCNGG 5 cut(s) 76, 324, 335, 384, 411
TaaI ACNGT 3 cut(s) 184, 275, 280
TaiI ACGT 2 cut(s) 498, 529
TaqI TCGA 4 cut(s) 60, 269, 320, 529
TasI AATT 3 cut(s) 186, 512, 531
TseFI GTSAC 1 cut(s) 342
TseI GCWGC 1 cut(s) 547
Tsp45I GTSAC 1 cut(s) 342
TspDTI ATGAA 1 cut(s) 147
TspGWI ACGGA 2 cut(s) 361, 478
VpaK11BI GGWCC 2 cut(s) 226, 231
XapI RAATTY 1 cut(s) 531
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.