Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0007941

Physical Location & Seq

Genomic Coordinates Forward (+)

33327165 .. 33329584

Gene Structure 2420 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1277500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGCCAGAGCTCCGTCGTCAATCCTAAGCTTCCTCCGCCACAACCACCGTGCCCGGCAAAACCCAAATACCCAAATCAGATACCTCACAACCGAAACCAAAGATTCTGACTTTACAGAAATTTCTCAACAGATTTGTAAGATTATTAGAACAAAACCCAGATGGGAGCAGACTCTGCCATCTGATTACCCTTCTTTTAATTTCACTGACCCCCAATTTTTCACTGAGCTTTTGAAGCACCAAAGGAATGTGTTTTTCTCGCTTCGGTTTTTCTTCTGGTTGAGCTCTCAGAATGGGTTTTCGCCCAACCCCGTTTCATTTAATGCGCTTTTCACTGCGCTCGTGGAGGCTAAGGCCTGCAATGCTGCAAAATTGCTTCTTGGACATACCGGTTTTAGCCCTGATCCTGCTTCATTAGAAAGTTATATTGGGTGTCTTTGCGAGGGTGGGTATGTTCAGGAGGCGGCTGATGTGTTTTATAGGCTGAAAGGGGCTGGAGTGTGCCTGTCTATAATGACTTGGAATGCGGCTTTGTCAGGTTGCCTTAAAGTGGGGAGGACTGATATTATTTGGATATTGTATCAAGAAATGATAGAATGTGGTGTTGTAGCTGATGTTGAGACTGTTGGGTATCTCATTCAAGCATTATGTGTTGATAACAATGTTTTGAAAGGATATGAGCTTCTTCGGCAGGTTTTGGTAGATGGACTAGTCCCTGGAAATGCTGCTTTCAATAAATTGATTTCTGGGTTTTGTAAGGTGAAGAATTATAATCGAGTGTCCGAACTCCTCCACATCATGATTTCAAAGAACCGTGACCCGGATAATTATACGTATCAGGAGGTAATCAATTGGCTGTGTAAGAAAGGAAAGGGGCGTGAGGGTTTACGGGTTTTCAATGATCTTAAGGATAGGGGCTATGCCCCAGATATTGTCATGTATACTACCATGATTCATGGTCTTTGCACAATGGATTATATTGGGGAAGCTAGGAAGCTGTGGTTTGAGATGATTGAGAAGGGATATCGTCCAAATGAGTACACATACAATACAATGATTCTGGGGTTCTGTAAGATTGGTAGTTTTGAAGAGGCCAAGATCTTATACAAGGAGATGTGTGATAGAGGTTATAAAGAAACCACAGTCAGTTACAACGCAATGATGAGAGGACTATGTTTACATGGAAGGACCGATGAGGCATATGGATTATTCACTGAAATGCCCCATAAGGGTATTGTTCGTGATTTGATTACATACAACACTCTAATCCAAGGTTTCTGTAAGGAAGGCAAGATAGTAGAAAGTACGAACTTATTCCGAGAGCTCCTGACTCAAGGCTTACAACCATCAACTTACTCCTACACCCCACTTATTGAAAAGCTTTGTCAGGTTGGAGCTGTACAAGAAGCGAAAAGTTTGTGGAATGATATGAAGAATAGAGGTTTGGAACCAACTTTCGGCACTCAAGATTATATCATCATTGGATTGTGTGATCAAGGAGATGCTGCAGAGGGAATGGAATGGTTCTTAGACATGTTAAAGAGTAAGCTTAAACCAAAGCGGAAAACTTTTGGGAAACTAGTTGAATGTCTTTCACAAAGAGACAGGTTGGATGATTCTTTACTTGTTTTAGACTTTATGTTTAGGGCAGGTTATACACTGGAAGAACACATATGTTATTCTCTGGTCAATAAGCTTGGCAGGGAGAACAACCATTTCGTTGAAACATGTCTAGGGGAGATCTTAGAAGGAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

586

Amino Acids

66.82

Weight (kDa)

6.58

Isoelectric Point (pI)

31.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	170 - 217	7.4e-08	PPR repeat family
PPR_2	PF13041	240 - 283	6.8e-08	PPR repeat family
PPR_2	PF13041	282 - 322	4.3e-11	PPR repeat family
PPR_3	PF13812	297 - 353	5.6e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	305 - 337	9.7e-07	PPR repeat
PPR_2	PF13041	309 - 358	3.9e-16	PPR repeat family
PPR	PF01535	312 - 341	5.8e-06	PPR repeat
PPR_1	PF12854	340 - 372	1.8e-08	PPR repeat
PPR	PF01535	347 - 376	9.6e-08	PPR repeat
PPR_2	PF13041	348 - 392	1.3e-11	PPR repeat family
PPR_1	PF12854	376 - 407	6.5e-08	PPR repeat
PPR_2	PF13041	380 - 419	2.4e-09	PPR repeat family
PPR	PF01535	382 - 412	3.8e-08	PPR repeat
PPR_1	PF12854	410 - 441	3.2e-10	PPR repeat
PPR_2	PF13041	415 - 463	3.1e-12	PPR repeat family
PPR	PF01535	417 - 446	2.9e-06	PPR repeat
PPR_3	PF13812	438 - 493	5.6e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	452 - 497	3e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007941)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18950
fragaria_vesca	FvH4_4g14110 FvH4_4g14110
malus_domestica	MD02G1277500.v1.1
prunus_persica	Prupe.1G570100_v2.0.a1 Prupe.3G113000_v2.0.a1 Prupe.3G113000_v2.0.a1
pyrus_communis	pycom12g09540
rosa_chinensis	RchiOBHm_Chr4g0419111 RchiOBHm_Chr4g0419121
rosa_laevigata	RLG00000007826
rosa_multiflora	Rmu_sc0000913.1_g000015 Rmu_sc0011831.1_g000001
rosa_roxburghii	Rroxscaffold_5G00362180
rosa_rugosa	Rorug04G0157100
rosa_samantha	Rh4AG218700 Rh4AG218800 Rh4BG220200 Rh4BG220300 Rh4CG230900 Rh4CG231000 Rh4DG217700 Rh4DG217800
rosa_wichuraiana	Rw4G018690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	771, 1131
Acc36I	ACCTGC	2 cut(s)	682, 1640
AccI	GTMKAC	1 cut(s)	941
AciI	CCGC	4 cut(s)	37, 464, 527, 1561
AclWI	GGATC	1 cut(s)	398
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	1 cut(s)	120
AfaI	GTAC	3 cut(s)	1040, 1306, 1401
AfiI	CCNNNNNNNGG	4 cut(s)	550, 820, 1229, 1457
AflII	CTTAAG	1 cut(s)	905
AflIII	ACRYGT	2 cut(s)	1533, 1727
AgeI	ACCGGT	1 cut(s)	389
AhlI	ACTAGT	2 cut(s)	709, 1579
AjnI	CCWGG	1 cut(s)	715
AjuI	GAANNNNNNNTTGG	4 cut(s)	411, 443, 1427, 1459
Alw21I	GWGCWC	3 cut(s)	13, 287, 1326
Alw26I	GTCTC	2 cut(s)	614, 1596
AlwI	GGATC	1 cut(s)	398
AlwNI	CAGNNNCTG	1 cut(s)	175
AoxI	GGCC	3 cut(s)	3, 354, 1092
ApeKI	GCWGC	3 cut(s)	365, 725, 1505
ApoI	RAATTY	1 cut(s)	120
AsiGI	ACCGGT	1 cut(s)	389
Asp700I	GAANNNNTTC	1 cut(s)	1313
AspLEI	GCGC	2 cut(s)	328, 340
AspS9I	GGNCC	1 cut(s)	1188
AsuC2I	CCSGG	2 cut(s)	55, 821
AsuHPI	GGTGA	1 cut(s)	772
AvaII	GGWCC	1 cut(s)	1188
BaeGI	GKGCMC	1 cut(s)	55
BalI	TGGCCA	1 cut(s)	5
BanII	GRGCYC	3 cut(s)	13, 287, 1326
BauI	CACGAG	1 cut(s)	341
Bbv12I	GWGCWC	3 cut(s)	13, 287, 1326
BbvI	GCAGC	3 cut(s)	352, 712, 1492
BccI	CCATC	4 cut(s)	156, 187, 698, 1354
BciT130I	CCWGG	1 cut(s)	717
BclI	TGATCA	1 cut(s)	1492
BcnI	CCSGG	2 cut(s)	55, 821
BcoDI	GTCTC	2 cut(s)	614, 1596
BcuI	ACTAGT	2 cut(s)	709, 1579
BfaI	CTAG	4 cut(s)	710, 990, 1580, 1733
BfmI	CTRYAG	1 cut(s)	1506
BfrI	CTTAAG	1 cut(s)	905
BfuAI	ACCTGC	2 cut(s)	682, 1640
BglII	AGATCT	2 cut(s)	1098, 1740
BisI	GCNGC	5 cut(s)	366, 465, 528, 726, 1506
BlsI	GCNGC	5 cut(s)	367, 466, 529, 727, 1507
Bme1390I	CCNGG	3 cut(s)	55, 717, 821
Bme18I	GGWCC	1 cut(s)	1188
BmgT120I	GGNCC	1 cut(s)	1188
BmiI	GGNNCC	1 cut(s)	1449
BmrFI	CCNGG	3 cut(s)	55, 717, 821
BmsI	GCATC	1 cut(s)	1492
BpmI	CTGGAG	1 cut(s)	516
Bpu10I	CCTNAGC	2 cut(s)	26, 351
BpuEI	CTTGAG	2 cut(s)	1317, 1449
BpuMI	CCSGG	2 cut(s)	55, 821
BsaAI	YACGTR	1 cut(s)	834
BsaJI	CCNNGG	2 cut(s)	715, 1270
BsaWI	WCCGGW	1 cut(s)	389
Bsc4I	CCNNNNNNNGG	4 cut(s)	550, 820, 1229, 1457
Bse118I	RCCGGY	1 cut(s)	389
Bse1I	ACTGG	1 cut(s)	1665
Bse3DI	GCAATG	2 cut(s)	367, 1164
BseBI	CCWGG	1 cut(s)	717
BseDI	CCNNGG	2 cut(s)	715, 1270
BseGI	GGATG	1 cut(s)	1618
BseLI	CCNNNNNNNGG	4 cut(s)	550, 820, 1229, 1457
BseMI	GCAATG	2 cut(s)	367, 1164
BseMII	CTCAG	2 cut(s)	216, 302
BseNI	ACTGG	1 cut(s)	1665
BseRI	GAGGAG	1 cut(s)	779
BseSI	GKGCMC	1 cut(s)	55
BseXI	GCAGC	3 cut(s)	352, 712, 1492
BshFI	GGCC	3 cut(s)	5, 356, 1094
BshTI	ACCGGT	1 cut(s)	389
BsiHKAI	GWGCWC	3 cut(s)	13, 287, 1326
BsiSI	CCGG	3 cut(s)	55, 390, 821
BslFI	GGGAC	1 cut(s)	698
BslI	CCNNNNNNNGG	4 cut(s)	550, 820, 1229, 1457
BsmAI	GTCTC	2 cut(s)	614, 1596
BsmFI	GGGAC	1 cut(s)	698
BsmI	GAATGC	1 cut(s)	529
BsnI	GGCC	3 cut(s)	5, 356, 1094
Bsp1286I	GDGCHC	4 cut(s)	13, 55, 287, 1326
Bsp1407I	TGTACA	1 cut(s)	1399
Bsp143I	GATC	5 cut(s)	403, 901, 1098, 1492, 1740
BspACI	CCGC	4 cut(s)	37, 464, 527, 1561
BspANI	GGCC	3 cut(s)	5, 356, 1094
BspCNI	CTCAG	2 cut(s)	217, 301
BspHI	TCATGA	1 cut(s)	798
BspLI	GGNNCC	1 cut(s)	1449
BspMAI	CTGCAG	1 cut(s)	1510
BspMI	ACCTGC	2 cut(s)	682, 1640
BspPI	GGATC	1 cut(s)	398
BspTI	CTTAAG	1 cut(s)	905
BsrDI	GCAATG	2 cut(s)	367, 1164
BsrFI	RCCGGY	1 cut(s)	389
BsrGI	TGTACA	1 cut(s)	1399
BsrI	ACTGG	1 cut(s)	1665
BssAI	RCCGGY	1 cut(s)	389
BssECI	CCNNGG	2 cut(s)	715, 1270
BssMI	GATC	5 cut(s)	403, 901, 1098, 1492, 1740
BssNAI	GTATAC	1 cut(s)	942
BssSI	CACGAG	1 cut(s)	341
BssT1I	CCWWGG	1 cut(s)	1270
Bst1107I	GTATAC	1 cut(s)	942
Bst2BI	CACGAG	1 cut(s)	341
Bst2UI	CCWGG	1 cut(s)	717
Bst4CI	ACNGT	4 cut(s)	50, 625, 815, 1144
Bst6I	CTCTTC	1 cut(s)	1083
BstAFI	CTTAAG	1 cut(s)	905
BstAPI	GCANNNNNTGC	1 cut(s)	175
BstAUI	TGTACA	1 cut(s)	1399
BstBAI	YACGTR	1 cut(s)	834
BstC8I	GCNNGC	1 cut(s)	358
BstDEI	CTNAG	6 cut(s)	26, 225, 288, 351, 1528, 1744
BstF5I	GGATG	1 cut(s)	1618
BstHHI	GCGC	2 cut(s)	328, 340
BstKTI	GATC	5 cut(s)	406, 904, 1101, 1495, 1743
BstMAI	GTCTC	2 cut(s)	614, 1596
BstMBI	GATC	5 cut(s)	403, 901, 1098, 1492, 1740
BstMWI	GCNNNNNNNGC	5 cut(s)	36, 175, 235, 362, 688
BstNI	CCWGG	1 cut(s)	717
BstNSI	RCATGY	2 cut(s)	1537, 1731
BstSCI	CCNGG	3 cut(s)	53, 715, 819
BstSFI	CTRYAG	1 cut(s)	1506
BstSLI	GKGCMC	1 cut(s)	55
BstSNI	TACGTA	1 cut(s)	834
BstV1I	GCAGC	3 cut(s)	352, 712, 1492
BstX2I	RGATCY	2 cut(s)	1098, 1740
BstYI	RGATCY	2 cut(s)	1098, 1740
BstZ17I	GTATAC	1 cut(s)	942
BsuRI	GGCC	3 cut(s)	5, 356, 1094
BtsCI	GGATG	1 cut(s)	1618
BtsI	GCAGTG	1 cut(s)	333
BtsIMutI	CAGTG	5 cut(s)	204, 222, 333, 1212, 1658
BveI	ACCTGC	2 cut(s)	682, 1640
Cac8I	GCNNGC	1 cut(s)	358
CaiI	CAGNNNCTG	1 cut(s)	175
CciI	TCATGA	1 cut(s)	798
CfoI	GCGC	2 cut(s)	328, 340
Cfr10I	RCCGGY	1 cut(s)	389
Cfr13I	GGNCC	1 cut(s)	1188
Csp6I	GTAC	3 cut(s)	1039, 1305, 1400
CspAI	ACCGGT	1 cut(s)	389
CviAII	CATG	7 cut(s)	799, 937, 949, 956, 1181, 1534, 1728
CviQI	GTAC	3 cut(s)	1039, 1305, 1400
DdeI	CTNAG	6 cut(s)	26, 225, 288, 351, 1528, 1744
DpnI	GATC	5 cut(s)	405, 903, 1100, 1494, 1742
DpnII	GATC	5 cut(s)	403, 901, 1098, 1492, 1740
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	1083
EarI	CTCTTC	1 cut(s)	1083
EciI	GGCGGA	1 cut(s)	26
Ecl136II	GAGCTC	3 cut(s)	11, 285, 1324
Eco105I	TACGTA	1 cut(s)	834
Eco130I	CCWWGG	1 cut(s)	1270
Eco147I	AGGCCT	1 cut(s)	356
Eco24I	GRGCYC	3 cut(s)	13, 287, 1326
Eco32I	GATATC	1 cut(s)	1025
Eco47I	GGWCC	1 cut(s)	1188
Eco53kI	GAGCTC	3 cut(s)	11, 285, 1324
EcoICRI	GAGCTC	3 cut(s)	11, 285, 1324
EcoRII	CCWGG	1 cut(s)	715
EcoRV	GATATC	1 cut(s)	1025
EcoT14I	CCWWGG	1 cut(s)	1270
EcoT38I	GRGCYC	3 cut(s)	13, 287, 1326
ErhI	CCWWGG	1 cut(s)	1270
FaeI	CATG	7 cut(s)	802, 940, 952, 959, 1184, 1537, 1731
FaqI	GGGAC	1 cut(s)	698
FatI	CATG	7 cut(s)	798, 936, 948, 955, 1180, 1533, 1727
FauNDI	CATATG	2 cut(s)	1201, 1673
FbaI	TGATCA	1 cut(s)	1492
FblI	GTMKAC	1 cut(s)	941
Fnu4HI	GCNGC	5 cut(s)	366, 465, 528, 726, 1506
FokI	GGATG	1 cut(s)	1625
FriOI	GRGCYC	3 cut(s)	13, 287, 1326
Fsp4HI	GCNGC	5 cut(s)	366, 465, 528, 726, 1506
FspBI	CTAG	4 cut(s)	710, 990, 1580, 1733
GlaI	GCGC	2 cut(s)	327, 339
GluI	GCNGC	5 cut(s)	366, 465, 528, 726, 1506
GsuI	CTGGAG	1 cut(s)	516
HaeIII	GGCC	3 cut(s)	5, 356, 1094
HapII	CCGG	3 cut(s)	55, 390, 821
HhaI	GCGC	2 cut(s)	328, 340
Hin1II	CATG	7 cut(s)	802, 940, 952, 959, 1184, 1537, 1731
Hin6I	GCGC	2 cut(s)	326, 338
HinP1I	GCGC	2 cut(s)	326, 338
HindIII	AAGCTT	4 cut(s)	28, 1379, 1547, 1694
HinfI	GANTC	6 cut(s)	104, 172, 952, 1057, 1330, 1616
HpaII	CCGG	3 cut(s)	55, 390, 821
HphI	GGTGA	1 cut(s)	772
Hpy166II	GTNNAC	4 cut(s)	887, 942, 1041, 1178
Hpy188I	TCNGA	6 cut(s)	80, 109, 184, 291, 784, 1319
Hpy188III	TCNNGA	7 cut(s)	458, 584, 799, 839, 1241, 1327, 1466
Hpy8I	GTNNAC	4 cut(s)	887, 942, 1041, 1178
Hpy99I	CGWCG	1 cut(s)	19
HpyAV	CCTTC	5 cut(s)	201, 1012, 1179, 1280, 1742
HpyCH4III	ACNGT	4 cut(s)	50, 625, 815, 1144
HpyCH4IV	ACGT	1 cut(s)	833
HpyCH4V	TGCA	4 cut(s)	360, 368, 966, 1508
HpyF10VI	GCNNNNNNNGC	5 cut(s)	36, 175, 235, 362, 688
HpyF3I	CTNAG	6 cut(s)	26, 225, 288, 351, 1528, 1744
HpySE526I	ACGT	1 cut(s)	833
Hsp92II	CATG	7 cut(s)	802, 940, 952, 959, 1184, 1537, 1731
HspAI	GCGC	2 cut(s)	326, 338
Ksp22I	TGATCA	1 cut(s)	1492
Kzo9I	GATC	5 cut(s)	403, 901, 1098, 1492, 1740
LmnI	GCTCC	4 cut(s)	16, 166, 1329, 1394
Lsp1109I	GCAGC	3 cut(s)	352, 712, 1492
LweI	GCATC	1 cut(s)	1492
MaeI	CTAG	4 cut(s)	710, 990, 1580, 1733
MaeII	ACGT	1 cut(s)	833
MaeIII	GTNAC	2 cut(s)	815, 1148
MalI	GATC	5 cut(s)	405, 903, 1100, 1494, 1742
MboI	GATC	5 cut(s)	403, 901, 1098, 1492, 1740
MboII	GAAGA	6 cut(s)	265, 677, 775, 1100, 1444, 1676
MfeI	CAATTG	1 cut(s)	850
MflI	RGATCY	2 cut(s)	1098, 1740
MhlI	GDGCHC	4 cut(s)	13, 55, 287, 1326
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	8 cut(s)	120, 199, 215, 371, 737, 766, 826, 850
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	166, 1324
MmeI	TCCRAC	2 cut(s)	1372, 1590
Mox20I	TGGCCA	1 cut(s)	5
MroXI	GAANNNNTTC	1 cut(s)	1313
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	6 cut(s)	198, 321, 546, 906, 1538, 1551
MslI	CAYNNNNRTG	1 cut(s)	1217
Msp20I	TGGCCA	1 cut(s)	5
MspCI	CTTAAG	1 cut(s)	905
MspI	CCGG	3 cut(s)	55, 390, 821
MspR9I	CCNGG	3 cut(s)	55, 717, 821
MunI	CAATTG	1 cut(s)	850
Mva1269I	GAATGC	1 cut(s)	529
MvaI	CCWGG	1 cut(s)	717
MwoI	GCNNNNNNNGC	5 cut(s)	36, 175, 235, 362, 688
NciI	CCSGG	2 cut(s)	55, 821
NdeI	CATATG	2 cut(s)	1201, 1673
NdeII	GATC	5 cut(s)	403, 901, 1098, 1492, 1740
NlaIII	CATG	7 cut(s)	802, 940, 952, 959, 1184, 1537, 1731
NlaIV	GGNNCC	1 cut(s)	1449
NmuCI	GTSAC	1 cut(s)	815
NspI	RCATGY	2 cut(s)	1537, 1731
PagI	TCATGA	1 cut(s)	798
PceI	AGGCCT	1 cut(s)	356
PciI	ACATGT	2 cut(s)	1533, 1727
PctI	GAATGC	1 cut(s)	529
PdmI	GAANNNNTTC	1 cut(s)	1313
PfeI	GAWTC	4 cut(s)	104, 952, 1057, 1616
PinAI	ACCGGT	1 cut(s)	389
PkrI	GCNGC	5 cut(s)	367, 466, 529, 727, 1507
PleI	GAGTC	2 cut(s)	166, 1324
PpsI	GAGTC	2 cut(s)	166, 1324
Ppu21I	YACGTR	1 cut(s)	834
PscI	ACATGT	2 cut(s)	1533, 1727
PsiI	TTATAA	2 cut(s)	771, 1131
Psp124BI	GAGCTC	3 cut(s)	13, 287, 1326
Psp6I	CCWGG	1 cut(s)	715
PspGI	CCWGG	1 cut(s)	715
PspN4I	GGNNCC	1 cut(s)	1449
PspPI	GGNCC	1 cut(s)	1188
PstI	CTGCAG	1 cut(s)	1510
PstNI	CAGNNNCTG	1 cut(s)	175
PsuI	RGATCY	2 cut(s)	1098, 1740
RsaI	GTAC	3 cut(s)	1040, 1306, 1401
RsaNI	GTAC	3 cut(s)	1039, 1305, 1400
RseI	CAYNNNNRTG	1 cut(s)	1217
SacI	GAGCTC	3 cut(s)	13, 287, 1326
SaqAI	TTAA	6 cut(s)	198, 321, 546, 906, 1538, 1551
SatI	GCNGC	5 cut(s)	366, 465, 528, 726, 1506
Sau3AI	GATC	5 cut(s)	403, 901, 1098, 1492, 1740
Sau96I	GGNCC	1 cut(s)	1188
SchI	GAGTC	2 cut(s)	166, 1324
ScrFI	CCNGG	3 cut(s)	55, 717, 821
SduI	GDGCHC	4 cut(s)	13, 55, 287, 1326
SfaNI	GCATC	1 cut(s)	1492
SfcI	CTRYAG	1 cut(s)	1506
SinI	GGWCC	1 cut(s)	1188
SmiMI	CAYNNNNRTG	1 cut(s)	1217
SmlI	CTYRAG	3 cut(s)	905, 1332, 1464
SmoI	CTYRAG	3 cut(s)	905, 1332, 1464
SnaBI	TACGTA	1 cut(s)	834
SpeI	ACTAGT	2 cut(s)	709, 1579
Sse9I	AATT	8 cut(s)	120, 199, 215, 371, 737, 766, 826, 850
SseBI	AGGCCT	1 cut(s)	356
SsiI	CCGC	4 cut(s)	37, 464, 527, 1561
SspMI	CTAG	4 cut(s)	710, 990, 1580, 1733
SstI	GAGCTC	3 cut(s)	13, 287, 1326
StuI	AGGCCT	1 cut(s)	356
StyD4I	CCNGG	3 cut(s)	53, 715, 819
StyI	CCWWGG	1 cut(s)	1270
TaaI	ACNGT	4 cut(s)	50, 625, 815, 1144
TaiI	ACGT	1 cut(s)	836
TaqI	TCGA	1 cut(s)	775
TaqII	GACCGA	1 cut(s)	1205
TasI	AATT	8 cut(s)	120, 199, 215, 371, 737, 766, 826, 850
TatI	WGTACW	2 cut(s)	1038, 1399
TauI	GCSGC	2 cut(s)	467, 530
TfiI	GAWTC	4 cut(s)	104, 952, 1057, 1616
Tru1I	TTAA	6 cut(s)	198, 321, 546, 906, 1538, 1551
Tru9I	TTAA	6 cut(s)	198, 321, 546, 906, 1538, 1551
TscAI	CASTG	5 cut(s)	211, 229, 340, 1219, 1665
TseFI	GTSAC	1 cut(s)	815
TseI	GCWGC	3 cut(s)	365, 725, 1505
Tsp45I	GTSAC	1 cut(s)	815
TspDTI	ATGAA	4 cut(s)	306, 402, 944, 1445
TspRI	CASTG	5 cut(s)	211, 229, 340, 1219, 1665
Vha464I	CTTAAG	1 cut(s)	905
VpaK11BI	GGWCC	1 cut(s)	1188
XapI	RAATTY	1 cut(s)	120
XceI	RCATGY	2 cut(s)	1537, 1731
XmiI	GTMKAC	1 cut(s)	941
XmnI	GAANNNNTTC	1 cut(s)	1313
XspI	CTAG	4 cut(s)	710, 990, 1580, 1733

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.