Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0012510

Physical Location & Seq

Genomic Coordinates Reverse (-)

9921065 .. 9924340

Gene Structure 3276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1112800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1263 bp

ATGAACAACGGCGAACAAAGACGCCTAAACGGAGAAGCTGAGGAAGACGAAGACGACGACGACGCAAACAATGGTGGCCTTGCTGCCTGGGAGCGAGCTTACGCCGACGAGAGGTCGTGGGAGTCTCTGCAGGAGGACGAGTCCGGACTTCTCCAGCCCATTGACAACCAGTCCCTCAAACATGCCCAATACCGCCGCCGCCTTCGCGCCGCCTCCACTGCCCGAATCCAAAAGGGTCTCATTCGTTATCTTTTCATTGTTATCGACCTCTCTAAGGCAGCTGCAGAAATGGATTTTCGACCAAGCCGAATGGGGGTCGTTGCGAAACATATTGAGGCTTTCATAAGAGAGTTTTTCTACCAGAATCCGCTTAGTCAAGTTGGCCTGGTGACTGTAAAAGATGGTGTTGCTCATTGCTTGACGGATCTTGGTGGCAGTCCCGAGTCTCATGTTAAAGCTTTGATGGGTAAACTGGAATGCTCTGGTGACTCGTCCCTACAGAACGCATTGGATCTTGTACATGGGTATCTTAATCAGATTCCATCATATGGTCATAGAGAAGTATTGATCTTATATTCAGCTCTCAGTACCTGTGATCCTGGAGATATAATGGAAACTATCCAGAAGTGTAAGAAATCCAAAATTAGGTGCTCAGTTATCGGTCTCTCAGCAGAAATTTTCATATGCAAACATCTATGCCAAGAAACCGGTGGCTTGTACTATATTGCATTGGATGAGGCACACTTAAAAGAGTTGATATTGGAACATGCACCTCCACCTCCAGCAATAGCAGAATTTGCAATTGCTAACTTGATAAAGATGGGCTTCCCACAAAGAGCAGCAGAGGGCTCTGTGGCCATTTGTTCATGTCACAAGGAGGCAAAGGTAGGAGCTGGATACACTTGTCCTAGGTGCAAGGCTCGTGTTTGTGAGCTACCTACAGAATGTCGCATTTGTGGGCTGACACTCATTTCTTCCCCTCATTTAGCAAGGTCTTATCATCATCTCTTTCCCATTGTACCTTTTGACGAGGTCCCTCTGTCACTACTAATTGATCAACAAAACAAGTTTCCTAGAGCTTGTTTCGGCTGCCAACAAAATCTTCTCGGTCCTGGAAACAAGCCCGGCCTTCGGGTCGCTTGCCCAAAATGCAAACAGCACTTCTGCCTTGAATGCGACATATATATTCATGAAAGCTTGCATAACTGCCCAGGTTGTGAGAGCACTAGGCATTCCAGGATTCCAAATATAAATGAAGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0003674 GO:0003676 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005675 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0016070 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032774 GO:0032806 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902494 GO:1902554 GO:1902911 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03022 ko03420 ko05203 map03022 map03420 map05203

Pfam Domains

Protein Families

C1_4 Ssl1

Protein Analysis

421

Amino Acids

46.55

Weight (kDa)

6.19

Isoelectric Point (pI)

53.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VWA_2	PF13519	85 - 192	1.7e-10	von Willebrand factor type A domain
Ssl1	PF04056	87 - 277	4.5e-86	Ssl1-like
C1_4	PF07975	361 - 408	2.3e-18	TFIIH C1-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012510)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05055
fragaria_vesca	FvH4_3g32970
malus_domestica	MD03G1112800.v1.1 MD11G1132000.v1.1
prunus_persica	Prupe.6G097100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0060301
rosa_laevigata	RLG00000035300 RLG00000035353
rosa_multiflora	Rmu_co8508299.1_g000001 Rmu_sc0003366.1_g000003
rosa_roxburghii	Rroxscaffold_1G00020480
rosa_rugosa	Rorug05G0328500
rosa_samantha	Rh5AG392700 Rh5AG393200 Rh5BG405800 Rh5CG429300 Rh5CG429700 Rh5DG420800
rosa_wichuraiana	Rw5G037020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	548
AccII	CGCG	1 cut(s)	207
AccIII	TCCGGA	1 cut(s)	143
AciI	CCGC	5 cut(s)	193, 196, 199, 210, 368
AclWI	GGATC	3 cut(s)	432, 519, 590
AcoI	YGGCCR	1 cut(s)	855
AcsI	RAATTY	2 cut(s)	675, 794
AcyI	GRCGYC	1 cut(s)	22
AfaI	GTAC	4 cut(s)	519, 589, 719, 1020
AfiI	CCNNNNNNNGG	6 cut(s)	111, 274, 313, 548, 645, 1131
AgeI	ACCGGT	1 cut(s)	707
AgsI	TTSAA	1 cut(s)	1172
AhdI	GACNNNNNGTC	2 cut(s)	112, 169
AjnI	CCWGG	6 cut(s)	86, 384, 598, 1111, 1210, 1235
AjuI	GAANNNNNNNTTGG	2 cut(s)	1086, 1118
AluBI	AGCT	9 cut(s)	38, 98, 281, 458, 581, 893, 934, 1079, 1197
AluI	AGCT	9 cut(s)	38, 98, 281, 458, 581, 893, 934, 1079, 1197
Alw21I	GWGCWC	2 cut(s)	653, 1226
Alw26I	GTCTC	4 cut(s)	129, 242, 450, 668
AlwI	GGATC	3 cut(s)	432, 519, 590
AlwNI	CAGNNNCTG	1 cut(s)	591
Ama87I	CYCGRG	1 cut(s)	440
Aor13HI	TCCGGA	1 cut(s)	143
AoxI	GGCC	4 cut(s)	76, 382, 855, 1126
ApeKI	GCWGC	5 cut(s)	83, 278, 281, 839, 1089
ApoI	RAATTY	2 cut(s)	675, 794
AsiGI	ACCGGT	1 cut(s)	707
AspA2I	CCTAGG	1 cut(s)	908
AspLEI	GCGC	1 cut(s)	209
AspS9I	GGNCC	2 cut(s)	1033, 1109
AsuC2I	CCSGG	1 cut(s)	1125
AsuHPI	GGTGA	2 cut(s)	400, 497
AvaI	CYCGRG	1 cut(s)	440
AvaII	GGWCC	2 cut(s)	1033, 1109
AvrII	CCTAGG	1 cut(s)	908
BaeI	ACNNNNGTAYC	4 cut(s)	509, 542, 889, 922
BalI	TGGCCA	1 cut(s)	857
BanII	GRGCYC	1 cut(s)	851
BauI	CACGAG	1 cut(s)	921
BbsI	GAAGAC	2 cut(s)	51, 57
Bbv12I	GWGCWC	2 cut(s)	653, 1226
BbvCI	CCTCAGC	1 cut(s)	39
BbvI	GCAGC	5 cut(s)	70, 268, 290, 851, 1076
BccI	CCATC	4 cut(s)	395, 457, 550, 814
BceAI	ACGGC	1 cut(s)	25
BciT130I	CCWGG	6 cut(s)	88, 386, 600, 1113, 1212, 1237
BciVI	GTATCC	1 cut(s)	890
BclI	TGATCA	1 cut(s)	1054
BcnI	CCSGG	1 cut(s)	1125
BcoDI	GTCTC	4 cut(s)	129, 242, 450, 668
BfaI	CTAG	3 cut(s)	909, 1074, 1227
BfmI	CTRYAG	4 cut(s)	128, 282, 497, 939
BfuI	GTATCC	1 cut(s)	890
BisI	GCNGC	8 cut(s)	84, 196, 199, 210, 279, 282, 840, 1090
BlnI	CCTAGG	1 cut(s)	908
BlsI	GCNGC	8 cut(s)	85, 197, 200, 211, 280, 283, 841, 1091
Bme1390I	CCNGG	7 cut(s)	88, 386, 600, 1113, 1125, 1212, 1237
Bme18I	GGWCC	2 cut(s)	1033, 1109
BmeRI	GACNNNNNGTC	2 cut(s)	112, 169
BmeT110I	CYCGRG	1 cut(s)	440
BmgT120I	GGNCC	2 cut(s)	1033, 1109
BmiI	GGNNCC	1 cut(s)	1035
BmrFI	CCNGG	7 cut(s)	88, 386, 600, 1113, 1125, 1212, 1237
BpiI	GAAGAC	2 cut(s)	51, 57
BpmI	CTGGAG	3 cut(s)	137, 621, 765
Bpu10I	CCTNAGC	1 cut(s)	39
BpuMI	CCSGG	1 cut(s)	1125
BsaHI	GRCGYC	1 cut(s)	22
BsaI	GGTCTC	2 cut(s)	242, 668
BsaJI	CCNNGG	3 cut(s)	87, 908, 1210
BsaWI	WCCGGW	2 cut(s)	143, 707
BsaXI	ACNNNNNCTCC	2 cut(s)	125, 155
Bsc4I	CCNNNNNNNGG	6 cut(s)	111, 274, 313, 548, 645, 1131
Bse118I	RCCGGY	1 cut(s)	707
Bse1I	ACTGG	2 cut(s)	169, 477
Bse3DI	GCAATG	1 cut(s)	412
BseAI	TCCGGA	1 cut(s)	143
BseBI	CCWGG	6 cut(s)	88, 386, 600, 1113, 1212, 1237
BseDI	CCNNGG	3 cut(s)	87, 908, 1210
BseGI	GGATG	1 cut(s)	739
BseLI	CCNNNNNNNGG	6 cut(s)	111, 274, 313, 548, 645, 1131
BseMI	GCAATG	1 cut(s)	412
BseMII	CTCAG	4 cut(s)	30, 598, 666, 681
BseNI	ACTGG	2 cut(s)	169, 477
BseXI	GCAGC	5 cut(s)	70, 268, 290, 851, 1076
Bsh1236I	CGCG	1 cut(s)	207
BshFI	GGCC	4 cut(s)	78, 384, 857, 1128
BshTI	ACCGGT	1 cut(s)	707
BsiHKAI	GWGCWC	2 cut(s)	653, 1226
BsiHKCI	CYCGRG	1 cut(s)	440
BsiSI	CCGG	3 cut(s)	144, 708, 1125
BslFI	GGGAC	4 cut(s)	157, 423, 478, 1019
BslI	CCNNNNNNNGG	6 cut(s)	111, 274, 313, 548, 645, 1131
BsmAI	GTCTC	4 cut(s)	129, 242, 450, 668
BsmFI	GGGAC	4 cut(s)	157, 423, 478, 1019
BsmI	GAATGC	3 cut(s)	482, 1178, 1231
BsnI	GGCC	4 cut(s)	78, 384, 857, 1128
Bso31I	GGTCTC	2 cut(s)	242, 668
BsoBI	CYCGRG	1 cut(s)	440
Bsp1286I	GDGCHC	3 cut(s)	653, 851, 1226
Bsp13I	TCCGGA	1 cut(s)	143
Bsp1407I	TGTACA	1 cut(s)	517
Bsp143I	GATC	5 cut(s)	424, 511, 567, 595, 1054
BspACI	CCGC	5 cut(s)	193, 196, 199, 210, 368
BspANI	GGCC	4 cut(s)	78, 384, 857, 1128
BspCNI	CTCAG	4 cut(s)	31, 597, 665, 680
BspEI	TCCGGA	1 cut(s)	143
BspFNI	CGCG	1 cut(s)	207
BspHI	TCATGA	1 cut(s)	1189
BspLI	GGNNCC	1 cut(s)	1035
BspMAI	CTGCAG	2 cut(s)	132, 286
BspPI	GGATC	3 cut(s)	432, 519, 590
BspTNI	GGTCTC	2 cut(s)	242, 668
BsrDI	GCAATG	1 cut(s)	412
BsrFI	RCCGGY	1 cut(s)	707
BsrGI	TGTACA	1 cut(s)	517
BsrI	ACTGG	2 cut(s)	169, 477
BssAI	RCCGGY	1 cut(s)	707
BssECI	CCNNGG	3 cut(s)	87, 908, 1210
BssMI	GATC	5 cut(s)	424, 511, 567, 595, 1054
BssNI	GRCGYC	1 cut(s)	22
BssSI	CACGAG	1 cut(s)	921
BssT1I	CCWWGG	1 cut(s)	908
Bst2BI	CACGAG	1 cut(s)	921
Bst2UI	CCWGG	6 cut(s)	88, 386, 600, 1113, 1212, 1237
Bst4CI	ACNGT	1 cut(s)	394
BstACI	GRCGYC	1 cut(s)	22
BstAPI	GCANNNNNTGC	1 cut(s)	797
BstAUI	TGTACA	1 cut(s)	517
BstC8I	GCNNGC	3 cut(s)	96, 1141, 1199
BstDEI	CTNAG	6 cut(s)	39, 273, 371, 584, 652, 667
BstENI	CCTNNNNNAGG	1 cut(s)	272
BstF5I	GGATG	1 cut(s)	739
BstFNI	CGCG	1 cut(s)	207
BstHHI	GCGC	1 cut(s)	209
BstKTI	GATC	5 cut(s)	427, 514, 570, 598, 1057
BstMAI	GTCTC	4 cut(s)	129, 242, 450, 668
BstMBI	GATC	5 cut(s)	424, 511, 567, 595, 1054
BstMWI	GCNNNNNNNGC	5 cut(s)	204, 218, 797, 1149, 1173
BstNI	CCWGG	6 cut(s)	88, 386, 600, 1113, 1212, 1237
BstNSI	RCATGY	2 cut(s)	185, 770
BstSCI	CCNGG	7 cut(s)	86, 384, 598, 1111, 1123, 1210, 1235
BstSFI	CTRYAG	4 cut(s)	128, 282, 497, 939
BstUI	CGCG	1 cut(s)	207
BstV1I	GCAGC	5 cut(s)	70, 268, 290, 851, 1076
BstV2I	GAAGAC	2 cut(s)	51, 57
BstX2I	RGATCY	2 cut(s)	424, 511
BstYI	RGATCY	2 cut(s)	424, 511
BsuI	GTATCC	1 cut(s)	890
BsuRI	GGCC	4 cut(s)	78, 384, 857, 1128
BtsCI	GGATG	1 cut(s)	739
BtsI	GCAGTG	1 cut(s)	216
BtsIMutI	CAGTG	1 cut(s)	216
Cac8I	GCNNGC	3 cut(s)	96, 1141, 1199
CaiI	CAGNNNCTG	1 cut(s)	591
CciI	TCATGA	1 cut(s)	1189
CfoI	GCGC	1 cut(s)	209
Cfr10I	RCCGGY	1 cut(s)	707
Cfr13I	GGNCC	2 cut(s)	1033, 1109
CseI	GACGC	2 cut(s)	30, 71
Csp6I	GTAC	4 cut(s)	518, 588, 718, 1019
CspAI	ACCGGT	1 cut(s)	707
CviAII	CATG	6 cut(s)	182, 449, 521, 767, 867, 1190
CviQI	GTAC	4 cut(s)	518, 588, 718, 1019
DdeI	CTNAG	6 cut(s)	39, 273, 371, 584, 652, 667
DpnI	GATC	5 cut(s)	426, 513, 569, 597, 1056
DpnII	GATC	5 cut(s)	424, 511, 567, 595, 1054
DriI	GACNNNNNGTC	2 cut(s)	112, 169
EaeI	YGGCCR	1 cut(s)	855
Eam1105I	GACNNNNNGTC	2 cut(s)	112, 169
Eco130I	CCWWGG	1 cut(s)	908
Eco24I	GRGCYC	1 cut(s)	851
Eco31I	GGTCTC	2 cut(s)	242, 668
Eco47I	GGWCC	2 cut(s)	1033, 1109
Eco88I	CYCGRG	1 cut(s)	440
EcoNI	CCTNNNNNAGG	1 cut(s)	272
EcoO109I	RGGNCCY	1 cut(s)	1033
EcoRII	CCWGG	6 cut(s)	86, 384, 598, 1111, 1210, 1235
EcoT14I	CCWWGG	1 cut(s)	908
EcoT38I	GRGCYC	1 cut(s)	851
ErhI	CCWWGG	1 cut(s)	908
FaeI	CATG	6 cut(s)	185, 452, 524, 770, 870, 1193
FalI	AAGNNNNNCTT	2 cut(s)	809, 841
FaqI	GGGAC	4 cut(s)	157, 423, 478, 1019
FatI	CATG	6 cut(s)	181, 448, 520, 766, 866, 1189
FauNDI	CATATG	2 cut(s)	547, 683
FbaI	TGATCA	1 cut(s)	1054
Fnu4HI	GCNGC	8 cut(s)	84, 196, 199, 210, 279, 282, 840, 1090
FokI	GGATG	1 cut(s)	746
FriOI	GRGCYC	1 cut(s)	851
Fsp4HI	GCNGC	8 cut(s)	84, 196, 199, 210, 279, 282, 840, 1090
FspBI	CTAG	3 cut(s)	909, 1074, 1227
GlaI	GCGC	1 cut(s)	208
GluI	GCNGC	8 cut(s)	84, 196, 199, 210, 279, 282, 840, 1090
GsuI	CTGGAG	3 cut(s)	137, 621, 765
HaeIII	GGCC	4 cut(s)	78, 384, 857, 1128
HapII	CCGG	3 cut(s)	144, 708, 1125
HgaI	GACGC	2 cut(s)	30, 71
HhaI	GCGC	1 cut(s)	209
Hin1I	GRCGYC	1 cut(s)	22
Hin1II	CATG	6 cut(s)	185, 452, 524, 770, 870, 1193
Hin6I	GCGC	1 cut(s)	207
HinP1I	GCGC	1 cut(s)	207
HindIII	AAGCTT	2 cut(s)	456, 1195
HinfI	GANTC	8 cut(s)	122, 140, 225, 364, 443, 488, 538, 1240
HpaII	CCGG	3 cut(s)	144, 708, 1125
HphI	GGTGA	2 cut(s)	400, 497
Hpy166II	GTNNAC	1 cut(s)	470
Hpy188I	TCNGA	1 cut(s)	537
Hpy188III	TCNNGA	4 cut(s)	144, 440, 622, 1190
Hpy8I	GTNNAC	1 cut(s)	470
Hpy99I	CGWCG	4 cut(s)	59, 62, 65, 110
HpyAV	CCTTC	3 cut(s)	212, 1139, 1250
HpyCH4III	ACNGT	1 cut(s)	394
HpyCH4V	TGCA	9 cut(s)	130, 284, 687, 728, 770, 800, 915, 1152, 1201
HpyF10VI	GCNNNNNNNGC	5 cut(s)	204, 218, 797, 1149, 1173
HpyF3I	CTNAG	6 cut(s)	39, 273, 371, 584, 652, 667
Hsp92I	GRCGYC	1 cut(s)	22
Hsp92II	CATG	6 cut(s)	185, 452, 524, 770, 870, 1193
HspAI	GCGC	1 cut(s)	207
Kpn2I	TCCGGA	1 cut(s)	143
Ksp22I	TGATCA	1 cut(s)	1054
Kzo9I	GATC	5 cut(s)	424, 511, 567, 595, 1054
LmnI	GCTCC	2 cut(s)	91, 890
Lsp1109I	GCAGC	5 cut(s)	70, 268, 290, 851, 1076
MaeI	CTAG	3 cut(s)	909, 1074, 1227
MaeIII	GTNAC	4 cut(s)	388, 485, 869, 1041
MalI	GATC	5 cut(s)	426, 513, 569, 597, 1056
MboI	GATC	5 cut(s)	424, 511, 567, 595, 1054
MboII	GAAGA	4 cut(s)	56, 62, 966, 1094
MfeI	CAATTG	1 cut(s)	801
MflI	RGATCY	2 cut(s)	424, 511
MhlI	GDGCHC	3 cut(s)	653, 851, 1226
MlsI	TGGCCA	1 cut(s)	857
MluCI	AATT	5 cut(s)	642, 675, 794, 801, 1050
MluNI	TGGCCA	1 cut(s)	857
MlyI	GAGTC	4 cut(s)	131, 149, 452, 482
Mox20I	TGGCCA	1 cut(s)	857
MroI	TCCGGA	1 cut(s)	143
MscI	TGGCCA	1 cut(s)	857
MseI	TTAA	3 cut(s)	453, 531, 746
Msp20I	TGGCCA	1 cut(s)	857
MspA1I	CMGCKG	1 cut(s)	281
MspI	CCGG	3 cut(s)	144, 708, 1125
MspR9I	CCNGG	7 cut(s)	88, 386, 600, 1113, 1125, 1212, 1237
MunI	CAATTG	1 cut(s)	801
Mva1269I	GAATGC	3 cut(s)	482, 1178, 1231
MvaI	CCWGG	6 cut(s)	88, 386, 600, 1113, 1212, 1237
MvnI	CGCG	1 cut(s)	207
MwoI	GCNNNNNNNGC	5 cut(s)	204, 218, 797, 1149, 1173
NciI	CCSGG	1 cut(s)	1125
NdeI	CATATG	2 cut(s)	547, 683
NdeII	GATC	5 cut(s)	424, 511, 567, 595, 1054
NlaIII	CATG	6 cut(s)	185, 452, 524, 770, 870, 1193
NlaIV	GGNNCC	1 cut(s)	1035
NmuCI	GTSAC	4 cut(s)	388, 485, 869, 1041
NspI	RCATGY	2 cut(s)	185, 770
PagI	TCATGA	1 cut(s)	1189
PcsI	WCGNNNNNNNCGW	2 cut(s)	54, 304
PctI	GAATGC	3 cut(s)	482, 1178, 1231
PfeI	GAWTC	4 cut(s)	225, 364, 538, 1240
PflFI	GACNNNGTC	1 cut(s)	1031
PflMI	CCANNNNNTGG	1 cut(s)	548
PfoI	TCCNGGA	3 cut(s)	598, 1111, 1235
PinAI	ACCGGT	1 cut(s)	707
PkrI	GCNGC	8 cut(s)	85, 197, 200, 211, 280, 283, 841, 1091
PleI	GAGTC	4 cut(s)	130, 148, 451, 482
PpsI	GAGTC	4 cut(s)	130, 148, 451, 482
PpuMI	RGGWCCY	1 cut(s)	1033
Psp5II	RGGWCCY	1 cut(s)	1033
Psp6I	CCWGG	6 cut(s)	86, 384, 598, 1111, 1210, 1235
PspGI	CCWGG	6 cut(s)	86, 384, 598, 1111, 1210, 1235
PspN4I	GGNNCC	1 cut(s)	1035
PspPI	GGNCC	2 cut(s)	1033, 1109
PspPPI	RGGWCCY	1 cut(s)	1033
PstI	CTGCAG	2 cut(s)	132, 286
PstNI	CAGNNNCTG	1 cut(s)	591
PsuI	RGATCY	2 cut(s)	424, 511
PsyI	GACNNNGTC	1 cut(s)	1031
PvuII	CAGCTG	1 cut(s)	281
RsaI	GTAC	4 cut(s)	519, 589, 719, 1020
RsaNI	GTAC	4 cut(s)	518, 588, 718, 1019
SaqAI	TTAA	3 cut(s)	453, 531, 746
SatI	GCNGC	8 cut(s)	84, 196, 199, 210, 279, 282, 840, 1090
Sau3AI	GATC	5 cut(s)	424, 511, 567, 595, 1054
Sau96I	GGNCC	2 cut(s)	1033, 1109
SchI	GAGTC	4 cut(s)	131, 149, 452, 482
ScrFI	CCNGG	7 cut(s)	88, 386, 600, 1113, 1125, 1212, 1237
SduI	GDGCHC	3 cut(s)	653, 851, 1226
SfcI	CTRYAG	4 cut(s)	128, 282, 497, 939
SinI	GGWCC	2 cut(s)	1033, 1109
Sse9I	AATT	5 cut(s)	642, 675, 794, 801, 1050
SsiI	CCGC	5 cut(s)	193, 196, 199, 210, 368
SspMI	CTAG	3 cut(s)	909, 1074, 1227
StyD4I	CCNGG	7 cut(s)	86, 384, 598, 1111, 1123, 1210, 1235
StyI	CCWWGG	1 cut(s)	908
TaaI	ACNGT	1 cut(s)	394
TaqI	TCGA	2 cut(s)	264, 298
TaqII	GACCGA	2 cut(s)	650, 1097
TasI	AATT	5 cut(s)	642, 675, 794, 801, 1050
TatI	WGTACW	2 cut(s)	517, 717
TauI	GCSGC	3 cut(s)	198, 201, 212
TfiI	GAWTC	4 cut(s)	225, 364, 538, 1240
Tru1I	TTAA	3 cut(s)	453, 531, 746
Tru9I	TTAA	3 cut(s)	453, 531, 746
TscAI	CASTG	1 cut(s)	223
TseFI	GTSAC	4 cut(s)	388, 485, 869, 1041
TseI	GCWGC	5 cut(s)	83, 278, 281, 839, 1089
Tsp45I	GTSAC	4 cut(s)	388, 485, 869, 1041
TspDTI	ATGAA	7 cut(s)	17, 244, 331, 670, 855, 1178, 1206
TspGWI	ACGGA	2 cut(s)	45, 437
TspRI	CASTG	1 cut(s)	223
Tth111I	GACNNNGTC	1 cut(s)	1031
Van91I	CCANNNNNTGG	1 cut(s)	548
VpaK11BI	GGWCC	2 cut(s)	1033, 1109
XagI	CCTNNNNNAGG	1 cut(s)	272
XapI	RAATTY	2 cut(s)	675, 794
XceI	RCATGY	2 cut(s)	185, 770
XcmI	CCANNNNNNNNNTGG	1 cut(s)	707
XmaJI	CCTAGG	1 cut(s)	908
XspI	CTAG	3 cut(s)	909, 1074, 1227

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.