MD03G1192200.v1.1

Cell division protein ftsZ

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
26391256 .. 26394476
3221 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1192200.v1.1.491

Sequence Viewer

Length: 1266 bp
ATGATGGCTTCATGGACAAACCCGAACGACCTAATCTCGACGACGTCGTCCTCAATTGCCGCAGCATTTCACCACCATAAGGCACTGCCTTCCCTCGGAACATGCATTCCTCTGAGCGGCAAGAGAAGTAGCCCATGGAAGCGTTACCGTTTTGGGGTCGTGAGCTGTTCCTTTGCGCCCACGGAATCGGCCAAGATTAAGGTCGTTGGGGTCGGCGGAGGTGGCAACAATGCCGTTAATCGCATGATTGGCAGCGGTTTACATGGTGTTGATTTCTACGCCATAAACACGGATGCTCAGGCGCTCTTGCAGTCTGCTGCTGAGTACCCGCTTCAAATTGGGGAGCTTTTGACTCGTGGACTAGGTACCGGTGGGAATCCGCTTTTGGGGGAGCAAGCGGCTGAGGAATCAAAAGAGGCTATTTCAAATGCTCTAAAGGGCTCAGATCTTGTCTTTGTAACAGCTGGGATGGGTGGAGGAACTGGGTCCGGTGCTGCCCCCATTGTTGCACAGATATCCAAGGAGGCGGGTTATTTGACTGTTGGTGTGGTTACCTACCCTTTCAGCTTTGAAGGGCGTAAAAGATCTTTGCAGGCATTCGAGGCCATTGAAAAGTTGCAGAAAAATGTTGACACTCTAATAGTGATACCAAACGATCGCCTCCTTGATATTGCTGATGAGCAGACACCCCTACAAGATGCTTTCCTTCTTGCTGATGATGTTTTACGTCAGGGAGTGCAAGGAATTTCTGACATAATTACAATACCCGGACTGGTGAATGTGGATTTTGCAGATGTAAAGGCAGTCATGAAAAACTCAGGAACTGCAATGCTCGGAGTAGGTGTTTCCTCCAGCAAAAACCGTGCAGAAGAAGCAGCTGAACAGGCGACTTTGGCTCCTCTGATTGGATCTTCAATTCAATCAGCTACTGGCGTTGTGTATAATATCACAGGTGGAAAGGACATAACCCTGCAGGAAGTCAACAGAGTGTCTCAGGTCGTGACGAGTTTGGCAGATCCTTCTGCTAACATAATATTTGGGGCTGTTGTGGATGATCGCTACAACGGAGAGCTTCATGTGACTATTATTGCAACAGGCTTTTCGCAGTCATTTCAGAAGACACTACTAACAGACCCCAAGGCAGCAAAGCTGCTTGACAAGGTTGCAGGGGGTCAAGAAAGCAGAGGGATTCCCCTTCCCCTAAAGTCCTCATCCTCACCCTCCACCATTTCATCAAAACCGTCTCCGAGAAAGCTTTTCTTTTAA

Protein Analysis

422

Amino Acids

43.98

Weight (kDa)

6.25

Isoelectric Point (pI)

36.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tubulin PF00091 65 - 225 7.6e-48 Tubulin/FtsZ family, GTPase domain
FtsZ_C PF12327 274 - 367 8.3e-30 FtsZ family, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 46
AatII GACGTC 1 cut(s) 47
Acc65I GGTACC 1 cut(s) 365
AccB1I GGYRCC 1 cut(s) 365
AccBSI CCGCTC 1 cut(s) 117
AciI CCGC 8 cut(s) 60, 117, 216, 255, 329, 380, 398, 527
AclWI GGATC 2 cut(s) 916, 1010
AcoI YGGCCR 1 cut(s) 189
AcsI RAATTY 1 cut(s) 744
AcyI GRCGYC 1 cut(s) 44
AfaI GTAC 2 cut(s) 326, 367
AfiI CCNNNNNNNGG 6 cut(s) 79, 95, 116, 154, 386, 905
AgeI ACCGGT 1 cut(s) 368
AgsI TTSAA 6 cut(s) 335, 426, 572, 611, 915, 920
AjuI GAANNNNNNNTTGG 2 cut(s) 368, 400
AloI GAACNNNNNNTCC 2 cut(s) 91, 123
AluBI AGCT 9 cut(s) 165, 346, 464, 567, 878, 926, 1072, 1150, 1255
AluI AGCT 9 cut(s) 165, 346, 464, 567, 878, 926, 1072, 1150, 1255
Alw26I GTCTC 2 cut(s) 996, 1248
AlwI GGATC 2 cut(s) 916, 1010
AlwNI CAGNNNCTG 2 cut(s) 824, 929
AoxI GGCC 2 cut(s) 189, 603
ApeKI GCWGC 7 cut(s) 62, 252, 317, 494, 875, 1142, 1150
ApoI RAATTY 1 cut(s) 744
AsiGI ACCGGT 1 cut(s) 368
Asp718I GGTACC 1 cut(s) 365
AspLEI GCGC 2 cut(s) 178, 304
AspS9I GGNCC 1 cut(s) 486
AsuC2I CCSGG 1 cut(s) 768
AsuHPI GGTGA 3 cut(s) 62, 787, 1209
AvaII GGWCC 1 cut(s) 486
BanI GGYRCC 1 cut(s) 365
BanII GRGCYC 1 cut(s) 443
BauI CACGAG 1 cut(s) 354
BbsI GAAGAC 1 cut(s) 1124
BbvCI CCTCAGC 1 cut(s) 402
BbvI GCAGC 7 cut(s) 74, 264, 304, 481, 887, 1137, 1154
BccI CCATC 1 cut(s) 463
BceAI ACGGC 1 cut(s) 218
BcnI CCSGG 1 cut(s) 768
BcoDI GTCTC 2 cut(s) 996, 1248
BfaI CTAG 1 cut(s) 362
BfmI CTRYAG 1 cut(s) 971
BfoI RGCGCY 1 cut(s) 305
BglII AGATCT 2 cut(s) 445, 584
Bme1390I CCNGG 1 cut(s) 768
Bme18I GGWCC 1 cut(s) 486
BmgT120I GGNCC 1 cut(s) 486
BmiI GGNNCC 3 cut(s) 367, 487, 897
BmrFI CCNGG 1 cut(s) 768
BmrI ACTGGG 1 cut(s) 492
BmsI GCATC 2 cut(s) 283, 688
BmuI ACTGGG 1 cut(s) 492
BpiI GAAGAC 1 cut(s) 1124
BpmI CTGGAG 1 cut(s) 835
Bpu10I CCTNAGC 2 cut(s) 297, 402
BpuMI CCSGG 1 cut(s) 768
BsaHI GRCGYC 1 cut(s) 44
BsaJI CCNNGG 5 cut(s) 94, 134, 180, 519, 1137
BsaWI WCCGGW 2 cut(s) 368, 488
BsaXI ACNNNNNCTCC 4 cut(s) 828, 858, 880, 910
Bsc4I CCNNNNNNNGG 6 cut(s) 79, 95, 116, 154, 386, 905
Bse118I RCCGGY 1 cut(s) 368
Bse1I ACTGG 3 cut(s) 487, 777, 934
Bse3DI GCAATG 1 cut(s) 834
BseDI CCNNGG 5 cut(s) 94, 134, 180, 519, 1137
BseGI GGATG 4 cut(s) 298, 474, 1057, 1211
BseLI CCNNNNNNNGG 6 cut(s) 79, 95, 116, 154, 386, 905
BseMI GCAATG 1 cut(s) 834
BseMII CTCAG 7 cut(s) 104, 311, 312, 393, 456, 831, 1007
BseNI ACTGG 3 cut(s) 487, 777, 934
BseRI GAGGAG 1 cut(s) 888
BseXI GCAGC 7 cut(s) 74, 264, 304, 481, 887, 1137, 1154
BseYI CCCAGC 1 cut(s) 464
BsgI GTGCAG 1 cut(s) 885
Bsh1285I CGRYCG 1 cut(s) 658
BshFI GGCC 2 cut(s) 191, 605
BshNI GGYRCC 1 cut(s) 365
BshTI ACCGGT 1 cut(s) 368
BsiEI CGRYCG 1 cut(s) 658
BsiSI CCGG 3 cut(s) 369, 489, 768
BslI CCNNNNNNNGG 6 cut(s) 79, 95, 116, 154, 386, 905
BsmAI GTCTC 2 cut(s) 996, 1248
BsmBI CGTCTC 1 cut(s) 1248
BsmI GAATGC 2 cut(s) 105, 596
BsnI GGCC 2 cut(s) 191, 605
Bsp1286I GDGCHC 1 cut(s) 443
Bsp143I GATC 6 cut(s) 445, 584, 655, 908, 1015, 1054
Bsp19I CCATGG 1 cut(s) 134
BspACI CCGC 8 cut(s) 60, 117, 216, 255, 329, 380, 398, 527
BspANI GGCC 2 cut(s) 191, 605
BspCNI CTCAG 7 cut(s) 105, 310, 313, 394, 455, 830, 1006
BspHI TCATGA 1 cut(s) 807
BspLI GGNNCC 3 cut(s) 367, 487, 897
BspMAI CTGCAG 1 cut(s) 975
BspPI GGATC 2 cut(s) 916, 1010
BspT107I GGYRCC 1 cut(s) 365
BsrBI CCGCTC 1 cut(s) 117
BsrDI GCAATG 1 cut(s) 834
BsrFI RCCGGY 1 cut(s) 368
BsrI ACTGG 3 cut(s) 487, 777, 934
BssAI RCCGGY 1 cut(s) 368
BssECI CCNNGG 5 cut(s) 94, 134, 180, 519, 1137
BssMI GATC 6 cut(s) 445, 584, 655, 908, 1015, 1054
BssNI GRCGYC 1 cut(s) 44
BssSI CACGAG 1 cut(s) 354
BssT1I CCWWGG 3 cut(s) 134, 519, 1137
Bst2BI CACGAG 1 cut(s) 354
Bst4CI ACNGT 4 cut(s) 149, 541, 863, 1242
BstACI GRCGYC 1 cut(s) 44
BstC8I GCNNGC 2 cut(s) 396, 594
BstDEI CTNAG 7 cut(s) 113, 297, 321, 402, 442, 817, 993
BstDSI CCRYGG 2 cut(s) 134, 180
BstEII GGTNACC 1 cut(s) 550
BstF5I GGATG 4 cut(s) 298, 474, 1057, 1211
BstH2I RGCGCY 1 cut(s) 305
BstHHI GCGC 2 cut(s) 178, 304
BstKTI GATC 6 cut(s) 448, 587, 658, 911, 1018, 1057
BstMAI GTCTC 2 cut(s) 996, 1248
BstMBI GATC 6 cut(s) 445, 584, 655, 908, 1015, 1054
BstMCI CGRYCG 1 cut(s) 658
BstMWI GCNNNNNNNGC 6 cut(s) 222, 249, 602, 872, 884, 893
BstNSI RCATGY 1 cut(s) 105
BstPI GGTNACC 1 cut(s) 550
BstSCI CCNGG 1 cut(s) 766
BstSFI CTRYAG 1 cut(s) 971
BstV1I GCAGC 7 cut(s) 74, 264, 304, 481, 887, 1137, 1154
BstV2I GAAGAC 1 cut(s) 1124
BstX2I RGATCY 4 cut(s) 445, 584, 908, 1015
BstYI RGATCY 4 cut(s) 445, 584, 908, 1015
BsuRI GGCC 2 cut(s) 191, 605
BtgI CCRYGG 2 cut(s) 134, 180
BtsCI GGATG 4 cut(s) 298, 474, 1057, 1211
BtsI GCAGTG 1 cut(s) 83
BtsIMutI CAGTG 1 cut(s) 83
Cac8I GCNNGC 2 cut(s) 396, 594
CaiI CAGNNNCTG 2 cut(s) 824, 929
CciI TCATGA 1 cut(s) 807
CfoI GCGC 2 cut(s) 178, 304
Cfr10I RCCGGY 1 cut(s) 368
Cfr13I GGNCC 1 cut(s) 486
Csp6I GTAC 2 cut(s) 325, 366
CspAI ACCGGT 1 cut(s) 368
CviAII CATG 7 cut(s) 12, 102, 135, 244, 263, 808, 1076
CviQI GTAC 2 cut(s) 325, 366
DdeI CTNAG 7 cut(s) 113, 297, 321, 402, 442, 817, 993
DpnI GATC 6 cut(s) 447, 586, 657, 910, 1017, 1056
DpnII GATC 6 cut(s) 445, 584, 655, 908, 1015, 1054
DrdI GACNNNNNNGTC 1 cut(s) 46
DseDI GACNNNNNNGTC 1 cut(s) 46
EaeI YGGCCR 1 cut(s) 189
EciI GGCGGA 1 cut(s) 231
Eco130I CCWWGG 3 cut(s) 134, 519, 1137
Eco24I GRGCYC 1 cut(s) 443
Eco32I GATATC 1 cut(s) 516
Eco47I GGWCC 1 cut(s) 486
Eco91I GGTNACC 1 cut(s) 550
EcoO65I GGTNACC 1 cut(s) 550
EcoRV GATATC 1 cut(s) 516
EcoT14I CCWWGG 3 cut(s) 134, 519, 1137
EcoT22I ATGCAT 1 cut(s) 107
EcoT38I GRGCYC 1 cut(s) 443
ErhI CCWWGG 3 cut(s) 134, 519, 1137
Esp3I CGTCTC 1 cut(s) 1248
FaeI CATG 7 cut(s) 15, 105, 138, 247, 266, 811, 1079
FalI AAGNNNNNCTT 1 cut(s) 1244
FatI CATG 7 cut(s) 11, 101, 134, 243, 262, 807, 1075
FauI CCCGC 2 cut(s) 336, 520
FokI GGATG 4 cut(s) 305, 481, 1064, 1198
FriOI GRGCYC 1 cut(s) 443
FspBI CTAG 1 cut(s) 362
GlaI GCGC 2 cut(s) 177, 303
GsaI CCCAGC 1 cut(s) 468
GsuI CTGGAG 1 cut(s) 835
HaeII RGCGCY 1 cut(s) 305
HaeIII GGCC 2 cut(s) 191, 605
HapII CCGG 3 cut(s) 369, 489, 768
HhaI GCGC 2 cut(s) 178, 304
Hin1I GRCGYC 1 cut(s) 44
Hin1II CATG 7 cut(s) 15, 105, 138, 247, 266, 811, 1079
Hin6I GCGC 2 cut(s) 176, 302
HinP1I GCGC 2 cut(s) 176, 302
HincII GTYRAC 2 cut(s) 631, 982
HindII GTYRAC 2 cut(s) 631, 982
HindIII AAGCTT 1 cut(s) 1253
HinfI GANTC 5 cut(s) 185, 352, 376, 407, 1189
HpaII CCGG 3 cut(s) 369, 489, 768
HphI GGTGA 3 cut(s) 62, 787, 1209
Hpy166II GTNNAC 4 cut(s) 260, 359, 631, 982
Hpy188I TCNGA 8 cut(s) 98, 114, 445, 751, 836, 903, 1116, 1248
Hpy188III TCNNGA 6 cut(s) 37, 160, 808, 819, 1000, 1175
Hpy8I GTNNAC 4 cut(s) 260, 359, 631, 982
Hpy99I CGWCG 3 cut(s) 43, 46, 49
HpyAV CCTTC 5 cut(s) 99, 566, 716, 1029, 1205
HpyCH4III ACNGT 4 cut(s) 149, 541, 863, 1242
HpyCH4IV ACGT 2 cut(s) 44, 727
HpyF10VI GCNNNNNNNGC 6 cut(s) 222, 249, 602, 872, 884, 893
HpyF3I CTNAG 7 cut(s) 113, 297, 321, 402, 442, 817, 993
HpySE526I ACGT 2 cut(s) 44, 727
Hsp92I GRCGYC 1 cut(s) 44
Hsp92II CATG 7 cut(s) 15, 105, 138, 247, 266, 811, 1079
HspAI GCGC 2 cut(s) 176, 302
KpnI GGTACC 1 cut(s) 369
Kzo9I GATC 6 cut(s) 445, 584, 655, 908, 1015, 1054
LmnI GCTCC 3 cut(s) 343, 391, 901
Lsp1109I GCAGC 7 cut(s) 74, 264, 304, 481, 887, 1137, 1154
LweI GCATC 2 cut(s) 283, 688
MaeI CTAG 1 cut(s) 362
MaeII ACGT 2 cut(s) 44, 727
MaeIII GTNAC 5 cut(s) 143, 457, 550, 1000, 1078
MalI GATC 6 cut(s) 447, 586, 657, 910, 1017, 1056
MbiI CCGCTC 1 cut(s) 117
MboI GATC 6 cut(s) 445, 584, 655, 908, 1015, 1054
MboII GAAGA 3 cut(s) 881, 903, 1129
MfeI CAATTG 1 cut(s) 54
MflI RGATCY 4 cut(s) 445, 584, 908, 1015
MhlI GDGCHC 1 cut(s) 443
MluCI AATT 5 cut(s) 54, 336, 744, 756, 915
MlyI GAGTC 1 cut(s) 346
Mph1103I ATGCAT 1 cut(s) 107
MseI TTAA 3 cut(s) 198, 237, 1264
MspA1I CMGCKG 3 cut(s) 255, 464, 878
MspI CCGG 3 cut(s) 369, 489, 768
MspR9I CCNGG 1 cut(s) 768
MunI CAATTG 1 cut(s) 54
Mva1269I GAATGC 2 cut(s) 105, 596
MwoI GCNNNNNNNGC 6 cut(s) 222, 249, 602, 872, 884, 893
NciI CCSGG 1 cut(s) 768
NcoI CCATGG 1 cut(s) 134
NdeII GATC 6 cut(s) 445, 584, 655, 908, 1015, 1054
NlaIII CATG 7 cut(s) 15, 105, 138, 247, 266, 811, 1079
NlaIV GGNNCC 3 cut(s) 367, 487, 897
NmuCI GTSAC 2 cut(s) 1000, 1078
NsiI ATGCAT 1 cut(s) 107
NspI RCATGY 1 cut(s) 105
PagI TCATGA 1 cut(s) 807
PcsI WCGNNNNNNNCGW 1 cut(s) 44
PctI GAATGC 2 cut(s) 105, 596
PfeI GAWTC 4 cut(s) 185, 376, 407, 1189
PflFI GACNNNGTC 2 cut(s) 43, 46
PinAI ACCGGT 1 cut(s) 368
Ple19I CGATCG 1 cut(s) 658
PleI GAGTC 1 cut(s) 346
PpsI GAGTC 1 cut(s) 346
PspEI GGTNACC 1 cut(s) 550
PspFI CCCAGC 1 cut(s) 464
PspN4I GGNNCC 3 cut(s) 367, 487, 897
PspPI GGNCC 1 cut(s) 486
PstI CTGCAG 1 cut(s) 975
PstNI CAGNNNCTG 2 cut(s) 824, 929
PsuI RGATCY 4 cut(s) 445, 584, 908, 1015
PsyI GACNNNGTC 2 cut(s) 43, 46
PvuI CGATCG 1 cut(s) 658
PvuII CAGCTG 2 cut(s) 464, 878
RsaI GTAC 2 cut(s) 326, 367
RsaNI GTAC 2 cut(s) 325, 366
SaqAI TTAA 3 cut(s) 198, 237, 1264
Sau3AI GATC 6 cut(s) 445, 584, 655, 908, 1015, 1054
Sau96I GGNCC 1 cut(s) 486
SbfI CCTGCAGG 1 cut(s) 975
SchI GAGTC 1 cut(s) 346
ScrFI CCNGG 1 cut(s) 768
SdaI CCTGCAGG 1 cut(s) 975
SduI GDGCHC 1 cut(s) 443
SfaNI GCATC 2 cut(s) 283, 688
SfcI CTRYAG 1 cut(s) 971
SinI GGWCC 1 cut(s) 486
Sse8387I CCTGCAGG 1 cut(s) 975
Sse9I AATT 5 cut(s) 54, 336, 744, 756, 915
SsiI CCGC 8 cut(s) 60, 117, 216, 255, 329, 380, 398, 527
SspI AATATT 1 cut(s) 1035
SspMI CTAG 1 cut(s) 362
StyD4I CCNGG 1 cut(s) 766
StyI CCWWGG 3 cut(s) 134, 519, 1137
TaaI ACNGT 4 cut(s) 149, 541, 863, 1242
TaiI ACGT 2 cut(s) 47, 730
TaqI TCGA 2 cut(s) 38, 600
TasI AATT 5 cut(s) 54, 336, 744, 756, 915
TauI GCSGC 3 cut(s) 62, 120, 401
TfiI GAWTC 4 cut(s) 185, 376, 407, 1189
Tru1I TTAA 3 cut(s) 198, 237, 1264
Tru9I TTAA 3 cut(s) 198, 237, 1264
TscAI CASTG 1 cut(s) 90
TseFI GTSAC 2 cut(s) 1000, 1078
TseI GCWGC 7 cut(s) 62, 252, 317, 494, 875, 1142, 1150
Tsp45I GTSAC 2 cut(s) 1000, 1078
TspDTI ATGAA 3 cut(s) 824, 1064, 1221
TspGWI ACGGA 3 cut(s) 197, 305, 1080
TspRI CASTG 1 cut(s) 90
Tth111I GACNNNGTC 2 cut(s) 43, 46
VpaK11BI GGWCC 1 cut(s) 486
XapI RAATTY 1 cut(s) 744
XceI RCATGY 1 cut(s) 105
XspI CTAG 1 cut(s) 362
ZraI GACGTC 1 cut(s) 45
Zsp2I ATGCAT 1 cut(s) 107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.