transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 |
| fragaria_vesca | FvH4_4g10460 FvH4_4g10460 FvH4_4g10460 |
| malus_domestica | MD04G1049000.v1.1 |
| prunus_persica | Prupe.1G207100_v2.0.a1 Prupe.1G207100_v2.0.a1 |
| pyrus_communis | pycom04g04320 |
| rosa_chinensis | RchiOBHm_Chr4g0405961 |
| rosa_laevigata | RLG00000008802 |
| rosa_multiflora | Rmu_sc0005593.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00350690 |
| rosa_rugosa | Rorug04G0064500 |
| rosa_samantha | Rh4AG135100 Rh4BG132100 Rh4CG142800 Rh4DG130000 |
| rosa_wichuraiana | Rw4G011010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 376 |
| AcyI | GRCGYC | 1 cut(s) | 377 |
| AfaI | GTAC | 1 cut(s) | 203 |
| AfeI | AGCGCT | 1 cut(s) | 241 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 190 |
| AluBI | AGCT | 5 cut(s) | 115, 134, 145, 269, 297 |
| AluI | AGCT | 5 cut(s) | 115, 134, 145, 269, 297 |
| Alw26I | GTCTC | 1 cut(s) | 334 |
| Aor51HI | AGCGCT | 1 cut(s) | 241 |
| AspLEI | GCGC | 3 cut(s) | 242, 365, 379 |
| AsuHPI | GGTGA | 2 cut(s) | 131, 144 |
| BanI | GGYRCC | 1 cut(s) | 376 |
| BccI | CCATC | 1 cut(s) | 67 |
| BceAI | ACGGC | 1 cut(s) | 189 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 6, 40 |
| BcoDI | GTCTC | 1 cut(s) | 334 |
| BfoI | RGCGCY | 2 cut(s) | 243, 380 |
| BmiI | GGNNCC | 1 cut(s) | 378 |
| BpmI | CTGGAG | 1 cut(s) | 209 |
| BpuEI | CTTGAG | 1 cut(s) | 319 |
| BsaHI | GRCGYC | 1 cut(s) | 377 |
| BsaJI | CCNNGG | 1 cut(s) | 253 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 190 |
| Bse3DI | GCAATG | 1 cut(s) | 201 |
| BseDI | CCNNGG | 1 cut(s) | 253 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 190 |
| BseMI | GCAATG | 1 cut(s) | 201 |
| BseMII | CTCAG | 1 cut(s) | 290 |
| BseRI | GAGGAG | 1 cut(s) | 322 |
| BshNI | GGYRCC | 1 cut(s) | 376 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 190 |
| BsmAI | GTCTC | 1 cut(s) | 334 |
| BspCNI | CTCAG | 1 cut(s) | 289 |
| BspHI | TCATGA | 1 cut(s) | 217 |
| BspLI | GGNNCC | 1 cut(s) | 378 |
| BspT107I | GGYRCC | 1 cut(s) | 376 |
| BsrDI | GCAATG | 1 cut(s) | 201 |
| BssECI | CCNNGG | 1 cut(s) | 253 |
| BssNI | GRCGYC | 1 cut(s) | 377 |
| BssT1I | CCWWGG | 1 cut(s) | 253 |
| Bst6I | CTCTTC | 1 cut(s) | 60 |
| BstACI | GRCGYC | 1 cut(s) | 377 |
| BstDEI | CTNAG | 1 cut(s) | 276 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 188 |
| BstH2I | RGCGCY | 2 cut(s) | 243, 380 |
| BstHHI | GCGC | 3 cut(s) | 242, 365, 379 |
| BstMAI | GTCTC | 1 cut(s) | 334 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 303 |
| CciI | TCATGA | 1 cut(s) | 217 |
| CfoI | GCGC | 3 cut(s) | 242, 365, 379 |
| Csp6I | GTAC | 1 cut(s) | 202 |
| CviAII | CATG | 1 cut(s) | 218 |
| CviJI | RGCY | 8 cut(s) | 21, 115, 134, 145, 176, 269, 289, 297 |
| CviKI_1 | RGCY | 8 cut(s) | 21, 115, 134, 145, 176, 269, 289, 297 |
| CviQI | GTAC | 1 cut(s) | 202 |
| DdeI | CTNAG | 1 cut(s) | 276 |
| DinI | GGCGCC | 1 cut(s) | 378 |
| Eam1104I | CTCTTC | 1 cut(s) | 60 |
| EarI | CTCTTC | 1 cut(s) | 60 |
| Eco130I | CCWWGG | 1 cut(s) | 253 |
| Eco32I | GATATC | 1 cut(s) | 370 |
| Eco47III | AGCGCT | 1 cut(s) | 241 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 188 |
| EcoRV | GATATC | 1 cut(s) | 370 |
| EcoT14I | CCWWGG | 1 cut(s) | 253 |
| EgeI | GGCGCC | 1 cut(s) | 378 |
| EheI | GGCGCC | 1 cut(s) | 378 |
| ErhI | CCWWGG | 1 cut(s) | 253 |
| FaeI | CATG | 1 cut(s) | 221 |
| FaiI | YATR | 5 cut(s) | 72, 206, 219, 247, 292 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 99, 131 |
| FatI | CATG | 1 cut(s) | 217 |
| GlaI | GCGC | 3 cut(s) | 241, 364, 378 |
| GsuI | CTGGAG | 1 cut(s) | 209 |
| HaeII | RGCGCY | 2 cut(s) | 243, 380 |
| HhaI | GCGC | 3 cut(s) | 242, 365, 379 |
| Hin1I | GRCGYC | 1 cut(s) | 377 |
| Hin1II | CATG | 1 cut(s) | 221 |
| Hin6I | GCGC | 3 cut(s) | 240, 363, 377 |
| HinP1I | GCGC | 3 cut(s) | 240, 363, 377 |
| HincII | GTYRAC | 1 cut(s) | 34 |
| HindII | GTYRAC | 1 cut(s) | 34 |
| HindIII | AAGCTT | 1 cut(s) | 113 |
| HphI | GGTGA | 2 cut(s) | 131, 144 |
| Hpy166II | GTNNAC | 2 cut(s) | 34, 122 |
| Hpy188III | TCNNGA | 3 cut(s) | 188, 218, 278 |
| Hpy8I | GTNNAC | 2 cut(s) | 34, 122 |
| HpyAV | CCTTC | 2 cut(s) | 97, 194 |
| HpyCH4V | TGCA | 1 cut(s) | 139 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 303 |
| HpyF3I | CTNAG | 1 cut(s) | 276 |
| Hsp92I | GRCGYC | 1 cut(s) | 377 |
| Hsp92II | CATG | 1 cut(s) | 221 |
| HspAI | GCGC | 3 cut(s) | 240, 363, 377 |
| KasI | GGCGCC | 1 cut(s) | 376 |
| LmnI | GCTCC | 2 cut(s) | 32, 247 |
| LpnPI | CCDG | 5 cut(s) | 37, 173, 263, 339, 358 |
| MboII | GAAGA | 2 cut(s) | 47, 206 |
| Mly113I | GGCGCC | 1 cut(s) | 377 |
| MnlI | CCTC | 5 cut(s) | 96, 184, 260, 302, 343 |
| MseI | TTAA | 2 cut(s) | 228, 384 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 303 |
| NarI | GGCGCC | 1 cut(s) | 377 |
| NlaIII | CATG | 1 cut(s) | 221 |
| NlaIV | GGNNCC | 1 cut(s) | 378 |
| PagI | TCATGA | 1 cut(s) | 217 |
| PluTI | GGCGCC | 1 cut(s) | 380 |
| PspN4I | GGNNCC | 1 cut(s) | 378 |
| RsaI | GTAC | 1 cut(s) | 203 |
| RsaNI | GTAC | 1 cut(s) | 202 |
| SaqAI | TTAA | 2 cut(s) | 228, 384 |
| SetI | ASST | 8 cut(s) | 117, 136, 147, 234, 252, 271, 299, 313 |
| SfoI | GGCGCC | 1 cut(s) | 378 |
| SmlI | CTYRAG | 1 cut(s) | 298 |
| SmoI | CTYRAG | 1 cut(s) | 298 |
| SspDI | GGCGCC | 1 cut(s) | 376 |
| StyI | CCWWGG | 1 cut(s) | 253 |
| TaqI | TCGA | 1 cut(s) | 62 |
| TatI | WGTACW | 1 cut(s) | 201 |
| Tru1I | TTAA | 2 cut(s) | 228, 384 |
| Tru9I | TTAA | 2 cut(s) | 228, 384 |
| TspDTI | ATGAA | 2 cut(s) | 206, 234 |
| TspGWI | ACGGA | 2 cut(s) | 19, 139 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 188 |