transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 AT1G05710 |
| fragaria_vesca | FvH4_4g10460 FvH4_4g10460 FvH4_4g10460 |
| malus_domestica | MD04G1049000.v1.1 |
| prunus_persica | Prupe.1G207100_v2.0.a1 Prupe.1G207100_v2.0.a1 |
| pyrus_communis | pycom04g04320 |
| rosa_chinensis | RchiOBHm_Chr4g0405961 |
| rosa_laevigata | RLG00000008802 |
| rosa_multiflora | Rmu_sc0005593.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00350690 |
| rosa_rugosa | Rorug04G0064500 |
| rosa_samantha | Rh4AG135100 Rh4BG132100 Rh4CG142800 Rh4DG130000 |
| rosa_wichuraiana | Rw4G011010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 401, 421 |
| AfaI | GTAC | 1 cut(s) | 293 |
| AfeI | AGCGCT | 1 cut(s) | 241 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 325 |
| AluBI | AGCT | 4 cut(s) | 145, 176, 269, 297 |
| AluI | AGCT | 4 cut(s) | 145, 176, 269, 297 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 179 |
| Aor51HI | AGCGCT | 1 cut(s) | 241 |
| ApoI | RAATTY | 2 cut(s) | 401, 421 |
| AspLEI | GCGC | 1 cut(s) | 242 |
| AsuHPI | GGTGA | 1 cut(s) | 131 |
| BanII | GRGCYC | 1 cut(s) | 379 |
| BfoI | RGCGCY | 1 cut(s) | 243 |
| BmiI | GGNNCC | 1 cut(s) | 378 |
| BmsI | GCATC | 2 cut(s) | 68, 264 |
| BpmI | CTGGAG | 1 cut(s) | 209 |
| BpuEI | CTTGAG | 1 cut(s) | 319 |
| BsaWI | WCCGGW | 1 cut(s) | 325 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 325 |
| Bse1I | ACTGG | 1 cut(s) | 192 |
| Bse3DI | GCAATG | 1 cut(s) | 201 |
| BseGI | GGATG | 1 cut(s) | 286 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 325 |
| BseMI | GCAATG | 1 cut(s) | 201 |
| BseNI | ACTGG | 1 cut(s) | 192 |
| BsgI | GTGCAG | 1 cut(s) | 384 |
| Bsh1285I | CGRYCG | 1 cut(s) | 330 |
| BsiEI | CGRYCG | 1 cut(s) | 330 |
| BsiSI | CCGG | 1 cut(s) | 326 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 325 |
| Bsp1286I | GDGCHC | 1 cut(s) | 379 |
| BspHI | TCATGA | 1 cut(s) | 217 |
| BspLI | GGNNCC | 1 cut(s) | 378 |
| BsrDI | GCAATG | 1 cut(s) | 201 |
| BsrI | ACTGG | 1 cut(s) | 192 |
| Bst4CI | ACNGT | 1 cut(s) | 340 |
| BstC8I | GCNNGC | 1 cut(s) | 260 |
| BstDEI | CTNAG | 2 cut(s) | 63, 270 |
| BstF5I | GGATG | 1 cut(s) | 286 |
| BstH2I | RGCGCY | 1 cut(s) | 243 |
| BstHHI | GCGC | 1 cut(s) | 242 |
| BstMCI | CGRYCG | 1 cut(s) | 330 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 303 |
| BtsCI | GGATG | 1 cut(s) | 286 |
| BtsI | GCAGTG | 1 cut(s) | 49 |
| BtsIMutI | CAGTG | 1 cut(s) | 49 |
| Cac8I | GCNNGC | 1 cut(s) | 260 |
| CaiI | CAGNNNCTG | 1 cut(s) | 179 |
| CciI | TCATGA | 1 cut(s) | 217 |
| CfoI | GCGC | 1 cut(s) | 242 |
| Csp6I | GTAC | 1 cut(s) | 292 |
| CviAII | CATG | 2 cut(s) | 88, 218 |
| CviJI | RGCY | 7 cut(s) | 21, 134, 145, 176, 269, 297, 377 |
| CviKI_1 | RGCY | 7 cut(s) | 21, 134, 145, 176, 269, 297, 377 |
| CviQI | GTAC | 1 cut(s) | 292 |
| DdeI | CTNAG | 2 cut(s) | 63, 270 |
| Eco24I | GRGCYC | 1 cut(s) | 379 |
| Eco32I | GATATC | 1 cut(s) | 370 |
| Eco47III | AGCGCT | 1 cut(s) | 241 |
| EcoRV | GATATC | 1 cut(s) | 370 |
| EcoT38I | GRGCYC | 1 cut(s) | 379 |
| FaeI | CATG | 2 cut(s) | 91, 221 |
| FaiI | YATR | 8 cut(s) | 72, 89, 157, 159, 204, 206, 219, 247 |
| FatI | CATG | 2 cut(s) | 87, 217 |
| FauNDI | CATATG | 1 cut(s) | 157 |
| FokI | GGATG | 1 cut(s) | 273 |
| FriOI | GRGCYC | 1 cut(s) | 379 |
| GlaI | GCGC | 1 cut(s) | 241 |
| GsuI | CTGGAG | 1 cut(s) | 209 |
| HaeII | RGCGCY | 1 cut(s) | 243 |
| HapII | CCGG | 1 cut(s) | 326 |
| HhaI | GCGC | 1 cut(s) | 242 |
| Hin1II | CATG | 2 cut(s) | 91, 221 |
| Hin6I | GCGC | 1 cut(s) | 240 |
| HinP1I | GCGC | 1 cut(s) | 240 |
| HincII | GTYRAC | 2 cut(s) | 34, 93 |
| HindII | GTYRAC | 2 cut(s) | 34, 93 |
| HpaII | CCGG | 1 cut(s) | 326 |
| HphI | GGTGA | 1 cut(s) | 131 |
| Hpy166II | GTNNAC | 3 cut(s) | 34, 93, 122 |
| Hpy188III | TCNNGA | 1 cut(s) | 218 |
| Hpy8I | GTNNAC | 3 cut(s) | 34, 93, 122 |
| HpyAV | CCTTC | 1 cut(s) | 224 |
| HpyCH4III | ACNGT | 1 cut(s) | 340 |
| HpyCH4V | TGCA | 4 cut(s) | 59, 277, 336, 365 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 303 |
| HpyF3I | CTNAG | 2 cut(s) | 63, 270 |
| Hsp92II | CATG | 2 cut(s) | 91, 221 |
| HspAI | GCGC | 1 cut(s) | 240 |
| LmnI | GCTCC | 2 cut(s) | 247, 382 |
| LpnPI | CCDG | 5 cut(s) | 37, 173, 263, 339, 358 |
| LweI | GCATC | 2 cut(s) | 68, 264 |
| MaeIII | GTNAC | 2 cut(s) | 46, 412 |
| MhlI | GDGCHC | 1 cut(s) | 379 |
| MluCI | AATT | 4 cut(s) | 126, 281, 401, 421 |
| MmeI | TCCRAC | 1 cut(s) | 322 |
| MnlI | CCTC | 4 cut(s) | 184, 260, 302, 427 |
| MseI | TTAA | 1 cut(s) | 384 |
| MspI | CCGG | 1 cut(s) | 326 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 303 |
| NdeI | CATATG | 1 cut(s) | 157 |
| NlaIII | CATG | 2 cut(s) | 91, 221 |
| NlaIV | GGNNCC | 1 cut(s) | 378 |
| NmuCI | GTSAC | 1 cut(s) | 412 |
| PagI | TCATGA | 1 cut(s) | 217 |
| PspN4I | GGNNCC | 1 cut(s) | 378 |
| PstNI | CAGNNNCTG | 1 cut(s) | 179 |
| RsaI | GTAC | 1 cut(s) | 293 |
| RsaNI | GTAC | 1 cut(s) | 292 |
| SaqAI | TTAA | 1 cut(s) | 384 |
| SduI | GDGCHC | 1 cut(s) | 379 |
| SetI | ASST | 8 cut(s) | 147, 178, 234, 252, 271, 299, 313, 419 |
| SfaNI | GCATC | 2 cut(s) | 68, 264 |
| SmlI | CTYRAG | 1 cut(s) | 298 |
| SmoI | CTYRAG | 1 cut(s) | 298 |
| Sse9I | AATT | 4 cut(s) | 126, 281, 401, 421 |
| TaaI | ACNGT | 1 cut(s) | 340 |
| TaqI | TCGA | 1 cut(s) | 330 |
| TasI | AATT | 4 cut(s) | 126, 281, 401, 421 |
| Tru1I | TTAA | 1 cut(s) | 384 |
| Tru9I | TTAA | 1 cut(s) | 384 |
| TscAI | CASTG | 1 cut(s) | 49 |
| TseFI | GTSAC | 1 cut(s) | 412 |
| Tsp45I | GTSAC | 1 cut(s) | 412 |
| TspDTI | ATGAA | 2 cut(s) | 206, 234 |
| TspGWI | ACGGA | 1 cut(s) | 279 |
| TspRI | CASTG | 1 cut(s) | 49 |
| XapI | RAATTY | 2 cut(s) | 401, 421 |