Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0016009

Physical Location & Seq

Genomic Coordinates Reverse (-)

24746879 .. 24752465

Gene Structure 5587 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1159300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGGACGGCGGTGGATCTTGCTCCGGCGGAAATTTCAAGCTCTACGAGGAGCTGGAATTGCAGGAGTTTCAGGACCAGTTCGTGATCAAATCGGTCGCGGCTCCGGATCGAGGATTCTCCATCGACCACCGCGACGGCATCATTGAGCCGCTCAACGGCGATTCTTCTTCTTCTGTAAGTCCTTCGAAAACCTCGACGATATACGGAGTGGCGGGAACGATCAGATTGCTTGCAGGAAATTATGTGCTTGTAATAACTTCGCGGACGGAAGTCGGGAATTATCTCGGCTTTCCTGTTTACAGAGTAAACTCGATGAGGTTTCTGTCCTGCAATGAGGGTTTGAAGAATTCAACTGCTCAGGAGAAAAAAGACGAGGCTTACTTCATGGCTCTTTTGAAAACAGTCCAATCAACTCCGGGGTTGTACTTCTCGTACGAGACTGATATAACACTCAACTTTCAAAGACGATGTAAGTTAGTTGAAGGATGGATGGCCAAACCAATATGGAAGCAGGCTGACCCTCGATTTGTTTGGAACAGAAATCTTTTGGACGAACTGATTGAGTATAAGCTTGATGGGTTCATTATTCCTCTACTACAAGGAAATATCCTGAATTTACTGATTGCTTATACTGCAGAGCTAAAGCTAAAAGGCTCACCTGCCACACTTACGATAGTCTCAAGGAGGTGTACCCGACGTCTAGGGACAAGAATGTGGAGAAGAGGAGCGAATCTTGATGGAGATGTAGCGAATTTTATTGAAACTGAGCAGTTGGTGGAGATTGAAGGTTTCCAGTCCTCATTATTGCAGATTCGAGGTTCAATACCGCTTCTTTGGGAGCAAATAGTTGACTTGAGCTATAAACCACAACTTAGAATTATTGATCATGAGCAGACGTCAAATGTTGTGGAGCGTCATTTTTTTTATCTTTCCCAAAGATACGGAGAGACAATGGCAGTAGACCTAACTGATAAACATGGTGATGAAGGTCAATTAAGCATGGCATTTTCTGCTGAAATGAAAAATCTACCAAATGTGAGATACGTTTCATTTGACTTTCATCATGTATGTGGTAACTCAAACTTTGAAAACCTAAAGTTTCTATACGAGCAGATCTCGGAGCAATTTGAAAAGCAAGGATACTTCCTCGTAGATGCGAAGGGCAACATACTGGAGGAGCAGAAAGGAATTGTCAGAACAAACTGCATTGATTGCCTTGATAGAACAAATGTTACTCAGAGTTACTTGGCTCAGAAGTCTCTAGATGCACAGTTACAGAGAACTGGATTGCTGGATTCTTCTGAAAGCATTTCCATGTTTGCTGAAGATTATCAAACATTTAGAGCATTGTGGGCTGAGCAAGGTGATGAGATAAGCCTCGAGTATGCTGGCACTTATGCCCTGAAAGGGGACCTGGTTAGATACGGGAAGCAGACATTTGGAGGAATAATCAAAGATGGGATGAGTGCTCTTTCAAGATACTATTTGAATAACTTTCAGGATGGCATTCGGCAGGATGCTATGGATCTTGTCAGTGGCCGCTATACAGTCAGAAGGGATACTTCACCATTCCGGGCTGAATCTTTTTCTTTTCTACCGGTGGCATCAGCTTTGCTAATTGGAGGGTTGACACTGACATCCGTCACACTTCAGCAAGCTGGTCGAAATGCCCAGCAATATATGTCTTCTGTTCTTTTGGCTGGGGTGACTGCTGGAGTAGCGGTAGTGGTGAAAGCTAACGGAAGGCAATTCTGTTCGAGACCTCGCTTGTGCAGACTTGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0030258 GO:0031984 GO:0034596 GO:0042175 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043812 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0052744 GO:0052866 GO:0071704 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Syja_N

Protein Analysis

595

Amino Acids

66.85

Weight (kDa)

5.88

Isoelectric Point (pI)

41.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Syja_N	PF02383	68 - 357	1.3e-77	SacI homology domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0016009)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51830
fragaria_vesca	FvH4_6g11250
malus_domestica	MD04G1159300.v1.1
prunus_persica	Prupe.6G279500_v2.0.a1
pyrus_communis	pycom04g14090
rosa_chinensis	RchiOBHm_Chr3g0462771
rosa_laevigata	RLG00000024834
rosa_roxburghii	Rroxscaffold_6G00417220
rosa_rugosa	Rorug03G0059100 Rorug03G0059100
rosa_samantha	Rh3AG117100 Rh3BG120900 Rh3CG123800 Rh3DG122500
rosa_wichuraiana	Rw3G009920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	667
AatII	GACGTC	2 cut(s)	700, 899
Acc36I	ACCTGC	1 cut(s)	667
AccBSI	CCGCTC	1 cut(s)	151
AccI	GTMKAC	1 cut(s)	960
AccII	CGCG	3 cut(s)	98, 132, 262
AccIII	TCCGGA	1 cut(s)	103
AclWI	GGATC	3 cut(s)	22, 114, 1533
AcoI	YGGCCR	2 cut(s)	492, 1537
AcsI	RAATTY	4 cut(s)	31, 346, 613, 751
AcuI	CTGAAG	2 cut(s)	1344, 1634
AcyI	GRCGYC	2 cut(s)	697, 896
AfaI	GTAC	3 cut(s)	425, 434, 691
AfiI	CCNNNNNNNGG	4 cut(s)	110, 155, 1407, 1408
AgeI	ACCGGT	1 cut(s)	1597
AjnI	CCWGG	1 cut(s)	1413
AluBI	AGCT	9 cut(s)	40, 52, 571, 640, 646, 858, 1610, 1658, 1736
AluI	AGCT	9 cut(s)	40, 52, 571, 640, 646, 858, 1610, 1658, 1736
Alw21I	GWGCWC	1 cut(s)	1471
Alw26I	GTCTC	5 cut(s)	431, 682, 941, 1263, 1753
AlwI	GGATC	3 cut(s)	22, 114, 1533
Ama87I	CYCGRG	1 cut(s)	1379
Aor13HI	TCCGGA	1 cut(s)	103
AoxI	GGCC	2 cut(s)	492, 1537
ApoI	RAATTY	4 cut(s)	31, 346, 613, 751
ArsI	GACNNNNNNTTYG	2 cut(s)	509, 541
AsiGI	ACCGGT	1 cut(s)	1597
AspS9I	GGNCC	2 cut(s)	73, 1411
AsuC2I	CCSGG	2 cut(s)	417, 1574
AsuHPI	GGTGA	6 cut(s)	648, 992, 1376, 1557, 1717, 1741
AsuII	TTCGAA	1 cut(s)	185
AvaI	CYCGRG	1 cut(s)	1379
AvaII	GGWCC	2 cut(s)	73, 1411
BalI	TGGCCA	1 cut(s)	494
BbsI	GAAGAC	1 cut(s)	1677
Bbv12I	GWGCWC	1 cut(s)	1471
BccI	CCATC	7 cut(s)	128, 480, 484, 569, 731, 1451, 1496
BceAI	ACGGC	3 cut(s)	22, 151, 172
BcgI	CGANNNNNNTGC	4 cut(s)	208, 242, 1643, 1677
BciT130I	CCWGG	1 cut(s)	1415
BciVI	GTATCC	2 cut(s)	1133, 1552
BclI	TGATCA	2 cut(s)	84, 883
BcnI	CCSGG	2 cut(s)	417, 1574
BcoDI	GTCTC	5 cut(s)	431, 682, 941, 1263, 1753
BfaI	CTAG	2 cut(s)	701, 1262
BfmI	CTRYAG	1 cut(s)	633
BfuAI	ACCTGC	1 cut(s)	667
BfuI	GTATCC	2 cut(s)	1133, 1552
BglII	AGATCT	1 cut(s)	1113
BisI	GCNGC	3 cut(s)	99, 149, 1540
BlpI	GCTNAGC	1 cut(s)	1356
BlsI	GCNGC	3 cut(s)	100, 150, 1541
Bme1390I	CCNGG	3 cut(s)	417, 1415, 1574
Bme18I	GGWCC	2 cut(s)	73, 1411
BmeT110I	CYCGRG	1 cut(s)	1379
BmgT120I	GGNCC	2 cut(s)	73, 1411
BmiI	GGNNCC	2 cut(s)	102, 1412
BmrFI	CCNGG	3 cut(s)	417, 1415, 1574
BmsI	GCATC	5 cut(s)	147, 1144, 1255, 1507, 1613
BoxI	GACNNNNGTC	2 cut(s)	269, 1640
BpiI	GAAGAC	1 cut(s)	1677
BplI	GAGNNNNNCTC	2 cut(s)	1100, 1132
BpmI	CTGGAG	2 cut(s)	1193, 1734
Bpu10I	CCTNAGC	1 cut(s)	357
Bpu1102I	GCTNAGC	1 cut(s)	1356
Bpu14I	TTCGAA	1 cut(s)	185
BpuEI	CTTGAG	2 cut(s)	664, 874
BpuMI	CCSGG	2 cut(s)	417, 1574
BsaHI	GRCGYC	2 cut(s)	697, 896
BsaI	GGTCTC	1 cut(s)	1753
BsaJI	CCNNGG	1 cut(s)	416
BsaWI	WCCGGW	2 cut(s)	103, 1597
BsaXI	ACNNNNNCTCC	2 cut(s)	1707, 1737
Bsc4I	CCNNNNNNNGG	4 cut(s)	110, 155, 1407, 1408
Bse118I	RCCGGY	1 cut(s)	1597
Bse1I	ACTGG	4 cut(s)	76, 793, 1176, 1288
Bse3DI	GCAATG	1 cut(s)	337
BseAI	TCCGGA	1 cut(s)	103
BseBI	CCWGG	1 cut(s)	1415
BseDI	CCNNGG	1 cut(s)	416
BseGI	GGATG	6 cut(s)	491, 495, 1467, 1507, 1522, 1637
BseLI	CCNNNNNNNGG	4 cut(s)	110, 155, 1407, 1408
BseMI	GCAATG	1 cut(s)	337
BseMII	CTCAG	5 cut(s)	371, 756, 1250, 1265, 1347
BseNI	ACTGG	4 cut(s)	76, 793, 1176, 1288
BseRI	GAGGAG	3 cut(s)	62, 738, 1190
BseYI	CCCAGC	2 cut(s)	1671, 1700
Bsh1236I	CGCG	3 cut(s)	98, 132, 262
Bsh1285I	CGRYCG	1 cut(s)	96
BshFI	GGCC	2 cut(s)	494, 1539
BshTI	ACCGGT	1 cut(s)	1597
BsiEI	CGRYCG	1 cut(s)	96
BsiHKAI	GWGCWC	1 cut(s)	1471
BsiHKCI	CYCGRG	1 cut(s)	1379
BsiSI	CCGG	5 cut(s)	24, 104, 416, 1573, 1598
BsiWI	CGTACG	1 cut(s)	432
BslFI	GGGAC	2 cut(s)	718, 1424
BslI	CCNNNNNNNGG	4 cut(s)	110, 155, 1407, 1408
BsmAI	GTCTC	5 cut(s)	431, 682, 941, 1263, 1753
BsmFI	GGGAC	2 cut(s)	718, 1424
BsmI	GAATGC	1 cut(s)	1506
BsnI	GGCC	2 cut(s)	494, 1539
Bso31I	GGTCTC	1 cut(s)	1753
BsoBI	CYCGRG	1 cut(s)	1379
Bsp119I	TTCGAA	1 cut(s)	185
Bsp1286I	GDGCHC	1 cut(s)	1471
Bsp13I	TCCGGA	1 cut(s)	103
Bsp143I	GATC	7 cut(s)	14, 84, 106, 219, 883, 1113, 1525
Bsp1720I	GCTNAGC	1 cut(s)	1356
BspANI	GGCC	2 cut(s)	494, 1539
BspCNI	CTCAG	5 cut(s)	370, 757, 1249, 1264, 1348
BspEI	TCCGGA	1 cut(s)	103
BspFNI	CGCG	3 cut(s)	98, 132, 262
BspHI	TCATGA	1 cut(s)	886
BspLI	GGNNCC	2 cut(s)	102, 1412
BspMAI	CTGCAG	1 cut(s)	637
BspMI	ACCTGC	1 cut(s)	667
BspPI	GGATC	3 cut(s)	22, 114, 1533
BspT104I	TTCGAA	1 cut(s)	185
BspTNI	GGTCTC	1 cut(s)	1753
BsrBI	CCGCTC	1 cut(s)	151
BsrDI	GCAATG	1 cut(s)	337
BsrFI	RCCGGY	1 cut(s)	1597
BsrI	ACTGG	4 cut(s)	76, 793, 1176, 1288
BssAI	RCCGGY	1 cut(s)	1597
BssECI	CCNNGG	1 cut(s)	416
BssMI	GATC	7 cut(s)	14, 84, 106, 219, 883, 1113, 1525
BssNI	GRCGYC	2 cut(s)	697, 896
Bst2UI	CCWGG	1 cut(s)	1415
Bst4CI	ACNGT	3 cut(s)	403, 1272, 1549
Bst6I	CTCTTC	1 cut(s)	715
BstACI	GRCGYC	2 cut(s)	697, 896
BstAPI	GCANNNNNTGC	2 cut(s)	1010, 1212
BstBI	TTCGAA	1 cut(s)	185
BstC8I	GCNNGC	4 cut(s)	231, 513, 1390, 1656
BstDEI	CTNAG	6 cut(s)	357, 765, 872, 1236, 1251, 1356
BstF5I	GGATG	6 cut(s)	491, 495, 1467, 1507, 1522, 1637
BstFNI	CGCG	3 cut(s)	98, 132, 262
BstKTI	GATC	7 cut(s)	17, 87, 109, 222, 886, 1116, 1528
BstMAI	GTCTC	5 cut(s)	431, 682, 941, 1263, 1753
BstMBI	GATC	7 cut(s)	14, 84, 106, 219, 883, 1113, 1525
BstMCI	CGRYCG	1 cut(s)	96
BstMWI	GCNNNNNNNGC	6 cut(s)	58, 632, 1010, 1212, 1352, 1718
BstNI	CCWGG	1 cut(s)	1415
BstPAI	GACNNNNGTC	2 cut(s)	269, 1640
BstSCI	CCNGG	3 cut(s)	415, 1413, 1572
BstSFI	CTRYAG	1 cut(s)	633
BstUI	CGCG	3 cut(s)	98, 132, 262
BstV2I	GAAGAC	1 cut(s)	1677
BstX2I	RGATCY	3 cut(s)	14, 1113, 1525
BstYI	RGATCY	3 cut(s)	14, 1113, 1525
BsuI	GTATCC	2 cut(s)	1133, 1552
BsuRI	GGCC	2 cut(s)	494, 1539
BtsCI	GGATG	6 cut(s)	491, 495, 1467, 1507, 1522, 1637
BtsIMutI	CAGTG	2 cut(s)	1540, 1631
BveI	ACCTGC	1 cut(s)	667
Cac8I	GCNNGC	4 cut(s)	231, 513, 1390, 1656
CciI	TCATGA	1 cut(s)	886
Cfr10I	RCCGGY	1 cut(s)	1597
Cfr13I	GGNCC	2 cut(s)	73, 1411
CseI	GACGC	1 cut(s)	902
CsiI	ACCWGGT	1 cut(s)	1413
Csp6I	GTAC	3 cut(s)	424, 433, 690
CspAI	ACCGGT	1 cut(s)	1597
CspCI	CAANNNNNGTGG	2 cut(s)	888, 923
CviAII	CATG	6 cut(s)	385, 887, 977, 1000, 1064, 1315
CviQI	GTAC	3 cut(s)	424, 433, 690
DdeI	CTNAG	6 cut(s)	357, 765, 872, 1236, 1251, 1356
DpnI	GATC	7 cut(s)	16, 86, 108, 221, 885, 1115, 1527
DpnII	GATC	7 cut(s)	14, 84, 106, 219, 883, 1113, 1525
EaeI	YGGCCR	2 cut(s)	492, 1537
Eam1104I	CTCTTC	1 cut(s)	715
EarI	CTCTTC	1 cut(s)	715
EciI	GGCGGA	1 cut(s)	42
Eco31I	GGTCTC	1 cut(s)	1753
Eco47I	GGWCC	2 cut(s)	73, 1411
Eco57I	CTGAAG	2 cut(s)	1344, 1634
Eco88I	CYCGRG	1 cut(s)	1379
EcoO109I	RGGNCCY	1 cut(s)	1411
EcoRI	GAATTC	1 cut(s)	346
EcoRII	CCWGG	1 cut(s)	1413
FaeI	CATG	6 cut(s)	388, 890, 980, 1003, 1067, 1318
FalI	AAGNNNNNCTT	2 cut(s)	1546, 1578
FaqI	GGGAC	2 cut(s)	718, 1424
FatI	CATG	6 cut(s)	384, 886, 976, 999, 1063, 1314
FauI	CCCGC	1 cut(s)	205
FbaI	TGATCA	2 cut(s)	84, 883
FblI	GTMKAC	1 cut(s)	960
Fnu4HI	GCNGC	3 cut(s)	99, 149, 1540
FokI	GGATG	6 cut(s)	498, 502, 1474, 1514, 1529, 1624
Fsp4HI	GCNGC	3 cut(s)	99, 149, 1540
FspBI	CTAG	2 cut(s)	701, 1262
GluI	GCNGC	3 cut(s)	99, 149, 1540
GsaI	CCCAGC	2 cut(s)	1675, 1704
GsuI	CTGGAG	2 cut(s)	1193, 1734
HaeIII	GGCC	2 cut(s)	494, 1539
HapII	CCGG	5 cut(s)	24, 104, 416, 1573, 1598
HgaI	GACGC	1 cut(s)	902
Hin1I	GRCGYC	2 cut(s)	697, 896
Hin1II	CATG	6 cut(s)	388, 890, 980, 1003, 1067, 1318
HincII	GTYRAC	2 cut(s)	850, 1629
HindII	GTYRAC	2 cut(s)	850, 1629
HindIII	AAGCTT	1 cut(s)	569
HinfI	GANTC	6 cut(s)	114, 161, 730, 811, 1295, 1580
HpaII	CCGG	5 cut(s)	24, 104, 416, 1573, 1598
HphI	GGTGA	6 cut(s)	648, 992, 1376, 1557, 1717, 1741
Hpy166II	GTNNAC	6 cut(s)	298, 307, 690, 850, 961, 1629
Hpy188I	TCNGA	7 cut(s)	224, 1120, 1196, 1239, 1254, 1303, 1553
Hpy8I	GTNNAC	6 cut(s)	298, 307, 690, 850, 961, 1629
Hpy99I	CGWCG	3 cut(s)	137, 199, 699
HpyAV	CCTTC	7 cut(s)	192, 476, 779, 980, 1153, 1548, 1737
HpyCH4III	ACNGT	3 cut(s)	403, 1272, 1549
HpyCH4IV	ACGT	3 cut(s)	697, 896, 1044
HpyCH4V	TGCA	8 cut(s)	61, 233, 330, 635, 808, 1206, 1268, 1773
HpyF10VI	GCNNNNNNNGC	6 cut(s)	58, 632, 1010, 1212, 1352, 1718
HpyF3I	CTNAG	6 cut(s)	357, 765, 872, 1236, 1251, 1356
HpySE526I	ACGT	3 cut(s)	697, 896, 1044
Hsp92I	GRCGYC	2 cut(s)	697, 896
Hsp92II	CATG	6 cut(s)	388, 890, 980, 1003, 1067, 1318
Kpn2I	TCCGGA	1 cut(s)	103
Ksp22I	TGATCA	2 cut(s)	84, 883
Kzo9I	GATC	7 cut(s)	14, 84, 106, 219, 883, 1113, 1525
LmnI	GCTCC	8 cut(s)	26, 49, 106, 725, 838, 910, 1120, 1177
LweI	GCATC	5 cut(s)	147, 1144, 1255, 1507, 1613
MabI	ACCWGGT	1 cut(s)	1413
MaeI	CTAG	2 cut(s)	701, 1262
MaeII	ACGT	3 cut(s)	697, 896, 1044
MaeIII	GTNAC	6 cut(s)	1073, 1231, 1241, 1272, 1642, 1705
MalI	GATC	7 cut(s)	16, 86, 108, 221, 885, 1115, 1527
MbiI	CCGCTC	1 cut(s)	151
MboI	GATC	7 cut(s)	14, 84, 106, 219, 883, 1113, 1525
MboII	GAAGA	8 cut(s)	156, 159, 162, 355, 732, 1290, 1337, 1677
MflI	RGATCY	3 cut(s)	14, 1113, 1525
MhlI	GDGCHC	1 cut(s)	1471
MlsI	TGGCCA	1 cut(s)	494
MluNI	TGGCCA	1 cut(s)	494
Mox20I	TGGCCA	1 cut(s)	494
MroI	TCCGGA	1 cut(s)	103
MscI	TGGCCA	1 cut(s)	494
MseI	TTAA	1 cut(s)	995
MslI	CAYNNNNRTG	3 cut(s)	981, 1068, 1313
Msp20I	TGGCCA	1 cut(s)	494
MspI	CCGG	5 cut(s)	24, 104, 416, 1573, 1598
MspR9I	CCNGG	3 cut(s)	417, 1415, 1574
Mva1269I	GAATGC	1 cut(s)	1506
MvaI	CCWGG	1 cut(s)	1415
MvnI	CGCG	3 cut(s)	98, 132, 262
MwoI	GCNNNNNNNGC	6 cut(s)	58, 632, 1010, 1212, 1352, 1718
NciI	CCSGG	2 cut(s)	417, 1574
NdeII	GATC	7 cut(s)	14, 84, 106, 219, 883, 1113, 1525
NlaIII	CATG	6 cut(s)	388, 890, 980, 1003, 1067, 1318
NlaIV	GGNNCC	2 cut(s)	102, 1412
NmeAIII	GCCGAG	1 cut(s)	264
NmuCI	GTSAC	2 cut(s)	1642, 1705
NspV	TTCGAA	1 cut(s)	185
PaeR7I	CTCGAG	1 cut(s)	1379
PagI	TCATGA	1 cut(s)	886
PaqCI	CACCTGC	1 cut(s)	667
PcsI	WCGNNNNNNNCGW	2 cut(s)	129, 191
PctI	GAATGC	1 cut(s)	1506
PfeI	GAWTC	6 cut(s)	114, 161, 730, 811, 1295, 1580
Pfl23II	CGTACG	1 cut(s)	432
PinAI	ACCGGT	1 cut(s)	1597
PkrI	GCNGC	3 cut(s)	100, 150, 1541
PpuMI	RGGWCCY	1 cut(s)	1411
PshAI	GACNNNNGTC	2 cut(s)	269, 1640
Psp5II	RGGWCCY	1 cut(s)	1411
Psp6I	CCWGG	1 cut(s)	1413
PspFI	CCCAGC	2 cut(s)	1671, 1700
PspGI	CCWGG	1 cut(s)	1413
PspLI	CGTACG	1 cut(s)	432
PspN4I	GGNNCC	2 cut(s)	102, 1412
PspPI	GGNCC	2 cut(s)	73, 1411
PspPPI	RGGWCCY	1 cut(s)	1411
PspXI	VCTCGAGB	1 cut(s)	1379
PsrI	GAACNNNNNNTAC	2 cut(s)	1216, 1248
PstI	CTGCAG	1 cut(s)	637
PsuI	RGATCY	3 cut(s)	14, 1113, 1525
RsaI	GTAC	3 cut(s)	425, 434, 691
RsaNI	GTAC	3 cut(s)	424, 433, 690
RseI	CAYNNNNRTG	3 cut(s)	981, 1068, 1313
SaqAI	TTAA	1 cut(s)	995
SatI	GCNGC	3 cut(s)	99, 149, 1540
Sau3AI	GATC	7 cut(s)	14, 84, 106, 219, 883, 1113, 1525
Sau96I	GGNCC	2 cut(s)	73, 1411
ScrFI	CCNGG	3 cut(s)	417, 1415, 1574
SduI	GDGCHC	1 cut(s)	1471
SexAI	ACCWGGT	1 cut(s)	1413
SfaNI	GCATC	5 cut(s)	147, 1144, 1255, 1507, 1613
SfcI	CTRYAG	1 cut(s)	633
Sfr274I	CTCGAG	1 cut(s)	1379
SfuI	TTCGAA	1 cut(s)	185
SinI	GGWCC	2 cut(s)	73, 1411
SlaI	CTCGAG	1 cut(s)	1379
SmiMI	CAYNNNNRTG	3 cut(s)	981, 1068, 1313
SmlI	CTYRAG	3 cut(s)	679, 853, 1379
SmoI	CTYRAG	3 cut(s)	679, 853, 1379
SspMI	CTAG	2 cut(s)	701, 1262
StyD4I	CCNGG	3 cut(s)	415, 1413, 1572
TaaI	ACNGT	3 cut(s)	403, 1272, 1549
TaiI	ACGT	3 cut(s)	700, 899, 1047
TaqII	GACCGA	1 cut(s)	82
TatI	WGTACW	1 cut(s)	423
TauI	GCSGC	3 cut(s)	101, 151, 1542
TfiI	GAWTC	6 cut(s)	114, 161, 730, 811, 1295, 1580
Tru1I	TTAA	1 cut(s)	995
Tru9I	TTAA	1 cut(s)	995
TscAI	CASTG	2 cut(s)	1540, 1638
TseFI	GTSAC	2 cut(s)	1642, 1705
Tsp45I	GTSAC	2 cut(s)	1642, 1705
TspDTI	ATGAA	6 cut(s)	373, 571, 999, 1034, 1038, 1049
TspGWI	ACGGA	5 cut(s)	219, 281, 957, 1630, 1755
TspRI	CASTG	2 cut(s)	1540, 1638
VpaK11BI	GGWCC	2 cut(s)	73, 1411
XapI	RAATTY	4 cut(s)	31, 346, 613, 751
XbaI	TCTAGA	1 cut(s)	1261
XhoI	CTCGAG	1 cut(s)	1379
XmiI	GTMKAC	1 cut(s)	960
XspI	CTAG	2 cut(s)	701, 1262
ZraI	GACGTC	2 cut(s)	698, 897

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.