Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0016009

Physical Location & Seq

Genomic Coordinates Reverse (-)

39004404 .. 39009842

Gene Structure 5439 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00417220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGGACGGTGGATCTTCTTCTTCATCTGCCGGCGGAAACTTCAAGCTCTACGAGCAGTTGGAGTTGCAGGAGTTTCCGGACAAGTTCGTCGTCAAATCCGTCGAAGCTCCCGATCAAGGCTTCGTGATCGCCCGCCGCGACGGGACTATCGAACCGCTTGACGGTGATTCTTCTTCTGCAAGTCCCTCCAAAACGTCGACGATATATGGAGTCGTCGGAACGATCCGATTGCTTGCAGGAAATTACTTGCTTGTAATAACTTCTCGGATAGAAGTTGGGAACTATCTTGGCTTCCCTGTTTACCGGGTGACTTCTATGAAGTTTCTTTCCTGCAATGAGGTGTTGAAGCTCTCAACTGCTCAAGAAAAAAAAGATGAAGCTTACTTCATGGCTTTGTTGAAAACAGTCCAATCAACTCCAGGGCTGTACTTTTCATATGAAACAGATTTAACATTAAACTTTCAGAGAAGACGCAAGTTGATTGAAGGTTGGATGGCCAAACCATTATGGAAGCAGGCTGACCCTCGATTTGTTTGGAACAAAAATCTTTTAGATGAGCTTATTGAGTTCAAGACTACACAGTTGAAGTTAAAAGACTTGCCTGTCGCACTTACAATATTCTCAAGGAGGTGTACCCGTCGTCTAGGGACAAGAATGTGGAGAAGAGGAGCTAACCTTGAAGGAGATGTAGCTAACTTTATTGAAACCGAGCAATTGGCGGAGCTTGAAGGTTTCAAGTCCTCATTACTTCAGATTCGGGGTTCAATTCCACTTCTTTGGGAGCAAATTGTTGACTTGAGCTATAAACCAGGACTTAAAATTATTGACCATGAGCAGACGTCAAATGTAGTGGAGCGACACTTTCATGATCTTTTCCAAAGATATGGAGAGACAATAGCAGTAGACTTGACTGATAAACATGGTGATGAAGGTGAACTAAGCAAGGCATTTGCTAATGAGACACAAAATCTGCCAAACGTGAGATACGTTCCATTTGACTTCCATCATATATGTGGCAACTCAAATTTTGAAAACTTAAGGGTTTTATACGAGCAACTAGCAGAGCTATTTGAAAAGCAAGGATACTTTCTCGTTGATGCGGAAGGAACAATACTGGAGGACCAGAAAGGAATTGTCAGATCTAACTGCATCGACTGTCTCGATAGAACAAATGTCACCCAGAGTTACTTGGCTCAGAAGTGTCTGGATGCCCAGTTGCAGAGGATGGGAGTGCTTGATTCAACTGAGTCCATTTCTGTGTTTGATGAAGAGTATCAAAAATTCCGAACATCGTGGGCTGAGCATGGTGATGAGATAAGCCTCGAGTATGCTGGGACTTACGCCTTGAAAGGGGACCTAGTTAGGTATGGAAAACAGACATTTGGAGGAATGATTAGAGATGGGATGAGTGCTCTTTCAAGATATTATTTGAATAACTTTCAGGATGGTATTCGGCAGGATGCTGCTGATCTTATTAGTGGCCACTATACTGTTAGGAGGGATGGTTCAGTACGCCAGATGGAATCCTTTTCTTATCTACCGGTGGCATCAGCTTTGCTAATCGGAGGTTTAACACTGACATCTTTCACACTTCAGCAAGCGGGGCGAAACGCCCACCAATTTATGAGTTCTGTACTTTGGGCTGGAATGACTGCCGGATTAGCAGCAGTGGTGAAAGCTAATGGAAGACAGTTCTGTTCTAGACCTCGCTTGTGCAGACTTGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0016020 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0030258 GO:0031984 GO:0034596 GO:0042175 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043812 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046486 GO:0046488 GO:0046839 GO:0046856 GO:0052744 GO:0052866 GO:0071704 GO:0098827

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Syja_N

Protein Analysis

575

Amino Acids

64.94

Weight (kDa)

5.97

Isoelectric Point (pI)

40.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Syja_N	PF02383	69 - 338	2.6e-68	SacI homology domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016009)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51830
fragaria_vesca	FvH4_6g11250
malus_domestica	MD04G1159300.v1.1
prunus_persica	Prupe.6G279500_v2.0.a1
pyrus_communis	pycom04g14090
rosa_chinensis	RchiOBHm_Chr3g0462771
rosa_laevigata	RLG00000024834
rosa_roxburghii	Rroxscaffold_6G00417220
rosa_rugosa	Rorug03G0059100 Rorug03G0059100
rosa_samantha	Rh3AG117100 Rh3BG120900 Rh3CG123800 Rh3DG122500
rosa_wichuraiana	Rw3G009920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	86, 602
AatII	GACGTC	1 cut(s)	842
AccI	GTMKAC	2 cut(s)	197, 903
AccII	CGCG	1 cut(s)	138
AccIII	TCCGGA	1 cut(s)	76
AciI	CCGC	7 cut(s)	33, 133, 136, 155, 719, 1100, 1601
AclWI	GGATC	2 cut(s)	19, 217
AcoI	YGGCCR	2 cut(s)	495, 1480
AcsI	RAATTY	2 cut(s)	1024, 1280
AcuI	CTGAAG	2 cut(s)	734, 1577
AcyI	GRCGYC	1 cut(s)	839
AfaI	GTAC	4 cut(s)	428, 634, 1512, 1635
AfiI	CCNNNNNNNGG	3 cut(s)	116, 161, 1350
AflII	CTTAAG	1 cut(s)	1036
AgeI	ACCGGT	1 cut(s)	1540
AjnI	CCWGG	2 cut(s)	418, 808
AloI	GAACNNNNNNTCC	2 cut(s)	1489, 1521
Alw21I	GWGCWC	1 cut(s)	1414
Alw26I	GTCTC	3 cut(s)	884, 953, 1163
AlwI	GGATC	2 cut(s)	19, 217
Ama87I	CYCGRG	1 cut(s)	1322
Aor13HI	TCCGGA	1 cut(s)	76
AoxI	GGCC	2 cut(s)	495, 1480
ApeKI	GCWGC	2 cut(s)	1463, 1664
ApoI	RAATTY	2 cut(s)	1024, 1280
ArsI	GACNNNNNNTTYG	2 cut(s)	512, 544
AsiGI	ACCGGT	1 cut(s)	1540
AspS9I	GGNCC	2 cut(s)	1120, 1354
AsuC2I	CCSGG	1 cut(s)	305
AsuHPI	GGTGA	7 cut(s)	176, 319, 935, 944, 1168, 1319, 1684
AvaI	CYCGRG	1 cut(s)	1322
AvaII	GGWCC	2 cut(s)	1120, 1354
BalI	TGGCCA	2 cut(s)	497, 1482
BarI	GAAGNNNNNNTAC	2 cut(s)	1095, 1127
BbsI	GAAGAC	2 cut(s)	475, 1693
Bbv12I	GWGCWC	1 cut(s)	1414
BbvI	GCAGC	2 cut(s)	1450, 1676
BccI	CCATC	7 cut(s)	487, 1011, 1219, 1394, 1439, 1496, 1513
BcgI	CGANNNNNNTGC	2 cut(s)	211, 245
BciT130I	CCWGG	2 cut(s)	420, 810
BciVI	GTATCC	1 cut(s)	1076
BcnI	CCSGG	1 cut(s)	305
BcoDI	GTCTC	3 cut(s)	884, 953, 1163
BfaI	CTAG	4 cut(s)	644, 1058, 1358, 1701
BfrI	CTTAAG	1 cut(s)	1036
BfuI	GTATCC	1 cut(s)	1076
BglII	AGATCT	1 cut(s)	1139
BisI	GCNGC	3 cut(s)	136, 1464, 1665
BlpI	GCTNAGC	1 cut(s)	1299
BlsI	GCNGC	3 cut(s)	137, 1465, 1666
Bme1390I	CCNGG	3 cut(s)	305, 420, 810
Bme18I	GGWCC	2 cut(s)	1120, 1354
BmeT110I	CYCGRG	1 cut(s)	1322
BmgT120I	GGNCC	2 cut(s)	1120, 1354
BmiI	GGNNCC	1 cut(s)	1355
BmrFI	CCNGG	3 cut(s)	305, 420, 810
BmrI	ACTGGG	1 cut(s)	1207
BmsI	GCATC	5 cut(s)	1087, 1158, 1198, 1450, 1556
BmuI	ACTGGG	1 cut(s)	1207
BpiI	GAAGAC	2 cut(s)	475, 1693
BpmI	CTGGAG	2 cut(s)	402, 1136
Bpu1102I	GCTNAGC	1 cut(s)	1299
BpuEI	CTTGAG	3 cut(s)	345, 607, 817
BpuMI	CCSGG	1 cut(s)	305
BsaHI	GRCGYC	1 cut(s)	839
BsaJI	CCNNGG	1 cut(s)	419
BsaWI	WCCGGW	2 cut(s)	76, 1540
BsaXI	ACNNNNNCTCC	2 cut(s)	1489, 1519
Bsc4I	CCNNNNNNNGG	3 cut(s)	116, 161, 1350
Bse118I	RCCGGY	2 cut(s)	29, 1540
Bse1I	ACTGG	2 cut(s)	1119, 1213
Bse3DI	GCAATG	1 cut(s)	340
BseAI	TCCGGA	1 cut(s)	76
BseBI	CCWGG	2 cut(s)	420, 810
BseDI	CCNNGG	1 cut(s)	419
BseGI	GGATG	7 cut(s)	498, 1213, 1230, 1410, 1450, 1465, 1507
BseLI	CCNNNNNNNGG	3 cut(s)	116, 161, 1350
BseMI	GCAATG	1 cut(s)	340
BseMII	CTCAG	3 cut(s)	1208, 1236, 1290
BseNI	ACTGG	2 cut(s)	1119, 1213
BseRI	GAGGAG	1 cut(s)	681
BseXI	GCAGC	2 cut(s)	1450, 1676
BseYI	CCCAGC	1 cut(s)	1331
Bsh1236I	CGCG	1 cut(s)	138
BshFI	GGCC	2 cut(s)	497, 1482
BshTI	ACCGGT	1 cut(s)	1540
BsiHKAI	GWGCWC	1 cut(s)	1414
BsiHKCI	CYCGRG	1 cut(s)	1322
BsiSI	CCGG	5 cut(s)	30, 77, 304, 1541, 1656
BslFI	GGGAC	5 cut(s)	157, 168, 661, 1348, 1367
BslI	CCNNNNNNNGG	3 cut(s)	116, 161, 1350
BsmAI	GTCTC	3 cut(s)	884, 953, 1163
BsmFI	GGGAC	5 cut(s)	157, 168, 661, 1348, 1367
BsnI	GGCC	2 cut(s)	497, 1482
BsoBI	CYCGRG	1 cut(s)	1322
Bsp1286I	GDGCHC	1 cut(s)	1414
Bsp13I	TCCGGA	1 cut(s)	76
Bsp143I	GATC	7 cut(s)	11, 112, 126, 222, 868, 1139, 1468
Bsp1720I	GCTNAGC	1 cut(s)	1299
BspACI	CCGC	7 cut(s)	33, 133, 136, 155, 719, 1100, 1601
BspANI	GGCC	2 cut(s)	497, 1482
BspCNI	CTCAG	3 cut(s)	1207, 1237, 1291
BspEI	TCCGGA	1 cut(s)	76
BspFNI	CGCG	1 cut(s)	138
BspHI	TCATGA	1 cut(s)	865
BspLI	GGNNCC	1 cut(s)	1355
BspPI	GGATC	2 cut(s)	19, 217
BspTI	CTTAAG	1 cut(s)	1036
BsrDI	GCAATG	1 cut(s)	340
BsrFI	RCCGGY	2 cut(s)	29, 1540
BsrI	ACTGG	2 cut(s)	1119, 1213
BssAI	RCCGGY	2 cut(s)	29, 1540
BssECI	CCNNGG	1 cut(s)	419
BssMI	GATC	7 cut(s)	11, 112, 126, 222, 868, 1139, 1468
BssNI	GRCGYC	1 cut(s)	839
Bst2UI	CCWGG	2 cut(s)	420, 810
Bst4CI	ACNGT	7 cut(s)	8, 164, 406, 582, 1157, 1492, 1692
Bst6I	CTCTTC	2 cut(s)	658, 1263
BstACI	GRCGYC	1 cut(s)	839
BstAFI	CTTAAG	1 cut(s)	1036
BstC8I	GCNNGC	5 cut(s)	31, 133, 234, 516, 1599
BstDEI	CTNAG	4 cut(s)	938, 1194, 1245, 1299
BstF5I	GGATG	7 cut(s)	498, 1213, 1230, 1410, 1450, 1465, 1507
BstFNI	CGCG	1 cut(s)	138
BstKTI	GATC	7 cut(s)	14, 115, 129, 225, 871, 1142, 1471
BstMAI	GTCTC	3 cut(s)	884, 953, 1163
BstMBI	GATC	7 cut(s)	11, 112, 126, 222, 868, 1139, 1468
BstMWI	GCNNNNNNNGC	3 cut(s)	52, 1603, 1661
BstNI	CCWGG	2 cut(s)	420, 810
BstSCI	CCNGG	3 cut(s)	303, 418, 808
BstUI	CGCG	1 cut(s)	138
BstV1I	GCAGC	2 cut(s)	1450, 1676
BstV2I	GAAGAC	2 cut(s)	475, 1693
BstX2I	RGATCY	2 cut(s)	11, 1139
BstXI	CCANNNNNNTGG	2 cut(s)	777, 884
BstYI	RGATCY	2 cut(s)	11, 1139
BsuI	GTATCC	1 cut(s)	1076
BsuRI	GGCC	2 cut(s)	497, 1482
BtsCI	GGATG	7 cut(s)	498, 1213, 1230, 1410, 1450, 1465, 1507
BtsI	GCAGTG	1 cut(s)	1674
BtsIMutI	CAGTG	2 cut(s)	1574, 1674
Cac8I	GCNNGC	5 cut(s)	31, 133, 234, 516, 1599
CciI	TCATGA	1 cut(s)	865
Cfr10I	RCCGGY	2 cut(s)	29, 1540
Cfr13I	GGNCC	2 cut(s)	1120, 1354
CseI	GACGC	1 cut(s)	480
Csp6I	GTAC	4 cut(s)	427, 633, 1511, 1634
CspAI	ACCGGT	1 cut(s)	1540
CspCI	CAANNNNNGTGG	2 cut(s)	831, 866
CviAII	CATG	5 cut(s)	388, 830, 866, 920, 1304
CviQI	GTAC	4 cut(s)	427, 633, 1511, 1634
DdeI	CTNAG	4 cut(s)	938, 1194, 1245, 1299
DpnI	GATC	7 cut(s)	13, 114, 128, 224, 870, 1141, 1470
DpnII	GATC	7 cut(s)	11, 112, 126, 222, 868, 1139, 1468
DrdI	GACNNNNNNGTC	2 cut(s)	86, 602
DseDI	GACNNNNNNGTC	2 cut(s)	86, 602
EaeI	YGGCCR	2 cut(s)	495, 1480
Eam1104I	CTCTTC	2 cut(s)	658, 1263
EarI	CTCTTC	2 cut(s)	658, 1263
EciI	GGCGGA	2 cut(s)	48, 734
Eco47I	GGWCC	2 cut(s)	1120, 1354
Eco57I	CTGAAG	2 cut(s)	734, 1577
Eco88I	CYCGRG	1 cut(s)	1322
EcoO109I	RGGNCCY	1 cut(s)	1354
EcoRII	CCWGG	2 cut(s)	418, 808
FaeI	CATG	5 cut(s)	391, 833, 869, 923, 1307
FaqI	GGGAC	5 cut(s)	157, 168, 661, 1348, 1367
FatI	CATG	5 cut(s)	387, 829, 865, 919, 1303
FauI	CCCGC	2 cut(s)	140, 1594
FauNDI	CATATG	1 cut(s)	436
FblI	GTMKAC	2 cut(s)	197, 903
Fnu4HI	GCNGC	3 cut(s)	136, 1464, 1665
FokI	GGATG	7 cut(s)	505, 1220, 1237, 1417, 1457, 1472, 1514
Fsp4HI	GCNGC	3 cut(s)	136, 1464, 1665
FspBI	CTAG	4 cut(s)	644, 1058, 1358, 1701
GluI	GCNGC	3 cut(s)	136, 1464, 1665
GsaI	CCCAGC	1 cut(s)	1335
GsuI	CTGGAG	2 cut(s)	402, 1136
HaeIII	GGCC	2 cut(s)	497, 1482
HapII	CCGG	5 cut(s)	30, 77, 304, 1541, 1656
HgaI	GACGC	1 cut(s)	480
Hin1I	GRCGYC	1 cut(s)	839
Hin1II	CATG	5 cut(s)	391, 833, 869, 923, 1307
HincII	GTYRAC	2 cut(s)	198, 793
HindII	GTYRAC	2 cut(s)	198, 793
HindIII	AAGCTT	1 cut(s)	378
HinfI	GANTC	6 cut(s)	167, 210, 754, 1238, 1247, 1523
HpaII	CCGG	5 cut(s)	30, 77, 304, 1541, 1656
HphI	GGTGA	7 cut(s)	176, 319, 935, 944, 1168, 1319, 1684
Hpy166II	GTNNAC	6 cut(s)	198, 301, 633, 793, 904, 935
Hpy188I	TCNGA	9 cut(s)	218, 227, 267, 465, 753, 1139, 1197, 1286, 1565
Hpy8I	GTNNAC	6 cut(s)	198, 301, 633, 793, 904, 935
Hpy99I	CGWCG	7 cut(s)	92, 104, 143, 199, 202, 218, 642
HpyAV	CCTTC	5 cut(s)	479, 674, 722, 923, 1097
HpyCH4III	ACNGT	7 cut(s)	8, 164, 406, 582, 1157, 1492, 1692
HpyCH4IV	ACGT	4 cut(s)	194, 839, 978, 987
HpyCH4V	TGCA	7 cut(s)	67, 179, 236, 333, 1149, 1219, 1716
HpyF10VI	GCNNNNNNNGC	3 cut(s)	52, 1603, 1661
HpyF3I	CTNAG	4 cut(s)	938, 1194, 1245, 1299
HpySE526I	ACGT	4 cut(s)	194, 839, 978, 987
Hsp92I	GRCGYC	1 cut(s)	839
Hsp92II	CATG	5 cut(s)	391, 833, 869, 923, 1307
Kpn2I	TCCGGA	1 cut(s)	76
KroI	GCCGGC	1 cut(s)	29
KroNI	GCCGGC	1 cut(s)	31
Kzo9I	GATC	7 cut(s)	11, 112, 126, 222, 868, 1139, 1468
LmnI	GCTCC	5 cut(s)	112, 668, 721, 781, 853
Lsp1109I	GCAGC	2 cut(s)	1450, 1676
LweI	GCATC	5 cut(s)	1087, 1158, 1198, 1450, 1556
MaeI	CTAG	4 cut(s)	644, 1058, 1358, 1701
MaeII	ACGT	4 cut(s)	194, 839, 978, 987
MaeIII	GTNAC	3 cut(s)	307, 1174, 1184
MalI	GATC	7 cut(s)	13, 114, 128, 224, 870, 1141, 1470
MboI	GATC	7 cut(s)	11, 112, 126, 222, 868, 1139, 1468
MboII	GAAGA	9 cut(s)	6, 9, 12, 162, 165, 480, 675, 1280, 1698
MfeI	CAATTG	1 cut(s)	713
MflI	RGATCY	2 cut(s)	11, 1139
MhlI	GDGCHC	1 cut(s)	1414
MlsI	TGGCCA	2 cut(s)	497, 1482
MluCI	AATT	9 cut(s)	241, 713, 765, 786, 819, 1024, 1131, 1280, 1619
MluNI	TGGCCA	2 cut(s)	497, 1482
MlyI	GAGTC	2 cut(s)	219, 1256
MmeI	TCCRAC	3 cut(s)	39, 196, 470
Mox20I	TGGCCA	2 cut(s)	497, 1482
MroI	TCCGGA	1 cut(s)	76
MroNI	GCCGGC	1 cut(s)	29
MscI	TGGCCA	2 cut(s)	497, 1482
MseI	TTAA	6 cut(s)	449, 455, 590, 816, 1037, 1571
MslI	CAYNNNNRTG	5 cut(s)	864, 924, 1011, 1256, 1308
Msp20I	TGGCCA	2 cut(s)	497, 1482
MspCI	CTTAAG	1 cut(s)	1036
MspI	CCGG	5 cut(s)	30, 77, 304, 1541, 1656
MspR9I	CCNGG	3 cut(s)	305, 420, 810
MunI	CAATTG	1 cut(s)	713
MvaI	CCWGG	2 cut(s)	420, 810
MvnI	CGCG	1 cut(s)	138
MwoI	GCNNNNNNNGC	3 cut(s)	52, 1603, 1661
NaeI	GCCGGC	1 cut(s)	31
NciI	CCSGG	1 cut(s)	305
NdeI	CATATG	1 cut(s)	436
NdeII	GATC	7 cut(s)	11, 112, 126, 222, 868, 1139, 1468
NgoMIV	GCCGGC	1 cut(s)	29
NlaIII	CATG	5 cut(s)	391, 833, 869, 923, 1307
NlaIV	GGNNCC	1 cut(s)	1355
NmuCI	GTSAC	2 cut(s)	307, 1174
PaeR7I	CTCGAG	1 cut(s)	1322
PagI	TCATGA	1 cut(s)	865
PcsI	WCGNNNNNNNCGW	6 cut(s)	96, 108, 135, 147, 984, 1158
PdiI	GCCGGC	1 cut(s)	31
PfeI	GAWTC	4 cut(s)	167, 754, 1238, 1523
PinAI	ACCGGT	1 cut(s)	1540
PkrI	GCNGC	3 cut(s)	137, 1465, 1666
PleI	GAGTC	2 cut(s)	218, 1255
PpsI	GAGTC	2 cut(s)	218, 1255
PpuMI	RGGWCCY	1 cut(s)	1354
Psp5II	RGGWCCY	1 cut(s)	1354
Psp6I	CCWGG	2 cut(s)	418, 808
PspFI	CCCAGC	1 cut(s)	1331
PspGI	CCWGG	2 cut(s)	418, 808
PspN4I	GGNNCC	1 cut(s)	1355
PspPI	GGNCC	2 cut(s)	1120, 1354
PspPPI	RGGWCCY	1 cut(s)	1354
PspXI	VCTCGAGB	1 cut(s)	1322
PsuI	RGATCY	2 cut(s)	11, 1139
RsaI	GTAC	4 cut(s)	428, 634, 1512, 1635
RsaNI	GTAC	4 cut(s)	427, 633, 1511, 1634
RseI	CAYNNNNRTG	5 cut(s)	864, 924, 1011, 1256, 1308
SalI	GTCGAC	1 cut(s)	196
SaqAI	TTAA	6 cut(s)	449, 455, 590, 816, 1037, 1571
SatI	GCNGC	3 cut(s)	136, 1464, 1665
Sau3AI	GATC	7 cut(s)	11, 112, 126, 222, 868, 1139, 1468
Sau96I	GGNCC	2 cut(s)	1120, 1354
SchI	GAGTC	2 cut(s)	219, 1256
ScrFI	CCNGG	3 cut(s)	305, 420, 810
SduI	GDGCHC	1 cut(s)	1414
SfaNI	GCATC	5 cut(s)	1087, 1158, 1198, 1450, 1556
Sfr274I	CTCGAG	1 cut(s)	1322
SgrDI	CGTCGACG	1 cut(s)	196
SinI	GGWCC	2 cut(s)	1120, 1354
SlaI	CTCGAG	1 cut(s)	1322
SmiMI	CAYNNNNRTG	5 cut(s)	864, 924, 1011, 1256, 1308
SmlI	CTYRAG	5 cut(s)	360, 622, 796, 1036, 1322
SmoI	CTYRAG	5 cut(s)	360, 622, 796, 1036, 1322
Sse9I	AATT	9 cut(s)	241, 713, 765, 786, 819, 1024, 1131, 1280, 1619
SsiI	CCGC	7 cut(s)	33, 133, 136, 155, 719, 1100, 1601
SspI	AATATT	1 cut(s)	618
SspMI	CTAG	4 cut(s)	644, 1058, 1358, 1701
StyD4I	CCNGG	3 cut(s)	303, 418, 808
TaaI	ACNGT	7 cut(s)	8, 164, 406, 582, 1157, 1492, 1692
TaiI	ACGT	4 cut(s)	197, 842, 981, 990
TaqI	TCGA	7 cut(s)	102, 150, 197, 526, 1152, 1161, 1323
TasI	AATT	9 cut(s)	241, 713, 765, 786, 819, 1024, 1131, 1280, 1619
TatI	WGTACW	2 cut(s)	426, 1633
TauI	GCSGC	1 cut(s)	138
TfiI	GAWTC	4 cut(s)	167, 754, 1238, 1523
Tru1I	TTAA	6 cut(s)	449, 455, 590, 816, 1037, 1571
Tru9I	TTAA	6 cut(s)	449, 455, 590, 816, 1037, 1571
TscAI	CASTG	2 cut(s)	1581, 1674
TseFI	GTSAC	2 cut(s)	307, 1174
TseI	GCWGC	2 cut(s)	1463, 1664
Tsp45I	GTSAC	2 cut(s)	307, 1174
TspDTI	ATGAA	9 cut(s)	12, 332, 376, 390, 423, 453, 854, 942, 1281
TspGWI	ACGGA	1 cut(s)	88
TspRI	CASTG	2 cut(s)	1581, 1674
Vha464I	CTTAAG	1 cut(s)	1036
VpaK11BI	GGWCC	2 cut(s)	1120, 1354
XapI	RAATTY	2 cut(s)	1024, 1280
XbaI	TCTAGA	1 cut(s)	1700
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1010
XhoI	CTCGAG	1 cut(s)	1322
XmiI	GTMKAC	2 cut(s)	197, 903
XspI	CTAG	4 cut(s)	644, 1058, 1358, 1701
ZraI	GACGTC	1 cut(s)	840

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.