Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0011570

Physical Location & Seq

Genomic Coordinates Reverse (-)

29919981 .. 29931264

Gene Structure 11284 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1216700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGTTACATGTATACACAGGTATGTATAAGAACCAATTGCAAGAGTTAGCGCAGAGAAGTTGCTTCAATTTGCCATCTTATTCATGCATTCGGGAAGGACCAGATCATGCTCCTCGATTCAAAGCAACTGTCAACTTCAATGGAGATACTTTTGAAAGTCCTACATTCTGTCCTACTCTTAGACAGGCCGAGCATGCTGCAGCGGAGGTAGCATTGAACACACTTGCAAAAAGAGGCCCTTCCAGAGCACTAGCTGCAAGAGTATTGGATGAAACGGGGGTTTACAAGAACTTGCTTCAGGAGACTGCTCACAGAGCTGGATTGAACCTTCCTGTTTATACAACTGTTCGATCTGGACCTGGCCATGTGCCTGTGTTCTCATGTACAGTTGAGCTAGCAGGAATGAGCTTTACGGGGCAACCGGCTAGGACAAAGAAACAAGCTCAGAAAAATGCTGCAACTGCTGCTTGGGCAGCCCTGAAAAGATTGGCTCAACGTGGCTCGTCTTCTTCCTCGGTGGAGCCTAGAGGCAATGAAGAACAGGAACAAGTCATTATTGCTCGTATTCTTGGAAGTTTGCGGCCGTCTGAGTCTATTAATACTCAAAATGATTGCCGACATGGACAGCAAACATACATTCCCATCTTCCAGAAATCTACCCTGCCAACACCAAGCTTATATCCTATGCAATTCCATAACTGGGGTTATTCTAATTATTCCCCTGAAATAGGAATGTACGGATTGTGGCGGGAAGAGCAACTATTACAGCAACAAAATCGCCTGCTGGCGCTTCCTATTTTACCAGTTTCTCCATCTGTTCCTCAGATATTTCCATTTATGCAATCCGTGCTTCGCCCAGATAACTGTCTATACTTTCCAGCAAGAGGGCAAGAGTCGACCTCTGCGGGACCCAGAATTACAATTGCTACCTCAGGCCCTTCATTTTGCTTCTCAAACCATTTGGTTCCTAGCCCGCCGATGAGGGGCAAGTCCACGGTGACTATTCAAGAGATACAGGAAGAAAAGCCAGAAGAATCACCCAGGTACTCTCCTTCTATAGTTTCAGATCCCTTTAGTCCCGCAAGCAGCGGCGCTGAAGTAAGAGTCCAGGAACAAGTTCAGCATGAGAAACAGAACCTAGGAGAGTTAGAAAGCAAAATTGGAAACCTTCAGCTGGAATGCAACAACCCAACTGGGCAATCCGGACATGCTCACCCTAGAATCGTGGATTCTAGTTTTAGGCCAGTGGACTTAAGGTTACAAAATCCTCGTGGTTTCGAATCTTGTAGGCCCAATTTGAGGCCCCAAAATCCACCAAGAGTAAGTAGTGCTAGAAGTCTAAGGCCGCCATCTGCTGCAGAACCTGTAATAATCAGAACTGTAAGGCCCTCTTCTTCTCCGGGGTCTAGACCACAAAATTTTCCAAGCAGGAATCCTGCTCCGCCAAGAATGAGAACCGGGATCCCCTCATCTTCAGCCGCGCAATTGCCTGAAAGAATGCAACTGGGAGGACTACGACCTAGCTTCATGGCACCAGCTGTTCGAATTAGATCAGTTGTACCAGTTTGTTCAGCCCCACCAGCAAGAAAAATGTCAAGTTCCAGCCGGGAGAGAGTGTTACCGGAGATGGAGAAGAAGGATACTAATCAAGACGACGTGCCAAAAGAAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

dsrm

Protein Analysis

558

Amino Acids

61.41

Weight (kDa)

9.58

Isoelectric Point (pI)

68.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
dsrm	PF00035	9 - 75	1.2e-14	Double-stranded RNA binding motif
dsrm	PF00035	95 - 159	3e-15	Double-stranded RNA binding motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011570)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g04080 FvH4_6g04080 FvH4_6g04080
malus_domestica	MD04G1216700.v1.1 MD12G1233300.v1.1
prunus_persica	Prupe.6G336400_v2.0.a1
pyrus_communis	pycom04g19270 pycom12g21580
rosa_chinensis	RchiOBHm_Chr3g0452631
rosa_laevigata	RLG00000006117 RLG00000025860
rosa_multiflora	Rmu_sc0030581.1_g000001
rosa_roxburghii	Rroxscaffold_6G00429670
rosa_rugosa	Rorug02G0642000 Rorug02G0642100
rosa_samantha	Rh3AG044400 Rh3BG046700 Rh3CG045200 Rh3DG045600
rosa_wichuraiana	Rw3G003460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1531
AccI	GTMKAC	2 cut(s)	12, 896
AccII	CGCG	1 cut(s)	1481
AccIII	TCCGGA	1 cut(s)	1202
AclWI	GGATC	3 cut(s)	1061, 1456, 1469
AcoI	YGGCCR	2 cut(s)	361, 581
AcsI	RAATTY	1 cut(s)	1417
AcuI	CTGAAG	4 cut(s)	281, 1116, 1154, 1458
AfaI	GTAC	4 cut(s)	385, 737, 1046, 1560
AfiI	CCNNNNNNNGG	6 cut(s)	700, 728, 884, 983, 1174, 1299
AflII	CTTAAG	1 cut(s)	1252
AflIII	ACRYGT	1 cut(s)	7
AgsI	TTSAA	7 cut(s)	67, 121, 139, 155, 217, 325, 1007
AjiI	CACGTC	1 cut(s)	1657
AjnI	CCWGG	3 cut(s)	358, 1040, 1107
AjuI	GAANNNNNNNTTGG	2 cut(s)	1143, 1175
AluBI	AGCT	9 cut(s)	254, 317, 394, 408, 443, 675, 1174, 1524, 1538
AluI	AGCT	9 cut(s)	254, 317, 394, 408, 443, 675, 1174, 1524, 1538
Alw21I	GWGCWC	1 cut(s)	250
Alw26I	GTCTC	1 cut(s)	296
AlwI	GGATC	3 cut(s)	1061, 1456, 1469
AlwNI	CAGNNNCTG	1 cut(s)	1364
Aor13HI	TCCGGA	1 cut(s)	1202
ApeKI	GCWGC	8 cut(s)	197, 200, 254, 455, 464, 473, 1086, 1355
ApoI	RAATTY	1 cut(s)	1417
ArsI	GACNNNNNNTTYG	2 cut(s)	114, 146
AseI	ATTAAT	1 cut(s)	597
Asp700I	GAANNNNTTC	1 cut(s)	1116
AspA2I	CCTAGG	1 cut(s)	1138
AspLEI	GCGC	4 cut(s)	52, 790, 1094, 1483
AspS9I	GGNCC	8 cut(s)	98, 236, 356, 908, 935, 1290, 1302, 1386
AsuC2I	CCSGG	3 cut(s)	1401, 1459, 1607
AsuHPI	GGTGA	3 cut(s)	1009, 1029, 1205
AsuII	TTCGAA	2 cut(s)	1278, 1543
AsuNHI	GCTAGC	1 cut(s)	394
AvaII	GGWCC	3 cut(s)	98, 356, 908
AvrII	CCTAGG	1 cut(s)	1138
AxyI	CCTNAGG	1 cut(s)	931
BalI	TGGCCA	1 cut(s)	363
BamHI	GGATCC	1 cut(s)	1461
BanI	GGYRCC	1 cut(s)	1531
BauI	CACGAG	1 cut(s)	1269
BbsI	GAAGAC	1 cut(s)	498
Bbv12I	GWGCWC	1 cut(s)	250
BbvI	GCAGC	8 cut(s)	184, 212, 241, 442, 451, 485, 1098, 1342
BccI	CCATC	5 cut(s)	82, 650, 820, 1357, 1621
BceAI	ACGGC	1 cut(s)	568
BcgI	CGANNNNNNTGC	4 cut(s)	179, 213, 758, 792
BciT130I	CCWGG	3 cut(s)	360, 1042, 1109
BciVI	GTATCC	1 cut(s)	1633
BcnI	CCSGG	3 cut(s)	1401, 1459, 1607
BcoDI	GTCTC	1 cut(s)	296
BfmI	CTRYAG	3 cut(s)	198, 1056, 1356
BfoI	RGCGCY	2 cut(s)	791, 1095
BfrI	CTTAAG	1 cut(s)	1252
BfuI	GTATCC	1 cut(s)	1633
BlnI	CCTAGG	1 cut(s)	1138
Bme1390I	CCNGG	6 cut(s)	360, 1042, 1109, 1401, 1459, 1607
Bme18I	GGWCC	3 cut(s)	98, 356, 908
BmgBI	CACGTC	1 cut(s)	1657
BmgT120I	GGNCC	8 cut(s)	98, 236, 356, 908, 935, 1290, 1302, 1386
BmiI	GGNNCC	7 cut(s)	522, 909, 910, 966, 1304, 1463, 1533
BmrFI	CCNGG	6 cut(s)	360, 1042, 1109, 1401, 1459, 1607
BmrI	ACTGGG	3 cut(s)	709, 1203, 1514
BmtI	GCTAGC	1 cut(s)	398
BmuI	ACTGGG	3 cut(s)	709, 1203, 1514
BpiI	GAAGAC	1 cut(s)	498
BplI	GAGNNNNNCTC	2 cut(s)	884, 916
Bpu14I	TTCGAA	2 cut(s)	1278, 1543
BpuMI	CCSGG	3 cut(s)	1401, 1459, 1607
BsaBI	GATNNNNATC	1 cut(s)	1644
BsaJI	CCNNGG	5 cut(s)	513, 993, 1040, 1138, 1400
BsaWI	WCCGGW	2 cut(s)	1202, 1621
BsaXI	ACNNNNNCTCC	2 cut(s)	1601, 1631
Bsc4I	CCNNNNNNNGG	6 cut(s)	700, 728, 884, 983, 1174, 1299
Bse118I	RCCGGY	1 cut(s)	421
Bse1I	ACTGG	6 cut(s)	704, 803, 1198, 1244, 1509, 1562
Bse21I	CCTNAGG	1 cut(s)	931
Bse3DI	GCAATG	1 cut(s)	538
Bse8I	GATNNNNATC	1 cut(s)	1644
BseAI	TCCGGA	1 cut(s)	1202
BseBI	CCWGG	3 cut(s)	360, 1042, 1109
BseDI	CCNNGG	5 cut(s)	513, 993, 1040, 1138, 1400
BseGI	GGATG	1 cut(s)	274
BseJI	GATNNNNATC	1 cut(s)	1644
BseLI	CCNNNNNNNGG	6 cut(s)	700, 728, 884, 983, 1174, 1299
BseMI	GCAATG	1 cut(s)	538
BseMII	CTCAG	4 cut(s)	458, 579, 836, 945
BseNI	ACTGG	6 cut(s)	704, 803, 1198, 1244, 1509, 1562
BseRI	GAGGAG	1 cut(s)	102
BseX3I	CGGCCG	1 cut(s)	581
BseXI	GCAGC	8 cut(s)	184, 212, 241, 442, 451, 485, 1098, 1342
Bsh1236I	CGCG	1 cut(s)	1481
Bsh1285I	CGRYCG	1 cut(s)	584
BshNI	GGYRCC	1 cut(s)	1531
BsiEI	CGRYCG	1 cut(s)	584
BsiHKAI	GWGCWC	1 cut(s)	250
BsiSI	CCGG	6 cut(s)	422, 1203, 1400, 1458, 1606, 1622
BslFI	GGGAC	2 cut(s)	921, 1062
BslI	CCNNNNNNNGG	6 cut(s)	700, 728, 884, 983, 1174, 1299
BsmAI	GTCTC	1 cut(s)	296
BsmFI	GGGAC	2 cut(s)	921, 1062
BsmI	GAATGC	3 cut(s)	87, 1184, 1503
Bsp119I	TTCGAA	2 cut(s)	1278, 1543
Bsp1286I	GDGCHC	1 cut(s)	250
Bsp13I	TCCGGA	1 cut(s)	1202
Bsp1407I	TGTACA	1 cut(s)	383
Bsp143I	GATC	5 cut(s)	103, 350, 1066, 1461, 1550
BspCNI	CTCAG	4 cut(s)	457, 580, 835, 944
BspEI	TCCGGA	1 cut(s)	1202
BspFNI	CGCG	1 cut(s)	1481
BspLI	GGNNCC	7 cut(s)	522, 909, 910, 966, 1304, 1463, 1533
BspMAI	CTGCAG	2 cut(s)	202, 1360
BspOI	GCTAGC	1 cut(s)	398
BspPI	GGATC	3 cut(s)	1061, 1456, 1469
BspQI	GCTCTTC	1 cut(s)	747
BspT104I	TTCGAA	2 cut(s)	1278, 1543
BspT107I	GGYRCC	1 cut(s)	1531
BspTI	CTTAAG	1 cut(s)	1252
BsrDI	GCAATG	1 cut(s)	538
BsrFI	RCCGGY	1 cut(s)	421
BsrGI	TGTACA	1 cut(s)	383
BsrI	ACTGG	6 cut(s)	704, 803, 1198, 1244, 1509, 1562
BssAI	RCCGGY	1 cut(s)	421
BssECI	CCNNGG	5 cut(s)	513, 993, 1040, 1138, 1400
BssMI	GATC	5 cut(s)	103, 350, 1066, 1461, 1550
BssNAI	GTATAC	1 cut(s)	13
BssSI	CACGAG	1 cut(s)	1269
BssT1I	CCWWGG	1 cut(s)	1138
Bst1107I	GTATAC	1 cut(s)	13
Bst2BI	CACGAG	1 cut(s)	1269
Bst2UI	CCWGG	3 cut(s)	360, 1042, 1109
Bst4CI	ACNGT	6 cut(s)	130, 346, 388, 866, 997, 1381
Bst6I	CTCTTC	2 cut(s)	747, 1396
BstAFI	CTTAAG	1 cut(s)	1252
BstAPI	GCANNNNNTGC	3 cut(s)	254, 464, 847
BstAUI	TGTACA	1 cut(s)	383
BstBI	TTCGAA	2 cut(s)	1278, 1543
BstC8I	GCNNGC	6 cut(s)	195, 396, 782, 786, 974, 1084
BstDEI	CTNAG	6 cut(s)	179, 444, 588, 822, 931, 1340
BstDSI	CCRYGG	1 cut(s)	993
BstENI	CCTNNNNNAGG	1 cut(s)	726
BstF5I	GGATG	1 cut(s)	274
BstFNI	CGCG	1 cut(s)	1481
BstH2I	RGCGCY	2 cut(s)	791, 1095
BstHHI	GCGC	4 cut(s)	52, 790, 1094, 1483
BstKTI	GATC	5 cut(s)	106, 353, 1069, 1464, 1553
BstMAI	GTCTC	1 cut(s)	296
BstMBI	GATC	5 cut(s)	103, 350, 1066, 1461, 1550
BstMCI	CGRYCG	1 cut(s)	584
BstNI	CCWGG	3 cut(s)	360, 1042, 1109
BstNSI	RCATGY	3 cut(s)	11, 197, 1211
BstSCI	CCNGG	6 cut(s)	358, 1040, 1107, 1399, 1457, 1605
BstSFI	CTRYAG	3 cut(s)	198, 1056, 1356
BstUI	CGCG	1 cut(s)	1481
BstV1I	GCAGC	8 cut(s)	184, 212, 241, 442, 451, 485, 1098, 1342
BstV2I	GAAGAC	1 cut(s)	498
BstX2I	RGATCY	2 cut(s)	1066, 1461
BstYI	RGATCY	2 cut(s)	1066, 1461
BstZ17I	GTATAC	1 cut(s)	13
BstZI	CGGCCG	1 cut(s)	581
Bsu36I	CCTNAGG	1 cut(s)	931
BsuI	GTATCC	1 cut(s)	1633
BtgI	CCRYGG	1 cut(s)	993
BtrI	CACGTC	1 cut(s)	1657
BtsCI	GGATG	1 cut(s)	274
BtsIMutI	CAGTG	1 cut(s)	1251
Cac8I	GCNNGC	6 cut(s)	195, 396, 782, 786, 974, 1084
CaiI	CAGNNNCTG	1 cut(s)	1364
CfoI	GCGC	4 cut(s)	52, 790, 1094, 1483
Cfr10I	RCCGGY	1 cut(s)	421
Cfr13I	GGNCC	8 cut(s)	98, 236, 356, 908, 935, 1290, 1302, 1386
Csp6I	GTAC	4 cut(s)	384, 736, 1045, 1559
CviQI	GTAC	4 cut(s)	384, 736, 1045, 1559
DdeI	CTNAG	6 cut(s)	179, 444, 588, 822, 931, 1340
DpnI	GATC	5 cut(s)	105, 352, 1068, 1463, 1552
DpnII	GATC	5 cut(s)	103, 350, 1066, 1461, 1550
EaeI	YGGCCR	2 cut(s)	361, 581
EagI	CGGCCG	1 cut(s)	581
Eam1104I	CTCTTC	2 cut(s)	747, 1396
EarI	CTCTTC	2 cut(s)	747, 1396
EciI	GGCGGA	1 cut(s)	1431
EclXI	CGGCCG	1 cut(s)	581
Eco130I	CCWWGG	1 cut(s)	1138
Eco47I	GGWCC	3 cut(s)	98, 356, 908
Eco52I	CGGCCG	1 cut(s)	581
Eco57I	CTGAAG	4 cut(s)	281, 1116, 1154, 1458
Eco81I	CCTNAGG	1 cut(s)	931
EcoNI	CCTNNNNNAGG	1 cut(s)	726
EcoO109I	RGGNCCY	5 cut(s)	236, 908, 935, 1302, 1386
EcoRII	CCWGG	3 cut(s)	358, 1040, 1107
EcoT14I	CCWWGG	1 cut(s)	1138
EcoT22I	ATGCAT	1 cut(s)	89
ErhI	CCWWGG	1 cut(s)	1138
FalI	AAGNNNNNCTT	4 cut(s)	223, 255, 1375, 1407
FaqI	GGGAC	2 cut(s)	921, 1062
FauI	CCCGC	4 cut(s)	741, 898, 981, 1087
FblI	GTMKAC	2 cut(s)	12, 896
FokI	GGATG	1 cut(s)	281
GlaI	GCGC	4 cut(s)	51, 789, 1093, 1482
HaeII	RGCGCY	2 cut(s)	791, 1095
HapII	CCGG	6 cut(s)	422, 1203, 1400, 1458, 1606, 1622
HhaI	GCGC	4 cut(s)	52, 790, 1094, 1483
Hin6I	GCGC	4 cut(s)	50, 788, 1092, 1481
HinP1I	GCGC	4 cut(s)	50, 788, 1092, 1481
HincII	GTYRAC	2 cut(s)	133, 897
HindII	GTYRAC	2 cut(s)	133, 897
HindIII	AAGCTT	1 cut(s)	673
HinfI	GANTC	9 cut(s)	117, 590, 893, 1034, 1104, 1221, 1229, 1280, 1432
HpaII	CCGG	6 cut(s)	422, 1203, 1400, 1458, 1606, 1622
HphI	GGTGA	3 cut(s)	1009, 1029, 1205
Hpy166II	GTNNAC	6 cut(s)	13, 133, 283, 897, 993, 1249
Hpy188I	TCNGA	5 cut(s)	447, 589, 825, 1066, 1376
Hpy188III	TCNNGA	9 cut(s)	92, 243, 299, 354, 649, 1007, 1203, 1407, 1649
Hpy8I	GTNNAC	6 cut(s)	13, 133, 283, 897, 993, 1249
Hpy99I	CGWCG	1 cut(s)	1658
HpyAV	CCTTC	7 cut(s)	89, 249, 338, 948, 1062, 1178, 1630
HpyCH4III	ACNGT	6 cut(s)	130, 346, 388, 866, 997, 1381
HpyCH4IV	ACGT	2 cut(s)	496, 1656
HpyF3I	CTNAG	6 cut(s)	179, 444, 588, 822, 931, 1340
HpySE526I	ACGT	2 cut(s)	496, 1656
HspAI	GCGC	4 cut(s)	50, 788, 1092, 1481
KflI	GGGWCCC	1 cut(s)	908
Kpn2I	TCCGGA	1 cut(s)	1202
Kzo9I	GATC	5 cut(s)	103, 350, 1066, 1461, 1550
LguI	GCTCTTC	1 cut(s)	747
LmnI	GCTCC	3 cut(s)	115, 520, 1444
Lsp1109I	GCAGC	8 cut(s)	184, 212, 241, 442, 451, 485, 1098, 1342
MaeII	ACGT	2 cut(s)	496, 1656
MaeIII	GTNAC	4 cut(s)	3, 997, 1257, 1617
MalI	GATC	5 cut(s)	105, 352, 1068, 1463, 1552
MboI	GATC	5 cut(s)	103, 350, 1066, 1461, 1550
MfeI	CAATTG	3 cut(s)	35, 921, 1484
MflI	RGATCY	2 cut(s)	1066, 1461
MhlI	GDGCHC	1 cut(s)	250
MlsI	TGGCCA	1 cut(s)	363
MluNI	TGGCCA	1 cut(s)	363
MlyI	GAGTC	3 cut(s)	599, 902, 1113
Mox20I	TGGCCA	1 cut(s)	363
Mph1103I	ATGCAT	1 cut(s)	89
MroI	TCCGGA	1 cut(s)	1202
MroXI	GAANNNNTTC	1 cut(s)	1116
MscI	TGGCCA	1 cut(s)	363
MseI	TTAA	2 cut(s)	597, 1253
MslI	CAYNNNNRTG	1 cut(s)	20
Msp20I	TGGCCA	1 cut(s)	363
MspA1I	CMGCKG	4 cut(s)	203, 1089, 1174, 1538
MspCI	CTTAAG	1 cut(s)	1252
MspI	CCGG	6 cut(s)	422, 1203, 1400, 1458, 1606, 1622
MspR9I	CCNGG	6 cut(s)	360, 1042, 1109, 1401, 1459, 1607
MunI	CAATTG	3 cut(s)	35, 921, 1484
Mva1269I	GAATGC	3 cut(s)	87, 1184, 1503
MvaI	CCWGG	3 cut(s)	360, 1042, 1109
MvnI	CGCG	1 cut(s)	1481
NciI	CCSGG	3 cut(s)	1401, 1459, 1607
NdeII	GATC	5 cut(s)	103, 350, 1066, 1461, 1550
NheI	GCTAGC	1 cut(s)	394
NlaIV	GGNNCC	7 cut(s)	522, 909, 910, 966, 1304, 1463, 1533
NmeAIII	GCCGAG	1 cut(s)	214
NmuCI	GTSAC	1 cut(s)	997
NsiI	ATGCAT	1 cut(s)	89
NspI	RCATGY	3 cut(s)	11, 197, 1211
NspV	TTCGAA	2 cut(s)	1278, 1543
PaeI	GCATGC	1 cut(s)	197
PciI	ACATGT	1 cut(s)	7
PciSI	GCTCTTC	1 cut(s)	747
PctI	GAATGC	3 cut(s)	87, 1184, 1503
PdmI	GAANNNNTTC	1 cut(s)	1116
PfeI	GAWTC	6 cut(s)	117, 1034, 1221, 1229, 1280, 1432
PfoI	TCCNGGA	1 cut(s)	1107
PleI	GAGTC	3 cut(s)	598, 901, 1112
PpsI	GAGTC	3 cut(s)	598, 901, 1112
PpuMI	RGGWCCY	1 cut(s)	908
PscI	ACATGT	1 cut(s)	7
PshBI	ATTAAT	1 cut(s)	597
Psp5II	RGGWCCY	1 cut(s)	908
Psp6I	CCWGG	3 cut(s)	358, 1040, 1107
PspGI	CCWGG	3 cut(s)	358, 1040, 1107
PspN4I	GGNNCC	7 cut(s)	522, 909, 910, 966, 1304, 1463, 1533
PspPI	GGNCC	8 cut(s)	98, 236, 356, 908, 935, 1290, 1302, 1386
PspPPI	RGGWCCY	1 cut(s)	908
PstI	CTGCAG	2 cut(s)	202, 1360
PstNI	CAGNNNCTG	1 cut(s)	1364
PsuI	RGATCY	2 cut(s)	1066, 1461
PvuII	CAGCTG	2 cut(s)	1174, 1538
RsaI	GTAC	4 cut(s)	385, 737, 1046, 1560
RsaNI	GTAC	4 cut(s)	384, 736, 1045, 1559
RseI	CAYNNNNRTG	1 cut(s)	20
SalI	GTCGAC	1 cut(s)	895
SapI	GCTCTTC	1 cut(s)	747
SaqAI	TTAA	2 cut(s)	597, 1253
Sau3AI	GATC	5 cut(s)	103, 350, 1066, 1461, 1550
Sau96I	GGNCC	8 cut(s)	98, 236, 356, 908, 935, 1290, 1302, 1386
SchI	GAGTC	3 cut(s)	599, 902, 1113
ScrFI	CCNGG	6 cut(s)	360, 1042, 1109, 1401, 1459, 1607
SduI	GDGCHC	1 cut(s)	250
SfcI	CTRYAG	3 cut(s)	198, 1056, 1356
SfuI	TTCGAA	2 cut(s)	1278, 1543
SinI	GGWCC	3 cut(s)	98, 356, 908
SmiMI	CAYNNNNRTG	1 cut(s)	20
SmlI	CTYRAG	1 cut(s)	1252
SmoI	CTYRAG	1 cut(s)	1252
SphI	GCATGC	1 cut(s)	197
StyD4I	CCNGG	6 cut(s)	358, 1040, 1107, 1399, 1457, 1605
StyI	CCWWGG	1 cut(s)	1138
TaaI	ACNGT	6 cut(s)	130, 346, 388, 866, 997, 1381
TaiI	ACGT	2 cut(s)	499, 1659
TaqI	TCGA	5 cut(s)	115, 349, 896, 1278, 1543
TatI	WGTACW	1 cut(s)	383
TauI	GCSGC	4 cut(s)	583, 1092, 1348, 1481
TfiI	GAWTC	6 cut(s)	117, 1034, 1221, 1229, 1280, 1432
Tru1I	TTAA	2 cut(s)	597, 1253
Tru9I	TTAA	2 cut(s)	597, 1253
TscAI	CASTG	1 cut(s)	1251
TseFI	GTSAC	1 cut(s)	997
TseI	GCWGC	8 cut(s)	197, 200, 254, 455, 464, 473, 1086, 1355
Tsp45I	GTSAC	1 cut(s)	997
TspDTI	ATGAA	5 cut(s)	72, 285, 549, 930, 1516
TspGWI	ACGGA	2 cut(s)	753, 835
TspRI	CASTG	1 cut(s)	1251
Vha464I	CTTAAG	1 cut(s)	1252
VpaK11BI	GGWCC	3 cut(s)	98, 356, 908
VspI	ATTAAT	1 cut(s)	597
XagI	CCTNNNNNAGG	1 cut(s)	726
XapI	RAATTY	1 cut(s)	1417
XbaI	TCTAGA	1 cut(s)	1406
XceI	RCATGY	3 cut(s)	11, 197, 1211
XmaJI	CCTAGG	1 cut(s)	1138
XmiI	GTMKAC	2 cut(s)	12, 896
XmnI	GAANNNNTTC	1 cut(s)	1116
Zsp2I	ATGCAT	1 cut(s)	89

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.