Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0011570

Physical Location & Seq

Genomic Coordinates Reverse (-)

30909630 .. 30913759

Gene Structure 4130 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1233300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGTTTTTGTTTTTGGGTATGTATAAGAACCAATTGCAGGAGTTGGCACAGAGAAGTTGCTTCAATTTGCCATCTTATTCATGCATTCGGGAAGGACCAGATCATGCTCCTCGATTCAAAGTAACTGTCAACTTCAACGGAGATACTTTTGAAAGTCCTACATTCTGCCCTACTCTTAGACAGGCCGAGCATGCTGCAGCGGAGGTAGCATTGAACACACTTGCAAAAAGAGGCCCTTCCAGAGCACTGGCTGCAAGAGTATTGGATGAAACGGGGGTTTATAAGAACTTGCTTCAGGAGACTGCTCACAGAGCTGGGTTGAACCTTCCTGTTTATACAACTGTTCGATCTGGACCAGGCCATGTGCCTGTGTTCTCATGTACAGTTGAGCTAGCAGGAATGAGCTTTACTGGGCAACCGGCTAGGACAAAGAAACAAGCTCAGAAAAATGCTGCAATGGCTGCTTGGGCAGCCCTGAAAAGATTGGCTCAACGTGACTCATCTTCTTCCTCGGTGGAGCCTAGAGGCAATGAAGAACAGGAACAAGCCATTATTGGTCGTATTCTTGGAAGTTTGCGGCCATCTGAGTCTATTAATACTCAAAATGATCGCCGACATGGACAGCAAACATACATTCCCATCTTCCAGAAATCCACTCTGCCAACACCAAGCTTATATCCTTTGCAAATCTATAACTGGGGTTATTCTAATTATTCCCCTGAAATAGCAATGTACGAATTGTGGCAGCAAGAGCAATTATTACAGCAACAAAATCGCCTGCTGGCACTTCCTGTTTCACCAGTTATTCCATCTATTCCTCAGATATATCCATTTATGCAATCTGTGCTTCGCCCGGATCACTGTCTATACTTTCCAGCAAGAGAGCAAGAGCCGACCTCAGCAGGACCCAGAATTACAATTGCTACCTCAGGCCCATCATTTTGCTTCTCAAACCATTTGCTTCCTAACCCGCCAATCAGGGGCAAGTCCACGGTGACTATTCGAGAGATACAGGAAGAAAAGCCAGAAGAATCACCCGGGTACTCTCCTTCCGTAGTTTCAGATCCCTTTAGTCCCGGAAACAGTGGCGCTGAAGTCCAGGAACAAGTTCAGCTTGAGAAACAGAACCTAGGAGAGTTAGAAAGCAAAATTGGAAACCTTCAGCTGGAATGCAACAACCCAACTGGGCAGCCTGGACATGCTCACCCTAGAATCATGGATTCTAGTTTTAGGCCAGTTGACTTTAGATTACAGAATCCTCGTGGTTTCGACTCTTGTAGGCCCAATTTGAGACCCCAAAATCCTCCAAGAGTAAGTAGTGCTAGAATTCTAAGACCGCCATCTGCTGCCGAACCTGTAATAATCAGAACTGTAAGGCCCTCTTCCTCTCCGGGGTCTAGACCACAAAATTTTCCAAGCAGGAATCCCGCTCCACCAAGAATGAGAACTGGGATCCCTTCATCTTCAGCCGCACAATTGCCTGAAAGAATGCAACTGGGAGGACTGCGACCTAGCTTCATGGCACCTGCTGTTCGAATTAGATCAGTTGTACCAGTTTGTTCAGCTCCACCAGCAAGAAAAATGCCTAGTCCCAGCCAGGAGAGAGTGTTACCCGAGATGGAGAAGAAGGATGCTAATAGAGACGACATGCCAAAAGAACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

dsrm

Protein Analysis

555

Amino Acids

61.45

Weight (kDa)

9.49

Isoelectric Point (pI)

70.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
dsrm	PF00035	8 - 74	8.3e-15	Double-stranded RNA binding motif
dsrm	PF00035	94 - 159	4.5e-16	Double-stranded RNA binding motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011570)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g04080 FvH4_6g04080 FvH4_6g04080
malus_domestica	MD04G1216700.v1.1 MD12G1233300.v1.1
prunus_persica	Prupe.6G336400_v2.0.a1
pyrus_communis	pycom04g19270 pycom12g21580
rosa_chinensis	RchiOBHm_Chr3g0452631
rosa_laevigata	RLG00000006117 RLG00000025860
rosa_multiflora	Rmu_sc0030581.1_g000001
rosa_roxburghii	Rroxscaffold_6G00429670
rosa_rugosa	Rorug02G0642000 Rorug02G0642100
rosa_samantha	Rh3AG044400 Rh3BG046700 Rh3CG045200 Rh3DG045600
rosa_wichuraiana	Rw3G003460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	282
AarI	CACCTGC	1 cut(s)	1534
Acc36I	ACCTGC	1 cut(s)	1534
AccB1I	GGYRCC	1 cut(s)	1522
AccBSI	CCGCTC	1 cut(s)	1430
AciI	CCGC	6 cut(s)	200, 577, 971, 1337, 1428, 1470
AclI	AACGTT	1 cut(s)	1660
AclWI	GGATC	4 cut(s)	864, 1058, 1447, 1460
AcoI	YGGCCR	1 cut(s)	578
AcsI	RAATTY	2 cut(s)	1326, 1408
AcuI	CTGAAG	4 cut(s)	278, 1113, 1145, 1449
AfaI	GTAC	4 cut(s)	382, 734, 1043, 1551
AfiI	CCNNNNNNNGG	4 cut(s)	37, 980, 1165, 1392
AgsI	TTSAA	6 cut(s)	64, 118, 136, 152, 214, 322
AjnI	CCWGG	4 cut(s)	355, 1098, 1192, 1596
AjuI	GAANNNNNNNTTGG	2 cut(s)	1134, 1166
AluBI	AGCT	9 cut(s)	314, 391, 405, 440, 672, 1114, 1165, 1515, 1565
AluI	AGCT	9 cut(s)	314, 391, 405, 440, 672, 1114, 1165, 1515, 1565
Alw21I	GWGCWC	1 cut(s)	247
Alw26I	GTCTC	3 cut(s)	293, 1285, 1635
AlwI	GGATC	4 cut(s)	864, 1058, 1447, 1460
Ama87I	CYCGRG	2 cut(s)	1037, 1613
AoxI	GGCC	8 cut(s)	183, 232, 358, 578, 931, 1232, 1280, 1376
ApeKI	GCWGC	9 cut(s)	194, 197, 251, 452, 461, 470, 745, 1189, 1346
ApoI	RAATTY	2 cut(s)	1326, 1408
ArsI	GACNNNNNNTTYG	2 cut(s)	111, 143
AseI	ATTAAT	1 cut(s)	594
Asp700I	GAANNNNTTC	1 cut(s)	1107
AspA2I	CCTAGG	1 cut(s)	1129
AspLEI	GCGC	1 cut(s)	1091
AspS9I	GGNCC	7 cut(s)	95, 233, 353, 905, 932, 1281, 1377
AsuC2I	CCSGG	5 cut(s)	854, 1038, 1039, 1077, 1392
AsuHPI	GGTGA	4 cut(s)	789, 1006, 1026, 1196
AsuII	TTCGAA	1 cut(s)	1534
AsuNHI	GCTAGC	1 cut(s)	391
AvaI	CYCGRG	2 cut(s)	1037, 1613
AvaII	GGWCC	3 cut(s)	95, 353, 905
AvrII	CCTAGG	1 cut(s)	1129
AxyI	CCTNAGG	1 cut(s)	928
BamHI	GGATCC	1 cut(s)	1452
BanI	GGYRCC	1 cut(s)	1522
BauI	CACGAG	1 cut(s)	1260
Bbv12I	GWGCWC	1 cut(s)	247
BbvCI	CCTCAGC	1 cut(s)	898
BbvI	GCAGC	9 cut(s)	181, 209, 238, 439, 448, 482, 757, 1201, 1333
BccI	CCATC	7 cut(s)	79, 589, 647, 817, 943, 1348, 1612
BcgI	CGANNNNNNTGC	4 cut(s)	176, 210, 755, 789
BciT130I	CCWGG	4 cut(s)	357, 1100, 1194, 1598
BcnI	CCSGG	5 cut(s)	854, 1038, 1039, 1077, 1392
BcoDI	GTCTC	3 cut(s)	293, 1285, 1635
BfmI	CTRYAG	1 cut(s)	195
BfoI	RGCGCY	1 cut(s)	1092
BfuAI	ACCTGC	1 cut(s)	1534
BlnI	CCTAGG	1 cut(s)	1129
Bme1390I	CCNGG	9 cut(s)	357, 854, 1038, 1039, 1077, 1100, 1194, 1392, 1598
Bme18I	GGWCC	3 cut(s)	95, 353, 905
BmeT110I	CYCGRG	2 cut(s)	1037, 1613
BmgT120I	GGNCC	7 cut(s)	95, 233, 353, 905, 932, 1281, 1377
BmiI	GGNNCC	4 cut(s)	519, 907, 1454, 1524
BmrFI	CCNGG	9 cut(s)	357, 854, 1038, 1039, 1077, 1100, 1194, 1392, 1598
BmrI	ACTGGG	5 cut(s)	420, 706, 1194, 1458, 1505
BmsI	GCATC	1 cut(s)	1621
BmtI	GCTAGC	1 cut(s)	395
BmuI	ACTGGG	5 cut(s)	420, 706, 1194, 1458, 1505
BplI	GAGNNNNNCTC	2 cut(s)	881, 913
Bpu10I	CCTNAGC	1 cut(s)	898
Bpu14I	TTCGAA	1 cut(s)	1534
BpuEI	CTTGAG	1 cut(s)	1136
BpuMI	CCSGG	5 cut(s)	854, 1038, 1039, 1077, 1392
BsaI	GGTCTC	1 cut(s)	1285
BsaJI	CCNNGG	5 cut(s)	510, 990, 1037, 1129, 1391
BsaXI	ACNNNNNCTCC	2 cut(s)	1592, 1622
Bsc4I	CCNNNNNNNGG	4 cut(s)	37, 980, 1165, 1392
Bse118I	RCCGGY	1 cut(s)	418
Bse1I	ACTGG	9 cut(s)	252, 415, 701, 800, 1189, 1235, 1453, 1500, 1553
Bse21I	CCTNAGG	1 cut(s)	928
Bse3DI	GCAATG	3 cut(s)	462, 535, 735
BseBI	CCWGG	4 cut(s)	357, 1100, 1194, 1598
BseDI	CCNNGG	5 cut(s)	510, 990, 1037, 1129, 1391
BseGI	GGATG	2 cut(s)	271, 1636
BseLI	CCNNNNNNNGG	4 cut(s)	37, 980, 1165, 1392
BseMI	GCAATG	3 cut(s)	462, 535, 735
BseMII	CTCAG	5 cut(s)	455, 576, 833, 912, 942
BseNI	ACTGG	9 cut(s)	252, 415, 701, 800, 1189, 1235, 1453, 1500, 1553
BseRI	GAGGAG	1 cut(s)	99
BseXI	GCAGC	9 cut(s)	181, 209, 238, 439, 448, 482, 757, 1201, 1333
BseYI	CCCAGC	2 cut(s)	314, 1592
BshFI	GGCC	8 cut(s)	185, 234, 360, 580, 933, 1234, 1282, 1378
BshNI	GGYRCC	1 cut(s)	1522
BsiHKAI	GWGCWC	1 cut(s)	247
BsiHKCI	CYCGRG	2 cut(s)	1037, 1613
BsiSI	CCGG	5 cut(s)	419, 854, 1038, 1077, 1391
BslFI	GGGAC	2 cut(s)	1059, 1575
BslI	CCNNNNNNNGG	4 cut(s)	37, 980, 1165, 1392
BsmAI	GTCTC	3 cut(s)	293, 1285, 1635
BsmBI	CGTCTC	1 cut(s)	1635
BsmFI	GGGAC	2 cut(s)	1059, 1575
BsmI	GAATGC	3 cut(s)	84, 1175, 1494
BsnI	GGCC	8 cut(s)	185, 234, 360, 580, 933, 1234, 1282, 1378
Bso31I	GGTCTC	1 cut(s)	1285
BsoBI	CYCGRG	2 cut(s)	1037, 1613
Bsp119I	TTCGAA	1 cut(s)	1534
Bsp1286I	GDGCHC	1 cut(s)	247
Bsp1407I	TGTACA	1 cut(s)	380
Bsp143I	GATC	7 cut(s)	100, 347, 607, 856, 1063, 1452, 1541
BspACI	CCGC	6 cut(s)	200, 577, 971, 1337, 1428, 1470
BspANI	GGCC	8 cut(s)	185, 234, 360, 580, 933, 1234, 1282, 1378
BspCNI	CTCAG	5 cut(s)	454, 577, 832, 911, 941
BspLI	GGNNCC	4 cut(s)	519, 907, 1454, 1524
BspMAI	CTGCAG	1 cut(s)	199
BspMI	ACCTGC	1 cut(s)	1534
BspOI	GCTAGC	1 cut(s)	395
BspPI	GGATC	4 cut(s)	864, 1058, 1447, 1460
BspT104I	TTCGAA	1 cut(s)	1534
BspT107I	GGYRCC	1 cut(s)	1522
BspTNI	GGTCTC	1 cut(s)	1285
BsrBI	CCGCTC	1 cut(s)	1430
BsrDI	GCAATG	3 cut(s)	462, 535, 735
BsrFI	RCCGGY	1 cut(s)	418
BsrGI	TGTACA	1 cut(s)	380
BsrI	ACTGG	9 cut(s)	252, 415, 701, 800, 1189, 1235, 1453, 1500, 1553
BssAI	RCCGGY	1 cut(s)	418
BssECI	CCNNGG	5 cut(s)	510, 990, 1037, 1129, 1391
BssMI	GATC	7 cut(s)	100, 347, 607, 856, 1063, 1452, 1541
BssSI	CACGAG	1 cut(s)	1260
BssT1I	CCWWGG	1 cut(s)	1129
Bst2BI	CACGAG	1 cut(s)	1260
Bst2UI	CCWGG	4 cut(s)	357, 1100, 1194, 1598
Bst4CI	ACNGT	7 cut(s)	127, 343, 385, 863, 994, 1085, 1372
Bst6I	CTCTTC	1 cut(s)	1387
BstAPI	GCANNNNNTGC	3 cut(s)	251, 461, 844
BstAUI	TGTACA	1 cut(s)	380
BstBI	TTCGAA	1 cut(s)	1534
BstC8I	GCNNGC	4 cut(s)	192, 393, 779, 783
BstDEI	CTNAG	7 cut(s)	176, 441, 585, 819, 898, 928, 1331
BstDSI	CCRYGG	1 cut(s)	990
BstF5I	GGATG	2 cut(s)	271, 1636
BstH2I	RGCGCY	1 cut(s)	1092
BstHHI	GCGC	1 cut(s)	1091
BstKTI	GATC	7 cut(s)	103, 350, 610, 859, 1066, 1455, 1544
BstMAI	GTCTC	3 cut(s)	293, 1285, 1635
BstMBI	GATC	7 cut(s)	100, 347, 607, 856, 1063, 1452, 1541
BstNI	CCWGG	4 cut(s)	357, 1100, 1194, 1598
BstNSI	RCATGY	3 cut(s)	194, 1202, 1651
BstSCI	CCNGG	9 cut(s)	355, 852, 1036, 1037, 1075, 1098, 1192, 1390, 1596
BstSFI	CTRYAG	1 cut(s)	195
BstV1I	GCAGC	9 cut(s)	181, 209, 238, 439, 448, 482, 757, 1201, 1333
BstX2I	RGATCY	2 cut(s)	1063, 1452
BstXI	CCANNNNNNTGG	1 cut(s)	247
BstYI	RGATCY	2 cut(s)	1063, 1452
Bsu36I	CCTNAGG	1 cut(s)	928
BsuRI	GGCC	8 cut(s)	185, 234, 360, 580, 933, 1234, 1282, 1378
BtgI	CCRYGG	1 cut(s)	990
BtsCI	GGATG	2 cut(s)	271, 1636
BtsIMutI	CAGTG	3 cut(s)	245, 859, 1090
BveI	ACCTGC	1 cut(s)	1534
Cac8I	GCNNGC	4 cut(s)	192, 393, 779, 783
CfoI	GCGC	1 cut(s)	1091
Cfr10I	RCCGGY	1 cut(s)	418
Cfr13I	GGNCC	7 cut(s)	95, 233, 353, 905, 932, 1281, 1377
Cfr9I	CCCGGG	1 cut(s)	1037
Csp6I	GTAC	4 cut(s)	381, 733, 1042, 1550
CviQI	GTAC	4 cut(s)	381, 733, 1042, 1550
DdeI	CTNAG	7 cut(s)	176, 441, 585, 819, 898, 928, 1331
DpnI	GATC	7 cut(s)	102, 349, 609, 858, 1065, 1454, 1543
DpnII	GATC	7 cut(s)	100, 347, 607, 856, 1063, 1452, 1541
EaeI	YGGCCR	1 cut(s)	578
Eam1104I	CTCTTC	1 cut(s)	1387
EarI	CTCTTC	1 cut(s)	1387
Eco130I	CCWWGG	1 cut(s)	1129
Eco31I	GGTCTC	1 cut(s)	1285
Eco47I	GGWCC	3 cut(s)	95, 353, 905
Eco57I	CTGAAG	4 cut(s)	278, 1113, 1145, 1449
Eco81I	CCTNAGG	1 cut(s)	928
Eco88I	CYCGRG	2 cut(s)	1037, 1613
EcoO109I	RGGNCCY	3 cut(s)	233, 905, 1377
EcoRI	GAATTC	1 cut(s)	1326
EcoRII	CCWGG	4 cut(s)	355, 1098, 1192, 1596
EcoT14I	CCWWGG	1 cut(s)	1129
EcoT22I	ATGCAT	1 cut(s)	86
ErhI	CCWWGG	1 cut(s)	1129
Esp3I	CGTCTC	1 cut(s)	1635
FalI	AAGNNNNNCTT	6 cut(s)	220, 252, 1098, 1130, 1366, 1398
FaqI	GGGAC	2 cut(s)	1059, 1575
FauI	CCCGC	2 cut(s)	978, 1435
FokI	GGATG	2 cut(s)	278, 1643
GlaI	GCGC	1 cut(s)	1090
GsaI	CCCAGC	2 cut(s)	318, 1596
HaeII	RGCGCY	1 cut(s)	1092
HaeIII	GGCC	8 cut(s)	185, 234, 360, 580, 933, 1234, 1282, 1378
HapII	CCGG	5 cut(s)	419, 854, 1038, 1077, 1391
HhaI	GCGC	1 cut(s)	1091
Hin6I	GCGC	1 cut(s)	1089
HinP1I	GCGC	1 cut(s)	1089
HincII	GTYRAC	2 cut(s)	130, 1240
HindII	GTYRAC	2 cut(s)	130, 1240
HindIII	AAGCTT	1 cut(s)	670
HinfI	GANTC	9 cut(s)	114, 497, 587, 1031, 1212, 1220, 1255, 1271, 1423
HpaII	CCGG	5 cut(s)	419, 854, 1038, 1077, 1391
HphI	GGTGA	4 cut(s)	789, 1006, 1026, 1196
Hpy166II	GTNNAC	3 cut(s)	130, 990, 1240
Hpy188I	TCNGA	5 cut(s)	444, 586, 822, 1063, 1367
Hpy188III	TCNNGA	7 cut(s)	89, 240, 296, 351, 646, 1004, 1398
Hpy8I	GTNNAC	3 cut(s)	130, 990, 1240
HpyAV	CCTTC	7 cut(s)	86, 246, 335, 1059, 1169, 1467, 1621
HpyCH4III	ACNGT	7 cut(s)	127, 343, 385, 863, 994, 1085, 1372
HpyCH4IV	ACGT	2 cut(s)	493, 1660
HpyF3I	CTNAG	7 cut(s)	176, 441, 585, 819, 898, 928, 1331
HpySE526I	ACGT	2 cut(s)	493, 1660
HspAI	GCGC	1 cut(s)	1089
Kzo9I	GATC	7 cut(s)	100, 347, 607, 856, 1063, 1452, 1541
LmnI	GCTCC	4 cut(s)	112, 517, 1435, 1570
Lsp1109I	GCAGC	9 cut(s)	181, 209, 238, 439, 448, 482, 757, 1201, 1333
LweI	GCATC	1 cut(s)	1621
MaeII	ACGT	2 cut(s)	493, 1660
MaeIII	GTNAC	4 cut(s)	121, 494, 994, 1608
MalI	GATC	7 cut(s)	102, 349, 609, 858, 1065, 1454, 1543
MbiI	CCGCTC	1 cut(s)	1430
MboI	GATC	7 cut(s)	100, 347, 607, 856, 1063, 1452, 1541
MboII	GAAGA	9 cut(s)	495, 498, 545, 634, 1028, 1040, 1374, 1455, 1636
MfeI	CAATTG	3 cut(s)	32, 918, 1475
MflI	RGATCY	2 cut(s)	1063, 1452
MhlI	GDGCHC	1 cut(s)	247
MlyI	GAGTC	3 cut(s)	491, 596, 1265
Mph1103I	ATGCAT	1 cut(s)	86
MroXI	GAANNNNTTC	1 cut(s)	1107
MseI	TTAA	1 cut(s)	594
MspA1I	CMGCKG	2 cut(s)	200, 1165
MspI	CCGG	5 cut(s)	419, 854, 1038, 1077, 1391
MspR9I	CCNGG	9 cut(s)	357, 854, 1038, 1039, 1077, 1100, 1194, 1392, 1598
MunI	CAATTG	3 cut(s)	32, 918, 1475
Mva1269I	GAATGC	3 cut(s)	84, 1175, 1494
MvaI	CCWGG	4 cut(s)	357, 1100, 1194, 1598
NciI	CCSGG	5 cut(s)	854, 1038, 1039, 1077, 1392
NdeII	GATC	7 cut(s)	100, 347, 607, 856, 1063, 1452, 1541
NheI	GCTAGC	1 cut(s)	391
NlaIV	GGNNCC	4 cut(s)	519, 907, 1454, 1524
NmeAIII	GCCGAG	1 cut(s)	211
NmuCI	GTSAC	2 cut(s)	494, 994
NsiI	ATGCAT	1 cut(s)	86
NspI	RCATGY	3 cut(s)	194, 1202, 1651
NspV	TTCGAA	1 cut(s)	1534
PaeI	GCATGC	1 cut(s)	194
PaqCI	CACCTGC	1 cut(s)	1534
PctI	GAATGC	3 cut(s)	84, 1175, 1494
PdmI	GAANNNNTTC	1 cut(s)	1107
PfeI	GAWTC	6 cut(s)	114, 1031, 1212, 1220, 1255, 1423
PfoI	TCCNGGA	2 cut(s)	1075, 1098
PleI	GAGTC	3 cut(s)	491, 595, 1265
PpsI	GAGTC	3 cut(s)	491, 595, 1265
PpuMI	RGGWCCY	1 cut(s)	905
PshBI	ATTAAT	1 cut(s)	594
PsiI	TTATAA	1 cut(s)	282
Psp1406I	AACGTT	1 cut(s)	1660
Psp5II	RGGWCCY	1 cut(s)	905
Psp6I	CCWGG	4 cut(s)	355, 1098, 1192, 1596
PspFI	CCCAGC	2 cut(s)	314, 1592
PspGI	CCWGG	4 cut(s)	355, 1098, 1192, 1596
PspN4I	GGNNCC	4 cut(s)	519, 907, 1454, 1524
PspPI	GGNCC	7 cut(s)	95, 233, 353, 905, 932, 1281, 1377
PspPPI	RGGWCCY	1 cut(s)	905
PstI	CTGCAG	1 cut(s)	199
PsuI	RGATCY	2 cut(s)	1063, 1452
PvuII	CAGCTG	1 cut(s)	1165
RsaI	GTAC	4 cut(s)	382, 734, 1043, 1551
RsaNI	GTAC	4 cut(s)	381, 733, 1042, 1550
SaqAI	TTAA	1 cut(s)	594
Sau3AI	GATC	7 cut(s)	100, 347, 607, 856, 1063, 1452, 1541
Sau96I	GGNCC	7 cut(s)	95, 233, 353, 905, 932, 1281, 1377
SchI	GAGTC	3 cut(s)	491, 596, 1265
ScrFI	CCNGG	9 cut(s)	357, 854, 1038, 1039, 1077, 1100, 1194, 1392, 1598
SduI	GDGCHC	1 cut(s)	247
SfaNI	GCATC	1 cut(s)	1621
SfcI	CTRYAG	1 cut(s)	195
SfuI	TTCGAA	1 cut(s)	1534
SinI	GGWCC	3 cut(s)	95, 353, 905
SmaI	CCCGGG	1 cut(s)	1039
SmlI	CTYRAG	1 cut(s)	1115
SmoI	CTYRAG	1 cut(s)	1115
SphI	GCATGC	1 cut(s)	194
SsiI	CCGC	6 cut(s)	200, 577, 971, 1337, 1428, 1470
StyD4I	CCNGG	9 cut(s)	355, 852, 1036, 1037, 1075, 1098, 1192, 1390, 1596
StyI	CCWWGG	1 cut(s)	1129
TaaI	ACNGT	7 cut(s)	127, 343, 385, 863, 994, 1085, 1372
TaiI	ACGT	2 cut(s)	496, 1663
TaqI	TCGA	5 cut(s)	112, 346, 1003, 1269, 1534
TatI	WGTACW	1 cut(s)	380
TauI	GCSGC	2 cut(s)	580, 1472
TfiI	GAWTC	6 cut(s)	114, 1031, 1212, 1220, 1255, 1423
Tru1I	TTAA	1 cut(s)	594
Tru9I	TTAA	1 cut(s)	594
TscAI	CASTG	3 cut(s)	252, 866, 1090
TseFI	GTSAC	2 cut(s)	494, 994
TseI	GCWGC	9 cut(s)	194, 197, 251, 452, 461, 470, 745, 1189, 1346
Tsp45I	GTSAC	2 cut(s)	494, 994
TspDTI	ATGAA	5 cut(s)	69, 282, 546, 1449, 1507
TspGWI	ACGGA	2 cut(s)	153, 1042
TspMI	CCCGGG	1 cut(s)	1037
TspRI	CASTG	3 cut(s)	252, 866, 1090
VpaK11BI	GGWCC	3 cut(s)	95, 353, 905
VspI	ATTAAT	1 cut(s)	594
XapI	RAATTY	2 cut(s)	1326, 1408
XbaI	TCTAGA	1 cut(s)	1397
XceI	RCATGY	3 cut(s)	194, 1202, 1651
XmaI	CCCGGG	1 cut(s)	1037
XmaJI	CCTAGG	1 cut(s)	1129
XmnI	GAANNNNTTC	1 cut(s)	1107
Zsp2I	ATGCAT	1 cut(s)	86

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.