Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0008051

Physical Location & Seq

Genomic Coordinates Reverse (-)

30883706 .. 30886454

Gene Structure 2749 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1181100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGAAGGGGGAGAAAGTTCAGGTTCAGGTTCCGGTTCTTCATCACCATCAAGATTTGCCTGCAGAAGATCAGGAGGATACTCTCGGAGTGGACCACGGAGAGATGTGGCTTGACGATGGCCAGGAGACTGCTCTTCTTGCCGATATCAATGACCCTTCCATCTTCTACAACGACCACTTCCCTCCTCTCCCGGACTTCCCATGCATGTCCTCCTCTTCCTCCTCATCCTCCACTCCTGCACCGGTCAAGCCAGTCACGTGCTCCTCCTCCTCCTCTTCATCGGTCTCCTCGTCCTCCTCCGCGGCCTCTTGGGCCGTTCTCAAGTCGGATGCGGAGCCCGAAGATGGAGAGAGAAAGCGGCAGCCCAACCAGAACAGTTACCACCACCAGCACTCGCAGATTGATGATCAGACAGTTGATGCGCATGCTTTGTCCTCCACCGCCTCGATGGAGATCTCTCAGCCGTTGGATCTCGGCGGTGGTGGTGGCGGAATAGATTGCATGGAAGAGACGGAAACTTTTGGGTACATGGATCTCTTTGAACCCAACGAGTTTTTTTACCCTTCTTCCATTTTCCAAAGTGACAGCCTTTTCATGGAGCAGTTTCAACAAGATCAAGATAATCAGCAATTAGCCATGGCTCAACTATTACAAGACCATCATGAAAGCGCTACTACTATTCAGTCCAATCCCCAACAACAAAAACAAGTAGTTGGACATGATGAGGAGAATACTAATAAGGATCTGAGTAATGAAAACAAGGATCCGGACGACATGGCCATGGTGTTCTTGGAGTGGCTGAGGTCCAACAGAGAGACGGTCTCCGCCGAAGACTTGAGAAGTGTGAAGATCAAGAAGTCGACGATCGAGTGCGCCGCCAGGCGCTTGGGCGGAGGAAAAGAGGCCATGAAGCAGTTGCTTAAACTTGTGCTTGAGTGGGTTCAGACCAACCATCTCCAAAAGAGGCGCAGCAATAGCATCACCACCAAAGACTCCAACATAATCACCCAACAACAGTACCAAGATCCTTTTCTAAACCCTAACCCTAACCCTAGTTCTAGAGTATTTGAATCAAACCCTTCTCGTAATTTCACTCAAACACAATGGATGGCGCCTCCACCACATGCAGCCGCCTATGATCCGGCAGCGGGGGGACTACTTATCCCCACTCCTCCTCCGGCTCCTCCTCCGCCTGCGACTTATACTTCCATGATAGGGTACATGGCAGCTGACCCTTTTGGGAATGGGCCAAGCCCATACCAAACATCTCCGGAGTATCATCATCACATGATTGAATCCGGTCAGCCATCATGGCCGTCTTCTCCGTTCGGTATGGGAACAGCCCCTTACGGGTCATTCCCGGATAATAACATTCACCTAGCCCCTCCCCAACACCATCCCCAGGCTTTTGCTGGGTATGGCAGTCAATACCAGCCTTATCAATATTTTCCCGGGAATGGTGAGCATCAGTTGATGAGGTTAGGGTCTTCGGCTACCAAAGAGGCGAGGAAGAAACGGATGGCGAGGCAGAAAAGGCTTGTGTCTCACCATAGGCACCACGGCCATCAACAGAATTCTCAGCAACTTAATAATCAAATGCCAGATCATCACCATCTTCAGCAGACAAGGCTTGTTGGGAACACTACTGATCTTAATTGCACTGGTGCTGTGCCGCTGCAGGCCAATCCGGGCAACTGGTTTTACTGGCCCACCGCCACAGCAGCCCCGTCCCCTTCTGCCATTGCCATGATGCCTAGCATTATGCAGGAAGCCGCACCACTTCCTCCAGTGCAGCAGATGGATCGGCCAGCTAGTACTCAAGCACAGAATTACAATCACGGTCGTAGTGCTGTGCAAGAAAGACAAGAAAGACAGGAGAGGCGTCAGGGATGGAAATCTGAGAAGAATCTGAAGTTTCTTCTTCAGAAGGTGTTGAAGCAGAGTGACGTGGGTAGTCTTGGAAGAATTGTATTGCCAAAAAAAGAAGCAGAAACCCATCTTCCTGAATTGGATGCAAGAGATGGGATTTCCATTGCAATGGAGGACATTGGGACTTCTCGTGTGTGGAACATGCGCTACAGGTATTCTACAAATATTGAGTCTCTTAATGTCCATTTTGCAGTCACGAATATTAGGTACTGGCCCAACAACAAAAGCAGGATGTATCTCCTTGAAAACACAGATTTTGTGAGAGCAAATGGACTCCAAGAAGGAGACTTCATAGTCATCTACTCCGACGTGAAATGTAACAAATATGTAAGCATCAAGGACATCACATCCTCTTTTTTAATTAGTTTTTTTTTTTTATCACATGAATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000988 GO:0000989 GO:0001076 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009657 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010154 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031930 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0048316 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0071840 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

Protein Analysis

774

Amino Acids

86.68

Weight (kDa)

5.73

Isoelectric Point (pI)

62.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24650
fragaria_vesca	FvH4_2g19630 FvH4_2g19630
malus_domestica	MD05G1181100.v1.1 MD10G1169900.v1.1
prunus_persica	Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0285371
rosa_laevigata	RLG00000012648
rosa_multiflora	Rmu_co8422167.1_g000001 Rmu_co8482611.1_g000001 Rmu_sc0006662.1_g000002 Rmu_sc0012535.1_g000011
rosa_roxburghii	Rroxscaffold_7G00183310
rosa_rugosa	Rorug06G0173900
rosa_samantha	Rh6AG284600 Rh6BG285800 Rh6CG286900 Rh6DG279900
rosa_wichuraiana	Rw6G024500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2222
Acc16I	TGCGCA	1 cut(s)	423
AccB1I	GGYRCC	2 cut(s)	1111, 1554
AccI	GTMKAC	1 cut(s)	860
AccII	CGCG	1 cut(s)	302
AccIII	TCCGGA	2 cut(s)	766, 1270
AclWI	GGATC	8 cut(s)	477, 540, 750, 758, 771, 1019, 1133, 1809
AcoI	YGGCCR	5 cut(s)	118, 777, 1313, 1561, 1805
AcsI	RAATTY	1 cut(s)	1573
AcuI	CTGAAG	3 cut(s)	1601, 1907, 1931
AcvI	CACGTG	1 cut(s)	258
AcyI	GRCGYC	2 cut(s)	1112, 1882
AfaI	GTAC	5 cut(s)	527, 1019, 1220, 1816, 2138
AfeI	AGCGCT	1 cut(s)	670
AfiI	CCNNNNNNNGG	7 cut(s)	344, 595, 1148, 1215, 1350, 1402, 1457
AgeI	ACCGGT	1 cut(s)	241
AgsI	TTSAA	6 cut(s)	542, 608, 1070, 1295, 1936, 2174
AjiI	CACGTC	2 cut(s)	1948, 2239
AjnI	CCWGG	3 cut(s)	120, 878, 1401
AjuI	GAANNNNNNNTTGG	2 cut(s)	1014, 1046
AluBI	AGCT	2 cut(s)	1229, 1811
AluI	AGCT	2 cut(s)	1229, 1811
Alw21I	GWGCWC	1 cut(s)	263
Alw26I	GTCTC	8 cut(s)	119, 289, 503, 809, 826, 1548, 2106, 2208
AlwI	GGATC	8 cut(s)	477, 540, 750, 758, 771, 1019, 1133, 1809
Ama87I	CYCGRG	1 cut(s)	1451
Aor13HI	TCCGGA	2 cut(s)	766, 1270
Aor51HI	AGCGCT	1 cut(s)	670
ApeKI	GCWGC	8 cut(s)	361, 969, 1127, 1145, 1226, 1675, 1721, 1792
ApoI	RAATTY	1 cut(s)	1573
ArsI	GACNNNNNNTTYG	2 cut(s)	2084, 2116
AsiGI	ACCGGT	1 cut(s)	241
AspLEI	GCGC	7 cut(s)	424, 671, 875, 885, 969, 1114, 2076
AspS9I	GGNCC	6 cut(s)	91, 312, 804, 1247, 1707, 2142
AsuC2I	CCSGG	5 cut(s)	191, 1361, 1452, 1453, 1689
AsuHPI	GGTGA	7 cut(s)	35, 973, 997, 1367, 1472, 1538, 1601
AvaI	CYCGRG	1 cut(s)	1451
AvaII	GGWCC	2 cut(s)	91, 804
BaeI	ACNNNNGTAYC	2 cut(s)	1001, 1034
BalI	TGGCCA	2 cut(s)	120, 779
BamHI	GGATCC	1 cut(s)	763
BanI	GGYRCC	2 cut(s)	1111, 1554
BanII	GRGCYC	1 cut(s)	339
BauI	CACGAG	1 cut(s)	2058
BbrPI	CACGTG	1 cut(s)	258
BbsI	GAAGAC	3 cut(s)	837, 1311, 1479
Bbv12I	GWGCWC	1 cut(s)	263
BbvCI	CCTCAGC	1 cut(s)	800
BbvI	GCAGC	8 cut(s)	373, 981, 1139, 1157, 1238, 1662, 1733, 1804
BceAI	ACGGC	4 cut(s)	299, 448, 1300, 1576
BcgI	CGANNNNNNTGC	2 cut(s)	1784, 1818
BciT130I	CCWGG	3 cut(s)	122, 880, 1403
BciVI	GTATCC	1 cut(s)	70
BclI	TGATCA	1 cut(s)	406
BcnI	CCSGG	5 cut(s)	191, 1361, 1452, 1453, 1689
BcoDI	GTCTC	8 cut(s)	119, 289, 503, 809, 826, 1548, 2106, 2208
BfaI	CTAG	5 cut(s)	1053, 1059, 1379, 1755, 1812
BfmI	CTRYAG	3 cut(s)	60, 1676, 2077
BfoI	RGCGCY	3 cut(s)	672, 886, 1115
BfuI	GTATCC	1 cut(s)	70
BglI	GCCNNNNNGGC	2 cut(s)	311, 1312
BglII	AGATCT	1 cut(s)	453
BmcAI	AGTACT	1 cut(s)	1816
Bme1390I	CCNGG	8 cut(s)	122, 191, 880, 1361, 1403, 1452, 1453, 1689
Bme18I	GGWCC	2 cut(s)	91, 804
BmeT110I	CYCGRG	1 cut(s)	1451
BmgBI	CACGTC	2 cut(s)	1948, 2239
BmgT120I	GGNCC	6 cut(s)	91, 312, 804, 1247, 1707, 2142
BmiI	GGNNCC	6 cut(s)	30, 336, 765, 1113, 1182, 1556
BmrFI	CCNGG	8 cut(s)	122, 191, 880, 1361, 1403, 1452, 1453, 1689
BmsI	GCATC	7 cut(s)	319, 409, 987, 1474, 1740, 2002, 2271
BpiI	GAAGAC	3 cut(s)	837, 1311, 1479
BplI	GAGNNNNNCTC	2 cut(s)	806, 838
BpmI	CTGGAG	1 cut(s)	1770
Bpu10I	CCTNAGC	1 cut(s)	800
BpuEI	CTTGAG	4 cut(s)	305, 856, 953, 1803
BpuMI	CCSGG	5 cut(s)	191, 1361, 1452, 1453, 1689
BsaAI	YACGTR	1 cut(s)	258
BsaBI	GATNNNNATC	2 cut(s)	452, 1894
BsaHI	GRCGYC	2 cut(s)	1112, 1882
BsaI	GGTCTC	2 cut(s)	289, 826
BsaJI	CCNNGG	7 cut(s)	94, 300, 636, 780, 1401, 1451, 1558
BsaWI	WCCGGW	5 cut(s)	31, 241, 766, 1270, 1298
BsaXI	ACNNNNNCTCC	2 cut(s)	1159, 1189
Bsc4I	CCNNNNNNNGG	7 cut(s)	344, 595, 1148, 1215, 1350, 1402, 1457
Bse118I	RCCGGY	1 cut(s)	241
Bse1I	ACTGG	6 cut(s)	251, 1666, 1700, 1709, 1787, 2144
Bse3DI	GCAATG	3 cut(s)	1740, 2031, 2043
Bse8I	GATNNNNATC	2 cut(s)	452, 1894
BseAI	TCCGGA	2 cut(s)	766, 1270
BseBI	CCWGG	3 cut(s)	122, 880, 1403
BseDI	CCNNGG	7 cut(s)	94, 300, 636, 780, 1401, 1451, 1558
BseGI	GGATG	9 cut(s)	224, 334, 1113, 1396, 1524, 1895, 2017, 2166, 2276
BseJI	GATNNNNATC	2 cut(s)	452, 1894
BseLI	CCNNNNNNNGG	7 cut(s)	344, 595, 1148, 1215, 1350, 1402, 1457
BseMI	GCAATG	3 cut(s)	1740, 2031, 2043
BseMII	CTCAG	5 cut(s)	473, 737, 791, 1592, 1890
BseNI	ACTGG	6 cut(s)	251, 1666, 1700, 1709, 1787, 2144
BseXI	GCAGC	8 cut(s)	373, 981, 1139, 1157, 1238, 1662, 1733, 1804
BseYI	CCCAGC	1 cut(s)	1412
BsgI	GTGCAG	2 cut(s)	222, 1811
Bsh1236I	CGCG	1 cut(s)	302
Bsh1285I	CGRYCG	2 cut(s)	867, 1843
BshNI	GGYRCC	2 cut(s)	1111, 1554
BshTI	ACCGGT	1 cut(s)	241
BsiEI	CGRYCG	2 cut(s)	867, 1843
BsiHKAI	GWGCWC	1 cut(s)	263
BsiHKCI	CYCGRG	1 cut(s)	1451
BslFI	GGGAC	3 cut(s)	1167, 1714, 2065
BslI	CCNNNNNNNGG	7 cut(s)	344, 595, 1148, 1215, 1350, 1402, 1457
BsmAI	GTCTC	8 cut(s)	119, 289, 503, 809, 826, 1548, 2106, 2208
BsmBI	CGTCTC	2 cut(s)	503, 809
BsmFI	GGGAC	3 cut(s)	1167, 1714, 2065
Bso31I	GGTCTC	2 cut(s)	289, 826
BsoBI	CYCGRG	1 cut(s)	1451
Bsp1286I	GDGCHC	2 cut(s)	263, 339
Bsp13I	TCCGGA	2 cut(s)	766, 1270
Bsp19I	CCATGG	2 cut(s)	636, 780
BspCNI	CTCAG	5 cut(s)	472, 738, 792, 1591, 1891
BspEI	TCCGGA	2 cut(s)	766, 1270
BspFNI	CGCG	1 cut(s)	302
BspHI	TCATGA	1 cut(s)	661
BspLI	GGNNCC	6 cut(s)	30, 336, 765, 1113, 1182, 1556
BspMAI	CTGCAG	2 cut(s)	64, 1680
BspPI	GGATC	8 cut(s)	477, 540, 750, 758, 771, 1019, 1133, 1809
BspQI	GCTCTTC	1 cut(s)	138
BspT107I	GGYRCC	2 cut(s)	1111, 1554
BspTNI	GGTCTC	2 cut(s)	289, 826
BsrDI	GCAATG	3 cut(s)	1740, 2031, 2043
BsrFI	RCCGGY	1 cut(s)	241
BsrI	ACTGG	6 cut(s)	251, 1666, 1700, 1709, 1787, 2144
BssAI	RCCGGY	1 cut(s)	241
BssECI	CCNNGG	7 cut(s)	94, 300, 636, 780, 1401, 1451, 1558
BssNI	GRCGYC	2 cut(s)	1112, 1882
BssSI	CACGAG	1 cut(s)	2058
BssT1I	CCWWGG	2 cut(s)	636, 780
Bst2BI	CACGAG	1 cut(s)	2058
Bst2UI	CCWGG	3 cut(s)	122, 880, 1403
Bst4CI	ACNGT	5 cut(s)	377, 415, 820, 1017, 1841
Bst6I	CTCTTC	4 cut(s)	138, 220, 280, 501
BstACI	GRCGYC	2 cut(s)	1112, 1882
BstBAI	YACGTR	1 cut(s)	258
BstC8I	GCNNGC	5 cut(s)	60, 426, 1194, 1680, 1809
BstDEI	CTNAG	5 cut(s)	459, 746, 800, 1578, 1899
BstDSI	CCRYGG	5 cut(s)	94, 300, 636, 780, 1558
BstF5I	GGATG	9 cut(s)	224, 334, 1113, 1396, 1524, 1895, 2017, 2166, 2276
BstFNI	CGCG	1 cut(s)	302
BstH2I	RGCGCY	3 cut(s)	672, 886, 1115
BstHHI	GCGC	7 cut(s)	424, 671, 875, 885, 969, 1114, 2076
BstMAI	GTCTC	8 cut(s)	119, 289, 503, 809, 826, 1548, 2106, 2208
BstMCI	CGRYCG	2 cut(s)	867, 1843
BstMWI	GCNNNNNNNGC	7 cut(s)	137, 311, 975, 1312, 1534, 1627, 1721
BstNI	CCWGG	3 cut(s)	122, 880, 1403
BstNSI	RCATGY	4 cut(s)	208, 428, 1127, 2074
BstSCI	CCNGG	8 cut(s)	120, 189, 878, 1359, 1401, 1450, 1451, 1687
BstSFI	CTRYAG	3 cut(s)	60, 1676, 2077
BstUI	CGCG	1 cut(s)	302
BstV1I	GCAGC	8 cut(s)	373, 981, 1139, 1157, 1238, 1662, 1733, 1804
BstV2I	GAAGAC	3 cut(s)	837, 1311, 1479
BstX2I	RGATCY	6 cut(s)	453, 469, 532, 742, 763, 1024
BstXI	CCANNNNNNTGG	2 cut(s)	886, 2038
BstYI	RGATCY	6 cut(s)	453, 469, 532, 742, 763, 1024
BsuI	GTATCC	1 cut(s)	70
BtgI	CCRYGG	5 cut(s)	94, 300, 636, 780, 1558
BtrI	CACGTC	2 cut(s)	1948, 2239
BtsCI	GGATG	9 cut(s)	224, 334, 1113, 1396, 1524, 1895, 2017, 2166, 2276
BtsIMutI	CAGTG	2 cut(s)	1659, 1794
Cac8I	GCNNGC	5 cut(s)	60, 426, 1194, 1680, 1809
CciI	TCATGA	1 cut(s)	661
CfoI	GCGC	7 cut(s)	424, 671, 875, 885, 969, 1114, 2076
Cfr10I	RCCGGY	1 cut(s)	241
Cfr13I	GGNCC	6 cut(s)	91, 312, 804, 1247, 1707, 2142
Cfr42I	CCGCGG	1 cut(s)	303
Cfr9I	CCCGGG	1 cut(s)	1451
CseI	GACGC	1 cut(s)	1871
Csp6I	GTAC	5 cut(s)	526, 1018, 1219, 1815, 2137
CspAI	ACCGGT	1 cut(s)	241
CviQI	GTAC	5 cut(s)	526, 1018, 1219, 1815, 2137
DdeI	CTNAG	5 cut(s)	459, 746, 800, 1578, 1899
DinI	GGCGCC	1 cut(s)	1113
DrdI	GACNNNNNNGTC	1 cut(s)	2222
DseDI	GACNNNNNNGTC	1 cut(s)	2222
EaeI	YGGCCR	5 cut(s)	118, 777, 1313, 1561, 1805
Eam1104I	CTCTTC	4 cut(s)	138, 220, 280, 501
EarI	CTCTTC	4 cut(s)	138, 220, 280, 501
EciI	GGCGGA	4 cut(s)	504, 814, 906, 1179
Eco130I	CCWWGG	2 cut(s)	636, 780
Eco24I	GRGCYC	1 cut(s)	339
Eco31I	GGTCTC	2 cut(s)	289, 826
Eco32I	GATATC	1 cut(s)	145
Eco47I	GGWCC	2 cut(s)	91, 804
Eco47III	AGCGCT	1 cut(s)	670
Eco57I	CTGAAG	3 cut(s)	1601, 1907, 1931
Eco72I	CACGTG	1 cut(s)	258
Eco88I	CYCGRG	1 cut(s)	1451
EcoRI	GAATTC	1 cut(s)	1573
EcoRII	CCWGG	3 cut(s)	120, 878, 1401
EcoRV	GATATC	1 cut(s)	145
EcoT14I	CCWWGG	2 cut(s)	636, 780
EcoT22I	ATGCAT	1 cut(s)	206
EcoT38I	GRGCYC	1 cut(s)	339
EgeI	GGCGCC	1 cut(s)	1113
EheI	GGCGCC	1 cut(s)	1113
ErhI	CCWWGG	2 cut(s)	636, 780
Esp3I	CGTCTC	2 cut(s)	503, 809
FaqI	GGGAC	3 cut(s)	1167, 1714, 2065
FauI	CCCGC	1 cut(s)	1141
FbaI	TGATCA	1 cut(s)	406
FblI	GTMKAC	1 cut(s)	860
FokI	GGATG	9 cut(s)	211, 341, 1120, 1383, 1531, 1902, 2024, 2173, 2263
FriOI	GRGCYC	1 cut(s)	339
FspAI	RTGCGCAY	1 cut(s)	423
FspBI	CTAG	5 cut(s)	1053, 1059, 1379, 1755, 1812
FspI	TGCGCA	1 cut(s)	423
GlaI	GCGC	7 cut(s)	423, 670, 874, 884, 968, 1113, 2075
GsaI	CCCAGC	1 cut(s)	1416
GsuI	CTGGAG	1 cut(s)	1770
HaeII	RGCGCY	3 cut(s)	672, 886, 1115
HgaI	GACGC	1 cut(s)	1871
HhaI	GCGC	7 cut(s)	424, 671, 875, 885, 969, 1114, 2076
Hin1I	GRCGYC	2 cut(s)	1112, 1882
Hin6I	GCGC	7 cut(s)	422, 669, 873, 883, 967, 1112, 2074
HinP1I	GCGC	7 cut(s)	422, 669, 873, 883, 967, 1112, 2074
HincII	GTYRAC	1 cut(s)	861
HindII	GTYRAC	1 cut(s)	861
HinfI	GANTC	6 cut(s)	992, 1070, 1295, 1906, 2099, 2202
HphI	GGTGA	7 cut(s)	35, 973, 997, 1367, 1472, 1538, 1601
Hpy166II	GTNNAC	2 cut(s)	91, 861
Hpy188I	TCNGA	9 cut(s)	86, 328, 411, 747, 945, 1900, 1911, 1926, 2236
Hpy8I	GTNNAC	2 cut(s)	91, 861
Hpy99I	CGWCG	2 cut(s)	865, 2240
HpyAV	CCTTC	6 cut(s)	165, 573, 1089, 1743, 1921, 2204
HpyCH4III	ACNGT	5 cut(s)	377, 415, 820, 1017, 1841
HpyCH4IV	ACGT	3 cut(s)	257, 1947, 2238
HpyF10VI	GCNNNNNNNGC	7 cut(s)	137, 311, 975, 1312, 1534, 1627, 1721
HpyF3I	CTNAG	5 cut(s)	459, 746, 800, 1578, 1899
HpySE526I	ACGT	3 cut(s)	257, 1947, 2238
Hsp92I	GRCGYC	2 cut(s)	1112, 1882
HspAI	GCGC	7 cut(s)	422, 669, 873, 883, 967, 1112, 2074
KasI	GGCGCC	1 cut(s)	1111
Kpn2I	TCCGGA	2 cut(s)	766, 1270
Ksp22I	TGATCA	1 cut(s)	406
KspI	CCGCGG	1 cut(s)	303
LguI	GCTCTTC	1 cut(s)	138
LmnI	GCTCC	4 cut(s)	266, 334, 598, 1186
Lsp1109I	GCAGC	8 cut(s)	373, 981, 1139, 1157, 1238, 1662, 1733, 1804
LweI	GCATC	7 cut(s)	319, 409, 987, 1474, 1740, 2002, 2271
MaeI	CTAG	5 cut(s)	1053, 1059, 1379, 1755, 1812
MaeII	ACGT	3 cut(s)	257, 1947, 2238
MaeIII	GTNAC	6 cut(s)	253, 377, 581, 1943, 2122, 2246
MflI	RGATCY	6 cut(s)	453, 469, 532, 742, 763, 1024
MhlI	GDGCHC	2 cut(s)	263, 339
MlsI	TGGCCA	2 cut(s)	120, 779
MluCI	AATT	8 cut(s)	629, 1087, 1573, 1654, 1828, 1965, 2006, 2289
MluNI	TGGCCA	2 cut(s)	120, 779
Mly113I	GGCGCC	1 cut(s)	1112
MlyI	GAGTC	3 cut(s)	986, 2108, 2196
MmeI	TCCRAC	6 cut(s)	306, 447, 694, 831, 1020, 2259
Mox20I	TGGCCA	2 cut(s)	120, 779
Mph1103I	ATGCAT	1 cut(s)	206
MroI	TCCGGA	2 cut(s)	766, 1270
MscI	TGGCCA	2 cut(s)	120, 779
MseI	TTAA	6 cut(s)	921, 1587, 1653, 2106, 2288, 2320
MslI	CAYNNNNRTG	3 cut(s)	779, 1745, 2036
Msp20I	TGGCCA	2 cut(s)	120, 779
MspA1I	CMGCKG	4 cut(s)	302, 1148, 1229, 1675
MspR9I	CCNGG	8 cut(s)	122, 191, 880, 1361, 1403, 1452, 1453, 1689
MvaI	CCWGG	3 cut(s)	122, 880, 1403
MvnI	CGCG	1 cut(s)	302
MwoI	GCNNNNNNNGC	7 cut(s)	137, 311, 975, 1312, 1534, 1627, 1721
NarI	GGCGCC	1 cut(s)	1112
NciI	CCSGG	5 cut(s)	191, 1361, 1452, 1453, 1689
NcoI	CCATGG	2 cut(s)	636, 780
NlaIV	GGNNCC	6 cut(s)	30, 336, 765, 1113, 1182, 1556
NmeAIII	GCCGAG	1 cut(s)	453
NmuCI	GTSAC	4 cut(s)	253, 581, 1943, 2122
NsbI	TGCGCA	1 cut(s)	423
NsiI	ATGCAT	1 cut(s)	206
NspI	RCATGY	4 cut(s)	208, 428, 1127, 2074
PaeI	GCATGC	1 cut(s)	428
PagI	TCATGA	1 cut(s)	661
PciSI	GCTCTTC	1 cut(s)	138
PcsI	WCGNNNNNNNCGW	1 cut(s)	287
PfeI	GAWTC	3 cut(s)	1070, 1295, 1906
PfoI	TCCNGGA	2 cut(s)	189, 1359
PinAI	ACCGGT	1 cut(s)	241
Ple19I	CGATCG	1 cut(s)	867
PleI	GAGTC	3 cut(s)	986, 2107, 2196
PluTI	GGCGCC	1 cut(s)	1115
PmaCI	CACGTG	1 cut(s)	258
PmlI	CACGTG	1 cut(s)	258
PpsI	GAGTC	3 cut(s)	986, 2107, 2196
Ppu21I	YACGTR	1 cut(s)	258
Psp6I	CCWGG	3 cut(s)	120, 878, 1401
PspCI	CACGTG	1 cut(s)	258
PspFI	CCCAGC	1 cut(s)	1412
PspGI	CCWGG	3 cut(s)	120, 878, 1401
PspN4I	GGNNCC	6 cut(s)	30, 336, 765, 1113, 1182, 1556
PspPI	GGNCC	6 cut(s)	91, 312, 804, 1247, 1707, 2142
PsrI	GAACNNNNNNTAC	2 cut(s)	2060, 2092
PstI	CTGCAG	2 cut(s)	64, 1680
PsuI	RGATCY	6 cut(s)	453, 469, 532, 742, 763, 1024
PvuI	CGATCG	1 cut(s)	867
PvuII	CAGCTG	1 cut(s)	1229
RsaI	GTAC	5 cut(s)	527, 1019, 1220, 1816, 2138
RsaNI	GTAC	5 cut(s)	526, 1018, 1219, 1815, 2137
RseI	CAYNNNNRTG	3 cut(s)	779, 1745, 2036
SacII	CCGCGG	1 cut(s)	303
SalI	GTCGAC	1 cut(s)	859
SapI	GCTCTTC	1 cut(s)	138
SaqAI	TTAA	6 cut(s)	921, 1587, 1653, 2106, 2288, 2320
Sau96I	GGNCC	6 cut(s)	91, 312, 804, 1247, 1707, 2142
ScaI	AGTACT	1 cut(s)	1816
SchI	GAGTC	3 cut(s)	986, 2108, 2196
ScrFI	CCNGG	8 cut(s)	122, 191, 880, 1361, 1403, 1452, 1453, 1689
SduI	GDGCHC	2 cut(s)	263, 339
SfaNI	GCATC	7 cut(s)	319, 409, 987, 1474, 1740, 2002, 2271
SfcI	CTRYAG	3 cut(s)	60, 1676, 2077
SfiI	GGCCNNNNNGGCC	1 cut(s)	311
SfoI	GGCGCC	1 cut(s)	1113
Sfr303I	CCGCGG	1 cut(s)	303
SgrBI	CCGCGG	1 cut(s)	303
SinI	GGWCC	2 cut(s)	91, 804
SmaI	CCCGGG	1 cut(s)	1453
SmiMI	CAYNNNNRTG	3 cut(s)	779, 1745, 2036
SmlI	CTYRAG	4 cut(s)	320, 835, 932, 1818
SmoI	CTYRAG	4 cut(s)	320, 835, 932, 1818
SphI	GCATGC	1 cut(s)	428
Sse9I	AATT	8 cut(s)	629, 1087, 1573, 1654, 1828, 1965, 2006, 2289
SspDI	GGCGCC	1 cut(s)	1111
SspI	AATATT	4 cut(s)	1445, 2095, 2131, 2318
SspMI	CTAG	5 cut(s)	1053, 1059, 1379, 1755, 1812
StyD4I	CCNGG	8 cut(s)	120, 189, 878, 1359, 1401, 1450, 1451, 1687
StyI	CCWWGG	2 cut(s)	636, 780
TaaI	ACNGT	5 cut(s)	377, 415, 820, 1017, 1841
TaiI	ACGT	3 cut(s)	260, 1950, 2241
TaqI	TCGA	3 cut(s)	446, 860, 867
TaqII	GACCGA	1 cut(s)	271
TasI	AATT	8 cut(s)	629, 1087, 1573, 1654, 1828, 1965, 2006, 2289
TatI	WGTACW	1 cut(s)	1814
TauI	GCSGC	6 cut(s)	305, 361, 878, 1133, 1675, 1775
TfiI	GAWTC	3 cut(s)	1070, 1295, 1906
Tru1I	TTAA	6 cut(s)	921, 1587, 1653, 2106, 2288, 2320
Tru9I	TTAA	6 cut(s)	921, 1587, 1653, 2106, 2288, 2320
TscAI	CASTG	2 cut(s)	1666, 1794
TseFI	GTSAC	4 cut(s)	253, 581, 1943, 2122
TseI	GCWGC	8 cut(s)	361, 969, 1127, 1145, 1226, 1675, 1721, 1792
Tsp45I	GTSAC	4 cut(s)	253, 581, 1943, 2122
TspDTI	ATGAA	8 cut(s)	17, 29, 267, 583, 678, 768, 923, 2209
TspGWI	ACGGA	4 cut(s)	111, 527, 1314, 1531
TspMI	CCCGGG	1 cut(s)	1451
TspRI	CASTG	2 cut(s)	1666, 1794
VpaK11BI	GGWCC	2 cut(s)	91, 804
XapI	RAATTY	1 cut(s)	1573
XbaI	TCTAGA	1 cut(s)	1058
XceI	RCATGY	4 cut(s)	208, 428, 1127, 2074
XcmI	CCANNNNNNNNNTGG	3 cut(s)	445, 787, 1409
XmaI	CCCGGG	1 cut(s)	1451
XmiI	GTMKAC	1 cut(s)	860
XspI	CTAG	5 cut(s)	1053, 1059, 1379, 1755, 1812
ZrmI	AGTACT	1 cut(s)	1816
Zsp2I	ATGCAT	1 cut(s)	206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.