Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0008051

Physical Location & Seq

Genomic Coordinates Forward (+)

22395324 .. 22398051

Gene Structure 2728 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00183310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGTCATCCTCTTCTTCTTCGTCTTCGACTCGGGTGCCGGTGAAGACCGTGTCGTCGTCTTCCTCGGCATCTTCGTCTTCTTCCGCGGCTTCCTGGGCGGTTCTCAAATCAGATGCGGAGGATAATAACAATTATCATTCTCAAGATTATCAGCTGCAACAAGACAACAACAACAACAATTACTACTCTCGTAACGATTCGGCTGATGCACATCCGGCGCGGGCGTTGTCCTCCACCGCCTCGATGGAGATCTCTCAGCCGTCGGATCTCGGAATGGAGTGCATGGACATGATGGAGACTTTCGGGTACATAGATCTGTTTGAAGGCAACGAGTTGTTCGACCCGTCTTCCATTTTCCAAAACGAGAATCCAATGATGGACCAGTTCCAAGCGCAGGAGCAACCTCCTCAGGAACAGATGCATGCAGACAATCAAACCTCACACCCACAAGAGAACATGACCATGGGAGATCAGAGCAACAAGGTTCCGGAGGACGACATGGCGTCTGTGTTCTTGGAGTGGCTGAGGTCAAACCGAGAGACGGTTTCAGCCGAGGATTTGAGGAGCGTGAAGATCAAGAAGTCAACAATCGAGTCCGCTGCGAGGCGTTTGGGTGGAGGCAAAGAGGCCATGAAGCAGTTACTCAAACTGGTGCTTGAGTGGGTTCAAACTAACCATCTCCAAAGGAGGCGCGGTACTAAAGACTCGGGGATACAACAGTATGCAGCAGACCCATTTCAAAACGCCATCCCTAACCCTAACCCTAACCCTAGTCTTAACCCTACACAAAACCCTCCCATATCATCGCCGTGGATGGCGTCTCCCCAGTATGATGCAGCGGCGCCCATTTTAGTCCCGACTCCATCGCAAGTGGGTTATCCGTCAACTCCGATGATGGGGTTTATGGGTCAGGACCCTTTTGGAAACGGGCCGGGTTACCAGCAACCAAATTCAGATCAATACCAGCATCAAATGCTAGAGACTGCACCAACCTGGCCACCTTCATCTCCATTTATGGGCAACAATTATGGATCTTTCCCGGATAGTAATATCCAACTAGCACCTCCTCAGCATCAGCAACCTCTTTCCGGTTACGGAGGGCAGTATGGTCAGTATCAATATTTTCAAGGGCAATCAGAGCTGGTGAGGTTAGGGTCTTCGGCAACTAAAGAGGCTAGGAAGAAGAGGATGCAAAGGCAGAGAAGGACTTTGTCACACCACCATGGAAGGCATCATGGACACCAACAGAATCAGCATACTAATCAAATGCCGGATCAAAGCCTAGTTGGGAACGCCGATCACAATTGCACTACTGCCGCAATGGGCAATCCGGTTGCTTCTAACTGGTTTTATTGGCCCACCACGGCGGCTGGTGGTCCTGCTCCTGCAGCCTCACTGGCAATGATGCAAACGATGGCTCCCGAGGCAGCACCACTGGTGCTTCCAGTTGATCGTCCGGCCAGTCAAGGGCAGAATTATAATCCGAGCCGGATTAATACACAGGAAAGGAGACAGGGATGGAAACCTGAGAATAAGAATTTGAGGTTCCTTCTTCAGAAAGTGTTGAAGCAAAGTGATGTGGGCAATCTTGGAAGAATTGTTTTGCCAAAAAAAGAAGCCGAAACCCATCTTCCTGAGTTAGAGGCAAGGGACGGAATTTCAATTGCAATGGAAGACATCGGGACTTCTCGTGTATGGAACATGCGCTATAGGTACGGCAAGCGGGGACTAAATCAGAGACCAAAAGGCCAGGAAAGTCGCAAAGGAACCAACATGCAAGCACTTCATCTGGCAACAATGGCTCGTCATCTAAGAAACAGTAAAGTAAGAAAGAAGAAGAAGAAGAAGAAGGAGAAGGAAGCTGAATTCTTCAGAGAAACCCAGCTAGCTCAACCGCCCTTCTGGCTTTTTCTTCCATGCATGAGAACAAAAGTGGACGGCAAAGATGGTCTAGGGTTGTTGGAATGCAGAGCAGCCCTTGATTTTATCTGCAAGTGGGAGGGGGTTTCAGAATTCATGCGGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000988 GO:0000989 GO:0001076 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009657 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010154 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031930 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0048316 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0071840 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

Protein Analysis

675

Amino Acids

75.64

Weight (kDa)

8.68

Isoelectric Point (pI)

55.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	519 - 575	9.5e-06	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24650
fragaria_vesca	FvH4_2g19630 FvH4_2g19630
malus_domestica	MD05G1181100.v1.1 MD10G1169900.v1.1
prunus_persica	Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0285371
rosa_laevigata	RLG00000012648
rosa_multiflora	Rmu_co8422167.1_g000001 Rmu_co8482611.1_g000001 Rmu_sc0006662.1_g000002 Rmu_sc0012535.1_g000011
rosa_roxburghii	Rroxscaffold_7G00183310
rosa_rugosa	Rorug06G0173900
rosa_samantha	Rh6AG284600 Rh6BG285800 Rh6CG286900 Rh6DG279900
rosa_wichuraiana	Rw6G024500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1479
AasI	GACNNNNNNGTC	1 cut(s)	52
AccB1I	GGYRCC	2 cut(s)	34, 841
AccII	CGCG	3 cut(s)	86, 220, 693
AccIII	TCCGGA	1 cut(s)	487
AclWI	GGATC	3 cut(s)	273, 1039, 1281
AcoI	YGGCCR	2 cut(s)	995, 1458
AcsI	RAATTY	5 cut(s)	949, 1537, 1656, 1865, 2012
AcuI	CTGAAG	2 cut(s)	1538, 1855
AcyI	GRCGYC	3 cut(s)	503, 818, 842
AfaI	GTAC	3 cut(s)	308, 697, 1715
AfiI	CCNNNNNNNGG	7 cut(s)	394, 541, 603, 896, 1016, 1088, 1467
AgsI	TTSAA	6 cut(s)	323, 668, 740, 1127, 1567, 1662
AhdI	GACNNNNNGTC	1 cut(s)	502
AjnI	CCWGG	3 cut(s)	92, 992, 1749
AluBI	AGCT	5 cut(s)	154, 1141, 1862, 1885, 1889
AluI	AGCT	5 cut(s)	154, 1141, 1862, 1885, 1889
Alw26I	GTCTC	6 cut(s)	290, 533, 825, 974, 1504, 1732
AlwI	GGATC	3 cut(s)	273, 1039, 1281
Ama87I	CYCGRG	3 cut(s)	30, 706, 1421
Aor13HI	TCCGGA	1 cut(s)	487
AoxI	GGCC	6 cut(s)	627, 929, 995, 1355, 1458, 1747
ApeKI	GCWGC	7 cut(s)	154, 599, 725, 836, 1388, 1427, 1973
ApoI	RAATTY	5 cut(s)	949, 1537, 1656, 1865, 2012
AseI	ATTAAT	1 cut(s)	1494
AspLEI	GCGC	5 cut(s)	220, 394, 693, 844, 1707
AspS9I	GGNCC	5 cut(s)	379, 913, 929, 1356, 1376
AsuC2I	CCSGG	2 cut(s)	933, 1040
AsuHPI	GGTGA	2 cut(s)	52, 1156
AsuNHI	GCTAGC	1 cut(s)	1885
AvaI	CYCGRG	3 cut(s)	30, 706, 1421
AvaII	GGWCC	3 cut(s)	379, 913, 1376
AxyI	CCTNAGG	1 cut(s)	408
BaeI	ACNNNNGTAYC	2 cut(s)	704, 737
BalI	TGGCCA	1 cut(s)	997
BanI	GGYRCC	2 cut(s)	34, 841
BauI	CACGAG	1 cut(s)	1689
BbsI	GAAGAC	7 cut(s)	15, 50, 51, 69, 339, 1149, 1680
BbvCI	CCTCAGC	2 cut(s)	524, 1068
BbvI	GCAGC	7 cut(s)	141, 586, 737, 848, 1400, 1439, 1985
BceAI	ACGGC	5 cut(s)	244, 793, 1380, 1732, 1954
BcgI	CGANNNNNNTGC	4 cut(s)	16, 50, 581, 615
BciT130I	CCWGG	3 cut(s)	94, 994, 1751
BciVI	GTATCC	1 cut(s)	705
BcnI	CCSGG	2 cut(s)	933, 1040
BcoDI	GTCTC	6 cut(s)	290, 533, 825, 974, 1504, 1732
BfaI	CTAG	7 cut(s)	771, 977, 1058, 1176, 1283, 1886, 1952
BfmI	CTRYAG	2 cut(s)	1386, 1708
BfoI	RGCGCY	1 cut(s)	845
BfuI	GTATCC	1 cut(s)	705
BglI	GCCNNNNNGGC	2 cut(s)	1397, 1903
BglII	AGATCT	2 cut(s)	249, 313
Bme1390I	CCNGG	5 cut(s)	94, 933, 994, 1040, 1751
Bme18I	GGWCC	3 cut(s)	379, 913, 1376
BmeRI	GACNNNNNGTC	1 cut(s)	502
BmeT110I	CYCGRG	3 cut(s)	30, 706, 1421
BmgT120I	GGNCC	5 cut(s)	379, 913, 929, 1356, 1376
BmiI	GGNNCC	7 cut(s)	36, 486, 843, 915, 1419, 1547, 1768
BmrFI	CCNGG	5 cut(s)	94, 933, 994, 1040, 1751
BmrI	ACTGGG	1 cut(s)	820
BmtI	GCTAGC	1 cut(s)	1889
BmuI	ACTGGG	1 cut(s)	820
BpiI	GAAGAC	7 cut(s)	15, 50, 51, 69, 339, 1149, 1680
Bpu10I	CCTNAGC	2 cut(s)	524, 1068
BpuEI	CTTGAG	2 cut(s)	126, 677
BpuMI	CCSGG	2 cut(s)	933, 1040
BsaBI	GATNNNNATC	2 cut(s)	210, 248
BsaHI	GRCGYC	3 cut(s)	503, 818, 842
BsaI	GGTCTC	1 cut(s)	1732
BsaJI	CCNNGG	9 cut(s)	63, 84, 93, 462, 552, 809, 1222, 1362, 1422
BsaWI	WCCGGW	3 cut(s)	487, 1088, 1330
BsaXI	ACNNNNNCTCC	4 cut(s)	679, 709, 1402, 1432
Bsc4I	CCNNNNNNNGG	7 cut(s)	394, 541, 603, 896, 1016, 1088, 1467
Bse118I	RCCGGY	1 cut(s)	37
Bse1I	ACTGG	8 cut(s)	382, 654, 826, 1349, 1401, 1440, 1445, 1461
Bse21I	CCTNAGG	1 cut(s)	408
Bse3DI	GCAATG	3 cut(s)	1326, 1407, 1674
Bse8I	GATNNNNATC	2 cut(s)	210, 248
BseAI	TCCGGA	1 cut(s)	487
BseBI	CCWGG	3 cut(s)	94, 994, 1751
BseDI	CCNNGG	9 cut(s)	63, 84, 93, 462, 552, 809, 1222, 1362, 1422
BseGI	GGATG	6 cut(s)	5, 211, 747, 819, 1194, 1523
BseJI	GATNNNNATC	2 cut(s)	210, 248
BseLI	CCNNNNNNNGG	7 cut(s)	394, 541, 603, 896, 1016, 1088, 1467
BseMI	GCAATG	3 cut(s)	1326, 1407, 1674
BseMII	CTCAG	6 cut(s)	269, 422, 515, 1082, 1518, 1626
BseNI	ACTGG	8 cut(s)	382, 654, 826, 1349, 1401, 1440, 1445, 1461
BseRI	GAGGAG	3 cut(s)	396, 577, 1056
BseXI	GCAGC	7 cut(s)	141, 586, 737, 848, 1400, 1439, 1985
BseYI	CCCAGC	1 cut(s)	1881
BsgI	GTGCAG	1 cut(s)	969
Bsh1236I	CGCG	3 cut(s)	86, 220, 693
BshFI	GGCC	6 cut(s)	629, 931, 997, 1357, 1460, 1749
BshNI	GGYRCC	2 cut(s)	34, 841
BsiHKCI	CYCGRG	3 cut(s)	30, 706, 1421
BslFI	GGGAC	4 cut(s)	839, 1664, 1696, 1740
BslI	CCNNNNNNNGG	7 cut(s)	394, 541, 603, 896, 1016, 1088, 1467
BsmAI	GTCTC	6 cut(s)	290, 533, 825, 974, 1504, 1732
BsmBI	CGTCTC	2 cut(s)	533, 825
BsmFI	GGGAC	4 cut(s)	839, 1664, 1696, 1740
BsmI	GAATGC	1 cut(s)	1970
BsnI	GGCC	6 cut(s)	629, 931, 997, 1357, 1460, 1749
Bso31I	GGTCTC	1 cut(s)	1732
BsoBI	CYCGRG	3 cut(s)	30, 706, 1421
Bsp13I	TCCGGA	1 cut(s)	487
Bsp19I	CCATGG	2 cut(s)	462, 1222
BspANI	GGCC	6 cut(s)	629, 931, 997, 1357, 1460, 1749
BspCNI	CTCAG	6 cut(s)	268, 421, 516, 1081, 1519, 1627
BspEI	TCCGGA	1 cut(s)	487
BspFNI	CGCG	3 cut(s)	86, 220, 693
BspLI	GGNNCC	7 cut(s)	36, 486, 843, 915, 1419, 1547, 1768
BspMAI	CTGCAG	1 cut(s)	1390
BspOI	GCTAGC	1 cut(s)	1889
BspPI	GGATC	3 cut(s)	273, 1039, 1281
BspT107I	GGYRCC	2 cut(s)	34, 841
BspTNI	GGTCTC	1 cut(s)	1732
BsrDI	GCAATG	3 cut(s)	1326, 1407, 1674
BsrFI	RCCGGY	1 cut(s)	37
BsrI	ACTGG	8 cut(s)	382, 654, 826, 1349, 1401, 1440, 1445, 1461
BssAI	RCCGGY	1 cut(s)	37
BssECI	CCNNGG	9 cut(s)	63, 84, 93, 462, 552, 809, 1222, 1362, 1422
BssNI	GRCGYC	3 cut(s)	503, 818, 842
BssSI	CACGAG	1 cut(s)	1689
BssT1I	CCWWGG	2 cut(s)	462, 1222
Bst2BI	CACGAG	1 cut(s)	1689
Bst2UI	CCWGG	3 cut(s)	94, 994, 1751
Bst4CI	ACNGT	4 cut(s)	49, 544, 720, 1820
Bst6I	CTCTTC	2 cut(s)	16, 1178
BstACI	GRCGYC	3 cut(s)	503, 818, 842
BstAPI	GCANNNNNTGC	1 cut(s)	973
BstC8I	GCNNGC	5 cut(s)	222, 423, 1721, 1779, 1887
BstDEI	CTNAG	7 cut(s)	255, 408, 524, 1068, 1527, 1635, 1811
BstDSI	CCRYGG	5 cut(s)	84, 462, 809, 1222, 1362
BstEII	GGTNACC	1 cut(s)	935
BstF5I	GGATG	6 cut(s)	5, 211, 747, 819, 1194, 1523
BstFNI	CGCG	3 cut(s)	86, 220, 693
BstH2I	RGCGCY	1 cut(s)	845
BstHHI	GCGC	5 cut(s)	220, 394, 693, 844, 1707
BstMAI	GTCTC	6 cut(s)	290, 533, 825, 974, 1504, 1732
BstMWI	GCNNNNNNNGC	9 cut(s)	95, 215, 973, 1138, 1388, 1397, 1424, 1799, 1903
BstNI	CCWGG	3 cut(s)	94, 994, 1751
BstNSI	RCATGY	3 cut(s)	425, 1705, 1777
BstPI	GGTNACC	1 cut(s)	935
BstSCI	CCNGG	5 cut(s)	92, 931, 992, 1038, 1749
BstSFI	CTRYAG	2 cut(s)	1386, 1708
BstUI	CGCG	3 cut(s)	86, 220, 693
BstV1I	GCAGC	7 cut(s)	141, 586, 737, 848, 1400, 1439, 1985
BstV2I	GAAGAC	7 cut(s)	15, 50, 51, 69, 339, 1149, 1680
BstX2I	RGATCY	4 cut(s)	249, 265, 313, 1031
BstYI	RGATCY	4 cut(s)	249, 265, 313, 1031
Bsu36I	CCTNAGG	1 cut(s)	408
BsuI	GTATCC	1 cut(s)	705
BsuRI	GGCC	6 cut(s)	629, 931, 997, 1357, 1460, 1749
BtgI	CCRYGG	5 cut(s)	84, 462, 809, 1222, 1362
BtgZI	GCGATG	2 cut(s)	789, 849
BtsCI	GGATG	6 cut(s)	5, 211, 747, 819, 1194, 1523
BtsIMutI	CAGTG	2 cut(s)	1394, 1433
Cac8I	GCNNGC	5 cut(s)	222, 423, 1721, 1779, 1887
CfoI	GCGC	5 cut(s)	220, 394, 693, 844, 1707
Cfr10I	RCCGGY	1 cut(s)	37
Cfr13I	GGNCC	5 cut(s)	379, 913, 929, 1356, 1376
Cfr42I	CCGCGG	1 cut(s)	87
CseI	GACGC	2 cut(s)	492, 807
Csp6I	GTAC	3 cut(s)	307, 696, 1714
CviQI	GTAC	3 cut(s)	307, 696, 1714
DdeI	CTNAG	7 cut(s)	255, 408, 524, 1068, 1527, 1635, 1811
DinI	GGCGCC	1 cut(s)	843
DrdI	GACNNNNNNGTC	1 cut(s)	52
DriI	GACNNNNNGTC	1 cut(s)	502
DseDI	GACNNNNNNGTC	1 cut(s)	52
EaeI	YGGCCR	2 cut(s)	995, 1458
Eam1104I	CTCTTC	2 cut(s)	16, 1178
Eam1105I	GACNNNNNGTC	1 cut(s)	502
EarI	CTCTTC	2 cut(s)	16, 1178
Eco130I	CCWWGG	2 cut(s)	462, 1222
Eco31I	GGTCTC	1 cut(s)	1732
Eco47I	GGWCC	3 cut(s)	379, 913, 1376
Eco57I	CTGAAG	2 cut(s)	1538, 1855
Eco81I	CCTNAGG	1 cut(s)	408
Eco88I	CYCGRG	3 cut(s)	30, 706, 1421
Eco91I	GGTNACC	1 cut(s)	935
EcoO109I	RGGNCCY	1 cut(s)	913
EcoO65I	GGTNACC	1 cut(s)	935
EcoRI	GAATTC	2 cut(s)	1865, 2012
EcoRII	CCWGG	3 cut(s)	92, 992, 1749
EcoT14I	CCWWGG	2 cut(s)	462, 1222
EcoT22I	ATGCAT	2 cut(s)	423, 1922
EgeI	GGCGCC	1 cut(s)	843
EheI	GGCGCC	1 cut(s)	843
ErhI	CCWWGG	2 cut(s)	462, 1222
Esp3I	CGTCTC	2 cut(s)	533, 825
FaqI	GGGAC	4 cut(s)	839, 1664, 1696, 1740
FauI	CCCGC	2 cut(s)	213, 1716
FokI	GGATG	5 cut(s)	198, 734, 826, 1201, 1530
FspBI	CTAG	7 cut(s)	771, 977, 1058, 1176, 1283, 1886, 1952
GlaI	GCGC	5 cut(s)	219, 393, 692, 843, 1706
GsaI	CCCAGC	1 cut(s)	1885
HaeII	RGCGCY	1 cut(s)	845
HaeIII	GGCC	6 cut(s)	629, 931, 997, 1357, 1460, 1749
HgaI	GACGC	2 cut(s)	492, 807
HhaI	GCGC	5 cut(s)	220, 394, 693, 844, 1707
Hin1I	GRCGYC	3 cut(s)	503, 818, 842
Hin6I	GCGC	5 cut(s)	218, 392, 691, 842, 1705
HinP1I	GCGC	5 cut(s)	218, 392, 691, 842, 1705
HincII	GTYRAC	2 cut(s)	585, 885
HindII	GTYRAC	2 cut(s)	585, 885
HinfI	GANTC	7 cut(s)	28, 197, 367, 593, 704, 859, 1249
HphI	GGTGA	2 cut(s)	52, 1156
Hpy166II	GTNNAC	3 cut(s)	585, 885, 1936
Hpy188III	TCNNGA	9 cut(s)	143, 410, 488, 577, 856, 911, 1421, 1634, 1681
Hpy8I	GTNNAC	3 cut(s)	585, 885, 1936
Hpy99I	CGWCG	2 cut(s)	58, 265
HpyAV	CCTTC	8 cut(s)	317, 1011, 1197, 1221, 1559, 1843, 1849, 1909
HpyCH4III	ACNGT	4 cut(s)	49, 544, 720, 1820
HpyF10VI	GCNNNNNNNGC	9 cut(s)	95, 215, 973, 1138, 1388, 1397, 1424, 1799, 1903
HpyF3I	CTNAG	7 cut(s)	255, 408, 524, 1068, 1527, 1635, 1811
Hsp92I	GRCGYC	3 cut(s)	503, 818, 842
HspAI	GCGC	5 cut(s)	218, 392, 691, 842, 1705
KasI	GGCGCC	1 cut(s)	841
Kpn2I	TCCGGA	1 cut(s)	487
KspI	CCGCGG	1 cut(s)	87
LmnI	GCTCC	4 cut(s)	397, 564, 1387, 1423
Lsp1109I	GCAGC	7 cut(s)	141, 586, 737, 848, 1400, 1439, 1985
MaeI	CTAG	7 cut(s)	771, 977, 1058, 1176, 1283, 1886, 1952
MaeIII	GTNAC	5 cut(s)	191, 639, 935, 1091, 1212
MfeI	CAATTG	2 cut(s)	1303, 1662
MflI	RGATCY	4 cut(s)	249, 265, 313, 1031
MlsI	TGGCCA	1 cut(s)	997
MluNI	TGGCCA	1 cut(s)	997
Mly113I	GGCGCC	1 cut(s)	842
MlyI	GAGTC	4 cut(s)	22, 602, 698, 853
MmeI	TCCRAC	3 cut(s)	243, 1078, 1941
Mox20I	TGGCCA	1 cut(s)	997
Mph1103I	ATGCAT	2 cut(s)	423, 1922
MroI	TCCGGA	1 cut(s)	487
MscI	TGGCCA	1 cut(s)	997
MseI	TTAA	2 cut(s)	777, 1494
MslI	CAYNNNNRTG	4 cut(s)	287, 461, 808, 1221
Msp20I	TGGCCA	1 cut(s)	997
MspA1I	CMGCKG	4 cut(s)	86, 154, 599, 839
MspR9I	CCNGG	5 cut(s)	94, 933, 994, 1040, 1751
MunI	CAATTG	2 cut(s)	1303, 1662
Mva1269I	GAATGC	1 cut(s)	1970
MvaI	CCWGG	3 cut(s)	94, 994, 1751
MvnI	CGCG	3 cut(s)	86, 220, 693
MwoI	GCNNNNNNNGC	9 cut(s)	95, 215, 973, 1138, 1388, 1397, 1424, 1799, 1903
NarI	GGCGCC	1 cut(s)	842
NciI	CCSGG	2 cut(s)	933, 1040
NcoI	CCATGG	2 cut(s)	462, 1222
NheI	GCTAGC	1 cut(s)	1885
NlaIV	GGNNCC	7 cut(s)	36, 486, 843, 915, 1419, 1547, 1768
NmeAIII	GCCGAG	2 cut(s)	44, 577
NmuCI	GTSAC	1 cut(s)	1212
NsiI	ATGCAT	2 cut(s)	423, 1922
NspI	RCATGY	3 cut(s)	425, 1705, 1777
PaeI	GCATGC	1 cut(s)	425
PcsI	WCGNNNNNNNCGW	2 cut(s)	71, 336
PctI	GAATGC	1 cut(s)	1970
PfeI	GAWTC	3 cut(s)	197, 367, 1249
PflFI	GACNNNGTC	2 cut(s)	49, 1210
PfoI	TCCNGGA	1 cut(s)	1038
PleI	GAGTC	4 cut(s)	22, 601, 698, 853
PluTI	GGCGCC	1 cut(s)	845
PpsI	GAGTC	4 cut(s)	22, 601, 698, 853
PpuMI	RGGWCCY	1 cut(s)	913
PshBI	ATTAAT	1 cut(s)	1494
PsiI	TTATAA	1 cut(s)	1479
Psp5II	RGGWCCY	1 cut(s)	913
Psp6I	CCWGG	3 cut(s)	92, 992, 1749
PspEI	GGTNACC	1 cut(s)	935
PspFI	CCCAGC	1 cut(s)	1881
PspGI	CCWGG	3 cut(s)	92, 992, 1749
PspN4I	GGNNCC	7 cut(s)	36, 486, 843, 915, 1419, 1547, 1768
PspPI	GGNCC	5 cut(s)	379, 913, 929, 1356, 1376
PspPPI	RGGWCCY	1 cut(s)	913
PstI	CTGCAG	1 cut(s)	1390
PsuI	RGATCY	4 cut(s)	249, 265, 313, 1031
PsyI	GACNNNGTC	2 cut(s)	49, 1210
PvuII	CAGCTG	1 cut(s)	154
RsaI	GTAC	3 cut(s)	308, 697, 1715
RsaNI	GTAC	3 cut(s)	307, 696, 1714
RseI	CAYNNNNRTG	4 cut(s)	287, 461, 808, 1221
SacII	CCGCGG	1 cut(s)	87
SaqAI	TTAA	2 cut(s)	777, 1494
Sau96I	GGNCC	5 cut(s)	379, 913, 929, 1356, 1376
SchI	GAGTC	4 cut(s)	22, 602, 698, 853
ScrFI	CCNGG	5 cut(s)	94, 933, 994, 1040, 1751
SfcI	CTRYAG	2 cut(s)	1386, 1708
SfoI	GGCGCC	1 cut(s)	843
Sfr303I	CCGCGG	1 cut(s)	87
SgrBI	CCGCGG	1 cut(s)	87
SinI	GGWCC	3 cut(s)	379, 913, 1376
SmiMI	CAYNNNNRTG	4 cut(s)	287, 461, 808, 1221
SmlI	CTYRAG	2 cut(s)	141, 656
SmoI	CTYRAG	2 cut(s)	141, 656
SphI	GCATGC	1 cut(s)	425
SspDI	GGCGCC	1 cut(s)	841
SspI	AATATT	1 cut(s)	1121
SspMI	CTAG	7 cut(s)	771, 977, 1058, 1176, 1283, 1886, 1952
StyD4I	CCNGG	5 cut(s)	92, 931, 992, 1038, 1749
StyI	CCWWGG	2 cut(s)	462, 1222
TaaI	ACNGT	4 cut(s)	49, 544, 720, 1820
TaqI	TCGA	4 cut(s)	26, 242, 339, 591
TauI	GCSGC	4 cut(s)	89, 842, 1319, 1370
TfiI	GAWTC	3 cut(s)	197, 367, 1249
Tru1I	TTAA	2 cut(s)	777, 1494
Tru9I	TTAA	2 cut(s)	777, 1494
TscAI	CASTG	2 cut(s)	1401, 1440
TseFI	GTSAC	1 cut(s)	1212
TseI	GCWGC	7 cut(s)	154, 599, 725, 836, 1388, 1427, 1973
Tsp45I	GTSAC	1 cut(s)	1212
TspDTI	ATGAA	4 cut(s)	647, 993, 1775, 2005
TspGWI	ACGGA	3 cut(s)	870, 1110, 1668
TspRI	CASTG	2 cut(s)	1401, 1440
Tth111I	GACNNNGTC	2 cut(s)	49, 1210
VpaK11BI	GGWCC	3 cut(s)	379, 913, 1376
VspI	ATTAAT	1 cut(s)	1494
XapI	RAATTY	5 cut(s)	949, 1537, 1656, 1865, 2012
XceI	RCATGY	3 cut(s)	425, 1705, 1777
XcmI	CCANNNNNNNNNTGG	1 cut(s)	241
XspI	CTAG	7 cut(s)	771, 977, 1058, 1176, 1283, 1886, 1952
Zsp2I	ATGCAT	2 cut(s)	423, 1922

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.