Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006662.1

Orthogroup ID

OG0008051

Physical Location & Seq

Genomic Coordinates Reverse (-)

3774 .. 6628

Gene Structure 2855 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006662.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2277 bp

atggatggagtgcaagttcaagtccacggcaaccaccaccaagatctgcatggagaggatcaccacagccagcatctcgtcggcaaagaagtgatgcggaacgatttcggagaagaaggtgacgccgcagatctatggcttgataatgagcaagattctcttctcgctgacgtcaacgacggaactgcttccatcttctgcaatgacttccctcctctgcctgacttcccttgcatgtcatcctcttcatcttcgtcttcgactcgggtgccggtgaagaccgtgtcgtcgtcttcctcggcatcttcgtcttcttccgcggcttcctgggcggttctcaaatcagatgcggaggataataacaattatcattctcaagattatcagcagcaacaagacaacaacaacaattactactctcgtaacgattcggttgatgcacatccggcgggggcgttgtcctccaccgcctcgatggagatctctcagccgtcagatctcggaatggagtgcatggacatgatggagactttcgggtacatagatctgttcgaaggcaacgagttgttcgacccgtcttccattttccaaaacgagaatccaatgatggaccaattccaagcgcaggagcaacctcctcaggaacagctgcatgcagacaatcaaacctcacacccacaagagaacatgaccatgggagatcagagcaacaaggttccggaggacgacatggcgtctgtgttcttggagtggctgaggtcaaaccgagagacggtttcagccgaggatttgaggagcgtgaagatcaagaagtcaacaatcgagtccgccgctaggcgtttgggtggaggcaaagaggcgatgaagcagttactcaaactggtgcttgagtgggttcaaactaaccatctccaaaagaggcgcggtactaaagactcggggatacaacagtatgcagtagacccatttcaaaacgccatccctaaccctaaccctagtcttaatcctacacaaaatcctcccataacatcgctgtggatggcgtctccccagtatgatgcagcggcgcccattttagtcccgactccatctcacgtgggttatccgtcaactccgatgatggggtttatgggtcaggacccttttggaaacgggccgggttaccagcaaccaatatcagatcaataccagcatcaaatgctagagactgcaccaacctggccgccttcatctccatttatgggcaacaattatggatctttcccggatagtaatatccaactagcacctcctcagcatcagcaaccgctttccggttacggagggcagtatggtcagtatcaatattttcaagggcaatcaggtgagccgcagctggtgaggttagggtcttcggcaactaaagaggctaggaagaagaggatgcaaaggcagagaaggactttgtcacaccaccatggaaggcatcatggacaccaacagaatcagcatcctaatcaaatgccggatcaaaggctagttgggaacgccgatcacaattgcactactgccgcaatgggcaatccggctgcttctaactggttttattggcccaccacggcggctggtggtcctgctcctgcagcctcaccggcaatgatgcaaacgatggctcccgaggcagcaccattggtgcttccagttgatcgtccggccagtcaagggcagaattataatccgggccggattaatacacaggaaaggcgacagggatggagacctgagaataagaatttgaggttccttcttcagaaagtgttgaagcaaagtgatgtgggcaatcttggaagaattgttttgccaaaagtaaaagaagccgaaacccatcttcctgagttagaggcaagggatggaatttcaattgcgatggaagacatcgggacttctcgtgtatggaacatgcgctataggtactggcccaacaacaaaagcaggatgtatctccttgaaaacacaggagattttgtgagggcaaatggactccaagaaggggacttcatagtcatctattcagacgtcaagtgtaacaaatatagaccaaaaggccaggaaagtcgcaaaggaaccaacatgcaagcactccatctggcaacaatggttcgtcatctaagaaacagtaaaggaagaaagaagaagaagaaggagaaggaagctgaattcttcagagaaacccagctagctcaaccgcccttccggcaaagatggtctagggttgttggaatgcagagcagcccttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000988 GO:0000989 GO:0001076 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009657 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010154 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031930 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0048316 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0071840 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

Protein Analysis

758

Amino Acids

84.89

Weight (kDa)

6.18

Isoelectric Point (pI)

52.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24650
fragaria_vesca	FvH4_2g19630 FvH4_2g19630
malus_domestica	MD05G1181100.v1.1 MD10G1169900.v1.1
prunus_persica	Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0285371
rosa_laevigata	RLG00000012648
rosa_multiflora	Rmu_co8422167.1_g000001 Rmu_co8482611.1_g000001 Rmu_sc0006662.1_g000002 Rmu_sc0012535.1_g000011
rosa_roxburghii	Rroxscaffold_7G00183310
rosa_rugosa	Rorug06G0173900
rosa_samantha	Rh6AG284600 Rh6BG285800 Rh6CG286900 Rh6DG279900
rosa_wichuraiana	Rw6G024500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1713
AasI	GACNNNNNNGTC	2 cut(s)	286, 2039
AatII	GACGTC	2 cut(s)	174, 2058
AccB1I	GGYRCC	2 cut(s)	268, 1066
AccI	GTMKAC	1 cut(s)	960
AccII	CGCG	2 cut(s)	320, 924
AccIII	TCCGGA	1 cut(s)	718
AclWI	GGATC	3 cut(s)	66, 1264, 1515
AcoI	YGGCCR	2 cut(s)	1220, 1692
AcsI	RAATTY	3 cut(s)	1771, 1893, 2195
AcuI	CTGAAG	2 cut(s)	1772, 2185
AcvI	CACGTG	1 cut(s)	1096
AcyI	GRCGYC	6 cut(s)	123, 171, 734, 1043, 1067, 2055
AfaI	GTAC	3 cut(s)	539, 928, 1952
AfiI	CCNNNNNNNGG	8 cut(s)	625, 772, 834, 1121, 1241, 1313, 1701, 2029
AgsI	TTSAA	7 cut(s)	20, 899, 971, 1352, 1801, 1899, 1988
AhdI	GACNNNNNGTC	1 cut(s)	733
AjnI	CCWGG	3 cut(s)	326, 1217, 2085
AloI	GAACNNNNNNTCC	1 cut(s)	32
AluBI	AGCT	5 cut(s)	649, 1375, 2192, 2215, 2219
AluI	AGCT	5 cut(s)	649, 1375, 2192, 2215, 2219
Alw26I	GTCTC	5 cut(s)	521, 764, 1050, 1199, 1750
AlwI	GGATC	3 cut(s)	66, 1264, 1515
Ama87I	CYCGRG	3 cut(s)	264, 937, 1655
Aor13HI	TCCGGA	1 cut(s)	718
AoxI	GGCC	7 cut(s)	1154, 1220, 1589, 1692, 1720, 1955, 2083
ApeKI	GCWGC	8 cut(s)	388, 649, 1061, 1372, 1568, 1622, 1661, 2268
ApoI	RAATTY	3 cut(s)	1771, 1893, 2195
AseI	ATTAAT	1 cut(s)	1728
Asp700I	GAANNNNTTC	2 cut(s)	104, 187
AspLEI	GCGC	4 cut(s)	625, 924, 1069, 1944
AspS9I	GGNCC	7 cut(s)	610, 1138, 1154, 1590, 1610, 1720, 1956
AsuC2I	CCSGG	3 cut(s)	1158, 1265, 1719
AsuHPI	GGTGA	6 cut(s)	53, 131, 286, 1376, 1390, 1620
AsuII	TTCGAA	1 cut(s)	552
AsuNHI	GCTAGC	1 cut(s)	2215
AvaI	CYCGRG	3 cut(s)	264, 937, 1655
AvaII	GGWCC	3 cut(s)	610, 1138, 1610
AxyI	CCTNAGG	1 cut(s)	639
BaeI	ACNNNNGTAYC	2 cut(s)	935, 968
BanI	GGYRCC	2 cut(s)	268, 1066
BauI	CACGAG	1 cut(s)	1926
BbrPI	CACGTG	1 cut(s)	1096
BbsI	GAAGAC	7 cut(s)	249, 284, 285, 303, 570, 1383, 1917
BbvCI	CCTCAGC	2 cut(s)	755, 1293
BbvI	GCAGC	7 cut(s)	400, 636, 1073, 1384, 1555, 1634, 1673
BceAI	ACGGC	3 cut(s)	43, 475, 1614
BcgI	CGANNNNNNTGC	4 cut(s)	167, 201, 250, 284
BciT130I	CCWGG	3 cut(s)	328, 1219, 2087
BciVI	GTATCC	1 cut(s)	936
BcnI	CCSGG	3 cut(s)	1158, 1265, 1719
BcoDI	GTCTC	5 cut(s)	521, 764, 1050, 1199, 1750
BfaI	CTAG	8 cut(s)	834, 996, 1202, 1283, 1410, 1517, 2216, 2247
BfmI	CTRYAG	2 cut(s)	1620, 1945
BfoI	RGCGCY	1 cut(s)	1070
BfuI	GTATCC	1 cut(s)	936
BglI	GCCNNNNNGGC	2 cut(s)	1631, 2233
BglII	AGATCT	5 cut(s)	43, 130, 480, 496, 544
Bme1390I	CCNGG	6 cut(s)	328, 1158, 1219, 1265, 1719, 2087
Bme18I	GGWCC	3 cut(s)	610, 1138, 1610
BmeRI	GACNNNNNGTC	1 cut(s)	733
BmeT110I	CYCGRG	3 cut(s)	264, 937, 1655
BmgT120I	GGNCC	7 cut(s)	610, 1138, 1154, 1590, 1610, 1720, 1956
BmiI	GGNNCC	7 cut(s)	270, 717, 1068, 1140, 1653, 1781, 2104
BmrFI	CCNGG	6 cut(s)	328, 1158, 1219, 1265, 1719, 2087
BmrI	ACTGGG	1 cut(s)	1045
BmtI	GCTAGC	1 cut(s)	2219
BmuI	ACTGGG	1 cut(s)	1045
BpiI	GAAGAC	7 cut(s)	249, 284, 285, 303, 570, 1383, 1917
Bpu10I	CCTNAGC	2 cut(s)	755, 1293
Bpu14I	TTCGAA	1 cut(s)	552
BpuEI	CTTGAG	2 cut(s)	360, 908
BpuMI	CCSGG	3 cut(s)	1158, 1265, 1719
BsaAI	YACGTR	1 cut(s)	1096
BsaBI	GATNNNNATC	2 cut(s)	441, 479
BsaHI	GRCGYC	6 cut(s)	123, 171, 734, 1043, 1067, 2055
BsaI	GGTCTC	1 cut(s)	1750
BsaJI	CCNNGG	9 cut(s)	25, 297, 318, 327, 693, 783, 1456, 1596, 1656
BsaWI	WCCGGW	2 cut(s)	718, 1313
BsaXI	ACNNNNNCTCC	5 cut(s)	30, 1636, 1666, 1989, 2019
Bsc4I	CCNNNNNNNGG	8 cut(s)	625, 772, 834, 1121, 1241, 1313, 1701, 2029
Bse118I	RCCGGY	2 cut(s)	271, 1630
Bse1I	ACTGG	6 cut(s)	885, 1051, 1583, 1679, 1695, 1958
Bse21I	CCTNAGG	1 cut(s)	639
Bse3DI	GCAATG	3 cut(s)	208, 1560, 1641
Bse8I	GATNNNNATC	2 cut(s)	441, 479
BseAI	TCCGGA	1 cut(s)	718
BseBI	CCWGG	3 cut(s)	328, 1219, 2087
BseDI	CCNNGG	9 cut(s)	25, 297, 318, 327, 693, 783, 1456, 1596, 1656
BseJI	GATNNNNATC	2 cut(s)	441, 479
BseLI	CCNNNNNNNGG	8 cut(s)	625, 772, 834, 1121, 1241, 1313, 1701, 2029
BseMI	GCAATG	3 cut(s)	208, 1560, 1641
BseMII	CTCAG	6 cut(s)	500, 653, 746, 1307, 1752, 1863
BseNI	ACTGG	6 cut(s)	885, 1051, 1583, 1679, 1695, 1958
BseRI	GAGGAG	4 cut(s)	204, 627, 808, 1281
BseXI	GCAGC	7 cut(s)	400, 636, 1073, 1384, 1555, 1634, 1673
BseYI	CCCAGC	1 cut(s)	2211
BsgI	GTGCAG	1 cut(s)	1194
Bsh1236I	CGCG	2 cut(s)	320, 924
BshFI	GGCC	7 cut(s)	1156, 1222, 1591, 1694, 1722, 1957, 2085
BshNI	GGYRCC	2 cut(s)	268, 1066
BsiHKCI	CYCGRG	3 cut(s)	264, 937, 1655
BslFI	GGGAC	3 cut(s)	1064, 1933, 2045
BslI	CCNNNNNNNGG	8 cut(s)	625, 772, 834, 1121, 1241, 1313, 1701, 2029
BsmAI	GTCTC	5 cut(s)	521, 764, 1050, 1199, 1750
BsmBI	CGTCTC	2 cut(s)	764, 1050
BsmFI	GGGAC	3 cut(s)	1064, 1933, 2045
BsmI	GAATGC	1 cut(s)	2265
BsnI	GGCC	7 cut(s)	1156, 1222, 1591, 1694, 1722, 1957, 2085
Bso31I	GGTCTC	1 cut(s)	1750
BsoBI	CYCGRG	3 cut(s)	264, 937, 1655
Bsp119I	TTCGAA	1 cut(s)	552
Bsp13I	TCCGGA	1 cut(s)	718
Bsp19I	CCATGG	2 cut(s)	693, 1456
BspANI	GGCC	7 cut(s)	1156, 1222, 1591, 1694, 1722, 1957, 2085
BspCNI	CTCAG	6 cut(s)	499, 652, 747, 1306, 1753, 1864
BspEI	TCCGGA	1 cut(s)	718
BspFNI	CGCG	2 cut(s)	320, 924
BspLI	GGNNCC	7 cut(s)	270, 717, 1068, 1140, 1653, 1781, 2104
BspMAI	CTGCAG	1 cut(s)	1624
BspOI	GCTAGC	1 cut(s)	2219
BspPI	GGATC	3 cut(s)	66, 1264, 1515
BspT104I	TTCGAA	1 cut(s)	552
BspT107I	GGYRCC	2 cut(s)	268, 1066
BspTNI	GGTCTC	1 cut(s)	1750
BsrDI	GCAATG	3 cut(s)	208, 1560, 1641
BsrFI	RCCGGY	2 cut(s)	271, 1630
BsrI	ACTGG	6 cut(s)	885, 1051, 1583, 1679, 1695, 1958
BssAI	RCCGGY	2 cut(s)	271, 1630
BssECI	CCNNGG	9 cut(s)	25, 297, 318, 327, 693, 783, 1456, 1596, 1656
BssNI	GRCGYC	6 cut(s)	123, 171, 734, 1043, 1067, 2055
BssSI	CACGAG	1 cut(s)	1926
BssT1I	CCWWGG	2 cut(s)	693, 1456
Bst2BI	CACGAG	1 cut(s)	1926
Bst2UI	CCWGG	3 cut(s)	328, 1219, 2087
Bst4CI	ACNGT	4 cut(s)	283, 775, 951, 2156
Bst6I	CTCTTC	3 cut(s)	165, 250, 1412
BstACI	GRCGYC	6 cut(s)	123, 171, 734, 1043, 1067, 2055
BstAPI	GCANNNNNTGC	1 cut(s)	1198
BstBAI	YACGTR	1 cut(s)	1096
BstBI	TTCGAA	1 cut(s)	552
BstC8I	GCNNGC	4 cut(s)	71, 654, 2115, 2217
BstDEI	CTNAG	7 cut(s)	486, 639, 755, 1293, 1761, 1872, 2147
BstDSI	CCRYGG	5 cut(s)	25, 318, 693, 1456, 1596
BstEII	GGTNACC	1 cut(s)	1160
BstFNI	CGCG	2 cut(s)	320, 924
BstH2I	RGCGCY	1 cut(s)	1070
BstHHI	GCGC	4 cut(s)	625, 924, 1069, 1944
BstMAI	GTCTC	5 cut(s)	521, 764, 1050, 1199, 1750
BstMWI	GCNNNNNNNGC	7 cut(s)	329, 446, 1198, 1622, 1631, 1658, 2233
BstNI	CCWGG	3 cut(s)	328, 1219, 2087
BstNSI	RCATGY	4 cut(s)	238, 656, 1942, 2113
BstPI	GGTNACC	1 cut(s)	1160
BstSCI	CCNGG	6 cut(s)	326, 1156, 1217, 1263, 1717, 2085
BstSFI	CTRYAG	2 cut(s)	1620, 1945
BstUI	CGCG	2 cut(s)	320, 924
BstV1I	GCAGC	7 cut(s)	400, 636, 1073, 1384, 1555, 1634, 1673
BstV2I	GAAGAC	7 cut(s)	249, 284, 285, 303, 570, 1383, 1917
BstX2I	RGATCY	6 cut(s)	43, 130, 480, 496, 544, 1256
BstYI	RGATCY	6 cut(s)	43, 130, 480, 496, 544, 1256
Bsu36I	CCTNAGG	1 cut(s)	639
BsuI	GTATCC	1 cut(s)	936
BsuRI	GGCC	7 cut(s)	1156, 1222, 1591, 1694, 1722, 1957, 2085
BtgI	CCRYGG	5 cut(s)	25, 318, 693, 1456, 1596
BtgZI	GCGATG	3 cut(s)	875, 1014, 1919
Cac8I	GCNNGC	4 cut(s)	71, 654, 2115, 2217
CfoI	GCGC	4 cut(s)	625, 924, 1069, 1944
Cfr10I	RCCGGY	2 cut(s)	271, 1630
Cfr13I	GGNCC	7 cut(s)	610, 1138, 1154, 1590, 1610, 1720, 1956
Cfr42I	CCGCGG	1 cut(s)	321
CseI	GACGC	3 cut(s)	131, 723, 1032
Csp6I	GTAC	3 cut(s)	538, 927, 1951
CviQI	GTAC	3 cut(s)	538, 927, 1951
DdeI	CTNAG	7 cut(s)	486, 639, 755, 1293, 1761, 1872, 2147
DinI	GGCGCC	1 cut(s)	1068
DrdI	GACNNNNNNGTC	2 cut(s)	286, 2039
DriI	GACNNNNNGTC	1 cut(s)	733
DseDI	GACNNNNNNGTC	2 cut(s)	286, 2039
EaeI	YGGCCR	2 cut(s)	1220, 1692
Eam1104I	CTCTTC	3 cut(s)	165, 250, 1412
Eam1105I	GACNNNNNGTC	1 cut(s)	733
EarI	CTCTTC	3 cut(s)	165, 250, 1412
EciI	GGCGGA	1 cut(s)	817
Eco130I	CCWWGG	2 cut(s)	693, 1456
Eco31I	GGTCTC	1 cut(s)	1750
Eco47I	GGWCC	3 cut(s)	610, 1138, 1610
Eco57I	CTGAAG	2 cut(s)	1772, 2185
Eco72I	CACGTG	1 cut(s)	1096
Eco81I	CCTNAGG	1 cut(s)	639
Eco88I	CYCGRG	3 cut(s)	264, 937, 1655
Eco91I	GGTNACC	1 cut(s)	1160
EcoO109I	RGGNCCY	1 cut(s)	1138
EcoO65I	GGTNACC	1 cut(s)	1160
EcoRI	GAATTC	1 cut(s)	2195
EcoRII	CCWGG	3 cut(s)	326, 1217, 2085
EcoT14I	CCWWGG	2 cut(s)	693, 1456
EgeI	GGCGCC	1 cut(s)	1068
EheI	GGCGCC	1 cut(s)	1068
ErhI	CCWWGG	2 cut(s)	693, 1456
Esp3I	CGTCTC	2 cut(s)	764, 1050
FalI	AAGNNNNNCTT	2 cut(s)	144, 176
FaqI	GGGAC	3 cut(s)	1064, 1933, 2045
FauI	CCCGC	1 cut(s)	442
FblI	GTMKAC	1 cut(s)	960
FspBI	CTAG	8 cut(s)	834, 996, 1202, 1283, 1410, 1517, 2216, 2247
GlaI	GCGC	4 cut(s)	624, 923, 1068, 1943
GsaI	CCCAGC	1 cut(s)	2215
HaeII	RGCGCY	1 cut(s)	1070
HaeIII	GGCC	7 cut(s)	1156, 1222, 1591, 1694, 1722, 1957, 2085
HgaI	GACGC	3 cut(s)	131, 723, 1032
HhaI	GCGC	4 cut(s)	625, 924, 1069, 1944
Hin1I	GRCGYC	6 cut(s)	123, 171, 734, 1043, 1067, 2055
Hin6I	GCGC	4 cut(s)	623, 922, 1067, 1942
HinP1I	GCGC	4 cut(s)	623, 922, 1067, 1942
HincII	GTYRAC	3 cut(s)	175, 816, 1110
HindII	GTYRAC	3 cut(s)	175, 816, 1110
HinfI	GANTC	9 cut(s)	155, 262, 428, 598, 824, 935, 1084, 1483, 2019
HphI	GGTGA	6 cut(s)	53, 131, 286, 1376, 1390, 1620
Hpy166II	GTNNAC	5 cut(s)	25, 175, 816, 961, 1110
Hpy188III	TCNNGA	9 cut(s)	377, 641, 719, 808, 1081, 1136, 1655, 1871, 1918
Hpy8I	GTNNAC	5 cut(s)	25, 175, 816, 961, 1110
Hpy99I	CGWCG	3 cut(s)	83, 182, 292
HpyCH4III	ACNGT	4 cut(s)	283, 775, 951, 2156
HpyCH4IV	ACGT	3 cut(s)	171, 1095, 2055
HpyF10VI	GCNNNNNNNGC	7 cut(s)	329, 446, 1198, 1622, 1631, 1658, 2233
HpyF3I	CTNAG	7 cut(s)	486, 639, 755, 1293, 1761, 1872, 2147
HpySE526I	ACGT	3 cut(s)	171, 1095, 2055
Hsp92I	GRCGYC	6 cut(s)	123, 171, 734, 1043, 1067, 2055
HspAI	GCGC	4 cut(s)	623, 922, 1067, 1942
KasI	GGCGCC	1 cut(s)	1066
Kpn2I	TCCGGA	1 cut(s)	718
KspI	CCGCGG	1 cut(s)	321
LmnI	GCTCC	4 cut(s)	628, 795, 1621, 1657
Lsp1109I	GCAGC	7 cut(s)	400, 636, 1073, 1384, 1555, 1634, 1673
MaeI	CTAG	8 cut(s)	834, 996, 1202, 1283, 1410, 1517, 2216, 2247
MaeII	ACGT	3 cut(s)	171, 1095, 2055
MaeIII	GTNAC	7 cut(s)	119, 422, 870, 1160, 1316, 1446, 2063
MfeI	CAATTG	2 cut(s)	1537, 1899
MflI	RGATCY	6 cut(s)	43, 130, 480, 496, 544, 1256
Mly113I	GGCGCC	1 cut(s)	1067
MlyI	GAGTC	5 cut(s)	256, 833, 929, 1078, 2013
MmeI	TCCRAC	2 cut(s)	1303, 2236
MroI	TCCGGA	1 cut(s)	718
MroXI	GAANNNNTTC	2 cut(s)	104, 187
MseI	TTAA	2 cut(s)	1002, 1728
MslI	CAYNNNNRTG	4 cut(s)	518, 692, 1033, 1455
MspA1I	CMGCKG	4 cut(s)	320, 649, 1064, 1375
MspR9I	CCNGG	6 cut(s)	328, 1158, 1219, 1265, 1719, 2087
MunI	CAATTG	2 cut(s)	1537, 1899
Mva1269I	GAATGC	1 cut(s)	2265
MvaI	CCWGG	3 cut(s)	328, 1219, 2087
MvnI	CGCG	2 cut(s)	320, 924
MwoI	GCNNNNNNNGC	7 cut(s)	329, 446, 1198, 1622, 1631, 1658, 2233
NarI	GGCGCC	1 cut(s)	1067
NciI	CCSGG	3 cut(s)	1158, 1265, 1719
NcoI	CCATGG	2 cut(s)	693, 1456
NheI	GCTAGC	1 cut(s)	2215
NlaIV	GGNNCC	7 cut(s)	270, 717, 1068, 1140, 1653, 1781, 2104
NmeAIII	GCCGAG	2 cut(s)	278, 808
NmuCI	GTSAC	2 cut(s)	119, 1446
NspI	RCATGY	4 cut(s)	238, 656, 1942, 2113
NspV	TTCGAA	1 cut(s)	552
PaeI	GCATGC	1 cut(s)	656
PcsI	WCGNNNNNNNCGW	3 cut(s)	305, 558, 567
PctI	GAATGC	1 cut(s)	2265
PdmI	GAANNNNTTC	2 cut(s)	104, 187
PfeI	GAWTC	4 cut(s)	155, 428, 598, 1483
PflFI	GACNNNGTC	2 cut(s)	283, 1444
PfoI	TCCNGGA	1 cut(s)	1263
PleI	GAGTC	5 cut(s)	256, 832, 929, 1078, 2013
PluTI	GGCGCC	1 cut(s)	1070
PmaCI	CACGTG	1 cut(s)	1096
PmlI	CACGTG	1 cut(s)	1096
PpsI	GAGTC	5 cut(s)	256, 832, 929, 1078, 2013
Ppu21I	YACGTR	1 cut(s)	1096
PpuMI	RGGWCCY	1 cut(s)	1138
PshBI	ATTAAT	1 cut(s)	1728
PsiI	TTATAA	1 cut(s)	1713
Psp5II	RGGWCCY	1 cut(s)	1138
Psp6I	CCWGG	3 cut(s)	326, 1217, 2085
PspCI	CACGTG	1 cut(s)	1096
PspEI	GGTNACC	1 cut(s)	1160
PspFI	CCCAGC	1 cut(s)	2211
PspGI	CCWGG	3 cut(s)	326, 1217, 2085
PspN4I	GGNNCC	7 cut(s)	270, 717, 1068, 1140, 1653, 1781, 2104
PspPI	GGNCC	7 cut(s)	610, 1138, 1154, 1590, 1610, 1720, 1956
PspPPI	RGGWCCY	1 cut(s)	1138
PstI	CTGCAG	1 cut(s)	1624
PsuI	RGATCY	6 cut(s)	43, 130, 480, 496, 544, 1256
PsyI	GACNNNGTC	2 cut(s)	283, 1444
PvuII	CAGCTG	2 cut(s)	649, 1375
RsaI	GTAC	3 cut(s)	539, 928, 1952
RsaNI	GTAC	3 cut(s)	538, 927, 1951
RseI	CAYNNNNRTG	4 cut(s)	518, 692, 1033, 1455
SacII	CCGCGG	1 cut(s)	321
SaqAI	TTAA	2 cut(s)	1002, 1728
Sau96I	GGNCC	7 cut(s)	610, 1138, 1154, 1590, 1610, 1720, 1956
SchI	GAGTC	5 cut(s)	256, 833, 929, 1078, 2013
ScrFI	CCNGG	6 cut(s)	328, 1158, 1219, 1265, 1719, 2087
SfcI	CTRYAG	2 cut(s)	1620, 1945
SfoI	GGCGCC	1 cut(s)	1068
Sfr303I	CCGCGG	1 cut(s)	321
SfuI	TTCGAA	1 cut(s)	552
SgrBI	CCGCGG	1 cut(s)	321
SinI	GGWCC	3 cut(s)	610, 1138, 1610
SmiMI	CAYNNNNRTG	4 cut(s)	518, 692, 1033, 1455
SmlI	CTYRAG	2 cut(s)	375, 887
SmoI	CTYRAG	2 cut(s)	375, 887
SphI	GCATGC	1 cut(s)	656
SspDI	GGCGCC	1 cut(s)	1066
SspI	AATATT	1 cut(s)	1346
SspMI	CTAG	8 cut(s)	834, 996, 1202, 1283, 1410, 1517, 2216, 2247
StyD4I	CCNGG	6 cut(s)	326, 1156, 1217, 1263, 1717, 2085
StyI	CCWWGG	2 cut(s)	693, 1456
TaaI	ACNGT	4 cut(s)	283, 775, 951, 2156
TaiI	ACGT	3 cut(s)	174, 1098, 2058
TaqI	TCGA	5 cut(s)	260, 473, 552, 570, 822
TauI	GCSGC	8 cut(s)	128, 323, 833, 1067, 1225, 1372, 1553, 1604
TfiI	GAWTC	4 cut(s)	155, 428, 598, 1483
Tru1I	TTAA	2 cut(s)	1002, 1728
Tru9I	TTAA	2 cut(s)	1002, 1728
TseFI	GTSAC	2 cut(s)	119, 1446
TseI	GCWGC	8 cut(s)	388, 649, 1061, 1372, 1568, 1622, 1661, 2268
Tsp45I	GTSAC	2 cut(s)	119, 1446
TspDTI	ATGAA	4 cut(s)	237, 878, 1218, 2026
TspGWI	ACGGA	3 cut(s)	195, 1095, 1335
Tth111I	GACNNNGTC	2 cut(s)	283, 1444
VpaK11BI	GGWCC	3 cut(s)	610, 1138, 1610
VspI	ATTAAT	1 cut(s)	1728
XapI	RAATTY	3 cut(s)	1771, 1893, 2195
XceI	RCATGY	4 cut(s)	238, 656, 1942, 2113
XcmI	CCANNNNNNNNNTGG	2 cut(s)	47, 472
XmiI	GTMKAC	1 cut(s)	960
XmnI	GAANNNNTTC	2 cut(s)	104, 187
XspI	CTAG	8 cut(s)	834, 996, 1202, 1283, 1410, 1517, 2216, 2247
ZraI	GACGTC	2 cut(s)	172, 2056

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.