B3 domain-containing transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24650 |
| fragaria_vesca | FvH4_2g19630 FvH4_2g19630 |
| malus_domestica | MD05G1181100.v1.1 MD10G1169900.v1.1 |
| prunus_persica | Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0285371 |
| rosa_laevigata | RLG00000012648 |
| rosa_multiflora | Rmu_co8422167.1_g000001 Rmu_co8482611.1_g000001 Rmu_sc0006662.1_g000002 Rmu_sc0012535.1_g000011 |
| rosa_roxburghii | Rroxscaffold_7G00183310 |
| rosa_rugosa | Rorug06G0173900 |
| rosa_samantha | Rh6AG284600 Rh6BG285800 Rh6CG286900 Rh6DG279900 |
| rosa_wichuraiana | Rw6G024500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 286 |
| AatII | GACGTC | 1 cut(s) | 174 |
| AccB1I | GGYRCC | 1 cut(s) | 268 |
| AccI | GTMKAC | 1 cut(s) | 960 |
| AccII | CGCG | 2 cut(s) | 320, 924 |
| AccIII | TCCGGA | 1 cut(s) | 718 |
| AclWI | GGATC | 1 cut(s) | 66 |
| AcyI | GRCGYC | 3 cut(s) | 123, 171, 734 |
| AfaI | GTAC | 2 cut(s) | 539, 928 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 625, 772, 834 |
| AgsI | TTSAA | 3 cut(s) | 20, 899, 971 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 733 |
| AjnI | CCWGG | 1 cut(s) | 326 |
| AloI | GAACNNNNNNTCC | 1 cut(s) | 32 |
| AluBI | AGCT | 1 cut(s) | 649 |
| AluI | AGCT | 1 cut(s) | 649 |
| Alw26I | GTCTC | 2 cut(s) | 521, 764 |
| AlwI | GGATC | 1 cut(s) | 66 |
| Ama87I | CYCGRG | 2 cut(s) | 264, 937 |
| Aor13HI | TCCGGA | 1 cut(s) | 718 |
| ApeKI | GCWGC | 2 cut(s) | 388, 649 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 104, 187 |
| AspLEI | GCGC | 2 cut(s) | 625, 924 |
| AspS9I | GGNCC | 1 cut(s) | 610 |
| AsuHPI | GGTGA | 3 cut(s) | 53, 131, 286 |
| AsuII | TTCGAA | 1 cut(s) | 552 |
| AvaI | CYCGRG | 2 cut(s) | 264, 937 |
| AvaII | GGWCC | 1 cut(s) | 610 |
| AxyI | CCTNAGG | 1 cut(s) | 639 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 935, 968 |
| BanI | GGYRCC | 1 cut(s) | 268 |
| BbsI | GAAGAC | 5 cut(s) | 249, 284, 285, 303, 570 |
| BbvCI | CCTCAGC | 1 cut(s) | 755 |
| BbvI | GCAGC | 2 cut(s) | 400, 636 |
| BccI | CCATC | 6 cut(s) | 200, 469, 517, 601, 915, 986 |
| BceAI | ACGGC | 2 cut(s) | 43, 475 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 167, 201, 250, 284 |
| BciT130I | CCWGG | 1 cut(s) | 328 |
| BciVI | GTATCC | 1 cut(s) | 936 |
| BcoDI | GTCTC | 2 cut(s) | 521, 764 |
| BfaI | CTAG | 2 cut(s) | 834, 996 |
| BfuI | GTATCC | 1 cut(s) | 936 |
| BglII | AGATCT | 5 cut(s) | 43, 130, 480, 496, 544 |
| BisI | GCNGC | 5 cut(s) | 126, 321, 389, 650, 831 |
| BlsI | GCNGC | 5 cut(s) | 127, 322, 390, 651, 832 |
| Bme1390I | CCNGG | 1 cut(s) | 328 |
| Bme18I | GGWCC | 1 cut(s) | 610 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 733 |
| BmeT110I | CYCGRG | 2 cut(s) | 264, 937 |
| BmgT120I | GGNCC | 1 cut(s) | 610 |
| BmiI | GGNNCC | 2 cut(s) | 270, 717 |
| BmrFI | CCNGG | 1 cut(s) | 328 |
| BmsI | GCATC | 5 cut(s) | 82, 84, 311, 337, 427 |
| BpiI | GAAGAC | 5 cut(s) | 249, 284, 285, 303, 570 |
| Bpu10I | CCTNAGC | 1 cut(s) | 755 |
| Bpu14I | TTCGAA | 1 cut(s) | 552 |
| BpuEI | CTTGAG | 2 cut(s) | 360, 908 |
| BsaBI | GATNNNNATC | 2 cut(s) | 441, 479 |
| BsaHI | GRCGYC | 3 cut(s) | 123, 171, 734 |
| BsaJI | CCNNGG | 6 cut(s) | 25, 297, 318, 327, 693, 783 |
| BsaWI | WCCGGW | 1 cut(s) | 718 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 30 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 625, 772, 834 |
| Bse118I | RCCGGY | 1 cut(s) | 271 |
| Bse1I | ACTGG | 1 cut(s) | 885 |
| Bse21I | CCTNAGG | 1 cut(s) | 639 |
| Bse3DI | GCAATG | 1 cut(s) | 208 |
| Bse8I | GATNNNNATC | 2 cut(s) | 441, 479 |
| BseAI | TCCGGA | 1 cut(s) | 718 |
| BseBI | CCWGG | 1 cut(s) | 328 |
| BseDI | CCNNGG | 6 cut(s) | 25, 297, 318, 327, 693, 783 |
| BseGI | GGATG | 4 cut(s) | 10, 239, 442, 978 |
| BseJI | GATNNNNATC | 2 cut(s) | 441, 479 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 625, 772, 834 |
| BseMI | GCAATG | 1 cut(s) | 208 |
| BseMII | CTCAG | 3 cut(s) | 500, 653, 746 |
| BseNI | ACTGG | 1 cut(s) | 885 |
| BseRI | GAGGAG | 3 cut(s) | 204, 627, 808 |
| BseXI | GCAGC | 2 cut(s) | 400, 636 |
| Bsh1236I | CGCG | 2 cut(s) | 320, 924 |
| BshNI | GGYRCC | 1 cut(s) | 268 |
| BsiHKCI | CYCGRG | 2 cut(s) | 264, 937 |
| BsiSI | CCGG | 3 cut(s) | 272, 446, 719 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 625, 772, 834 |
| BsmAI | GTCTC | 2 cut(s) | 521, 764 |
| BsmBI | CGTCTC | 1 cut(s) | 764 |
| BsoBI | CYCGRG | 2 cut(s) | 264, 937 |
| Bsp119I | TTCGAA | 1 cut(s) | 552 |
| Bsp13I | TCCGGA | 1 cut(s) | 718 |
| Bsp143I | GATC | 8 cut(s) | 43, 58, 130, 480, 496, 544, 700, 804 |
| Bsp19I | CCATGG | 1 cut(s) | 693 |
| BspCNI | CTCAG | 3 cut(s) | 499, 652, 747 |
| BspEI | TCCGGA | 1 cut(s) | 718 |
| BspFNI | CGCG | 2 cut(s) | 320, 924 |
| BspLI | GGNNCC | 2 cut(s) | 270, 717 |
| BspPI | GGATC | 1 cut(s) | 66 |
| BspT104I | TTCGAA | 1 cut(s) | 552 |
| BspT107I | GGYRCC | 1 cut(s) | 268 |
| BsrDI | GCAATG | 1 cut(s) | 208 |
| BsrFI | RCCGGY | 1 cut(s) | 271 |
| BsrI | ACTGG | 1 cut(s) | 885 |
| BssAI | RCCGGY | 1 cut(s) | 271 |
| BssECI | CCNNGG | 6 cut(s) | 25, 297, 318, 327, 693, 783 |
| BssMI | GATC | 8 cut(s) | 43, 58, 130, 480, 496, 544, 700, 804 |
| BssNI | GRCGYC | 3 cut(s) | 123, 171, 734 |
| BssT1I | CCWWGG | 1 cut(s) | 693 |
| Bst2UI | CCWGG | 1 cut(s) | 328 |
| Bst4CI | ACNGT | 3 cut(s) | 283, 775, 951 |
| Bst6I | CTCTTC | 2 cut(s) | 165, 250 |
| BstACI | GRCGYC | 3 cut(s) | 123, 171, 734 |
| BstBI | TTCGAA | 1 cut(s) | 552 |
| BstC8I | GCNNGC | 2 cut(s) | 71, 654 |
| BstDEI | CTNAG | 3 cut(s) | 486, 639, 755 |
| BstDSI | CCRYGG | 3 cut(s) | 25, 318, 693 |
| BstF5I | GGATG | 4 cut(s) | 10, 239, 442, 978 |
| BstFNI | CGCG | 2 cut(s) | 320, 924 |
| BstHHI | GCGC | 2 cut(s) | 625, 924 |
| BstKTI | GATC | 8 cut(s) | 46, 61, 133, 483, 499, 547, 703, 807 |
| BstMAI | GTCTC | 2 cut(s) | 521, 764 |
| BstMBI | GATC | 8 cut(s) | 43, 58, 130, 480, 496, 544, 700, 804 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 329, 446 |
| BstNI | CCWGG | 1 cut(s) | 328 |
| BstNSI | RCATGY | 2 cut(s) | 238, 656 |
| BstSCI | CCNGG | 1 cut(s) | 326 |
| BstUI | CGCG | 2 cut(s) | 320, 924 |
| BstV1I | GCAGC | 2 cut(s) | 400, 636 |
| BstV2I | GAAGAC | 5 cut(s) | 249, 284, 285, 303, 570 |
| BstX2I | RGATCY | 5 cut(s) | 43, 130, 480, 496, 544 |
| BstYI | RGATCY | 5 cut(s) | 43, 130, 480, 496, 544 |
| Bsu36I | CCTNAGG | 1 cut(s) | 639 |
| BsuI | GTATCC | 1 cut(s) | 936 |
| BtgI | CCRYGG | 3 cut(s) | 25, 318, 693 |
| BtgZI | GCGATG | 2 cut(s) | 875, 1014 |
| BtsCI | GGATG | 4 cut(s) | 10, 239, 442, 978 |
| Cac8I | GCNNGC | 2 cut(s) | 71, 654 |
| CfoI | GCGC | 2 cut(s) | 625, 924 |
| Cfr10I | RCCGGY | 1 cut(s) | 271 |
| Cfr13I | GGNCC | 1 cut(s) | 610 |
| Cfr42I | CCGCGG | 1 cut(s) | 321 |
| CseI | GACGC | 2 cut(s) | 131, 723 |
| Csp6I | GTAC | 2 cut(s) | 538, 927 |
| CviAII | CATG | 8 cut(s) | 50, 235, 514, 520, 653, 688, 694, 730 |
| CviJI | RGCY | 7 cut(s) | 69, 139, 323, 490, 649, 754, 782 |
| CviKI_1 | RGCY | 7 cut(s) | 69, 139, 323, 490, 649, 754, 782 |
| CviQI | GTAC | 2 cut(s) | 538, 927 |
| DdeI | CTNAG | 3 cut(s) | 486, 639, 755 |
| DpnI | GATC | 8 cut(s) | 45, 60, 132, 482, 498, 546, 702, 806 |
| DpnII | GATC | 8 cut(s) | 43, 58, 130, 480, 496, 544, 700, 804 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 286 |
| DriI | GACNNNNNGTC | 1 cut(s) | 733 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 286 |
| Eam1104I | CTCTTC | 2 cut(s) | 165, 250 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 733 |
| EarI | CTCTTC | 2 cut(s) | 165, 250 |
| EciI | GGCGGA | 1 cut(s) | 817 |
| Eco130I | CCWWGG | 1 cut(s) | 693 |
| Eco47I | GGWCC | 1 cut(s) | 610 |
| Eco81I | CCTNAGG | 1 cut(s) | 639 |
| Eco88I | CYCGRG | 2 cut(s) | 264, 937 |
| EcoRII | CCWGG | 1 cut(s) | 326 |
| EcoT14I | CCWWGG | 1 cut(s) | 693 |
| ErhI | CCWWGG | 1 cut(s) | 693 |
| Esp3I | CGTCTC | 1 cut(s) | 764 |
| FaeI | CATG | 8 cut(s) | 53, 238, 517, 523, 656, 691, 697, 733 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 144, 176 |
| FatI | CATG | 8 cut(s) | 49, 234, 513, 519, 652, 687, 693, 729 |
| FauI | CCCGC | 1 cut(s) | 442 |
| FblI | GTMKAC | 1 cut(s) | 960 |
| Fnu4HI | GCNGC | 5 cut(s) | 126, 321, 389, 650, 831 |
| FokI | GGATG | 4 cut(s) | 17, 226, 429, 965 |
| Fsp4HI | GCNGC | 5 cut(s) | 126, 321, 389, 650, 831 |
| FspBI | CTAG | 2 cut(s) | 834, 996 |
| GlaI | GCGC | 2 cut(s) | 624, 923 |
| GluI | GCNGC | 5 cut(s) | 126, 321, 389, 650, 831 |
| HapII | CCGG | 3 cut(s) | 272, 446, 719 |
| HgaI | GACGC | 2 cut(s) | 131, 723 |
| HhaI | GCGC | 2 cut(s) | 625, 924 |
| Hin1I | GRCGYC | 3 cut(s) | 123, 171, 734 |
| Hin1II | CATG | 8 cut(s) | 53, 238, 517, 523, 656, 691, 697, 733 |
| Hin6I | GCGC | 2 cut(s) | 623, 922 |
| HinP1I | GCGC | 2 cut(s) | 623, 922 |
| HincII | GTYRAC | 2 cut(s) | 175, 816 |
| HindII | GTYRAC | 2 cut(s) | 175, 816 |
| HinfI | GANTC | 6 cut(s) | 155, 262, 428, 598, 824, 935 |
| HpaII | CCGG | 3 cut(s) | 272, 446, 719 |
| HphI | GGTGA | 3 cut(s) | 53, 131, 286 |
| Hpy166II | GTNNAC | 4 cut(s) | 25, 175, 816, 961 |
| Hpy188I | TCNGA | 5 cut(s) | 110, 346, 496, 503, 705 |
| Hpy188III | TCNNGA | 4 cut(s) | 377, 641, 719, 808 |
| Hpy8I | GTNNAC | 4 cut(s) | 25, 175, 816, 961 |
| Hpy99I | CGWCG | 3 cut(s) | 83, 182, 292 |
| HpyAV | CCTTC | 2 cut(s) | 110, 548 |
| HpyCH4III | ACNGT | 3 cut(s) | 283, 775, 951 |
| HpyCH4IV | ACGT | 1 cut(s) | 171 |
| HpyCH4V | TGCA | 9 cut(s) | 13, 49, 201, 234, 440, 513, 652, 656, 956 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 329, 446 |
| HpyF3I | CTNAG | 3 cut(s) | 486, 639, 755 |
| HpySE526I | ACGT | 1 cut(s) | 171 |
| Hsp92I | GRCGYC | 3 cut(s) | 123, 171, 734 |
| Hsp92II | CATG | 8 cut(s) | 53, 238, 517, 523, 656, 691, 697, 733 |
| HspAI | GCGC | 2 cut(s) | 623, 922 |
| Kpn2I | TCCGGA | 1 cut(s) | 718 |
| KspI | CCGCGG | 1 cut(s) | 321 |
| Kzo9I | GATC | 8 cut(s) | 43, 58, 130, 480, 496, 544, 700, 804 |
| LmnI | GCTCC | 2 cut(s) | 628, 795 |
| Lsp1109I | GCAGC | 2 cut(s) | 400, 636 |
| LweI | GCATC | 5 cut(s) | 82, 84, 311, 337, 427 |
| MaeI | CTAG | 2 cut(s) | 834, 996 |
| MaeII | ACGT | 1 cut(s) | 171 |
| MaeIII | GTNAC | 3 cut(s) | 119, 422, 870 |
| MalI | GATC | 8 cut(s) | 45, 60, 132, 482, 498, 546, 702, 806 |
| MboI | GATC | 8 cut(s) | 43, 58, 130, 480, 496, 544, 700, 804 |
| MflI | RGATCY | 5 cut(s) | 43, 130, 480, 496, 544 |
| MluCI | AATT | 3 cut(s) | 364, 409, 614 |
| MlyI | GAGTC | 3 cut(s) | 256, 833, 929 |
| MroI | TCCGGA | 1 cut(s) | 718 |
| MroXI | GAANNNNTTC | 2 cut(s) | 104, 187 |
| MseI | TTAA | 1 cut(s) | 1002 |
| MslI | CAYNNNNRTG | 2 cut(s) | 518, 692 |
| MspA1I | CMGCKG | 2 cut(s) | 320, 649 |
| MspI | CCGG | 3 cut(s) | 272, 446, 719 |
| MspR9I | CCNGG | 1 cut(s) | 328 |
| MvaI | CCWGG | 1 cut(s) | 328 |
| MvnI | CGCG | 2 cut(s) | 320, 924 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 329, 446 |
| NcoI | CCATGG | 1 cut(s) | 693 |
| NdeII | GATC | 8 cut(s) | 43, 58, 130, 480, 496, 544, 700, 804 |
| NlaIII | CATG | 8 cut(s) | 53, 238, 517, 523, 656, 691, 697, 733 |
| NlaIV | GGNNCC | 2 cut(s) | 270, 717 |
| NmeAIII | GCCGAG | 2 cut(s) | 278, 808 |
| NmuCI | GTSAC | 1 cut(s) | 119 |
| NspI | RCATGY | 2 cut(s) | 238, 656 |
| NspV | TTCGAA | 1 cut(s) | 552 |
| PaeI | GCATGC | 1 cut(s) | 656 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 305, 558, 567 |
| PdmI | GAANNNNTTC | 2 cut(s) | 104, 187 |
| PfeI | GAWTC | 3 cut(s) | 155, 428, 598 |
| PflFI | GACNNNGTC | 1 cut(s) | 283 |
| PkrI | GCNGC | 5 cut(s) | 127, 322, 390, 651, 832 |
| PleI | GAGTC | 3 cut(s) | 256, 832, 929 |
| PpsI | GAGTC | 3 cut(s) | 256, 832, 929 |
| Psp6I | CCWGG | 1 cut(s) | 326 |
| PspGI | CCWGG | 1 cut(s) | 326 |
| PspN4I | GGNNCC | 2 cut(s) | 270, 717 |
| PspPI | GGNCC | 1 cut(s) | 610 |
| PsuI | RGATCY | 5 cut(s) | 43, 130, 480, 496, 544 |
| PsyI | GACNNNGTC | 1 cut(s) | 283 |
| PvuII | CAGCTG | 1 cut(s) | 649 |
| RsaI | GTAC | 2 cut(s) | 539, 928 |
| RsaNI | GTAC | 2 cut(s) | 538, 927 |
| RseI | CAYNNNNRTG | 2 cut(s) | 518, 692 |
| SacII | CCGCGG | 1 cut(s) | 321 |
| SaqAI | TTAA | 1 cut(s) | 1002 |
| SatI | GCNGC | 5 cut(s) | 126, 321, 389, 650, 831 |
| Sau3AI | GATC | 8 cut(s) | 43, 58, 130, 480, 496, 544, 700, 804 |
| Sau96I | GGNCC | 1 cut(s) | 610 |
| SchI | GAGTC | 3 cut(s) | 256, 833, 929 |
| ScrFI | CCNGG | 1 cut(s) | 328 |
| SetI | ASST | 7 cut(s) | 121, 174, 637, 651, 671, 717, 761 |
| SfaNI | GCATC | 5 cut(s) | 82, 84, 311, 337, 427 |
| Sfr303I | CCGCGG | 1 cut(s) | 321 |
| SfuI | TTCGAA | 1 cut(s) | 552 |
| SgrBI | CCGCGG | 1 cut(s) | 321 |
| SinI | GGWCC | 1 cut(s) | 610 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 518, 692 |
| SmlI | CTYRAG | 2 cut(s) | 375, 887 |
| SmoI | CTYRAG | 2 cut(s) | 375, 887 |
| SphI | GCATGC | 1 cut(s) | 656 |
| Sse9I | AATT | 3 cut(s) | 364, 409, 614 |
| SspMI | CTAG | 2 cut(s) | 834, 996 |
| StyD4I | CCNGG | 1 cut(s) | 326 |
| StyI | CCWWGG | 1 cut(s) | 693 |
| TaaI | ACNGT | 3 cut(s) | 283, 775, 951 |
| TaiI | ACGT | 1 cut(s) | 174 |
| TaqI | TCGA | 5 cut(s) | 260, 473, 552, 570, 822 |
| TasI | AATT | 3 cut(s) | 364, 409, 614 |
| TauI | GCSGC | 3 cut(s) | 128, 323, 833 |
| TfiI | GAWTC | 3 cut(s) | 155, 428, 598 |
| Tru1I | TTAA | 1 cut(s) | 1002 |
| Tru9I | TTAA | 1 cut(s) | 1002 |
| TseFI | GTSAC | 1 cut(s) | 119 |
| TseI | GCWGC | 2 cut(s) | 388, 649 |
| Tsp45I | GTSAC | 1 cut(s) | 119 |
| TspDTI | ATGAA | 2 cut(s) | 237, 878 |
| TspGWI | ACGGA | 1 cut(s) | 195 |
| Tth111I | GACNNNGTC | 1 cut(s) | 283 |
| VpaK11BI | GGWCC | 1 cut(s) | 610 |
| XceI | RCATGY | 2 cut(s) | 238, 656 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 47, 472 |
| XmiI | GTMKAC | 1 cut(s) | 960 |
| XmnI | GAANNNNTTC | 2 cut(s) | 104, 187 |
| XspI | CTAG | 2 cut(s) | 834, 996 |
| ZraI | GACGTC | 1 cut(s) | 172 |