Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0008051

Physical Location & Seq

Genomic Coordinates Reverse (-)

26219448 .. 26222277

Gene Structure 2830 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1169900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGAAGGGCGAGCAAGTTCAAGTTCAAGTTCCGGTTCATCACCAACATCAAGATCTGCATGCAGGAGATCTGGATACTCTTGGAGTGGACCCCAGAAAGATGTGGCTTGACGATGACCAAGAAACCACTCTCGATGTGAATGACCCTTCCATCTTCTACAACGACAAGTTCCCTCCTCTCCCTGACTTCCCATGCATGTCCTCCTCCTCCTCTTCATCCTCCACTCCTGCGCCGGTCAAGACAGTCACGTGCTCCTCATCCTCGCCCTCGGTTTCCTCGTCCTCCTCCGCGGCCTCTTGGGCCGTTCTCAAGTCGGACGCGGAGCCCGAAGATGGGGAGAGAAAGCAGCAGCAGCACAACAGTTACCACCACCAGTACTCGCAGATTGATGATCAGACGGTTGATGCGCATGCATTGTCCTCCACCGTCTCGATGGAGATCTCTCAGCCGTTGGATCTCAGTGGCGGAATAGATTGCATGGATGAGATGGGGACTTTTGGTTACATGGATCTGTTTGAATCCAACGAGTGTTTTGACCCTTCTTCCATTTTCCAAAGTGATAGCCTTTTCATGGAGCAGTTTCAACAAGATCAAGATAATCAGCATTTAGCCATGGCCCACCAATTACAAGACCATCATGAAATTGCTACTACTATTCAGTCTAATCCCCAACAACAAAAACAAGTAGTTGGACAGGATGAGGAGAATACTAATAAGGATCAGAGTAATGATAAAAAGGATCCGGATGACATGGCCATGGTGTTCTTGGAGTGGCTGAGGTCCAACAGAGAGACGGTCTCCGCCGAAGACTTGAGAAGTGTGAAGATCAAGAAGTCGACGATCGAGTGCGCCGCCAGGCGCTTGGGCGGAGGAAAAGAGGCCATGAAGCAGTTGCTTAAACTTGTCCTTGAGTGGGTTCAGACCAACCATCTACAAAAGAGGCGCAGCAATAGCATCACCACCAAAGACTCCAACCTAATAGCCCAACAACAATACCAAGACCCTTATCAAAACCCTAACCCTAACTCTATCCCTAGAGTACTTGAATCAAACCCTTCTTGTAATTTCACTCAGAGACCATGTATGGCGCCTCCACCACATGCAGCCGCCTATGATCCGGCGGCGGGGGGACTACTTGTCCCCATTCCGCCTCCAGCTTCTCCTCCGCCGGCGGCTTATCCTTCCATGATGGGGTATATGACGGCTGACCCTTTTGGGAATGGGCCAAGCTCATACCAACCATCTCCGGAGTATCATCATCACATGATTGACTCCGGTCAGCCATCATGGCAGTCGTCTCCGTTTGGTATGGTGGGAACGGCCCCTTACGGGTCCTTCCCGGATAATAACATTCACCTAGCCCCTCCCCAACACCATCCCCAGGCTTTTGCCGGGTACAGCAGTCAGTACCAGCCTTATCAATATTTCCCGGGGAATGGTGAGCGTCAATTGATGAGGTTAGGGCCTTCAGCTACCAAAGAAGCAAGGAAGAAGCGGATGGCGAGGCAGCGAAGGCTTGTGTCTCACCATAGGCACCACGGCCATCAACAGAATTCTCAGCAACTTAATAATGAAATGCCAGATCATAACTATCTTCAGCAGACAAGGTTTGTTGGGAACACTACTGATCTTAATTGCACTGGTGCTGTGCCGCTGCAGCCAAATCCGGGCAACTGGTTTTACTGGCCCACCGCCACAGCAGCCCTGTCCTCTTCTGCCGTGGCCATGATGCCTAGCATTATGCCGGAAGCCGCACCACTTCCTCCAGTGCAGCAAATGGATAGGCCGGCTAGTAATCAAGCACAGAATTACAATCAGGGCCGTAGTGCTGCGCAGGAAAGGCAAGAAAGACAGGAGAGGCGCCAGGGATGGAAATCTGAGAAGAATCTTAAGTTTCTCCTTCAGAAGGTATTGAAGCAGAGTGATGTGGGTAGTCTTGGAAGGATTGTGTTGCCAAAAAAAGAAGCAGAAACTCATCTTCCTGAATTGGATGCAAGAGACGGAATTTCCATTGCAATGGAAGACATTGGGACTTCTCGTGTGTGGAACATGCGCTATAGGTACTGGCCCAACAACAAAAGCAGGATGTATCTCCTTGAAAACACAGGAGATTTTGTGAGAGCCAATGGACTCCAAGAAGGAGACTTCATAGTCATCTATTCCGATGTGAAATGCAACAAATATGTAAGCATCAAAGAACTCACATCCTCTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000988 GO:0000989 GO:0001076 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009657 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010154 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031930 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0048316 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0071840 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

Protein Analysis

739

Amino Acids

82.74

Weight (kDa)

5.78

Isoelectric Point (pI)

63.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	635 - 726	1.3e-16	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24650
fragaria_vesca	FvH4_2g19630 FvH4_2g19630
malus_domestica	MD05G1181100.v1.1 MD10G1169900.v1.1
prunus_persica	Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0285371
rosa_laevigata	RLG00000012648
rosa_multiflora	Rmu_co8422167.1_g000001 Rmu_co8482611.1_g000001 Rmu_sc0006662.1_g000002 Rmu_sc0012535.1_g000011
rosa_roxburghii	Rroxscaffold_7G00183310
rosa_rugosa	Rorug06G0173900
rosa_samantha	Rh6AG284600 Rh6BG285800 Rh6CG286900 Rh6DG279900
rosa_wichuraiana	Rw6G024500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2150
Acc16I	TGCGCA	2 cut(s)	408, 1833
AccB1I	GGYRCC	3 cut(s)	1087, 1533, 1860
AccI	GTMKAC	1 cut(s)	836
AccII	CGCG	2 cut(s)	290, 320
AccIII	TCCGGA	2 cut(s)	742, 1246
AclWI	GGATC	6 cut(s)	462, 516, 726, 734, 747, 1109
AcoI	YGGCCR	3 cut(s)	753, 1540, 1722
AcsI	RAATTY	2 cut(s)	1552, 2004
AcuI	CTGAAG	3 cut(s)	1452, 1580, 1886
AcvI	CACGTG	1 cut(s)	249
AcyI	GRCGYC	2 cut(s)	1088, 1861
AfaI	GTAC	5 cut(s)	377, 1041, 1397, 1409, 2063
AflII	CTTAAG	1 cut(s)	1889
AgsI	TTSAA	7 cut(s)	20, 26, 518, 584, 1046, 1915, 2099
AhdI	GACNNNNNGTC	1 cut(s)	1136
AjnI	CCWGG	3 cut(s)	854, 1380, 1863
AluBI	AGCT	3 cut(s)	1157, 1230, 1472
AluI	AGCT	3 cut(s)	1157, 1230, 1472
Alw21I	GWGCWC	1 cut(s)	254
Alw26I	GTCTC	8 cut(s)	433, 785, 802, 1069, 1302, 1527, 1992, 2136
AlwI	GGATC	6 cut(s)	462, 516, 726, 734, 747, 1109
Ama87I	CYCGRG	1 cut(s)	1429
Aor13HI	TCCGGA	2 cut(s)	742, 1246
ApoI	RAATTY	2 cut(s)	1552, 2004
AspLEI	GCGC	9 cut(s)	232, 409, 851, 861, 945, 1090, 1834, 1863, 2055
AsuC2I	CCSGG	5 cut(s)	1340, 1393, 1430, 1431, 1668
AsuHPI	GGTGA	5 cut(s)	32, 949, 1346, 1451, 1517
AvaI	CYCGRG	1 cut(s)	1429
AvaII	GGWCC	3 cut(s)	88, 780, 1332
BaeI	ACNNNNGTAYC	2 cut(s)	1387, 1420
BalI	TGGCCA	2 cut(s)	755, 1724
BamHI	GGATCC	1 cut(s)	739
BanI	GGYRCC	3 cut(s)	1087, 1533, 1860
BanII	GRGCYC	1 cut(s)	327
BauI	CACGAG	1 cut(s)	2037
BbrPI	CACGTG	1 cut(s)	249
BbsI	GAAGAC	2 cut(s)	813, 2028
Bbv12I	GWGCWC	1 cut(s)	254
BbvCI	CCTCAGC	1 cut(s)	776
BceAI	ACGGC	7 cut(s)	287, 433, 1218, 1335, 1555, 1703, 1806
BciT130I	CCWGG	3 cut(s)	856, 1382, 1865
BciVI	GTATCC	1 cut(s)	67
BclI	TGATCA	1 cut(s)	391
BcnI	CCSGG	5 cut(s)	1340, 1393, 1430, 1431, 1668
BcoDI	GTCTC	8 cut(s)	433, 785, 802, 1069, 1302, 1527, 1992, 2136
BfaI	CTAG	4 cut(s)	1035, 1358, 1734, 1791
BfmI	CTRYAG	2 cut(s)	1655, 2056
BfoI	RGCGCY	3 cut(s)	862, 1091, 1864
BfrI	CTTAAG	1 cut(s)	1889
BfuI	GTATCC	1 cut(s)	67
BglI	GCCNNNNNGGC	2 cut(s)	299, 1288
BglII	AGATCT	3 cut(s)	52, 67, 438
BmcAI	AGTACT	2 cut(s)	377, 1041
Bme1390I	CCNGG	8 cut(s)	856, 1340, 1382, 1393, 1430, 1431, 1668, 1865
Bme18I	GGWCC	3 cut(s)	88, 780, 1332
BmeRI	GACNNNNNGTC	1 cut(s)	1136
BmeT110I	CYCGRG	1 cut(s)	1429
BmiI	GGNNCC	8 cut(s)	90, 324, 741, 1089, 1323, 1333, 1535, 1862
BmrFI	CCNGG	8 cut(s)	856, 1340, 1382, 1393, 1430, 1431, 1668, 1865
BmsI	GCATC	5 cut(s)	394, 963, 1719, 1981, 2199
BoxI	GACNNNNGTC	1 cut(s)	1275
BpiI	GAAGAC	2 cut(s)	813, 2028
BplI	GAGNNNNNCTC	2 cut(s)	782, 814
BpmI	CTGGAG	2 cut(s)	1137, 1749
Bpu10I	CCTNAGC	1 cut(s)	776
BpuEI	CTTGAG	3 cut(s)	293, 832, 929
BpuMI	CCSGG	5 cut(s)	1340, 1393, 1430, 1431, 1668
BsaAI	YACGTR	1 cut(s)	249
BsaBI	GATNNNNATC	2 cut(s)	437, 1873
BsaHI	GRCGYC	2 cut(s)	1088, 1861
BsaI	GGTCTC	2 cut(s)	802, 1069
BsaWI	WCCGGW	4 cut(s)	31, 742, 1246, 1274
BsaXI	ACNNNNNCTCC	2 cut(s)	2100, 2130
Bse118I	RCCGGY	3 cut(s)	232, 1168, 1786
Bse1I	ACTGG	6 cut(s)	373, 1645, 1679, 1688, 1766, 2069
Bse3DI	GCAATG	2 cut(s)	2010, 2022
Bse8I	GATNNNNATC	2 cut(s)	437, 1873
BseAI	TCCGGA	2 cut(s)	742, 1246
BseBI	CCWGG	3 cut(s)	856, 1382, 1865
BseJI	GATNNNNATC	2 cut(s)	437, 1873
BseMI	GCAATG	2 cut(s)	2010, 2022
BseMII	CTCAG	6 cut(s)	458, 472, 767, 1085, 1571, 1869
BseNI	ACTGG	6 cut(s)	373, 1645, 1679, 1688, 1766, 2069
BseRI	GAGGAG	8 cut(s)	165, 193, 196, 199, 244, 274, 716, 1152
BsgI	GTGCAG	1 cut(s)	1790
Bsh1236I	CGCG	2 cut(s)	290, 320
Bsh1285I	CGRYCG	1 cut(s)	843
BshNI	GGYRCC	3 cut(s)	1087, 1533, 1860
BsiEI	CGRYCG	1 cut(s)	843
BsiHKAI	GWGCWC	1 cut(s)	254
BsiHKCI	CYCGRG	1 cut(s)	1429
BslFI	GGGAC	4 cut(s)	505, 1124, 1143, 2044
BsmAI	GTCTC	8 cut(s)	433, 785, 802, 1069, 1302, 1527, 1992, 2136
BsmBI	CGTCTC	4 cut(s)	433, 785, 1302, 1992
BsmFI	GGGAC	4 cut(s)	505, 1124, 1143, 2044
Bso31I	GGTCTC	2 cut(s)	802, 1069
BsoBI	CYCGRG	1 cut(s)	1429
Bsp1286I	GDGCHC	2 cut(s)	254, 327
Bsp13I	TCCGGA	2 cut(s)	742, 1246
Bsp19I	CCATGG	2 cut(s)	612, 756
BspCNI	CTCAG	6 cut(s)	457, 471, 768, 1084, 1570, 1870
BspEI	TCCGGA	2 cut(s)	742, 1246
BspFNI	CGCG	2 cut(s)	290, 320
BspHI	TCATGA	1 cut(s)	637
BspLI	GGNNCC	8 cut(s)	90, 324, 741, 1089, 1323, 1333, 1535, 1862
BspMAI	CTGCAG	1 cut(s)	1659
BspPI	GGATC	6 cut(s)	462, 516, 726, 734, 747, 1109
BspT107I	GGYRCC	3 cut(s)	1087, 1533, 1860
BspTI	CTTAAG	1 cut(s)	1889
BspTNI	GGTCTC	2 cut(s)	802, 1069
BsrDI	GCAATG	2 cut(s)	2010, 2022
BsrFI	RCCGGY	3 cut(s)	232, 1168, 1786
BsrI	ACTGG	6 cut(s)	373, 1645, 1679, 1688, 1766, 2069
BssAI	RCCGGY	3 cut(s)	232, 1168, 1786
BssNI	GRCGYC	2 cut(s)	1088, 1861
BssSI	CACGAG	1 cut(s)	2037
BssT1I	CCWWGG	2 cut(s)	612, 756
Bst2BI	CACGAG	1 cut(s)	2037
Bst2UI	CCWGG	3 cut(s)	856, 1382, 1865
Bst4CI	ACNGT	5 cut(s)	244, 362, 400, 427, 796
Bst6I	CTCTTC	2 cut(s)	217, 1717
BstACI	GRCGYC	2 cut(s)	1088, 1861
BstAFI	CTTAAG	1 cut(s)	1889
BstBAI	YACGTR	1 cut(s)	249
BstC8I	GCNNGC	5 cut(s)	11, 60, 411, 1170, 1788
BstDEI	CTNAG	6 cut(s)	444, 458, 776, 1071, 1557, 1878
BstDSI	CCRYGG	5 cut(s)	288, 612, 756, 1537, 1719
BstENI	CCTNNNNNAGG	1 cut(s)	1904
BstFNI	CGCG	2 cut(s)	290, 320
BstH2I	RGCGCY	3 cut(s)	862, 1091, 1864
BstHHI	GCGC	9 cut(s)	232, 409, 851, 861, 945, 1090, 1834, 1863, 2055
BstMAI	GTCTC	8 cut(s)	433, 785, 802, 1069, 1302, 1527, 1992, 2136
BstMCI	CGRYCG	1 cut(s)	843
BstMWI	GCNNNNNNNGC	8 cut(s)	299, 352, 951, 1288, 1513, 1657, 1700, 1840
BstNI	CCWGG	3 cut(s)	856, 1382, 1865
BstNSI	RCATGY	5 cut(s)	62, 199, 413, 1103, 2053
BstPAI	GACNNNNGTC	1 cut(s)	1275
BstSCI	CCNGG	8 cut(s)	854, 1338, 1380, 1391, 1428, 1429, 1666, 1863
BstSFI	CTRYAG	2 cut(s)	1655, 2056
BstUI	CGCG	2 cut(s)	290, 320
BstV2I	GAAGAC	2 cut(s)	813, 2028
BstX2I	RGATCY	6 cut(s)	52, 67, 438, 454, 508, 739
BstXI	CCANNNNNNTGG	2 cut(s)	862, 2017
BstYI	RGATCY	6 cut(s)	52, 67, 438, 454, 508, 739
BsuI	GTATCC	1 cut(s)	67
BtgI	CCRYGG	5 cut(s)	288, 612, 756, 1537, 1719
BtsIMutI	CAGTG	3 cut(s)	466, 1638, 1773
Cac8I	GCNNGC	5 cut(s)	11, 60, 411, 1170, 1788
CciI	TCATGA	1 cut(s)	637
CfoI	GCGC	9 cut(s)	232, 409, 851, 861, 945, 1090, 1834, 1863, 2055
Cfr10I	RCCGGY	3 cut(s)	232, 1168, 1786
Cfr42I	CCGCGG	1 cut(s)	291
Cfr9I	CCCGGG	1 cut(s)	1429
CseI	GACGC	2 cut(s)	326, 1433
Csp6I	GTAC	5 cut(s)	376, 1040, 1396, 1408, 2062
CviQI	GTAC	5 cut(s)	376, 1040, 1396, 1408, 2062
DdeI	CTNAG	6 cut(s)	444, 458, 776, 1071, 1557, 1878
DinI	GGCGCC	2 cut(s)	1089, 1862
DrdI	GACNNNNNNGTC	1 cut(s)	2150
DriI	GACNNNNNGTC	1 cut(s)	1136
DseDI	GACNNNNNNGTC	1 cut(s)	2150
EaeI	YGGCCR	3 cut(s)	753, 1540, 1722
Eam1104I	CTCTTC	2 cut(s)	217, 1717
Eam1105I	GACNNNNNGTC	1 cut(s)	1136
EarI	CTCTTC	2 cut(s)	217, 1717
EciI	GGCGGA	5 cut(s)	480, 790, 882, 1137, 1155
Eco130I	CCWWGG	2 cut(s)	612, 756
Eco24I	GRGCYC	1 cut(s)	327
Eco31I	GGTCTC	2 cut(s)	802, 1069
Eco47I	GGWCC	3 cut(s)	88, 780, 1332
Eco57I	CTGAAG	3 cut(s)	1452, 1580, 1886
Eco72I	CACGTG	1 cut(s)	249
Eco88I	CYCGRG	1 cut(s)	1429
EcoNI	CCTNNNNNAGG	1 cut(s)	1904
EcoO109I	RGGNCCY	2 cut(s)	1332, 1463
EcoRI	GAATTC	1 cut(s)	1552
EcoRII	CCWGG	3 cut(s)	854, 1380, 1863
EcoT14I	CCWWGG	2 cut(s)	612, 756
EcoT22I	ATGCAT	2 cut(s)	197, 415
EcoT38I	GRGCYC	1 cut(s)	327
EgeI	GGCGCC	2 cut(s)	1089, 1862
EheI	GGCGCC	2 cut(s)	1089, 1862
ErhI	CCWWGG	2 cut(s)	612, 756
Esp3I	CGTCTC	4 cut(s)	433, 785, 1302, 1992
FaqI	GGGAC	4 cut(s)	505, 1124, 1143, 2044
FauI	CCCGC	1 cut(s)	1117
FbaI	TGATCA	1 cut(s)	391
FblI	GTMKAC	1 cut(s)	836
FriOI	GRGCYC	1 cut(s)	327
FspAI	RTGCGCAY	1 cut(s)	408
FspBI	CTAG	4 cut(s)	1035, 1358, 1734, 1791
FspI	TGCGCA	2 cut(s)	408, 1833
GlaI	GCGC	9 cut(s)	231, 408, 850, 860, 944, 1089, 1833, 1862, 2054
GsuI	CTGGAG	2 cut(s)	1137, 1749
HaeII	RGCGCY	3 cut(s)	862, 1091, 1864
HgaI	GACGC	2 cut(s)	326, 1433
HhaI	GCGC	9 cut(s)	232, 409, 851, 861, 945, 1090, 1834, 1863, 2055
Hin1I	GRCGYC	2 cut(s)	1088, 1861
Hin6I	GCGC	9 cut(s)	230, 407, 849, 859, 943, 1088, 1832, 1861, 2053
HinP1I	GCGC	9 cut(s)	230, 407, 849, 859, 943, 1088, 1832, 1861, 2053
HincII	GTYRAC	1 cut(s)	837
HindII	GTYRAC	1 cut(s)	837
HinfI	GANTC	6 cut(s)	518, 968, 1046, 1271, 1885, 2130
HphI	GGTGA	5 cut(s)	32, 949, 1346, 1451, 1517
Hpy166II	GTNNAC	2 cut(s)	88, 837
Hpy188I	TCNGA	8 cut(s)	316, 396, 723, 921, 1074, 1879, 1905, 2164
Hpy8I	GTNNAC	2 cut(s)	88, 837
Hpy99I	CGWCG	1 cut(s)	841
HpyCH4III	ACNGT	5 cut(s)	244, 362, 400, 427, 796
HpyCH4IV	ACGT	1 cut(s)	248
HpyF10VI	GCNNNNNNNGC	8 cut(s)	299, 352, 951, 1288, 1513, 1657, 1700, 1840
HpyF3I	CTNAG	6 cut(s)	444, 458, 776, 1071, 1557, 1878
HpySE526I	ACGT	1 cut(s)	248
Hsp92I	GRCGYC	2 cut(s)	1088, 1861
HspAI	GCGC	9 cut(s)	230, 407, 849, 859, 943, 1088, 1832, 1861, 2053
KasI	GGCGCC	2 cut(s)	1087, 1860
Kpn2I	TCCGGA	2 cut(s)	742, 1246
KroI	GCCGGC	2 cut(s)	1168, 1786
KroNI	GCCGGC	2 cut(s)	1170, 1788
Ksp22I	TGATCA	1 cut(s)	391
KspI	CCGCGG	1 cut(s)	291
LmnI	GCTCC	3 cut(s)	257, 322, 574
LweI	GCATC	5 cut(s)	394, 963, 1719, 1981, 2199
MaeI	CTAG	4 cut(s)	1035, 1358, 1734, 1791
MaeII	ACGT	1 cut(s)	248
MaeIII	GTNAC	3 cut(s)	244, 362, 500
MfeI	CAATTG	1 cut(s)	1448
MflI	RGATCY	6 cut(s)	52, 67, 438, 454, 508, 739
MhlI	GDGCHC	2 cut(s)	254, 327
MlsI	TGGCCA	2 cut(s)	755, 1724
MluCI	AATT	9 cut(s)	623, 642, 1063, 1448, 1552, 1633, 1807, 1985, 2004
MluNI	TGGCCA	2 cut(s)	755, 1724
Mly113I	GGCGCC	2 cut(s)	1088, 1861
MlyI	GAGTC	3 cut(s)	962, 1265, 2124
MmeI	TCCRAC	6 cut(s)	294, 432, 546, 670, 807, 996
Mox20I	TGGCCA	2 cut(s)	755, 1724
Mph1103I	ATGCAT	2 cut(s)	197, 415
MreI	CGCCGGCG	1 cut(s)	1168
MroI	TCCGGA	2 cut(s)	742, 1246
MroNI	GCCGGC	2 cut(s)	1168, 1786
MscI	TGGCCA	2 cut(s)	755, 1724
MseI	TTAA	5 cut(s)	897, 1566, 1632, 1890, 2215
MslI	CAYNNNNRTG	2 cut(s)	755, 2015
Msp20I	TGGCCA	2 cut(s)	755, 1724
MspA1I	CMGCKG	2 cut(s)	290, 1654
MspCI	CTTAAG	1 cut(s)	1889
MspR9I	CCNGG	8 cut(s)	856, 1340, 1382, 1393, 1430, 1431, 1668, 1865
MunI	CAATTG	1 cut(s)	1448
MvaI	CCWGG	3 cut(s)	856, 1382, 1865
MvnI	CGCG	2 cut(s)	290, 320
MwoI	GCNNNNNNNGC	8 cut(s)	299, 352, 951, 1288, 1513, 1657, 1700, 1840
NaeI	GCCGGC	2 cut(s)	1170, 1788
NarI	GGCGCC	2 cut(s)	1088, 1861
NciI	CCSGG	5 cut(s)	1340, 1393, 1430, 1431, 1668
NcoI	CCATGG	2 cut(s)	612, 756
NgoMIV	GCCGGC	2 cut(s)	1168, 1786
NlaIV	GGNNCC	8 cut(s)	90, 324, 741, 1089, 1323, 1333, 1535, 1862
NmuCI	GTSAC	1 cut(s)	244
NsbI	TGCGCA	2 cut(s)	408, 1833
NsiI	ATGCAT	2 cut(s)	197, 415
NspI	RCATGY	5 cut(s)	62, 199, 413, 1103, 2053
PaeI	GCATGC	2 cut(s)	62, 413
PagI	TCATGA	1 cut(s)	637
PcsI	WCGNNNNNNNCGW	2 cut(s)	275, 324
PdiI	GCCGGC	2 cut(s)	1170, 1788
PfeI	GAWTC	3 cut(s)	518, 1046, 1885
PfoI	TCCNGGA	1 cut(s)	1338
Ple19I	CGATCG	1 cut(s)	843
PleI	GAGTC	3 cut(s)	962, 1265, 2124
PluTI	GGCGCC	2 cut(s)	1091, 1864
PmaCI	CACGTG	1 cut(s)	249
PmlI	CACGTG	1 cut(s)	249
PpsI	GAGTC	3 cut(s)	962, 1265, 2124
Ppu21I	YACGTR	1 cut(s)	249
PpuMI	RGGWCCY	1 cut(s)	1332
PshAI	GACNNNNGTC	1 cut(s)	1275
Psp5II	RGGWCCY	1 cut(s)	1332
Psp6I	CCWGG	3 cut(s)	854, 1380, 1863
PspCI	CACGTG	1 cut(s)	249
PspGI	CCWGG	3 cut(s)	854, 1380, 1863
PspN4I	GGNNCC	8 cut(s)	90, 324, 741, 1089, 1323, 1333, 1535, 1862
PspPPI	RGGWCCY	1 cut(s)	1332
PstI	CTGCAG	1 cut(s)	1659
PsuI	RGATCY	6 cut(s)	52, 67, 438, 454, 508, 739
PvuI	CGATCG	1 cut(s)	843
RsaI	GTAC	5 cut(s)	377, 1041, 1397, 1409, 2063
RsaNI	GTAC	5 cut(s)	376, 1040, 1396, 1408, 2062
RseI	CAYNNNNRTG	2 cut(s)	755, 2015
SacII	CCGCGG	1 cut(s)	291
SalI	GTCGAC	1 cut(s)	835
SaqAI	TTAA	5 cut(s)	897, 1566, 1632, 1890, 2215
ScaI	AGTACT	2 cut(s)	377, 1041
SchI	GAGTC	3 cut(s)	962, 1265, 2124
ScrFI	CCNGG	8 cut(s)	856, 1340, 1382, 1393, 1430, 1431, 1668, 1865
SduI	GDGCHC	2 cut(s)	254, 327
SfaNI	GCATC	5 cut(s)	394, 963, 1719, 1981, 2199
SfcI	CTRYAG	2 cut(s)	1655, 2056
SfiI	GGCCNNNNNGGCC	1 cut(s)	299
SfoI	GGCGCC	2 cut(s)	1089, 1862
Sfr303I	CCGCGG	1 cut(s)	291
SgrAI	CRCCGGYG	1 cut(s)	1168
SgrBI	CCGCGG	1 cut(s)	291
SinI	GGWCC	3 cut(s)	88, 780, 1332
SmaI	CCCGGG	1 cut(s)	1431
SmiMI	CAYNNNNRTG	2 cut(s)	755, 2015
SmlI	CTYRAG	4 cut(s)	308, 811, 908, 1889
SmoI	CTYRAG	4 cut(s)	308, 811, 908, 1889
SphI	GCATGC	2 cut(s)	62, 413
Sse9I	AATT	9 cut(s)	623, 642, 1063, 1448, 1552, 1633, 1807, 1985, 2004
SspDI	GGCGCC	2 cut(s)	1087, 1860
SspI	AATATT	1 cut(s)	1424
SspMI	CTAG	4 cut(s)	1035, 1358, 1734, 1791
StyD4I	CCNGG	8 cut(s)	854, 1338, 1380, 1391, 1428, 1429, 1666, 1863
StyI	CCWWGG	2 cut(s)	612, 756
TaaI	ACNGT	5 cut(s)	244, 362, 400, 427, 796
TaiI	ACGT	1 cut(s)	251
TaqI	TCGA	4 cut(s)	132, 431, 836, 843
TasI	AATT	9 cut(s)	623, 642, 1063, 1448, 1552, 1633, 1807, 1985, 2004
TatI	WGTACW	2 cut(s)	375, 1039
TauI	GCSGC	7 cut(s)	293, 854, 1109, 1124, 1175, 1654, 1754
TfiI	GAWTC	3 cut(s)	518, 1046, 1885
Tru1I	TTAA	5 cut(s)	897, 1566, 1632, 1890, 2215
Tru9I	TTAA	5 cut(s)	897, 1566, 1632, 1890, 2215
TscAI	CASTG	3 cut(s)	466, 1645, 1773
TseFI	GTSAC	1 cut(s)	244
Tsp45I	GTSAC	1 cut(s)	244
TspDTI	ATGAA	8 cut(s)	17, 26, 204, 559, 654, 899, 1587, 2137
TspGWI	ACGGA	2 cut(s)	1290, 2016
TspMI	CCCGGG	1 cut(s)	1429
TspRI	CASTG	3 cut(s)	466, 1645, 1773
Vha464I	CTTAAG	1 cut(s)	1889
VpaK11BI	GGWCC	3 cut(s)	88, 780, 1332
XagI	CCTNNNNNAGG	1 cut(s)	1904
XapI	RAATTY	2 cut(s)	1552, 2004
XceI	RCATGY	5 cut(s)	62, 199, 413, 1103, 2053
XcmI	CCANNNNNNNNNTGG	2 cut(s)	430, 763
XmaI	CCCGGG	1 cut(s)	1429
XmiI	GTMKAC	1 cut(s)	836
XspI	CTAG	4 cut(s)	1035, 1358, 1734, 1791
ZrmI	AGTACT	2 cut(s)	377, 1041
Zsp2I	ATGCAT	2 cut(s)	197, 415

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.