Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0008051

Physical Location & Seq

Genomic Coordinates Reverse (-)

48046625 .. 48050640

Gene Structure 4016 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG284600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGGATGGAGTGCAAGTTCAAGTCCACGGCAACCACCACCAAGATCTGCATGGAGAGGATCACCACAGCCAGCATCTCGTCGGCAAAGAAGTGATGCGGAACGATTTCGGAGAAGAAGGTGACGCCGCAGATCTATGGCTTGATAATGAGCAAGATTCTCTTCTCGCTGACGTCAACGACGGAACTGCTTCCATCTTCTGCAATGACTTCCCTCCTCTGCCTGACTTCCCTTGCATGTCATCCTCTTCATCTTCGTCTTCGACTCGGGTGCCGGTGAAGACCGTGTCGTCGTCTTCCTCGGCATCTTCGTCTTCTTCCGCGGCTTCCTGGGCGGTTCTCAAATCAGATGCGGAGGATAATAACAATTATCATTCTCAAGATTATCAGCAGCAACAAGACAACAACAACAATTACTACTCTCGTAACGATTCGGCTGATGCACATCCGGCGGGGGCGTTGTCCTCCACCGCCTCGATGGAGATCTCTCAGCCGTCAGATCTCGGAATGGAGTGCATGGACATGATGGAGACTTTCGGGTACATAGATCTGTTCGAAGGCAACGAGTTGTTCGACCCGTCTTCCATTTTCCAAAACGAGAATCCAATGATGGACCAATTCCAAGCGCAGGAGCAACCTCCTCAGGAACAGCTGCATGCAGACAATCAAACCTCACACCCACAAGAGAACATGACCATGGGAGATCAGAGCAACAAGGTTCCGGAGGACGACATGGCGTCTGTGTTCTTGGAGTGGCTGAGGTCAAACCGAGAGACGGTTTCAGCCGAGGATTTGAGGAGCGTGAAGATCAAGAAGTCAACAATCGAGTCCGCCGCTAGGCGTTTGGGTGGAGGCAAAGAGGCGATGAAGCAGTTACTCAAACTGGTGCTTGAGTGGGTTCAAACTAACCATCTCCAAAAGAGGCGCGGTACTAAAGACTCGGGGATACAACAGTATGCAGTAGACCCATTTCAAAACGCCATCCCTAACCCTAACCCTAGTCTTAATCCTACACAAAATCCTCCCATAACATCGCCGTGGATGGCGTCTCCCCAGTATGATGCAGCGGCGCCCATTTTAGTCCCGACTCCATCTCAGGTGGGTTATCCGTCAACTCCGATGATGGGGTTTATGGGTCAGGACCCTTTTGGAAACGGGCCGGGTTACCAGCAACCAATATCAGATCAATACCAGCATCAAATGCTAGAGACTGCACCAACCTGGCCGCCTTCATCTCCATTTATGGGCAACAATTATGGATCTTTCCCGGATAGTAATATCCAACTAGCACCTCCTCAGCATCAGCAACCGCTTTCCGGTTACGGAGGGCAGTATGGTCAGTATCAATATTTTCAAGGGCAATCAGGTGAGCCGCAGCTGGTGAGGTTAGGGTCTTCGGCAACTAAAGAGGCTAGGAAGAAGAGGATGCAAAGGCAGAGAAGGACTTTGTCACACCACCATGGAAGGCATCATGGACACCAACAGAATCAGCATCCTAATCAAATGCCGGATCAAAGGCTAGTTGGGAACGCCGATCACAATTGCACTACTGCCGCAATGGGCAATCCGGCTGCTTCTAACTGGTTTTATTGGCCCACCACGGCGGCTGGTGGTCCTGCTCCTGCAGCCTCACCGGCAATGATGCAAACGATGGCTCCCGAGGCAGCACCATTGGTGCTTCCAGTTGATCGTCCGGCCAGTCAAGGGCAGAATTATAATCCGGGCCGGATTAATACACAGGAAAGGCAACAGGGATGGAGACCTGAGAATAAGAATTTGAGGTTCCTTCTTCAGAAAGTGTTGAAGCAAAGTGATGTGGGCAATCTTGGAAGAATTGTTTTGCCAAAAAAAGAAGCCGAAACCCATCTTCCTGAGTTAGAGGCAAGGGACGGAATTTCAATTGCGATGGAAGACATCGGGACTTCTCGTGTATGGAACATGCGCTATAGGTACTGGCCCAACAACAAAAGCAGGATGTATCTCCTTGAAAACACAGGAGATTTTGTGAGGGCAAATGGACTCCAAGAAGGGGACTTCATAGTCATCTATTCAGACGTCAAGTGTAACAAATATGTATGGACATTTCTCTATTCAAATAATCCCTTATTATTATTTTCTTTCAAGTTTGATTATTCAGTATTAGTTACTTCTGATGCACAGATGATAAGAGGAGTGAAGGTACGGCAAGCGGGGACTAAATCAGAGACCAAAAGGCCAGGAAAGTCGCAAAGGAACCAACATGCAAGCACTCCATCTGGCAACAATGGTTCGTCATCTAAGAAACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000988 GO:0000989 GO:0001076 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009657 GO:0009719 GO:0009725 GO:0009733 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010154 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031930 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045893 GO:0045935 GO:0048316 GO:0048518 GO:0048522 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0071840 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

Protein Analysis

761

Amino Acids

84.71

Weight (kDa)

5.78

Isoelectric Point (pI)

50.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	597 - 691	1.4e-16	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24650
fragaria_vesca	FvH4_2g19630 FvH4_2g19630
malus_domestica	MD05G1181100.v1.1 MD10G1169900.v1.1
prunus_persica	Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1 Prupe.8G207700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0285371
rosa_laevigata	RLG00000012648
rosa_multiflora	Rmu_co8422167.1_g000001 Rmu_co8482611.1_g000001 Rmu_sc0006662.1_g000002 Rmu_sc0012535.1_g000011
rosa_roxburghii	Rroxscaffold_7G00183310
rosa_rugosa	Rorug06G0173900
rosa_samantha	Rh6AG284600 Rh6BG285800 Rh6CG286900 Rh6DG279900
rosa_wichuraiana	Rw6G024500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1713
AasI	GACNNNNNNGTC	2 cut(s)	286, 2036
AatII	GACGTC	2 cut(s)	174, 2055
AccB1I	GGYRCC	2 cut(s)	268, 1066
AccI	GTMKAC	1 cut(s)	960
AccII	CGCG	2 cut(s)	320, 924
AccIII	TCCGGA	1 cut(s)	718
AclWI	GGATC	3 cut(s)	66, 1264, 1515
AcoI	YGGCCR	2 cut(s)	1220, 1692
AcsI	RAATTY	2 cut(s)	1771, 1890
AcuI	CTGAAG	1 cut(s)	1772
AcyI	GRCGYC	6 cut(s)	123, 171, 734, 1043, 1067, 2052
AfaI	GTAC	4 cut(s)	539, 928, 1949, 2178
AfiI	CCNNNNNNNGG	8 cut(s)	625, 772, 834, 1121, 1241, 1313, 1701, 2026
AgsI	TTSAA	9 cut(s)	20, 899, 971, 1352, 1801, 1896, 1985, 2091, 2119
AhdI	GACNNNNNGTC	1 cut(s)	733
AjnI	CCWGG	3 cut(s)	326, 1217, 2212
AloI	GAACNNNNNNTCC	1 cut(s)	32
AluBI	AGCT	2 cut(s)	649, 1375
AluI	AGCT	2 cut(s)	649, 1375
Alw26I	GTCTC	6 cut(s)	521, 764, 1050, 1199, 1750, 2195
AlwI	GGATC	3 cut(s)	66, 1264, 1515
Ama87I	CYCGRG	3 cut(s)	264, 937, 1655
Aor13HI	TCCGGA	1 cut(s)	718
AoxI	GGCC	7 cut(s)	1154, 1220, 1589, 1692, 1720, 1952, 2210
ApeKI	GCWGC	7 cut(s)	388, 649, 1061, 1372, 1568, 1622, 1661
ApoI	RAATTY	2 cut(s)	1771, 1890
AseI	ATTAAT	1 cut(s)	1728
Asp700I	GAANNNNTTC	2 cut(s)	104, 187
AspLEI	GCGC	4 cut(s)	625, 924, 1069, 1941
AspS9I	GGNCC	7 cut(s)	610, 1138, 1154, 1590, 1610, 1720, 1953
AsuC2I	CCSGG	3 cut(s)	1158, 1265, 1719
AsuHPI	GGTGA	6 cut(s)	53, 131, 286, 1376, 1390, 1620
AsuII	TTCGAA	1 cut(s)	552
AvaI	CYCGRG	3 cut(s)	264, 937, 1655
AvaII	GGWCC	3 cut(s)	610, 1138, 1610
AxyI	CCTNAGG	1 cut(s)	639
BaeI	ACNNNNGTAYC	2 cut(s)	935, 968
BanI	GGYRCC	2 cut(s)	268, 1066
BauI	CACGAG	1 cut(s)	1923
BbsI	GAAGAC	7 cut(s)	249, 284, 285, 303, 570, 1383, 1914
BbvCI	CCTCAGC	2 cut(s)	755, 1293
BbvI	GCAGC	7 cut(s)	400, 636, 1073, 1384, 1555, 1634, 1673
BceAI	ACGGC	5 cut(s)	43, 475, 1018, 1614, 2195
BcgI	CGANNNNNNTGC	4 cut(s)	167, 201, 250, 284
BciT130I	CCWGG	3 cut(s)	328, 1219, 2214
BciVI	GTATCC	1 cut(s)	936
BcnI	CCSGG	3 cut(s)	1158, 1265, 1719
BcoDI	GTCTC	6 cut(s)	521, 764, 1050, 1199, 1750, 2195
BfaI	CTAG	6 cut(s)	834, 996, 1202, 1283, 1410, 1517
BfmI	CTRYAG	2 cut(s)	1620, 1942
BfoI	RGCGCY	1 cut(s)	1070
BfuI	GTATCC	1 cut(s)	936
BglI	GCCNNNNNGGC	1 cut(s)	1631
BglII	AGATCT	5 cut(s)	43, 130, 480, 496, 544
Bme1390I	CCNGG	6 cut(s)	328, 1158, 1219, 1265, 1719, 2214
Bme18I	GGWCC	3 cut(s)	610, 1138, 1610
BmeRI	GACNNNNNGTC	1 cut(s)	733
BmeT110I	CYCGRG	3 cut(s)	264, 937, 1655
BmgT120I	GGNCC	7 cut(s)	610, 1138, 1154, 1590, 1610, 1720, 1953
BmiI	GGNNCC	7 cut(s)	270, 717, 1068, 1140, 1653, 1781, 2231
BmrFI	CCNGG	6 cut(s)	328, 1158, 1219, 1265, 1719, 2214
BmrI	ACTGGG	1 cut(s)	1045
BmuI	ACTGGG	1 cut(s)	1045
BpiI	GAAGAC	7 cut(s)	249, 284, 285, 303, 570, 1383, 1914
Bpu10I	CCTNAGC	2 cut(s)	755, 1293
Bpu14I	TTCGAA	1 cut(s)	552
BpuEI	CTTGAG	2 cut(s)	360, 908
BpuMI	CCSGG	3 cut(s)	1158, 1265, 1719
BsaBI	GATNNNNATC	2 cut(s)	441, 479
BsaHI	GRCGYC	6 cut(s)	123, 171, 734, 1043, 1067, 2052
BsaI	GGTCTC	2 cut(s)	1750, 2195
BsaWI	WCCGGW	2 cut(s)	718, 1313
BsaXI	ACNNNNNCTCC	7 cut(s)	30, 1636, 1666, 1986, 2016, 2160, 2190
Bsc4I	CCNNNNNNNGG	8 cut(s)	625, 772, 834, 1121, 1241, 1313, 1701, 2026
Bse118I	RCCGGY	2 cut(s)	271, 1630
Bse1I	ACTGG	6 cut(s)	885, 1051, 1583, 1679, 1695, 1955
Bse21I	CCTNAGG	1 cut(s)	639
Bse3DI	GCAATG	3 cut(s)	208, 1560, 1641
Bse8I	GATNNNNATC	2 cut(s)	441, 479
BseAI	TCCGGA	1 cut(s)	718
BseBI	CCWGG	3 cut(s)	328, 1219, 2214
BseGI	GGATG	9 cut(s)	10, 239, 442, 978, 1044, 1428, 1489, 1757, 1977
BseJI	GATNNNNATC	2 cut(s)	441, 479
BseLI	CCNNNNNNNGG	8 cut(s)	625, 772, 834, 1121, 1241, 1313, 1701, 2026
BseMI	GCAATG	3 cut(s)	208, 1560, 1641
BseMII	CTCAG	7 cut(s)	500, 653, 746, 1106, 1307, 1752, 1860
BseNI	ACTGG	6 cut(s)	885, 1051, 1583, 1679, 1695, 1955
BseRI	GAGGAG	5 cut(s)	204, 627, 808, 1281, 2181
BseXI	GCAGC	7 cut(s)	400, 636, 1073, 1384, 1555, 1634, 1673
BsgI	GTGCAG	1 cut(s)	1194
Bsh1236I	CGCG	2 cut(s)	320, 924
BshFI	GGCC	7 cut(s)	1156, 1222, 1591, 1694, 1722, 1954, 2212
BshNI	GGYRCC	2 cut(s)	268, 1066
BsiHKCI	CYCGRG	3 cut(s)	264, 937, 1655
BslFI	GGGAC	5 cut(s)	1064, 1898, 1930, 2042, 2203
BslI	CCNNNNNNNGG	8 cut(s)	625, 772, 834, 1121, 1241, 1313, 1701, 2026
BsmAI	GTCTC	6 cut(s)	521, 764, 1050, 1199, 1750, 2195
BsmBI	CGTCTC	2 cut(s)	764, 1050
BsmFI	GGGAC	5 cut(s)	1064, 1898, 1930, 2042, 2203
BsnI	GGCC	7 cut(s)	1156, 1222, 1591, 1694, 1722, 1954, 2212
Bso31I	GGTCTC	2 cut(s)	1750, 2195
BsoBI	CYCGRG	3 cut(s)	264, 937, 1655
Bsp119I	TTCGAA	1 cut(s)	552
Bsp13I	TCCGGA	1 cut(s)	718
Bsp19I	CCATGG	2 cut(s)	693, 1456
BspANI	GGCC	7 cut(s)	1156, 1222, 1591, 1694, 1722, 1954, 2212
BspCNI	CTCAG	7 cut(s)	499, 652, 747, 1105, 1306, 1753, 1861
BspEI	TCCGGA	1 cut(s)	718
BspFNI	CGCG	2 cut(s)	320, 924
BspLI	GGNNCC	7 cut(s)	270, 717, 1068, 1140, 1653, 1781, 2231
BspMAI	CTGCAG	1 cut(s)	1624
BspPI	GGATC	3 cut(s)	66, 1264, 1515
BspT104I	TTCGAA	1 cut(s)	552
BspT107I	GGYRCC	2 cut(s)	268, 1066
BspTNI	GGTCTC	2 cut(s)	1750, 2195
BsrDI	GCAATG	3 cut(s)	208, 1560, 1641
BsrFI	RCCGGY	2 cut(s)	271, 1630
BsrI	ACTGG	6 cut(s)	885, 1051, 1583, 1679, 1695, 1955
BssAI	RCCGGY	2 cut(s)	271, 1630
BssNI	GRCGYC	6 cut(s)	123, 171, 734, 1043, 1067, 2052
BssSI	CACGAG	1 cut(s)	1923
BssT1I	CCWWGG	2 cut(s)	693, 1456
Bst2BI	CACGAG	1 cut(s)	1923
Bst2UI	CCWGG	3 cut(s)	328, 1219, 2214
Bst4CI	ACNGT	4 cut(s)	283, 775, 951, 2283
Bst6I	CTCTTC	3 cut(s)	165, 250, 1412
BstACI	GRCGYC	6 cut(s)	123, 171, 734, 1043, 1067, 2052
BstAPI	GCANNNNNTGC	1 cut(s)	1198
BstBI	TTCGAA	1 cut(s)	552
BstC8I	GCNNGC	4 cut(s)	71, 654, 2184, 2242
BstDEI	CTNAG	8 cut(s)	486, 639, 755, 1092, 1293, 1761, 1869, 2274
BstDSI	CCRYGG	6 cut(s)	25, 318, 693, 1034, 1456, 1596
BstEII	GGTNACC	1 cut(s)	1160
BstF5I	GGATG	9 cut(s)	10, 239, 442, 978, 1044, 1428, 1489, 1757, 1977
BstFNI	CGCG	2 cut(s)	320, 924
BstH2I	RGCGCY	1 cut(s)	1070
BstHHI	GCGC	4 cut(s)	625, 924, 1069, 1941
BstMAI	GTCTC	6 cut(s)	521, 764, 1050, 1199, 1750, 2195
BstMWI	GCNNNNNNNGC	6 cut(s)	329, 446, 1198, 1622, 1631, 1658
BstNI	CCWGG	3 cut(s)	328, 1219, 2214
BstNSI	RCATGY	4 cut(s)	238, 656, 1939, 2240
BstPI	GGTNACC	1 cut(s)	1160
BstSCI	CCNGG	6 cut(s)	326, 1156, 1217, 1263, 1717, 2212
BstSFI	CTRYAG	2 cut(s)	1620, 1942
BstUI	CGCG	2 cut(s)	320, 924
BstV1I	GCAGC	7 cut(s)	400, 636, 1073, 1384, 1555, 1634, 1673
BstV2I	GAAGAC	7 cut(s)	249, 284, 285, 303, 570, 1383, 1914
BstX2I	RGATCY	6 cut(s)	43, 130, 480, 496, 544, 1256
BstYI	RGATCY	6 cut(s)	43, 130, 480, 496, 544, 1256
Bsu36I	CCTNAGG	1 cut(s)	639
BsuI	GTATCC	1 cut(s)	936
BsuRI	GGCC	7 cut(s)	1156, 1222, 1591, 1694, 1722, 1954, 2212
BtgI	CCRYGG	6 cut(s)	25, 318, 693, 1034, 1456, 1596
BtgZI	GCGATG	3 cut(s)	875, 1014, 1916
BtsCI	GGATG	9 cut(s)	10, 239, 442, 978, 1044, 1428, 1489, 1757, 1977
Cac8I	GCNNGC	4 cut(s)	71, 654, 2184, 2242
CfoI	GCGC	4 cut(s)	625, 924, 1069, 1941
Cfr10I	RCCGGY	2 cut(s)	271, 1630
Cfr13I	GGNCC	7 cut(s)	610, 1138, 1154, 1590, 1610, 1720, 1953
Cfr42I	CCGCGG	1 cut(s)	321
CseI	GACGC	3 cut(s)	131, 723, 1032
Csp6I	GTAC	4 cut(s)	538, 927, 1948, 2177
CviQI	GTAC	4 cut(s)	538, 927, 1948, 2177
DdeI	CTNAG	8 cut(s)	486, 639, 755, 1092, 1293, 1761, 1869, 2274
DinI	GGCGCC	1 cut(s)	1068
DrdI	GACNNNNNNGTC	2 cut(s)	286, 2036
DriI	GACNNNNNGTC	1 cut(s)	733
DseDI	GACNNNNNNGTC	2 cut(s)	286, 2036
EaeI	YGGCCR	2 cut(s)	1220, 1692
Eam1104I	CTCTTC	3 cut(s)	165, 250, 1412
Eam1105I	GACNNNNNGTC	1 cut(s)	733
EarI	CTCTTC	3 cut(s)	165, 250, 1412
EciI	GGCGGA	1 cut(s)	817
Eco130I	CCWWGG	2 cut(s)	693, 1456
Eco31I	GGTCTC	2 cut(s)	1750, 2195
Eco47I	GGWCC	3 cut(s)	610, 1138, 1610
Eco57I	CTGAAG	1 cut(s)	1772
Eco81I	CCTNAGG	1 cut(s)	639
Eco88I	CYCGRG	3 cut(s)	264, 937, 1655
Eco91I	GGTNACC	1 cut(s)	1160
EcoO109I	RGGNCCY	1 cut(s)	1138
EcoO65I	GGTNACC	1 cut(s)	1160
EcoRII	CCWGG	3 cut(s)	326, 1217, 2212
EcoT14I	CCWWGG	2 cut(s)	693, 1456
EgeI	GGCGCC	1 cut(s)	1068
EheI	GGCGCC	1 cut(s)	1068
ErhI	CCWWGG	2 cut(s)	693, 1456
Esp3I	CGTCTC	2 cut(s)	764, 1050
FalI	AAGNNNNNCTT	2 cut(s)	144, 176
FaqI	GGGAC	5 cut(s)	1064, 1898, 1930, 2042, 2203
FauI	CCCGC	2 cut(s)	442, 2179
FblI	GTMKAC	1 cut(s)	960
FokI	GGATG	9 cut(s)	17, 226, 429, 965, 1051, 1435, 1476, 1764, 1984
FspBI	CTAG	6 cut(s)	834, 996, 1202, 1283, 1410, 1517
GlaI	GCGC	4 cut(s)	624, 923, 1068, 1940
HaeII	RGCGCY	1 cut(s)	1070
HaeIII	GGCC	7 cut(s)	1156, 1222, 1591, 1694, 1722, 1954, 2212
HgaI	GACGC	3 cut(s)	131, 723, 1032
HhaI	GCGC	4 cut(s)	625, 924, 1069, 1941
Hin1I	GRCGYC	6 cut(s)	123, 171, 734, 1043, 1067, 2052
Hin6I	GCGC	4 cut(s)	623, 922, 1067, 1939
HinP1I	GCGC	4 cut(s)	623, 922, 1067, 1939
HincII	GTYRAC	3 cut(s)	175, 816, 1110
HindII	GTYRAC	3 cut(s)	175, 816, 1110
HinfI	GANTC	9 cut(s)	155, 262, 428, 598, 824, 935, 1084, 1483, 2016
HphI	GGTGA	6 cut(s)	53, 131, 286, 1376, 1390, 1620
Hpy166II	GTNNAC	5 cut(s)	25, 175, 816, 961, 1110
Hpy188III	TCNNGA	9 cut(s)	377, 641, 719, 808, 1081, 1136, 1655, 1868, 1915
Hpy8I	GTNNAC	5 cut(s)	25, 175, 816, 961, 1110
Hpy99I	CGWCG	3 cut(s)	83, 182, 292
HpyAV	CCTTC	8 cut(s)	110, 548, 1236, 1431, 1455, 1793, 2018, 2167
HpyCH4III	ACNGT	4 cut(s)	283, 775, 951, 2283
HpyCH4IV	ACGT	2 cut(s)	171, 2052
HpyF10VI	GCNNNNNNNGC	6 cut(s)	329, 446, 1198, 1622, 1631, 1658
HpyF3I	CTNAG	8 cut(s)	486, 639, 755, 1092, 1293, 1761, 1869, 2274
HpySE526I	ACGT	2 cut(s)	171, 2052
Hsp92I	GRCGYC	6 cut(s)	123, 171, 734, 1043, 1067, 2052
HspAI	GCGC	4 cut(s)	623, 922, 1067, 1939
KasI	GGCGCC	1 cut(s)	1066
Kpn2I	TCCGGA	1 cut(s)	718
KspI	CCGCGG	1 cut(s)	321
LmnI	GCTCC	4 cut(s)	628, 795, 1621, 1657
Lsp1109I	GCAGC	7 cut(s)	400, 636, 1073, 1384, 1555, 1634, 1673
MaeI	CTAG	6 cut(s)	834, 996, 1202, 1283, 1410, 1517
MaeII	ACGT	2 cut(s)	171, 2052
MaeIII	GTNAC	8 cut(s)	119, 422, 870, 1160, 1316, 1446, 2060, 2140
MfeI	CAATTG	2 cut(s)	1537, 1896
MflI	RGATCY	6 cut(s)	43, 130, 480, 496, 544, 1256
Mly113I	GGCGCC	1 cut(s)	1067
MlyI	GAGTC	5 cut(s)	256, 833, 929, 1078, 2010
MmeI	TCCRAC	1 cut(s)	1303
MroI	TCCGGA	1 cut(s)	718
MroXI	GAANNNNTTC	2 cut(s)	104, 187
MseI	TTAA	2 cut(s)	1002, 1728
MslI	CAYNNNNRTG	4 cut(s)	518, 692, 1033, 1455
MspA1I	CMGCKG	4 cut(s)	320, 649, 1064, 1375
MspR9I	CCNGG	6 cut(s)	328, 1158, 1219, 1265, 1719, 2214
MunI	CAATTG	2 cut(s)	1537, 1896
MvaI	CCWGG	3 cut(s)	328, 1219, 2214
MvnI	CGCG	2 cut(s)	320, 924
MwoI	GCNNNNNNNGC	6 cut(s)	329, 446, 1198, 1622, 1631, 1658
NarI	GGCGCC	1 cut(s)	1067
NciI	CCSGG	3 cut(s)	1158, 1265, 1719
NcoI	CCATGG	2 cut(s)	693, 1456
NlaIV	GGNNCC	7 cut(s)	270, 717, 1068, 1140, 1653, 1781, 2231
NmeAIII	GCCGAG	2 cut(s)	278, 808
NmuCI	GTSAC	2 cut(s)	119, 1446
NspI	RCATGY	4 cut(s)	238, 656, 1939, 2240
NspV	TTCGAA	1 cut(s)	552
PaeI	GCATGC	1 cut(s)	656
PcsI	WCGNNNNNNNCGW	3 cut(s)	305, 558, 567
PdmI	GAANNNNTTC	2 cut(s)	104, 187
PfeI	GAWTC	4 cut(s)	155, 428, 598, 1483
PflFI	GACNNNGTC	2 cut(s)	283, 1444
PfoI	TCCNGGA	1 cut(s)	1263
PleI	GAGTC	5 cut(s)	256, 832, 929, 1078, 2010
PluTI	GGCGCC	1 cut(s)	1070
PpsI	GAGTC	5 cut(s)	256, 832, 929, 1078, 2010
PpuMI	RGGWCCY	1 cut(s)	1138
PshBI	ATTAAT	1 cut(s)	1728
PsiI	TTATAA	1 cut(s)	1713
Psp5II	RGGWCCY	1 cut(s)	1138
Psp6I	CCWGG	3 cut(s)	326, 1217, 2212
PspEI	GGTNACC	1 cut(s)	1160
PspGI	CCWGG	3 cut(s)	326, 1217, 2212
PspN4I	GGNNCC	7 cut(s)	270, 717, 1068, 1140, 1653, 1781, 2231
PspPI	GGNCC	7 cut(s)	610, 1138, 1154, 1590, 1610, 1720, 1953
PspPPI	RGGWCCY	1 cut(s)	1138
PstI	CTGCAG	1 cut(s)	1624
PsuI	RGATCY	6 cut(s)	43, 130, 480, 496, 544, 1256
PsyI	GACNNNGTC	2 cut(s)	283, 1444
PvuII	CAGCTG	2 cut(s)	649, 1375
RsaI	GTAC	4 cut(s)	539, 928, 1949, 2178
RsaNI	GTAC	4 cut(s)	538, 927, 1948, 2177
RseI	CAYNNNNRTG	4 cut(s)	518, 692, 1033, 1455
SacII	CCGCGG	1 cut(s)	321
SaqAI	TTAA	2 cut(s)	1002, 1728
Sau96I	GGNCC	7 cut(s)	610, 1138, 1154, 1590, 1610, 1720, 1953
SchI	GAGTC	5 cut(s)	256, 833, 929, 1078, 2010
ScrFI	CCNGG	6 cut(s)	328, 1158, 1219, 1265, 1719, 2214
SfcI	CTRYAG	2 cut(s)	1620, 1942
SfoI	GGCGCC	1 cut(s)	1068
Sfr303I	CCGCGG	1 cut(s)	321
SfuI	TTCGAA	1 cut(s)	552
SgrBI	CCGCGG	1 cut(s)	321
SinI	GGWCC	3 cut(s)	610, 1138, 1610
SmiMI	CAYNNNNRTG	4 cut(s)	518, 692, 1033, 1455
SmlI	CTYRAG	2 cut(s)	375, 887
SmoI	CTYRAG	2 cut(s)	375, 887
SphI	GCATGC	1 cut(s)	656
SspDI	GGCGCC	1 cut(s)	1066
SspI	AATATT	1 cut(s)	1346
SspMI	CTAG	6 cut(s)	834, 996, 1202, 1283, 1410, 1517
StyD4I	CCNGG	6 cut(s)	326, 1156, 1217, 1263, 1717, 2212
StyI	CCWWGG	2 cut(s)	693, 1456
TaaI	ACNGT	4 cut(s)	283, 775, 951, 2283
TaiI	ACGT	2 cut(s)	174, 2055
TaqI	TCGA	5 cut(s)	260, 473, 552, 570, 822
TauI	GCSGC	8 cut(s)	128, 323, 833, 1067, 1225, 1372, 1553, 1604
TfiI	GAWTC	4 cut(s)	155, 428, 598, 1483
Tru1I	TTAA	2 cut(s)	1002, 1728
Tru9I	TTAA	2 cut(s)	1002, 1728
TseFI	GTSAC	2 cut(s)	119, 1446
TseI	GCWGC	7 cut(s)	388, 649, 1061, 1372, 1568, 1622, 1661
Tsp45I	GTSAC	2 cut(s)	119, 1446
TspDTI	ATGAA	4 cut(s)	237, 878, 1218, 2023
TspGWI	ACGGA	4 cut(s)	195, 1095, 1335, 1902
Tth111I	GACNNNGTC	2 cut(s)	283, 1444
VpaK11BI	GGWCC	3 cut(s)	610, 1138, 1610
VspI	ATTAAT	1 cut(s)	1728
XapI	RAATTY	2 cut(s)	1771, 1890
XceI	RCATGY	4 cut(s)	238, 656, 1939, 2240
XcmI	CCANNNNNNNNNTGG	2 cut(s)	47, 472
XmiI	GTMKAC	1 cut(s)	960
XmnI	GAANNNNTTC	2 cut(s)	104, 187
XspI	CTAG	6 cut(s)	834, 996, 1202, 1283, 1410, 1517
ZraI	GACGTC	2 cut(s)	172, 2053

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.