Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0009278

Physical Location & Seq

Genomic Coordinates Reverse (-)

38517529 .. 38523837

Gene Structure 6309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1254700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2316 bp

ATGGAGAGCAGCGAAGAAGACGACGACTTTCCATCGATCGAGAGCATCACTCCCCAGTCCAAAGTCGACTCTCTTTACCAATCCCGCTCTGAAAAGGGAATTAGAAAGCTATGCTGCGAGCTGTTAGATTTAAAGGATGCAGTGGAGAACTTATGTGGGAATATGAGAACAAAGTATTTGGCTTTTTTGAGGATATCTGAGGAGGCTGTAGAAATGGAGCACGAGTTGGTTGAGCTCCGAAAGCATATTTCAACTCAAGGGATTCTTGTGCAGGATTTGATGACTGGTGTATGCCATCAATTGGAACAGTGGAATCGGTCTACAAGTGAAGTCGAGCCAAACCCTGATATTTGTGAACTTCAAGATCCATTGCCAATTGAAACAGACAATCACAAGATTTTTTTGGAGAAAATTGATGTTCTCTTAGCTGAACATAAAGTAGAAGAAGCATTAGAGGCTCTAGATGCTGAAGAGAGAAACTCTCCAGAGCTGAAAAGCTCGGGAGATACTTCAACAACTGATGGATCCTCATACAGATCCGATTTCTTGAAAAGAAAAGCACTGCTCGAGGATCAGCTGGTTGAGATTATTGGACAACCTTTTATTAGTTTTGTTGAGTTGAAGAAGGCCTTAAGTGGGCTAATAAAGCTTGGAAAAGGCCCTTTGGCACACCAGTTACTGCTCAAATTTTATGGGTCCCATATTGAGAAGAGCACCGAAGCTCTTTTTCCTTCTTCTTCTGTCTGTCCAAAGACATATCCAGCAACATTGTCTAAGCTTGTATTTTCTACAATCTCACTGGCAACGACGAAGTCTGGTTTAATATTTGGTGATGATCGTGTTTATACCAATAGAGTAGTCCAATGGGCAGAGTGGGAAATTGAATACTTTGTACGGTTGGTGAAAGAGAATGCACCATCTTCTGACACGGTGTCTGCTTTACGTGCAGCTAGCATTTGTGTTCAGGCTAGTCTCAACTACTCTTTGATGCTGGAACGACAAGGGCTGAAACTGTCAAAATTGATTCTAGTGTTGTTGCGGCCTTTTATTGAAGAAGTTTTAGAGTTGAACTTTAGACGGGCAAGAAAAGTTGTCCTTGACTTGGTAGAAGCTGATGAGTGCATGTCATTTTCACCTCACTTTGCACCTCCTCTGTCTGCATTCACAACATCATCACATAGTTTGATTGCTGATAGTGGGATAAGATTTATGTGCATTGTTGAAGATATATTGGAACAGTTGACCCCTTTGATCATTTTGCATTTTGGTGGAAACATACTGAGTAGGATCGGACAACTTTTTGATAAATACATGGATGCTTTAATTAAAGCCCTACCAGGTCCATCTGATGATGACAGTCTTACTGAGCTCAAGGAGTTTGTATCTTTTAGAGCTGAAACAGATTCAGAACAGCTTGCCCTTTTGGGAGTTGCATTTACCATCTTGGATGAACTACTGCCGAATGCTGTAATGACCCTCTGGAAGCAGCAGACTGAAAGTGGGGAACCAAAAAGTGGACTTGCTGAAAATGTCACACCTATTCCAAGTACTTCTGCAGAGTTAAAGGATTGGAAGCGTCGTCTTCAGCATTCATTTGACAAGCTAAGAGACCATTTCTGTCGGCAATATGTCTTGAGCTTCATTTATTCAAGAGAAGGACAGACACGACTGGATGCCCAAATATATTTAAATGGGAATGGTGATGATTTGTATTGGGACTCAGCCCCTTTGCCTTCGCTTCCATTTCAGGCATTATTTGCAAAGCTGCAGCAATTAGCAACCGTGGCTGGAGATGTGTTACTTGGAAAAGAGAGAATTCAGAAAATTTTGCTTGCTAGGATAACCGAGACAGTTGTAATGTGGTTGTCCGATGAACAAGAGTTTTGGGCTGTGTTTGAGGATGATACAGGTCCTCTTCAGCCACTTGGGTTGCAGCAGTTAATTCTTGATATGCACTTCACTGTTGAAATTGCACGTTTTGCGGGTTACCCATCAAGGCATGTGCACCAGATTGCATCAGCTATAATTGCTCGTGCTATCAGGGCTTTTTCTGCTAGAGGCATAGAAGTACAAAGTGCACACTCCGAGGATGAGTGGTTTGTTGAAACTGCAAAGTCAGCGATAAATAAACTACTTTTGGGAGCAGAAGGGTCAGAGACATCCGAGATTGATGAAGATAACATCGCTCTTCATGATGTATTGGATTCAGATGATTCTGTCTCTTCCCTTTCAAGTATAGATTCTTCGGAGTCTTTTGCCTCTGCAAGTATGGGTGAACTTGACAGTCCAAAGCATTTCGACGATTCAGGGGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0001927 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0007154 GO:0008037 GO:0008104 GO:0008150 GO:0009856 GO:0009875 GO:0009987 GO:0016043 GO:0016192 GO:0022406 GO:0022414 GO:0022607 GO:0031503 GO:0032501 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0034629 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0046903 GO:0048278 GO:0048544 GO:0051179 GO:0051234 GO:0051601 GO:0051640 GO:0051641 GO:0051704 GO:0060321 GO:0065003 GO:0070727 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo84_C

Protein Analysis

772

Amino Acids

86.18

Weight (kDa)

4.75

Isoelectric Point (pI)

50.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo84_C	PF16528	135 - 338	1.4e-09	Exocyst component 84 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009278)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10180
fragaria_vesca	FvH4_3g12130 FvH4_3g12130 FvH4_3g12130
malus_domestica	MD05G1254700.v1.1 MD10G1234800.v1.1
prunus_persica	Prupe.4G110000_v2.0.a1 Prupe.4G110000_v2.0.a1
pyrus_communis	pycom05g23270 pycom10g19660
rosa_chinensis	RchiOBHm_Chr5g0019861
rosa_laevigata	RLG00000032479
rosa_multiflora	Rmu_co8414241.1_g000001
rosa_roxburghii	Rroxscaffold_1G00058310
rosa_rugosa	Rorug05G0054300 Rorug05G0054400 Rorug05G0054500.1
rosa_samantha	Rh5AG144700 Rh5BG143800 Rh5CG155500 Rh5DG143600
rosa_wichuraiana	Rw5G012780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	301, 1514
AccBSI	CCGCTC	1 cut(s)	87
AccI	GTMKAC	2 cut(s)	66, 320
AciI	CCGC	3 cut(s)	85, 1039, 1982
AclWI	GGATC	6 cut(s)	359, 519, 531, 532, 579, 1295
AcsI	RAATTY	3 cut(s)	686, 1815, 1824
AcuI	CTGAAG	3 cut(s)	489, 1568, 1901
AfaI	GTAC	3 cut(s)	894, 1549, 2070
AfiI	CCNNNNNNNGG	4 cut(s)	301, 636, 1102, 1514
AflII	CTTAAG	1 cut(s)	631
AhdI	GACNNNNNGTC	1 cut(s)	931
AjnI	CCWGG	1 cut(s)	1336
Alw21I	GWGCWC	6 cut(s)	222, 237, 716, 1371, 2007, 2080
Alw26I	GTCTC	5 cut(s)	977, 1602, 1841, 2150, 2224
Alw44I	GTGCAC	2 cut(s)	2003, 2076
AlwI	GGATC	6 cut(s)	359, 519, 531, 532, 579, 1295
AlwNI	CAGNNNCTG	1 cut(s)	679
Ama87I	CYCGRG	2 cut(s)	499, 566
AoxI	GGCC	3 cut(s)	627, 658, 1040
ApaLI	GTGCAC	2 cut(s)	2003, 2076
ApeKI	GCWGC	7 cut(s)	9, 114, 947, 1486, 1765, 1768, 1933
ApoI	RAATTY	3 cut(s)	686, 1815, 1824
AspS9I	GGNCC	4 cut(s)	659, 696, 1340, 1910
AsuHPI	GGTGA	5 cut(s)	842, 913, 1125, 1712, 2285
AsuNHI	GCTAGC	1 cut(s)	950
AvaI	CYCGRG	2 cut(s)	499, 566
AvaII	GGWCC	3 cut(s)	696, 1340, 1910
BaeGI	GKGCMC	2 cut(s)	2007, 2080
BamHI	GGATCC	1 cut(s)	524
BanII	GRGCYC	2 cut(s)	237, 1371
BarI	GAAGNNNNNNTAC	2 cut(s)	2227, 2259
BauI	CACGAG	2 cut(s)	221, 2031
BbsI	GAAGAC	2 cut(s)	24, 1574
Bbv12I	GWGCWC	6 cut(s)	222, 237, 716, 1371, 2007, 2080
BbvI	GCAGC	7 cut(s)	21, 101, 959, 1498, 1752, 1780, 1945
BccI	CCATC	7 cut(s)	40, 303, 515, 925, 1351, 1448, 1999
BciT130I	CCWGG	1 cut(s)	1338
BclI	TGATCA	1 cut(s)	1251
BcoDI	GTCTC	5 cut(s)	977, 1602, 1841, 2150, 2224
BfaI	CTAG	6 cut(s)	461, 951, 969, 1028, 1836, 2055
BfmI	CTRYAG	3 cut(s)	207, 1554, 1766
BfrI	CTTAAG	1 cut(s)	631
BisI	GCNGC	8 cut(s)	10, 115, 948, 1040, 1487, 1766, 1769, 1934
BlsI	GCNGC	8 cut(s)	11, 116, 949, 1041, 1488, 1767, 1770, 1935
BmcAI	AGTACT	1 cut(s)	1549
Bme1390I	CCNGG	1 cut(s)	1338
Bme18I	GGWCC	3 cut(s)	696, 1340, 1910
BmeRI	GACNNNNNGTC	1 cut(s)	931
BmeT110I	CYCGRG	2 cut(s)	499, 566
BmgT120I	GGNCC	4 cut(s)	659, 696, 1340, 1910
BmiI	GGNNCC	4 cut(s)	526, 697, 698, 1506
BmrFI	CCNGG	1 cut(s)	1338
BmrI	ACTGGG	1 cut(s)	49
BmsI	GCATC	7 cut(s)	54, 127, 454, 978, 1306, 1663, 2024
BmtI	GCTAGC	1 cut(s)	954
BmuI	ACTGGG	1 cut(s)	49
BpiI	GAAGAC	2 cut(s)	24, 1574
BplI	GAGNNNNNCTC	6 cut(s)	34, 66, 464, 496, 466, 498
BpmI	CTGGAG	2 cut(s)	468, 1809
BpuEI	CTTGAG	3 cut(s)	240, 1355, 1654
Bsa29I	ATCGAT	1 cut(s)	35
BsaAI	YACGTR	1 cut(s)	944
BsaI	GGTCTC	1 cut(s)	1602
BsaJI	CCNNGG	2 cut(s)	1782, 2085
BsaXI	ACNNNNNCTCC	2 cut(s)	209, 239
Bsc4I	CCNNNNNNNGG	4 cut(s)	301, 636, 1102, 1514
Bse1I	ACTGG	5 cut(s)	55, 289, 673, 804, 1674
Bse3DI	GCAATG	1 cut(s)	368
BseBI	CCWGG	1 cut(s)	1338
BseCI	ATCGAT	1 cut(s)	35
BseDI	CCNNGG	2 cut(s)	1782, 2085
BseGI	GGATG	7 cut(s)	142, 1321, 1453, 1678, 1906, 2095, 2159
BseLI	CCNNNNNNNGG	4 cut(s)	301, 636, 1102, 1514
BseMI	GCAATG	1 cut(s)	368
BseMII	CTCAG	4 cut(s)	189, 1271, 1356, 1734
BseNI	ACTGG	5 cut(s)	55, 289, 673, 804, 1674
BseRI	GAGGAG	2 cut(s)	215, 1140
BseSI	GKGCMC	2 cut(s)	2007, 2080
BseXI	GCAGC	7 cut(s)	21, 101, 959, 1498, 1752, 1780, 1945
BsgI	GTGCAG	2 cut(s)	290, 966
Bsh1285I	CGRYCG	1 cut(s)	39
BshFI	GGCC	3 cut(s)	629, 660, 1042
BshVI	ATCGAT	1 cut(s)	35
BsiEI	CGRYCG	1 cut(s)	39
BsiHKAI	GWGCWC	6 cut(s)	222, 237, 716, 1371, 2007, 2080
BsiHKCI	CYCGRG	2 cut(s)	499, 566
BslFI	GGGAC	2 cut(s)	682, 1730
BslI	CCNNNNNNNGG	4 cut(s)	301, 636, 1102, 1514
BsmAI	GTCTC	5 cut(s)	977, 1602, 1841, 2150, 2224
BsmFI	GGGAC	2 cut(s)	682, 1730
BsmI	GAATGC	4 cut(s)	916, 1160, 1468, 1588
BsnI	GGCC	3 cut(s)	629, 660, 1042
Bso31I	GGTCTC	1 cut(s)	1602
BsoBI	CYCGRG	2 cut(s)	499, 566
Bsp1286I	GDGCHC	6 cut(s)	222, 237, 716, 1371, 2007, 2080
Bsp143I	GATC	8 cut(s)	36, 364, 524, 536, 571, 835, 1251, 1287
BspACI	CCGC	3 cut(s)	85, 1039, 1982
BspANI	GGCC	3 cut(s)	629, 660, 1042
BspCNI	CTCAG	4 cut(s)	190, 1272, 1357, 1733
BspDI	ATCGAT	1 cut(s)	35
BspHI	TCATGA	1 cut(s)	2191
BspLI	GGNNCC	4 cut(s)	526, 697, 698, 1506
BspMAI	CTGCAG	2 cut(s)	1558, 1770
BspOI	GCTAGC	1 cut(s)	954
BspPI	GGATC	6 cut(s)	359, 519, 531, 532, 579, 1295
BspQI	GCTCTTC	2 cut(s)	704, 2193
BspTI	CTTAAG	1 cut(s)	631
BspTNI	GGTCTC	1 cut(s)	1602
BsrBI	CCGCTC	1 cut(s)	87
BsrDI	GCAATG	1 cut(s)	368
BsrI	ACTGG	5 cut(s)	55, 289, 673, 804, 1674
BssECI	CCNNGG	2 cut(s)	1782, 2085
BssMI	GATC	8 cut(s)	36, 364, 524, 536, 571, 835, 1251, 1287
BssSI	CACGAG	2 cut(s)	221, 2031
Bst2BI	CACGAG	2 cut(s)	221, 2031
Bst2UI	CCWGG	1 cut(s)	1338
Bst6I	CTCTTC	5 cut(s)	465, 704, 1920, 2193, 2227
BstAFI	CTTAAG	1 cut(s)	631
BstAPI	GCANNNNNTGC	2 cut(s)	1757, 1979
BstBAI	YACGTR	1 cut(s)	944
BstC8I	GCNNGC	4 cut(s)	119, 952, 1416, 1833
BstDEI	CTNAG	7 cut(s)	198, 424, 774, 1280, 1365, 1604, 1720
BstDSI	CCRYGG	1 cut(s)	1782
BstEII	GGTNACC	1 cut(s)	1985
BstF5I	GGATG	7 cut(s)	142, 1321, 1453, 1678, 1906, 2095, 2159
BstKTI	GATC	8 cut(s)	39, 367, 527, 539, 574, 838, 1254, 1290
BstMAI	GTCTC	5 cut(s)	977, 1602, 1841, 2150, 2224
BstMBI	GATC	8 cut(s)	36, 364, 524, 536, 571, 835, 1251, 1287
BstMCI	CGRYCG	1 cut(s)	39
BstNI	CCWGG	1 cut(s)	1338
BstNSI	RCATGY	2 cut(s)	1126, 2003
BstPI	GGTNACC	1 cut(s)	1985
BstSCI	CCNGG	1 cut(s)	1336
BstSFI	CTRYAG	3 cut(s)	207, 1554, 1766
BstSLI	GKGCMC	2 cut(s)	2007, 2080
BstV1I	GCAGC	7 cut(s)	21, 101, 959, 1498, 1752, 1780, 1945
BstV2I	GAAGAC	2 cut(s)	24, 1574
BstX2I	RGATCY	3 cut(s)	364, 524, 536
BstYI	RGATCY	3 cut(s)	364, 524, 536
Bsu15I	ATCGAT	1 cut(s)	35
BsuRI	GGCC	3 cut(s)	629, 660, 1042
BsuTUI	ATCGAT	1 cut(s)	35
BtgI	CCRYGG	1 cut(s)	1782
BtgZI	GCGATG	1 cut(s)	2167
BtsCI	GGATG	7 cut(s)	142, 1321, 1453, 1678, 1906, 2095, 2159
BtsI	GCAGTG	2 cut(s)	147, 560
BtsIMutI	CAGTG	5 cut(s)	147, 314, 560, 797, 1959
Cac8I	GCNNGC	4 cut(s)	119, 952, 1416, 1833
CaiI	CAGNNNCTG	1 cut(s)	679
CciI	TCATGA	1 cut(s)	2191
Cfr13I	GGNCC	4 cut(s)	659, 696, 1340, 1910
ClaI	ATCGAT	1 cut(s)	35
CseI	GACGC	1 cut(s)	1565
CsiI	ACCWGGT	1 cut(s)	1336
Csp6I	GTAC	3 cut(s)	893, 1548, 2069
CspCI	CAANNNNNGTGG	2 cut(s)	1911, 1946
CviAII	CATG	4 cut(s)	1123, 1312, 2000, 2192
CviQI	GTAC	3 cut(s)	893, 1548, 2069
DdeI	CTNAG	7 cut(s)	198, 424, 774, 1280, 1365, 1604, 1720
DpnI	GATC	8 cut(s)	38, 366, 526, 538, 573, 837, 1253, 1289
DpnII	GATC	8 cut(s)	36, 364, 524, 536, 571, 835, 1251, 1287
DraI	TTTAAA	2 cut(s)	132, 1689
DriI	GACNNNNNGTC	1 cut(s)	931
Eam1104I	CTCTTC	5 cut(s)	465, 704, 1920, 2193, 2227
Eam1105I	GACNNNNNGTC	1 cut(s)	931
EarI	CTCTTC	5 cut(s)	465, 704, 1920, 2193, 2227
Ecl136II	GAGCTC	2 cut(s)	235, 1369
Eco147I	AGGCCT	1 cut(s)	629
Eco24I	GRGCYC	2 cut(s)	237, 1371
Eco31I	GGTCTC	1 cut(s)	1602
Eco32I	GATATC	1 cut(s)	195
Eco47I	GGWCC	3 cut(s)	696, 1340, 1910
Eco53kI	GAGCTC	2 cut(s)	235, 1369
Eco57I	CTGAAG	3 cut(s)	489, 1568, 1901
Eco88I	CYCGRG	2 cut(s)	499, 566
Eco91I	GGTNACC	1 cut(s)	1985
EcoICRI	GAGCTC	2 cut(s)	235, 1369
EcoO109I	RGGNCCY	3 cut(s)	659, 696, 1910
EcoO65I	GGTNACC	1 cut(s)	1985
EcoRI	GAATTC	1 cut(s)	1815
EcoRII	CCWGG	1 cut(s)	1336
EcoRV	GATATC	1 cut(s)	195
EcoT38I	GRGCYC	2 cut(s)	237, 1371
FaeI	CATG	4 cut(s)	1126, 1315, 2003, 2195
FalI	AAGNNNNNCTT	6 cut(s)	249, 281, 614, 646, 1080, 1112
FaqI	GGGAC	2 cut(s)	682, 1730
FatI	CATG	4 cut(s)	1122, 1311, 1999, 2191
FauI	CCCGC	2 cut(s)	92, 1975
FbaI	TGATCA	1 cut(s)	1251
FblI	GTMKAC	2 cut(s)	66, 320
Fnu4HI	GCNGC	8 cut(s)	10, 115, 948, 1040, 1487, 1766, 1769, 1934
FokI	GGATG	7 cut(s)	149, 1328, 1460, 1685, 1913, 2102, 2146
FriOI	GRGCYC	2 cut(s)	237, 1371
Fsp4HI	GCNGC	8 cut(s)	10, 115, 948, 1040, 1487, 1766, 1769, 1934
FspBI	CTAG	6 cut(s)	461, 951, 969, 1028, 1836, 2055
GluI	GCNGC	8 cut(s)	10, 115, 948, 1040, 1487, 1766, 1769, 1934
GsuI	CTGGAG	2 cut(s)	468, 1809
HaeIII	GGCC	3 cut(s)	629, 660, 1042
HgaI	GACGC	1 cut(s)	1565
Hin1II	CATG	4 cut(s)	1126, 1315, 2003, 2195
HincII	GTYRAC	2 cut(s)	67, 1242
HindII	GTYRAC	2 cut(s)	67, 1242
HindIII	AAGCTT	2 cut(s)	647, 776
HphI	GGTGA	5 cut(s)	842, 913, 1125, 1712, 2285
Hpy166II	GTNNAC	8 cut(s)	67, 321, 356, 1242, 1517, 2005, 2078, 2276
Hpy8I	GTNNAC	8 cut(s)	67, 321, 356, 1242, 1517, 2005, 2078, 2276
Hpy99I	CGWCG	4 cut(s)	26, 811, 1581, 2303
HpyAV	CCTTC	5 cut(s)	619, 741, 1649, 1743, 2141
HpyCH4IV	ACGT	2 cut(s)	943, 1975
HpyF3I	CTNAG	7 cut(s)	198, 424, 774, 1280, 1365, 1604, 1720
HpySE526I	ACGT	2 cut(s)	943, 1975
Hsp92II	CATG	4 cut(s)	1126, 1315, 2003, 2195
KflI	GGGWCCC	1 cut(s)	696
Ksp22I	TGATCA	1 cut(s)	1251
Kzo9I	GATC	8 cut(s)	36, 364, 524, 536, 571, 835, 1251, 1287
LguI	GCTCTTC	2 cut(s)	704, 2193
LmnI	GCTCC	3 cut(s)	217, 240, 2141
Lsp1109I	GCAGC	7 cut(s)	21, 101, 959, 1498, 1752, 1780, 1945
LweI	GCATC	7 cut(s)	54, 127, 454, 978, 1306, 1663, 2024
MabI	ACCWGGT	1 cut(s)	1336
MaeI	CTAG	6 cut(s)	461, 951, 969, 1028, 1836, 2055
MaeII	ACGT	2 cut(s)	943, 1975
MaeIII	GTNAC	4 cut(s)	675, 1531, 1797, 1985
MalI	GATC	8 cut(s)	38, 366, 526, 538, 573, 837, 1253, 1289
MbiI	CCGCTC	1 cut(s)	87
MboI	GATC	8 cut(s)	36, 364, 524, 536, 571, 835, 1251, 1287
MfeI	CAATTG	2 cut(s)	299, 375
MflI	RGATCY	3 cut(s)	364, 524, 536
MhlI	GDGCHC	6 cut(s)	222, 237, 716, 1371, 2007, 2080
MlyI	GAGTC	3 cut(s)	62, 1712, 2258
MseI	TTAA	8 cut(s)	131, 632, 821, 1322, 1326, 1562, 1688, 1940
MslI	CAYNNNNRTG	1 cut(s)	1266
MspA1I	CMGCKG	1 cut(s)	577
MspCI	CTTAAG	1 cut(s)	631
MspR9I	CCNGG	1 cut(s)	1338
MunI	CAATTG	2 cut(s)	299, 375
Mva1269I	GAATGC	4 cut(s)	916, 1160, 1468, 1588
MvaI	CCWGG	1 cut(s)	1338
NdeII	GATC	8 cut(s)	36, 364, 524, 536, 571, 835, 1251, 1287
NheI	GCTAGC	1 cut(s)	950
NlaIII	CATG	4 cut(s)	1126, 1315, 2003, 2195
NlaIV	GGNNCC	4 cut(s)	526, 697, 698, 1506
NmuCI	GTSAC	1 cut(s)	1531
NspI	RCATGY	2 cut(s)	1126, 2003
PacI	TTAATTAA	1 cut(s)	1326
PaeR7I	CTCGAG	1 cut(s)	566
PagI	TCATGA	1 cut(s)	2191
PceI	AGGCCT	1 cut(s)	629
PciSI	GCTCTTC	2 cut(s)	704, 2193
PctI	GAATGC	4 cut(s)	916, 1160, 1468, 1588
PfeI	GAWTC	8 cut(s)	262, 313, 1024, 1403, 2204, 2213, 2240, 2303
PflFI	GACNNNGTC	1 cut(s)	811
PflMI	CCANNNNNTGG	2 cut(s)	301, 1514
PkrI	GCNGC	8 cut(s)	11, 116, 949, 1041, 1488, 1767, 1770, 1935
Ple19I	CGATCG	1 cut(s)	39
PleI	GAGTC	3 cut(s)	62, 1712, 2257
PpsI	GAGTC	3 cut(s)	62, 1712, 2257
Ppu21I	YACGTR	1 cut(s)	944
PpuMI	RGGWCCY	2 cut(s)	696, 1910
Psp124BI	GAGCTC	2 cut(s)	237, 1371
Psp5II	RGGWCCY	2 cut(s)	696, 1910
Psp6I	CCWGG	1 cut(s)	1336
PspEI	GGTNACC	1 cut(s)	1985
PspGI	CCWGG	1 cut(s)	1336
PspN4I	GGNNCC	4 cut(s)	526, 697, 698, 1506
PspPI	GGNCC	4 cut(s)	659, 696, 1340, 1910
PspPPI	RGGWCCY	2 cut(s)	696, 1910
PspXI	VCTCGAGB	1 cut(s)	566
PstI	CTGCAG	2 cut(s)	1558, 1770
PstNI	CAGNNNCTG	1 cut(s)	679
PsuI	RGATCY	3 cut(s)	364, 524, 536
PsyI	GACNNNGTC	1 cut(s)	811
PvuI	CGATCG	1 cut(s)	39
PvuII	CAGCTG	1 cut(s)	577
RsaI	GTAC	3 cut(s)	894, 1549, 2070
RsaNI	GTAC	3 cut(s)	893, 1548, 2069
RseI	CAYNNNNRTG	1 cut(s)	1266
SacI	GAGCTC	2 cut(s)	237, 1371
SalI	GTCGAC	1 cut(s)	65
SapI	GCTCTTC	2 cut(s)	704, 2193
SaqAI	TTAA	8 cut(s)	131, 632, 821, 1322, 1326, 1562, 1688, 1940
SatI	GCNGC	8 cut(s)	10, 115, 948, 1040, 1487, 1766, 1769, 1934
Sau3AI	GATC	8 cut(s)	36, 364, 524, 536, 571, 835, 1251, 1287
Sau96I	GGNCC	4 cut(s)	659, 696, 1340, 1910
ScaI	AGTACT	1 cut(s)	1549
SchI	GAGTC	3 cut(s)	62, 1712, 2258
ScrFI	CCNGG	1 cut(s)	1338
SduI	GDGCHC	6 cut(s)	222, 237, 716, 1371, 2007, 2080
SexAI	ACCWGGT	1 cut(s)	1336
SfaNI	GCATC	7 cut(s)	54, 127, 454, 978, 1306, 1663, 2024
SfcI	CTRYAG	3 cut(s)	207, 1554, 1766
Sfr274I	CTCGAG	1 cut(s)	566
SinI	GGWCC	3 cut(s)	696, 1340, 1910
SlaI	CTCGAG	1 cut(s)	566
SmiI	ATTTAAAT	1 cut(s)	1689
SmiMI	CAYNNNNRTG	1 cut(s)	1266
SmlI	CTYRAG	5 cut(s)	255, 566, 631, 1370, 1633
SmoI	CTYRAG	5 cut(s)	255, 566, 631, 1370, 1633
SseBI	AGGCCT	1 cut(s)	629
SsiI	CCGC	3 cut(s)	85, 1039, 1982
SspI	AATATT	1 cut(s)	825
SspMI	CTAG	6 cut(s)	461, 951, 969, 1028, 1836, 2055
SstI	GAGCTC	2 cut(s)	237, 1371
StuI	AGGCCT	1 cut(s)	629
StyD4I	CCNGG	1 cut(s)	1336
SwaI	ATTTAAAT	1 cut(s)	1689
TaiI	ACGT	2 cut(s)	946, 1978
TaqI	TCGA	6 cut(s)	35, 39, 66, 333, 567, 2298
TaqII	GACCGA	1 cut(s)	306
TatI	WGTACW	2 cut(s)	1547, 2068
TauI	GCSGC	1 cut(s)	1042
TfiI	GAWTC	8 cut(s)	262, 313, 1024, 1403, 2204, 2213, 2240, 2303
Tru1I	TTAA	8 cut(s)	131, 632, 821, 1322, 1326, 1562, 1688, 1940
Tru9I	TTAA	8 cut(s)	131, 632, 821, 1322, 1326, 1562, 1688, 1940
TscAI	CASTG	5 cut(s)	147, 314, 567, 804, 1966
TseFI	GTSAC	1 cut(s)	1531
TseI	GCWGC	7 cut(s)	9, 114, 947, 1486, 1765, 1768, 1933
Tsp45I	GTSAC	1 cut(s)	1531
TspDTI	ATGAA	6 cut(s)	1464, 1581, 1630, 1887, 2180, 2187
TspRI	CASTG	5 cut(s)	147, 314, 567, 804, 1966
Tth111I	GACNNNGTC	1 cut(s)	811
Van91I	CCANNNNNTGG	2 cut(s)	301, 1514
Vha464I	CTTAAG	1 cut(s)	631
VneI	GTGCAC	2 cut(s)	2003, 2076
VpaK11BI	GGWCC	3 cut(s)	696, 1340, 1910
XapI	RAATTY	3 cut(s)	686, 1815, 1824
XbaI	TCTAGA	1 cut(s)	460
XceI	RCATGY	2 cut(s)	1126, 2003
XhoI	CTCGAG	1 cut(s)	566
XmiI	GTMKAC	2 cut(s)	66, 320
XspI	CTAG	6 cut(s)	461, 951, 969, 1028, 1836, 2055
ZrmI	AGTACT	1 cut(s)	1549

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.