Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0009278

Physical Location & Seq

Genomic Coordinates Forward (+)

15270168 .. 15275109

Gene Structure 4942 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG144700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGATTCACCTGGTCTTCATTTTTAATTGTAGGATATCTGAGGAGGCTGTTGAAATGGAGCATGAGTTGGTTGAGCTCCAAAAGCACATTTCATCTCAAGGGATTCTTGTGCAGGATTTGATGACTGGTGTATTCCGTGAATTGGAAGGATGGAATCAATCTAGTAGTGATGTTCAGAAAAATTCTGAGATTCATGAACTTCAAGATCCCTTGCCAACTGAAGCAGATGATCACAAGATATTTTTGGACAAAATTGACGTTCTCTTAGCTGAACATAAAGTGGAAGAAGCGTTAGAGGCTTTAGATGCTGAGGAGAGAAACTGTCCCGATCTGAAGAGTTCTGCAGATACTTCATCAACTGAAGGATCAACATACAGATCTGTTTTCTTGAAAAGAAAAGCATTGCTTGAGGATCAGCTAGTCGAGATTACTAGACAACCTTTTATAAGTTTTGTCGAGTTGCAGAAGGCTTTAATGGGGTTAATGAAGCTTGGAAAAGGTCCGTTGGCACATCAGTTATTGCTGAAATTTTATGGGTCCCGTCTTCAAAAGCGCATTGAGGCTCTATTTCCTTCTTGCTCTGTATGCCCTAAGACATATCCAGCAACATTATCCAAGCTCGTTTTTTCTATAATTTCATCGGCAACCCAGAAATCTGGTTTGATTTTTGGTGATAATCCTGTTTATACAAACAGAGTTGTTCAATGGGCAGAGTGGGAAATTGAATACTTTGTACGGTCGGTGAAAGAGAATGCACCGTCTTCGGAGACAGCTTCTGCTTTAGGTGCAGCTAGCATTTGTGTACAGGCTAGTCTCAGCTACTCCTCAGTGCTGGAAAGGCAAGGTCTGAAATTGTCGAAATTAATTTTGGTGCTGTTGCGGCCTTTCATTGAAGAAGTTTTAGAGTTGAACTTTAGACGGGCTAGAAAATTTGTTCTTGACTTGGTGGTAGCTGATGAGTGCATGTCATTTTCACCTCGCTTTGCACCTCCATTGTCTGCGTTTACAACGTCATCAGAGGGTGTTCTTGTCGATAGCGGGATAAGATTTATGTGCATTATTGAAGATATATTGGAACAGTTGACCCCTATGATCATTTTGCATTTTGGGGGAAACATATTGAGCAGGATTGGAACTCTTTTTGATAAATACATGGATGCTCTAATTAAAGCCCTGCCAGAATCATCTGATGATGACACTCTTACAGAGCTCAAGGAGTTTGTACCCTTTAGAGCTGAAACAGATTCAGAACAGCTTGCCATTTTGGGAGTTGCATTTACCATTGTGGATGAACTACTACCCAATGCTGTAATGACTCTTTGGAAGCAGCAGAGTGAAAGTGTGGAACCAAAAAGTGGACCTGCTGAGAATGTCATGTCTAGTCCAAGCACTTCTACAGAGTTCAAGGATTGGAGACGCCATCTTCAGCATTCGTTTGACAAGCTAAGAGACCATTTCTGCCGGCAATATGTCTTGAGCTTCATCTATTCGAGAGAAGGGAAAACACGATTGGATGCACAAATATATCTGAGTGAGAACGGGGATGATTTGTATTGGGACTCTGACCCTTTGCCTTCGCTTCCATTTCAGGCATTATTTGCAAAGCTGCAGCAATTAGCTACTGTGGCAGGAGATGTATTACTTGGAAAAGAGAAAATACAGAAAATTTTACTTGCTAGGCTAACGGAGACTGTTCTAATGTGGTTGTCTGATGAACAAGAGTTTTGGAGTGTCTTTGAGAATGATACATGTCCTCTTCAGCCATTTGGGTTGCAGCAGCTGATTCTTGACATGCACTTCACTGTGGAAATTGCACGTTTTGCGGGGTACCCACCACGGCATGTGCACCAAATTGCATCGGCCATAATTGCTCGTGCTATCAGGGCCTTTTCTGCTAAAGGGATAGAACCGCAAACTGCACTTCCGGAGGATGAGTGGTTTGTTGAAACTGCAAAATCATCAATAAACAAGCTACTTTTGGGAACTGAAGGGTCAGAGACATCGGAAGTTGACCAAGATCACATCAATCTACACGGCCATATCGTCATGGATTCAGATGACGACGACGACGACGACGATGATTCTGACTCTTCCCTCTCATCGGTAGAGTCTACTGAGTCTTTTGCTTCCGCAAGTATGGGTGAACTTGATAGTCCAAGGAATTTTGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0001927 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0007154 GO:0008037 GO:0008104 GO:0008150 GO:0009856 GO:0009875 GO:0009987 GO:0016043 GO:0016192 GO:0022406 GO:0022414 GO:0022607 GO:0031503 GO:0032501 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0034629 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0046903 GO:0048278 GO:0048544 GO:0051179 GO:0051234 GO:0051601 GO:0051640 GO:0051641 GO:0051704 GO:0060321 GO:0065003 GO:0070727 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo84_C

Protein Analysis

724

Amino Acids

81.4

Weight (kDa)

4.7

Isoelectric Point (pI)

55.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo84_C	PF16528	82 - 285	6.1e-09	Exocyst component 84 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009278)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10180
fragaria_vesca	FvH4_3g12130 FvH4_3g12130 FvH4_3g12130
malus_domestica	MD05G1254700.v1.1 MD10G1234800.v1.1
prunus_persica	Prupe.4G110000_v2.0.a1 Prupe.4G110000_v2.0.a1
pyrus_communis	pycom05g23270 pycom10g19660
rosa_chinensis	RchiOBHm_Chr5g0019861
rosa_laevigata	RLG00000032479
rosa_multiflora	Rmu_co8414241.1_g000001
rosa_roxburghii	Rroxscaffold_1G00058310
rosa_rugosa	Rorug05G0054300 Rorug05G0054400 Rorug05G0054500.1
rosa_samantha	Rh5AG144700 Rh5BG143800 Rh5CG155500 Rh5DG143600
rosa_wichuraiana	Rw5G012780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	446
Acc36I	ACCTGC	1 cut(s)	1369
Acc65I	GGTACC	1 cut(s)	1827
AccB1I	GGYRCC	1 cut(s)	1827
AccB7I	CCANNNNNTGG	1 cut(s)	1355
AccI	GTMKAC	1 cut(s)	2111
AccIII	TCCGGA	1 cut(s)	1924
AciI	CCGC	5 cut(s)	880, 1038, 1823, 1910, 2130
AclWI	GGATC	3 cut(s)	200, 373, 420
AcoI	YGGCCR	2 cut(s)	1860, 2035
AcsI	RAATTY	5 cut(s)	181, 527, 929, 1665, 2161
AcuI	CTGAAG	6 cut(s)	240, 353, 381, 1409, 1742, 2007
AcyI	GRCGYC	1 cut(s)	1417
AfaI	GTAC	4 cut(s)	735, 804, 1224, 1829
AfiI	CCNNNNNNNGG	3 cut(s)	142, 1355, 2101
AflIII	ACRYGT	1 cut(s)	1748
AjnI	CCWGG	1 cut(s)	9
AjuI	GAANNNNNNNTTGG	4 cut(s)	851, 883, 1493, 1525
Alw21I	GWGCWC	3 cut(s)	78, 1212, 1848
Alw26I	GTCTC	6 cut(s)	761, 818, 1408, 1443, 1682, 1991
Alw44I	GTGCAC	1 cut(s)	1844
AlwI	GGATC	3 cut(s)	200, 373, 420
AlwNI	CAGNNNCTG	2 cut(s)	776, 1780
Aor13HI	TCCGGA	1 cut(s)	1924
AoxI	GGCC	4 cut(s)	881, 1860, 1884, 2035
ApaLI	GTGCAC	1 cut(s)	1844
ApeKI	GCWGC	6 cut(s)	788, 1327, 1606, 1609, 1774, 1777
ApoI	RAATTY	5 cut(s)	181, 527, 929, 1665, 2161
AseI	ATTAAT	1 cut(s)	863
Asp718I	GGTACC	1 cut(s)	1827
AspLEI	GCGC	1 cut(s)	555
AspS9I	GGNCC	4 cut(s)	500, 537, 1358, 1884
AsuHPI	GGTGA	4 cut(s)	683, 754, 966, 2153
AsuNHI	GCTAGC	1 cut(s)	791
AvaII	GGWCC	3 cut(s)	500, 537, 1358
BaeGI	GKGCMC	1 cut(s)	1848
BanI	GGYRCC	1 cut(s)	1827
BanII	GRGCYC	2 cut(s)	78, 1212
BauI	CACGAG	1 cut(s)	1872
BbsI	GAAGAC	3 cut(s)	7, 536, 753
Bbv12I	GWGCWC	3 cut(s)	78, 1212, 1848
BbvCI	CCTCAGC	1 cut(s)	309
BbvI	GCAGC	6 cut(s)	800, 1339, 1593, 1621, 1786, 1789
BccI	CCATC	2 cut(s)	144, 1428
BceAI	ACGGC	2 cut(s)	1853, 2050
BcgI	CGANNNNNNTGC	2 cut(s)	744, 778
BciT130I	CCWGG	1 cut(s)	11
BclI	TGATCA	2 cut(s)	229, 1092
BcoDI	GTCTC	6 cut(s)	761, 818, 1408, 1443, 1682, 1991
BfaI	CTAG	8 cut(s)	162, 419, 432, 792, 810, 924, 1380, 1677
BfmI	CTRYAG	3 cut(s)	342, 1395, 1607
BfuAI	ACCTGC	1 cut(s)	1369
BglII	AGATCT	1 cut(s)	377
BisI	GCNGC	7 cut(s)	789, 881, 1328, 1607, 1610, 1775, 1778
BlsI	GCNGC	7 cut(s)	790, 882, 1329, 1608, 1611, 1776, 1779
Bme1390I	CCNGG	1 cut(s)	11
Bme18I	GGWCC	3 cut(s)	500, 537, 1358
BmgT120I	GGNCC	4 cut(s)	500, 537, 1358, 1884
BmiI	GGNNCC	4 cut(s)	538, 539, 1347, 1829
BmrFI	CCNGG	1 cut(s)	11
BmsI	GCATC	4 cut(s)	295, 1147, 1504, 1865
BmtI	GCTAGC	1 cut(s)	795
BpiI	GAAGAC	3 cut(s)	7, 536, 753
Bpu10I	CCTNAGC	1 cut(s)	309
BpuEI	CTTGAG	4 cut(s)	81, 428, 1196, 1495
BsaHI	GRCGYC	1 cut(s)	1417
BsaI	GGTCTC	1 cut(s)	1443
BsaJI	CCNNGG	2 cut(s)	1835, 2156
BsaWI	WCCGGW	1 cut(s)	1924
BsaXI	ACNNNNNCTCC	4 cut(s)	50, 80, 1919, 1949
Bsc4I	CCNNNNNNNGG	3 cut(s)	142, 1355, 2101
Bse118I	RCCGGY	1 cut(s)	1461
Bse1I	ACTGG	1 cut(s)	130
Bse3DI	GCAATG	1 cut(s)	401
BseAI	TCCGGA	1 cut(s)	1924
BseBI	CCWGG	1 cut(s)	11
BseDI	CCNNGG	2 cut(s)	1835, 2156
BseGI	GGATG	6 cut(s)	155, 1162, 1294, 1519, 1549, 1936
BseLI	CCNNNNNNNGG	3 cut(s)	142, 1355, 2101
BseMI	GCAATG	1 cut(s)	401
BseMII	CTCAG	8 cut(s)	30, 177, 300, 829, 840, 1356, 1520, 2106
BseNI	ACTGG	1 cut(s)	130
BseRI	GAGGAG	3 cut(s)	56, 326, 814
BseSI	GKGCMC	1 cut(s)	1848
BseXI	GCAGC	6 cut(s)	800, 1339, 1593, 1621, 1786, 1789
BsgI	GTGCAG	3 cut(s)	131, 807, 1902
Bsh1285I	CGRYCG	1 cut(s)	740
BshFI	GGCC	4 cut(s)	883, 1862, 1886, 2037
BshNI	GGYRCC	1 cut(s)	1827
BsiEI	CGRYCG	1 cut(s)	740
BsiHKAI	GWGCWC	3 cut(s)	78, 1212, 1848
BsiSI	CCGG	2 cut(s)	1462, 1925
BslFI	GGGAC	3 cut(s)	309, 523, 1571
BslI	CCNNNNNNNGG	3 cut(s)	142, 1355, 2101
BsmAI	GTCTC	6 cut(s)	761, 818, 1408, 1443, 1682, 1991
BsmBI	CGTCTC	1 cut(s)	1408
BsmFI	GGGAC	3 cut(s)	309, 523, 1571
BsmI	GAATGC	2 cut(s)	757, 1429
BsnI	GGCC	4 cut(s)	883, 1862, 1886, 2037
Bso31I	GGTCTC	1 cut(s)	1443
Bsp1286I	GDGCHC	3 cut(s)	78, 1212, 1848
Bsp13I	TCCGGA	1 cut(s)	1924
Bsp1407I	TGTACA	1 cut(s)	802
Bsp143I	GATC	8 cut(s)	205, 229, 328, 365, 377, 412, 1092, 2017
BspACI	CCGC	5 cut(s)	880, 1038, 1823, 1910, 2130
BspANI	GGCC	4 cut(s)	883, 1862, 1886, 2037
BspCNI	CTCAG	8 cut(s)	31, 178, 301, 828, 839, 1357, 1521, 2107
BspEI	TCCGGA	1 cut(s)	1924
BspHI	TCATGA	1 cut(s)	193
BspLI	GGNNCC	4 cut(s)	538, 539, 1347, 1829
BspMAI	CTGCAG	2 cut(s)	346, 1611
BspMI	ACCTGC	1 cut(s)	1369
BspOI	GCTAGC	1 cut(s)	795
BspPI	GGATC	3 cut(s)	200, 373, 420
BspT107I	GGYRCC	1 cut(s)	1827
BspTNI	GGTCTC	1 cut(s)	1443
BsrDI	GCAATG	1 cut(s)	401
BsrFI	RCCGGY	1 cut(s)	1461
BsrGI	TGTACA	1 cut(s)	802
BsrI	ACTGG	1 cut(s)	130
BssAI	RCCGGY	1 cut(s)	1461
BssECI	CCNNGG	2 cut(s)	1835, 2156
BssMI	GATC	8 cut(s)	205, 229, 328, 365, 377, 412, 1092, 2017
BssNI	GRCGYC	1 cut(s)	1417
BssSI	CACGAG	1 cut(s)	1872
BssT1I	CCWWGG	1 cut(s)	2156
Bst2BI	CACGAG	1 cut(s)	1872
Bst2UI	CCWGG	1 cut(s)	11
Bst4CI	ACNGT	7 cut(s)	323, 738, 759, 1080, 1624, 1693, 1804
Bst6I	CTCTTC	3 cut(s)	329, 1761, 2095
BstACI	GRCGYC	1 cut(s)	1417
BstAPI	GCANNNNNTGC	2 cut(s)	1598, 1820
BstAUI	TGTACA	1 cut(s)	802
BstC8I	GCNNGC	3 cut(s)	793, 1257, 1463
BstDSI	CCRYGG	1 cut(s)	1835
BstF5I	GGATG	6 cut(s)	155, 1162, 1294, 1519, 1549, 1936
BstHHI	GCGC	1 cut(s)	555
BstKTI	GATC	8 cut(s)	208, 232, 331, 368, 380, 415, 1095, 2020
BstMAI	GTCTC	6 cut(s)	761, 818, 1408, 1443, 1682, 1991
BstMBI	GATC	8 cut(s)	205, 229, 328, 365, 377, 412, 1092, 2017
BstMCI	CGRYCG	1 cut(s)	740
BstNI	CCWGG	1 cut(s)	11
BstNSI	RCATGY	4 cut(s)	967, 1752, 1795, 1844
BstSCI	CCNGG	1 cut(s)	9
BstSFI	CTRYAG	3 cut(s)	342, 1395, 1607
BstSLI	GKGCMC	1 cut(s)	1848
BstV1I	GCAGC	6 cut(s)	800, 1339, 1593, 1621, 1786, 1789
BstV2I	GAAGAC	3 cut(s)	7, 536, 753
BstX2I	RGATCY	2 cut(s)	205, 377
BstXI	CCANNNNNNTGG	1 cut(s)	656
BstYI	RGATCY	2 cut(s)	205, 377
BsuRI	GGCC	4 cut(s)	883, 1862, 1886, 2037
BtgI	CCRYGG	1 cut(s)	1835
BtsCI	GGATG	6 cut(s)	155, 1162, 1294, 1519, 1549, 1936
BtsIMutI	CAGTG	2 cut(s)	834, 1800
BveI	ACCTGC	1 cut(s)	1369
Cac8I	GCNNGC	3 cut(s)	793, 1257, 1463
CaiI	CAGNNNCTG	2 cut(s)	776, 1780
CciI	TCATGA	1 cut(s)	193
CfoI	GCGC	1 cut(s)	555
Cfr10I	RCCGGY	1 cut(s)	1461
Cfr13I	GGNCC	4 cut(s)	500, 537, 1358, 1884
CseI	GACGC	1 cut(s)	1425
CsiI	ACCWGGT	1 cut(s)	9
Csp6I	GTAC	4 cut(s)	734, 803, 1223, 1828
CviAII	CATG	9 cut(s)	62, 194, 964, 1153, 1375, 1749, 1792, 1841, 2047
CviQI	GTAC	4 cut(s)	734, 803, 1223, 1828
DpnI	GATC	8 cut(s)	207, 231, 330, 367, 379, 414, 1094, 2019
DpnII	GATC	8 cut(s)	205, 229, 328, 365, 377, 412, 1092, 2017
EaeI	YGGCCR	2 cut(s)	1860, 2035
Eam1104I	CTCTTC	3 cut(s)	329, 1761, 2095
EarI	CTCTTC	3 cut(s)	329, 1761, 2095
Ecl136II	GAGCTC	2 cut(s)	76, 1210
Eco130I	CCWWGG	1 cut(s)	2156
Eco24I	GRGCYC	2 cut(s)	78, 1212
Eco31I	GGTCTC	1 cut(s)	1443
Eco32I	GATATC	1 cut(s)	36
Eco47I	GGWCC	3 cut(s)	500, 537, 1358
Eco53kI	GAGCTC	2 cut(s)	76, 1210
Eco57I	CTGAAG	6 cut(s)	240, 353, 381, 1409, 1742, 2007
EcoICRI	GAGCTC	2 cut(s)	76, 1210
EcoO109I	RGGNCCY	2 cut(s)	537, 1884
EcoRII	CCWGG	1 cut(s)	9
EcoRV	GATATC	1 cut(s)	36
EcoT14I	CCWWGG	1 cut(s)	2156
EcoT38I	GRGCYC	2 cut(s)	78, 1212
ErhI	CCWWGG	1 cut(s)	2156
Esp3I	CGTCTC	1 cut(s)	1408
FaeI	CATG	9 cut(s)	65, 197, 967, 1156, 1378, 1752, 1795, 1844, 2050
FalI	AAGNNNNNCTT	4 cut(s)	90, 122, 390, 422
FaqI	GGGAC	3 cut(s)	309, 523, 1571
FatI	CATG	9 cut(s)	61, 193, 963, 1152, 1374, 1748, 1791, 1840, 2046
FauI	CCCGC	2 cut(s)	1031, 1816
FbaI	TGATCA	2 cut(s)	229, 1092
FblI	GTMKAC	1 cut(s)	2111
Fnu4HI	GCNGC	7 cut(s)	789, 881, 1328, 1607, 1610, 1775, 1778
FokI	GGATG	6 cut(s)	162, 1169, 1301, 1526, 1556, 1943
FriOI	GRGCYC	2 cut(s)	78, 1212
Fsp4HI	GCNGC	7 cut(s)	789, 881, 1328, 1607, 1610, 1775, 1778
FspBI	CTAG	8 cut(s)	162, 419, 432, 792, 810, 924, 1380, 1677
GlaI	GCGC	1 cut(s)	554
GluI	GCNGC	7 cut(s)	789, 881, 1328, 1607, 1610, 1775, 1778
HaeIII	GGCC	4 cut(s)	883, 1862, 1886, 2037
HapII	CCGG	2 cut(s)	1462, 1925
HgaI	GACGC	1 cut(s)	1425
HhaI	GCGC	1 cut(s)	555
Hin1I	GRCGYC	1 cut(s)	1417
Hin1II	CATG	9 cut(s)	65, 197, 967, 1156, 1378, 1752, 1795, 1844, 2050
Hin6I	GCGC	1 cut(s)	553
HinP1I	GCGC	1 cut(s)	553
HincII	GTYRAC	2 cut(s)	1083, 2011
HindII	GTYRAC	2 cut(s)	1083, 2011
HindIII	AAGCTT	1 cut(s)	488
HpaII	CCGG	2 cut(s)	1462, 1925
HphI	GGTGA	4 cut(s)	683, 754, 966, 2153
Hpy166II	GTNNAC	8 cut(s)	803, 1005, 1083, 1358, 1846, 2011, 2112, 2144
Hpy8I	GTNNAC	8 cut(s)	803, 1005, 1083, 1358, 1846, 2011, 2112, 2144
Hpy99I	CGWCG	5 cut(s)	2066, 2069, 2072, 2075, 2078
HpyAV	CCTTC	7 cut(s)	140, 356, 460, 582, 1490, 1584, 1982
HpyCH4III	ACNGT	7 cut(s)	323, 738, 759, 1080, 1624, 1693, 1804
HpyCH4IV	ACGT	3 cut(s)	258, 1010, 1816
HpySE526I	ACGT	3 cut(s)	258, 1010, 1816
Hsp92I	GRCGYC	1 cut(s)	1417
Hsp92II	CATG	9 cut(s)	65, 197, 967, 1156, 1378, 1752, 1795, 1844, 2050
HspAI	GCGC	1 cut(s)	553
KflI	GGGWCCC	1 cut(s)	537
Kpn2I	TCCGGA	1 cut(s)	1924
KpnI	GGTACC	1 cut(s)	1831
KroI	GCCGGC	1 cut(s)	1461
KroNI	GCCGGC	1 cut(s)	1463
Ksp22I	TGATCA	2 cut(s)	229, 1092
Kzo9I	GATC	8 cut(s)	205, 229, 328, 365, 377, 412, 1092, 2017
LmnI	GCTCC	2 cut(s)	58, 81
Lsp1109I	GCAGC	6 cut(s)	800, 1339, 1593, 1621, 1786, 1789
LweI	GCATC	4 cut(s)	295, 1147, 1504, 1865
MabI	ACCWGGT	1 cut(s)	9
MaeI	CTAG	8 cut(s)	162, 419, 432, 792, 810, 924, 1380, 1677
MaeII	ACGT	3 cut(s)	258, 1010, 1816
MalI	GATC	8 cut(s)	207, 231, 330, 367, 379, 414, 1094, 2019
MboI	GATC	8 cut(s)	205, 229, 328, 365, 377, 412, 1092, 2017
MflI	RGATCY	2 cut(s)	205, 377
MhlI	GDGCHC	3 cut(s)	78, 1212, 1848
MlyI	GAGTC	5 cut(s)	1309, 1553, 2081, 2117, 2126
MroI	TCCGGA	1 cut(s)	1924
MroNI	GCCGGC	1 cut(s)	1461
MseI	TTAA	5 cut(s)	24, 473, 482, 863, 1167
MspA1I	CMGCKG	1 cut(s)	1780
MspI	CCGG	2 cut(s)	1462, 1925
MspR9I	CCNGG	1 cut(s)	11
Mva1269I	GAATGC	2 cut(s)	757, 1429
MvaI	CCWGG	1 cut(s)	11
NaeI	GCCGGC	1 cut(s)	1463
NdeII	GATC	8 cut(s)	205, 229, 328, 365, 377, 412, 1092, 2017
NgoMIV	GCCGGC	1 cut(s)	1461
NheI	GCTAGC	1 cut(s)	791
NlaIII	CATG	9 cut(s)	65, 197, 967, 1156, 1378, 1752, 1795, 1844, 2050
NlaIV	GGNNCC	4 cut(s)	538, 539, 1347, 1829
NspI	RCATGY	4 cut(s)	967, 1752, 1795, 1844
PagI	TCATGA	1 cut(s)	193
PciI	ACATGT	1 cut(s)	1748
PcsI	WCGNNNNNNNCGW	4 cut(s)	2040, 2067, 2070, 2073
PctI	GAATGC	2 cut(s)	757, 1429
PdiI	GCCGGC	1 cut(s)	1463
PfeI	GAWTC	9 cut(s)	4, 103, 154, 190, 1181, 1244, 1783, 2051, 2081
PflMI	CCANNNNNTGG	1 cut(s)	1355
PkrI	GCNGC	7 cut(s)	790, 882, 1329, 1608, 1611, 1776, 1779
PleI	GAGTC	5 cut(s)	1309, 1553, 2081, 2116, 2125
PpsI	GAGTC	5 cut(s)	1309, 1553, 2081, 2116, 2125
PpuMI	RGGWCCY	1 cut(s)	537
PscI	ACATGT	1 cut(s)	1748
PshBI	ATTAAT	1 cut(s)	863
PsiI	TTATAA	1 cut(s)	446
Psp124BI	GAGCTC	2 cut(s)	78, 1212
Psp5II	RGGWCCY	1 cut(s)	537
Psp6I	CCWGG	1 cut(s)	9
PspGI	CCWGG	1 cut(s)	9
PspN4I	GGNNCC	4 cut(s)	538, 539, 1347, 1829
PspPI	GGNCC	4 cut(s)	500, 537, 1358, 1884
PspPPI	RGGWCCY	1 cut(s)	537
PstI	CTGCAG	2 cut(s)	346, 1611
PstNI	CAGNNNCTG	2 cut(s)	776, 1780
PsuI	RGATCY	2 cut(s)	205, 377
PvuII	CAGCTG	1 cut(s)	1780
RsaI	GTAC	4 cut(s)	735, 804, 1224, 1829
RsaNI	GTAC	4 cut(s)	734, 803, 1223, 1828
SacI	GAGCTC	2 cut(s)	78, 1212
SaqAI	TTAA	5 cut(s)	24, 473, 482, 863, 1167
SatI	GCNGC	7 cut(s)	789, 881, 1328, 1607, 1610, 1775, 1778
Sau3AI	GATC	8 cut(s)	205, 229, 328, 365, 377, 412, 1092, 2017
Sau96I	GGNCC	4 cut(s)	500, 537, 1358, 1884
SchI	GAGTC	5 cut(s)	1309, 1553, 2081, 2117, 2126
ScrFI	CCNGG	1 cut(s)	11
SduI	GDGCHC	3 cut(s)	78, 1212, 1848
SexAI	ACCWGGT	1 cut(s)	9
SfaNI	GCATC	4 cut(s)	295, 1147, 1504, 1865
SfcI	CTRYAG	3 cut(s)	342, 1395, 1607
SinI	GGWCC	3 cut(s)	500, 537, 1358
SmlI	CTYRAG	4 cut(s)	96, 407, 1211, 1474
SmoI	CTYRAG	4 cut(s)	96, 407, 1211, 1474
SsiI	CCGC	5 cut(s)	880, 1038, 1823, 1910, 2130
SspMI	CTAG	8 cut(s)	162, 419, 432, 792, 810, 924, 1380, 1677
SstI	GAGCTC	2 cut(s)	78, 1212
StyD4I	CCNGG	1 cut(s)	9
StyI	CCWWGG	1 cut(s)	2156
TaaI	ACNGT	7 cut(s)	323, 738, 759, 1080, 1624, 1693, 1804
TaiI	ACGT	3 cut(s)	261, 1013, 1819
TaqI	TCGA	5 cut(s)	423, 456, 857, 1032, 1490
TatI	WGTACW	1 cut(s)	802
TauI	GCSGC	1 cut(s)	883
TfiI	GAWTC	9 cut(s)	4, 103, 154, 190, 1181, 1244, 1783, 2051, 2081
Tru1I	TTAA	5 cut(s)	24, 473, 482, 863, 1167
Tru9I	TTAA	5 cut(s)	24, 473, 482, 863, 1167
TscAI	CASTG	2 cut(s)	834, 1807
TseI	GCWGC	6 cut(s)	788, 1327, 1606, 1609, 1774, 1777
TspGWI	ACGGA	3 cut(s)	125, 492, 1700
TspRI	CASTG	2 cut(s)	834, 1807
Van91I	CCANNNNNTGG	1 cut(s)	1355
VneI	GTGCAC	1 cut(s)	1844
VpaK11BI	GGWCC	3 cut(s)	500, 537, 1358
VspI	ATTAAT	1 cut(s)	863
XapI	RAATTY	5 cut(s)	181, 527, 929, 1665, 2161
XceI	RCATGY	4 cut(s)	967, 1752, 1795, 1844
XmiI	GTMKAC	1 cut(s)	2111
XspI	CTAG	8 cut(s)	162, 419, 432, 792, 810, 924, 1380, 1677

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.