Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0009278

Physical Location & Seq

Genomic Coordinates Forward (+)

14440139 .. 14444936

Gene Structure 4798 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG155500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2331 bp

ATGGAGAGCAGCGAAGAAGAAGAGGACTTCCCATCATTAGAGAGCATCACTCCCCAGTCCAAAGTCGACTCTCTTTACCAATCCCACACCGAAAAGGGAATTAGAAAGCTATGTTGCGAGCTCCTAGATTTAAAGGATGCAGTGGAGAACTTATGTGGAGATGTGCGAACCAAATACCTGGCTTTTCTGAGGATATCTGAGGAGGCTGTTGAAATGGAGCATGAGTTGGTTGAGCTCCGAAAGCACATTTCATCTCAAGGGATACTTGTGCAGGATTTGATGACTGGTGTATTCCGTGAATTGGAAGGATGGAATCAATCTAGTAGTGATGTTCAGAAAAATTCTGAGATTCCTGAACTTCAAGATCCCTTGCCAACTGAAGCAGATGTTCACAAGATATTTTTGGACAAAATTGATGTTCTCTTAGCTGAACATAAAGTGGAAGAAGCGTTAGAGGCTTTAGATGCTGAGGAGAGAAACTCTCCCGATCTGAAGAGTTCTGCAGATACTTCATCAATTGAAGGATCAACATACAGATCTGTTTTCTTGAAAAGAAAAGCATTGCTTGAGGATCAGCTAGTCGAGATTACTACACAACCTTTTATAAGTTTTGTCGAGTTGCAGAAGGCTTTAATGGGGTTAATGAAGCTTGGAAAAGGTCCGTTGGCACATCAGTTACTGCTGAAATTTTATGGATCCCGTCTTCAAAAGCGCATTGAGGCTCTATTTCCTTCTTGCTCTGTATGCCCTAAGACATATCCAGCAACATTATCCAAGCTCGTTTTTTCTATAATTTCATCAGCAACCCAGAAATCTGGTTTGATTTTTGGTGATAATCCTGTTTATACAAACAGAGTTGTTCAATGGGCAGAGTGGGAAATTGAATACTTTGTACGGTCGGTGAAAGAGAATGCACCGTCTTCGGAGACAGCTTCTGCTTTAGGTGCAGCTAGCATTTGTGTGCAGGCTAGTCTCAGCTACTCCTCAGTGCTGGAAAGGCAAGGTCTGAAATTGTCGAAATTAATTTTGGTACTGTTGCGGCCTTTCATTGAAGAAGTTTTAGAGTTGAACTTTAGACGGGCTAGAAAATTTGTTCTTGACTTGGTGGTTGCTGATGAGTGCATGTCATTTTCACCTCGCTTTGCACCTCCATTGTCTGCGTTTACAACATCATCAGAGGGTGTTCTTGTCGATAGCGGGATAAGATTTATGTGCATTATTGAAGATATATTGGAACAGTTGACCCCTATGATCATTTTGCATTTTGGGGCAAACATATTGAGCAGGATTGGAACTCTTTTTGATAAATACATGGATGCTTTAATTAAAGCCCTGCCAGAATCATCTGATGATGACACTCTTACAGAGCTCAAGGAGTTTGTACCCTTTCGAGCTGAAACAGATTCAGAACAGCTTGCCATTTTGGGAGTTGCATTTACCATTGTGGATGAACTACTACCCAATGCTGTAATGACCCTTTGGAAGCAGCAGAGTGAAAGTGTGGAACCAAAAAGTGGACCTGCTGAGAATGTCATGTCTAGTCCAAGCACTTCTACAGAGTTCAAGGATTGGAGACGCCATCTTCAGCATTCATTTGACAAGCTAAGAGACCATTTCTGCCGGCAATATGTCTTGAGCTTCATCTATTCGAGAGAAGGGAAAACACGATTGGATGCACAAATATATCTAAGTGAGAACGGGGATGATTTGTATTGGGACTCTGACCCTTTGCCTTCGCTTCCATTTCAGGCATTATTTGCAAAGCTGCAGCAATTAGCAACTGTGGCAGGAGATGTATTACTTGGAAAAGAGAAAATACAGAAAATTTTACTTGCTAGGCTAACGGAGACTGTTCTAATGTGGTTGTCTGATGAACAAGAGTTTTGGAGTGTCTTTGAGAATGATACATGTCCTCTTCAGCCATTTGGGTTGCAGCAGCTGATTCTTGACATGCACTTCACTGTGGAAATTGCACGTTTTGCGGGTTACCCACCACGGCATGTGCACCAAATTGCATCGGCCATAATTGCTCGTGCTATCAGGGCCTTTTCTGCAAAAGGGATAGAACCACAAACTGCACTTCCGGAGGATGAGTGGTTTGTTGAAACTGCAAAATCATCAATAAACAAGCTACTTTTGGGAACAGAAGGGTCAGAGACATCGGAAGTTGACCAAGATCACATCAATCTACACGGCCATATCGTCATGGATTCAGAGGACGACGATGACGATGATGATTCTGACTCATCCCTCTCATCGGTAGAGTCTACTGAGTCTTTTGCTTCCGCAAGTATGGGTGAACTTGATAGTCCAAGGAATTTTGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0001927 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0007154 GO:0008037 GO:0008104 GO:0008150 GO:0009856 GO:0009875 GO:0009987 GO:0016043 GO:0016192 GO:0022406 GO:0022414 GO:0022607 GO:0031503 GO:0032501 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0034629 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0046903 GO:0048278 GO:0048544 GO:0051179 GO:0051234 GO:0051601 GO:0051640 GO:0051641 GO:0051704 GO:0060321 GO:0065003 GO:0070727 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo84_C

Protein Analysis

776

Amino Acids

87.18

Weight (kDa)

4.66

Isoelectric Point (pI)

56.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo84_C	PF16528	135 - 338	6.3e-09	Exocyst component 84 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009278)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10180
fragaria_vesca	FvH4_3g12130 FvH4_3g12130 FvH4_3g12130
malus_domestica	MD05G1254700.v1.1 MD10G1234800.v1.1
prunus_persica	Prupe.4G110000_v2.0.a1 Prupe.4G110000_v2.0.a1
pyrus_communis	pycom05g23270 pycom10g19660
rosa_chinensis	RchiOBHm_Chr5g0019861
rosa_laevigata	RLG00000032479
rosa_multiflora	Rmu_co8414241.1_g000001
rosa_roxburghii	Rroxscaffold_1G00058310
rosa_rugosa	Rorug05G0054300 Rorug05G0054400 Rorug05G0054500.1
rosa_samantha	Rh5AG144700 Rh5BG143800 Rh5CG155500 Rh5DG143600
rosa_wichuraiana	Rw5G012780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	605
Acc36I	ACCTGC	1 cut(s)	1528
AccB7I	CCANNNNNTGG	1 cut(s)	1514
AccI	GTMKAC	2 cut(s)	66, 2267
AccIII	TCCGGA	1 cut(s)	2083
AciI	CCGC	4 cut(s)	1039, 1197, 1982, 2286
AclWI	GGATC	5 cut(s)	359, 532, 579, 690, 703
AcoI	YGGCCR	2 cut(s)	2019, 2194
AcsI	RAATTY	5 cut(s)	340, 686, 1088, 1824, 2317
AcuI	CTGAAG	4 cut(s)	399, 512, 1568, 1901
AcyI	GRCGYC	1 cut(s)	1576
AfaI	GTAC	3 cut(s)	894, 1032, 1383
AfiI	CCNNNNNNNGG	3 cut(s)	301, 1514, 2257
AflIII	ACRYGT	1 cut(s)	1907
AjnI	CCWGG	1 cut(s)	177
AjuI	GAANNNNNNNTTGG	4 cut(s)	1010, 1042, 1652, 1684
Alw21I	GWGCWC	4 cut(s)	123, 237, 1371, 2007
Alw26I	GTCTC	6 cut(s)	920, 977, 1567, 1602, 1841, 2150
Alw44I	GTGCAC	1 cut(s)	2003
AlwI	GGATC	5 cut(s)	359, 532, 579, 690, 703
AlwNI	CAGNNNCTG	3 cut(s)	679, 935, 1939
Aor13HI	TCCGGA	1 cut(s)	2083
AoxI	GGCC	4 cut(s)	1040, 2019, 2043, 2194
ApaLI	GTGCAC	1 cut(s)	2003
ApeKI	GCWGC	7 cut(s)	9, 947, 1486, 1765, 1768, 1933, 1936
ApoI	RAATTY	5 cut(s)	340, 686, 1088, 1824, 2317
AseI	ATTAAT	1 cut(s)	1022
AspLEI	GCGC	1 cut(s)	714
AspS9I	GGNCC	3 cut(s)	659, 1517, 2043
AsuHPI	GGTGA	4 cut(s)	842, 913, 1125, 2309
AsuNHI	GCTAGC	1 cut(s)	950
AvaII	GGWCC	2 cut(s)	659, 1517
BaeGI	GKGCMC	1 cut(s)	2007
BamHI	GGATCC	1 cut(s)	695
BanII	GRGCYC	3 cut(s)	123, 237, 1371
BauI	CACGAG	1 cut(s)	2031
BbsI	GAAGAC	2 cut(s)	695, 912
Bbv12I	GWGCWC	4 cut(s)	123, 237, 1371, 2007
BbvCI	CCTCAGC	1 cut(s)	468
BbvI	GCAGC	7 cut(s)	21, 959, 1498, 1752, 1780, 1945, 1948
BccI	CCATC	3 cut(s)	40, 303, 1587
BceAI	ACGGC	2 cut(s)	2012, 2209
BcgI	CGANNNNNNTGC	2 cut(s)	903, 937
BciT130I	CCWGG	1 cut(s)	179
BciVI	GTATCC	1 cut(s)	255
BclI	TGATCA	1 cut(s)	1251
BcoDI	GTCTC	6 cut(s)	920, 977, 1567, 1602, 1841, 2150
BfaI	CTAG	8 cut(s)	125, 321, 578, 951, 969, 1083, 1539, 1836
BfmI	CTRYAG	3 cut(s)	501, 1554, 1766
BfuAI	ACCTGC	1 cut(s)	1528
BfuI	GTATCC	1 cut(s)	255
BglII	AGATCT	1 cut(s)	536
BisI	GCNGC	8 cut(s)	10, 948, 1040, 1487, 1766, 1769, 1934, 1937
BlsI	GCNGC	8 cut(s)	11, 949, 1041, 1488, 1767, 1770, 1935, 1938
Bme1390I	CCNGG	1 cut(s)	179
Bme18I	GGWCC	2 cut(s)	659, 1517
BmgT120I	GGNCC	3 cut(s)	659, 1517, 2043
BmiI	GGNNCC	2 cut(s)	697, 1506
BmrFI	CCNGG	1 cut(s)	179
BmrI	ACTGGG	1 cut(s)	49
BmsI	GCATC	6 cut(s)	54, 127, 454, 1306, 1663, 2024
BmtI	GCTAGC	1 cut(s)	954
BmuI	ACTGGG	1 cut(s)	49
BpiI	GAAGAC	2 cut(s)	695, 912
BplI	GAGNNNNNCTC	6 cut(s)	34, 66, 464, 496, 466, 498
Bpu10I	CCTNAGC	1 cut(s)	468
BpuEI	CTTGAG	4 cut(s)	240, 587, 1355, 1654
BsaHI	GRCGYC	1 cut(s)	1576
BsaI	GGTCTC	1 cut(s)	1602
BsaJI	CCNNGG	2 cut(s)	1994, 2312
BsaWI	WCCGGW	1 cut(s)	2083
BsaXI	ACNNNNNCTCC	4 cut(s)	209, 239, 2078, 2108
Bsc4I	CCNNNNNNNGG	3 cut(s)	301, 1514, 2257
Bse118I	RCCGGY	1 cut(s)	1620
Bse1I	ACTGG	2 cut(s)	55, 289
Bse3DI	GCAATG	1 cut(s)	560
BseAI	TCCGGA	1 cut(s)	2083
BseBI	CCWGG	1 cut(s)	179
BseDI	CCNNGG	2 cut(s)	1994, 2312
BseGI	GGATG	8 cut(s)	142, 314, 1321, 1453, 1678, 1708, 2095, 2246
BseLI	CCNNNNNNNGG	3 cut(s)	301, 1514, 2257
BseMI	GCAATG	1 cut(s)	560
BseMII	CTCAG	8 cut(s)	179, 189, 336, 459, 988, 999, 1515, 2262
BseNI	ACTGG	2 cut(s)	55, 289
BseRI	GAGGAG	3 cut(s)	215, 485, 973
BseSI	GKGCMC	1 cut(s)	2007
BseXI	GCAGC	7 cut(s)	21, 959, 1498, 1752, 1780, 1945, 1948
BsgI	GTGCAG	4 cut(s)	290, 966, 983, 2061
Bsh1285I	CGRYCG	1 cut(s)	899
BshFI	GGCC	4 cut(s)	1042, 2021, 2045, 2196
BsiEI	CGRYCG	1 cut(s)	899
BsiHKAI	GWGCWC	4 cut(s)	123, 237, 1371, 2007
BsiSI	CCGG	2 cut(s)	1621, 2084
BslFI	GGGAC	1 cut(s)	1730
BslI	CCNNNNNNNGG	3 cut(s)	301, 1514, 2257
BsmAI	GTCTC	6 cut(s)	920, 977, 1567, 1602, 1841, 2150
BsmBI	CGTCTC	1 cut(s)	1567
BsmFI	GGGAC	1 cut(s)	1730
BsmI	GAATGC	2 cut(s)	916, 1588
BsnI	GGCC	4 cut(s)	1042, 2021, 2045, 2196
Bso31I	GGTCTC	1 cut(s)	1602
Bsp1286I	GDGCHC	4 cut(s)	123, 237, 1371, 2007
Bsp13I	TCCGGA	1 cut(s)	2083
Bsp143I	GATC	8 cut(s)	364, 487, 524, 536, 571, 695, 1251, 2176
BspACI	CCGC	4 cut(s)	1039, 1197, 1982, 2286
BspANI	GGCC	4 cut(s)	1042, 2021, 2045, 2196
BspCNI	CTCAG	8 cut(s)	180, 190, 337, 460, 987, 998, 1516, 2263
BspEI	TCCGGA	1 cut(s)	2083
BspLI	GGNNCC	2 cut(s)	697, 1506
BspMAI	CTGCAG	2 cut(s)	505, 1770
BspMI	ACCTGC	1 cut(s)	1528
BspOI	GCTAGC	1 cut(s)	954
BspPI	GGATC	5 cut(s)	359, 532, 579, 690, 703
BspTNI	GGTCTC	1 cut(s)	1602
BsrDI	GCAATG	1 cut(s)	560
BsrFI	RCCGGY	1 cut(s)	1620
BsrI	ACTGG	2 cut(s)	55, 289
BssAI	RCCGGY	1 cut(s)	1620
BssECI	CCNNGG	2 cut(s)	1994, 2312
BssMI	GATC	8 cut(s)	364, 487, 524, 536, 571, 695, 1251, 2176
BssNI	GRCGYC	1 cut(s)	1576
BssSI	CACGAG	1 cut(s)	2031
BssT1I	CCWWGG	1 cut(s)	2312
Bst2BI	CACGAG	1 cut(s)	2031
Bst2UI	CCWGG	1 cut(s)	179
Bst4CI	ACNGT	7 cut(s)	897, 918, 1035, 1239, 1783, 1852, 1963
Bst6I	CTCTTC	3 cut(s)	15, 488, 1920
BstACI	GRCGYC	1 cut(s)	1576
BstAPI	GCANNNNNTGC	2 cut(s)	1757, 1979
BstC8I	GCNNGC	5 cut(s)	119, 952, 966, 1416, 1622
BstDSI	CCRYGG	1 cut(s)	1994
BstEII	GGTNACC	1 cut(s)	1985
BstF5I	GGATG	8 cut(s)	142, 314, 1321, 1453, 1678, 1708, 2095, 2246
BstHHI	GCGC	1 cut(s)	714
BstKTI	GATC	8 cut(s)	367, 490, 527, 539, 574, 698, 1254, 2179
BstMAI	GTCTC	6 cut(s)	920, 977, 1567, 1602, 1841, 2150
BstMBI	GATC	8 cut(s)	364, 487, 524, 536, 571, 695, 1251, 2176
BstMCI	CGRYCG	1 cut(s)	899
BstNI	CCWGG	1 cut(s)	179
BstNSI	RCATGY	4 cut(s)	1126, 1911, 1954, 2003
BstPI	GGTNACC	1 cut(s)	1985
BstSCI	CCNGG	1 cut(s)	177
BstSFI	CTRYAG	3 cut(s)	501, 1554, 1766
BstSLI	GKGCMC	1 cut(s)	2007
BstV1I	GCAGC	7 cut(s)	21, 959, 1498, 1752, 1780, 1945, 1948
BstV2I	GAAGAC	2 cut(s)	695, 912
BstX2I	RGATCY	3 cut(s)	364, 536, 695
BstXI	CCANNNNNNTGG	2 cut(s)	178, 815
BstYI	RGATCY	3 cut(s)	364, 536, 695
BsuI	GTATCC	1 cut(s)	255
BsuRI	GGCC	4 cut(s)	1042, 2021, 2045, 2196
BtgI	CCRYGG	1 cut(s)	1994
BtsCI	GGATG	8 cut(s)	142, 314, 1321, 1453, 1678, 1708, 2095, 2246
BtsI	GCAGTG	1 cut(s)	147
BtsIMutI	CAGTG	3 cut(s)	147, 993, 1959
BveI	ACCTGC	1 cut(s)	1528
Cac8I	GCNNGC	5 cut(s)	119, 952, 966, 1416, 1622
CaiI	CAGNNNCTG	3 cut(s)	679, 935, 1939
CfoI	GCGC	1 cut(s)	714
Cfr10I	RCCGGY	1 cut(s)	1620
Cfr13I	GGNCC	3 cut(s)	659, 1517, 2043
CseI	GACGC	1 cut(s)	1584
Csp6I	GTAC	3 cut(s)	893, 1031, 1382
CviAII	CATG	8 cut(s)	221, 1123, 1312, 1534, 1908, 1951, 2000, 2206
CviQI	GTAC	3 cut(s)	893, 1031, 1382
DpnI	GATC	8 cut(s)	366, 489, 526, 538, 573, 697, 1253, 2178
DpnII	GATC	8 cut(s)	364, 487, 524, 536, 571, 695, 1251, 2176
DraI	TTTAAA	1 cut(s)	132
EaeI	YGGCCR	2 cut(s)	2019, 2194
Eam1104I	CTCTTC	3 cut(s)	15, 488, 1920
EarI	CTCTTC	3 cut(s)	15, 488, 1920
Ecl136II	GAGCTC	3 cut(s)	121, 235, 1369
Eco130I	CCWWGG	1 cut(s)	2312
Eco24I	GRGCYC	3 cut(s)	123, 237, 1371
Eco31I	GGTCTC	1 cut(s)	1602
Eco32I	GATATC	1 cut(s)	195
Eco47I	GGWCC	2 cut(s)	659, 1517
Eco53kI	GAGCTC	3 cut(s)	121, 235, 1369
Eco57I	CTGAAG	4 cut(s)	399, 512, 1568, 1901
Eco91I	GGTNACC	1 cut(s)	1985
EcoICRI	GAGCTC	3 cut(s)	121, 235, 1369
EcoO109I	RGGNCCY	1 cut(s)	2043
EcoO65I	GGTNACC	1 cut(s)	1985
EcoRII	CCWGG	1 cut(s)	177
EcoRV	GATATC	1 cut(s)	195
EcoT14I	CCWWGG	1 cut(s)	2312
EcoT38I	GRGCYC	3 cut(s)	123, 237, 1371
ErhI	CCWWGG	1 cut(s)	2312
Esp3I	CGTCTC	1 cut(s)	1567
FaeI	CATG	8 cut(s)	224, 1126, 1315, 1537, 1911, 1954, 2003, 2209
FalI	AAGNNNNNCTT	4 cut(s)	249, 281, 549, 581
FaqI	GGGAC	1 cut(s)	1730
FatI	CATG	8 cut(s)	220, 1122, 1311, 1533, 1907, 1950, 1999, 2205
FauI	CCCGC	2 cut(s)	1190, 1975
FbaI	TGATCA	1 cut(s)	1251
FblI	GTMKAC	2 cut(s)	66, 2267
Fnu4HI	GCNGC	8 cut(s)	10, 948, 1040, 1487, 1766, 1769, 1934, 1937
FokI	GGATG	8 cut(s)	149, 321, 1328, 1460, 1685, 1715, 2102, 2233
FriOI	GRGCYC	3 cut(s)	123, 237, 1371
Fsp4HI	GCNGC	8 cut(s)	10, 948, 1040, 1487, 1766, 1769, 1934, 1937
FspBI	CTAG	8 cut(s)	125, 321, 578, 951, 969, 1083, 1539, 1836
GlaI	GCGC	1 cut(s)	713
GluI	GCNGC	8 cut(s)	10, 948, 1040, 1487, 1766, 1769, 1934, 1937
HaeIII	GGCC	4 cut(s)	1042, 2021, 2045, 2196
HapII	CCGG	2 cut(s)	1621, 2084
HgaI	GACGC	1 cut(s)	1584
HhaI	GCGC	1 cut(s)	714
Hin1I	GRCGYC	1 cut(s)	1576
Hin1II	CATG	8 cut(s)	224, 1126, 1315, 1537, 1911, 1954, 2003, 2209
Hin6I	GCGC	1 cut(s)	712
HinP1I	GCGC	1 cut(s)	712
HincII	GTYRAC	3 cut(s)	67, 1242, 2170
HindII	GTYRAC	3 cut(s)	67, 1242, 2170
HindIII	AAGCTT	1 cut(s)	647
HpaII	CCGG	2 cut(s)	1621, 2084
HphI	GGTGA	4 cut(s)	842, 913, 1125, 2309
Hpy166II	GTNNAC	9 cut(s)	67, 391, 1164, 1242, 1517, 2005, 2170, 2268, 2300
Hpy8I	GTNNAC	9 cut(s)	67, 391, 1164, 1242, 1517, 2005, 2170, 2268, 2300
Hpy99I	CGWCG	1 cut(s)	2225
HpyAV	CCTTC	7 cut(s)	299, 515, 619, 741, 1649, 1743, 2141
HpyCH4III	ACNGT	7 cut(s)	897, 918, 1035, 1239, 1783, 1852, 1963
HpyCH4IV	ACGT	1 cut(s)	1975
HpySE526I	ACGT	1 cut(s)	1975
Hsp92I	GRCGYC	1 cut(s)	1576
Hsp92II	CATG	8 cut(s)	224, 1126, 1315, 1537, 1911, 1954, 2003, 2209
HspAI	GCGC	1 cut(s)	712
Kpn2I	TCCGGA	1 cut(s)	2083
KroI	GCCGGC	1 cut(s)	1620
KroNI	GCCGGC	1 cut(s)	1622
Ksp22I	TGATCA	1 cut(s)	1251
Kzo9I	GATC	8 cut(s)	364, 487, 524, 536, 571, 695, 1251, 2176
LmnI	GCTCC	3 cut(s)	126, 217, 240
Lsp1109I	GCAGC	7 cut(s)	21, 959, 1498, 1752, 1780, 1945, 1948
LweI	GCATC	6 cut(s)	54, 127, 454, 1306, 1663, 2024
MaeI	CTAG	8 cut(s)	125, 321, 578, 951, 969, 1083, 1539, 1836
MaeII	ACGT	1 cut(s)	1975
MaeIII	GTNAC	2 cut(s)	675, 1985
MalI	GATC	8 cut(s)	366, 489, 526, 538, 573, 697, 1253, 2178
MboI	GATC	8 cut(s)	364, 487, 524, 536, 571, 695, 1251, 2176
MfeI	CAATTG	1 cut(s)	516
MflI	RGATCY	3 cut(s)	364, 536, 695
MhlI	GDGCHC	4 cut(s)	123, 237, 1371, 2007
MlyI	GAGTC	5 cut(s)	62, 1712, 2237, 2273, 2282
MroI	TCCGGA	1 cut(s)	2083
MroNI	GCCGGC	1 cut(s)	1620
MseI	TTAA	6 cut(s)	131, 632, 641, 1022, 1322, 1326
MslI	CAYNNNNRTG	1 cut(s)	959
MspA1I	CMGCKG	1 cut(s)	1939
MspI	CCGG	2 cut(s)	1621, 2084
MspR9I	CCNGG	1 cut(s)	179
MunI	CAATTG	1 cut(s)	516
Mva1269I	GAATGC	2 cut(s)	916, 1588
MvaI	CCWGG	1 cut(s)	179
NaeI	GCCGGC	1 cut(s)	1622
NdeII	GATC	8 cut(s)	364, 487, 524, 536, 571, 695, 1251, 2176
NgoMIV	GCCGGC	1 cut(s)	1620
NheI	GCTAGC	1 cut(s)	950
NlaIII	CATG	8 cut(s)	224, 1126, 1315, 1537, 1911, 1954, 2003, 2209
NlaIV	GGNNCC	2 cut(s)	697, 1506
NspI	RCATGY	4 cut(s)	1126, 1911, 1954, 2003
PacI	TTAATTAA	1 cut(s)	1326
PciI	ACATGT	1 cut(s)	1907
PcsI	WCGNNNNNNNCGW	2 cut(s)	2199, 2226
PctI	GAATGC	2 cut(s)	916, 1588
PdiI	GCCGGC	1 cut(s)	1622
PfeI	GAWTC	7 cut(s)	313, 349, 1340, 1403, 1942, 2210, 2237
PflMI	CCANNNNNTGG	1 cut(s)	1514
PkrI	GCNGC	8 cut(s)	11, 949, 1041, 1488, 1767, 1770, 1935, 1938
PleI	GAGTC	5 cut(s)	62, 1712, 2237, 2272, 2281
PpsI	GAGTC	5 cut(s)	62, 1712, 2237, 2272, 2281
PscI	ACATGT	1 cut(s)	1907
PshBI	ATTAAT	1 cut(s)	1022
PsiI	TTATAA	1 cut(s)	605
Psp124BI	GAGCTC	3 cut(s)	123, 237, 1371
Psp6I	CCWGG	1 cut(s)	177
PspEI	GGTNACC	1 cut(s)	1985
PspGI	CCWGG	1 cut(s)	177
PspN4I	GGNNCC	2 cut(s)	697, 1506
PspPI	GGNCC	3 cut(s)	659, 1517, 2043
PstI	CTGCAG	2 cut(s)	505, 1770
PstNI	CAGNNNCTG	3 cut(s)	679, 935, 1939
PsuI	RGATCY	3 cut(s)	364, 536, 695
PvuII	CAGCTG	1 cut(s)	1939
RsaI	GTAC	3 cut(s)	894, 1032, 1383
RsaNI	GTAC	3 cut(s)	893, 1031, 1382
RseI	CAYNNNNRTG	1 cut(s)	959
SacI	GAGCTC	3 cut(s)	123, 237, 1371
SalI	GTCGAC	1 cut(s)	65
SaqAI	TTAA	6 cut(s)	131, 632, 641, 1022, 1322, 1326
SatI	GCNGC	8 cut(s)	10, 948, 1040, 1487, 1766, 1769, 1934, 1937
Sau3AI	GATC	8 cut(s)	364, 487, 524, 536, 571, 695, 1251, 2176
Sau96I	GGNCC	3 cut(s)	659, 1517, 2043
SchI	GAGTC	5 cut(s)	62, 1712, 2237, 2273, 2282
ScrFI	CCNGG	1 cut(s)	179
SduI	GDGCHC	4 cut(s)	123, 237, 1371, 2007
SfaNI	GCATC	6 cut(s)	54, 127, 454, 1306, 1663, 2024
SfcI	CTRYAG	3 cut(s)	501, 1554, 1766
SinI	GGWCC	2 cut(s)	659, 1517
SmiMI	CAYNNNNRTG	1 cut(s)	959
SmlI	CTYRAG	4 cut(s)	255, 566, 1370, 1633
SmoI	CTYRAG	4 cut(s)	255, 566, 1370, 1633
SsiI	CCGC	4 cut(s)	1039, 1197, 1982, 2286
SspMI	CTAG	8 cut(s)	125, 321, 578, 951, 969, 1083, 1539, 1836
SstI	GAGCTC	3 cut(s)	123, 237, 1371
StyD4I	CCNGG	1 cut(s)	177
StyI	CCWWGG	1 cut(s)	2312
TaaI	ACNGT	7 cut(s)	897, 918, 1035, 1239, 1783, 1852, 1963
TaiI	ACGT	1 cut(s)	1978
TaqI	TCGA	7 cut(s)	66, 582, 615, 1016, 1191, 1390, 1649
TauI	GCSGC	1 cut(s)	1042
TfiI	GAWTC	7 cut(s)	313, 349, 1340, 1403, 1942, 2210, 2237
Tru1I	TTAA	6 cut(s)	131, 632, 641, 1022, 1322, 1326
Tru9I	TTAA	6 cut(s)	131, 632, 641, 1022, 1322, 1326
TscAI	CASTG	3 cut(s)	147, 993, 1966
TseI	GCWGC	7 cut(s)	9, 947, 1486, 1765, 1768, 1933, 1936
TspDTI	ATGAA	9 cut(s)	240, 501, 659, 786, 1036, 1464, 1581, 1630, 1887
TspGWI	ACGGA	3 cut(s)	284, 651, 1859
TspRI	CASTG	3 cut(s)	147, 993, 1966
Van91I	CCANNNNNTGG	1 cut(s)	1514
VneI	GTGCAC	1 cut(s)	2003
VpaK11BI	GGWCC	2 cut(s)	659, 1517
VspI	ATTAAT	1 cut(s)	1022
XapI	RAATTY	5 cut(s)	340, 686, 1088, 1824, 2317
XceI	RCATGY	4 cut(s)	1126, 1911, 1954, 2003
XmiI	GTMKAC	2 cut(s)	66, 2267
XspI	CTAG	8 cut(s)	125, 321, 578, 951, 969, 1083, 1539, 1836

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.