Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0009278

Physical Location & Seq

Genomic Coordinates Reverse (-)

80140868 .. 80145804

Gene Structure 4937 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00058310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2349 bp

ATGGAGAGCAGCGAAGAAGAGGAGGACTTCCCATCATTAGAGAGCATCACTCCTCAGTCCAAAGTCGACTCTCTTTACCAATCCCACGCCGAAAAGTTAAGTTTAGGGGTTCTTAAGGGTTGGTTACTGTTGGTTGTTAATTGTGATAGTCTTGTTGGTGCTGCTTCTGTTGTTATTGGAATTAGAAAGCTATGTTGTGAGCTCCTAGATTTAAAGGATGCAGTGGAGAACTTATGTGGAGATGTGCGAACCAAATACCTGGCTTTTCTGAGGATATCTGAGGAGGCTGTTGAAATGGAGCATGAGTTGGTTGAGCTCCGAAAGCACATTTCATCTCAAGGGATACTTGTGCAGGATTTGATGACTGGTGTATTCCGTGAATTGGAAGGATGGAATCAATCTAGTAGTGATGTTCAGAAAAATTCTGAGATTCGTGAACTTCAAGATCCCTTGCCAACTGAAGCAGATGATCACAAGATATTTTTGGACAAAATTGATGTTCTCTTAGCTGAACATAAAGTGGAAGAAGCGTTAGAAGCTTTAGATGCTGAGGAGAGAAACTCTCCCGATCTGAAGAGTTCTGCAGATACTTCATCAACTGAAGGATCAACATACAGATCTGTTTTCTTGAAAAGAAAAGCATTGCTTGAGGATCAGCTAGTCGAGATTACTACACAACCTTTTATAAGTTTTGTTGAGTTGCAGAAGGCTTTAATGGGGTTAATGAAGCTTGGAAAAGGTCCGTTGGCACATCAGTTACTGCTGAAATTTTATGGATCCCGTCTTCAAAAGCGCATTGAGGCTCTATTTCCTTCTTGCTCTGTATGCCCCAAGACATATCCAGCAACATTATCCAAGCTCGTTTTCTCTATAATTTCATCAGCGACCCAGAAATCTGGTTTAATTTTTGGTGATAATCCTGTTTATACAAACAGAGTTGTTCAATGGGCAGAGTGGGAAATTGAATACTTTGTACGGTCGGTGAAAGAGAATGCACCGTCTTCGGAGACAGCTTCTGCTTTAGGTGCAGCTAGCATTTGTGTGCAGGCTAGTCTCAGCTACTCCTCAGTGCTGGAAAGGCAAGGTCTGAAATTTTCTAAATTAATTTTGGTGCTGTTGCGGCCTTTCATTGAAGAAGTTTTAGAGTTGAACTTTAGACGGGCTAGAAAATTTGTTCTTGACTTGGTGGTAGCTGATGAGTGCATGTCTTTTTCACCTCGCTTTGCACCTCCATTGTCTGCGTTTACAACATCATCAGAGGGTGTTCTTGTCGATAGCGGGATAAGATTTATGTGCATTATTGAAGATATATTGGAACAGTTGACCCCTATGATCATTTTGCATTTTGGGGGAAACATATTGAGCAGGATTGGAACTCTTTTTGATAAATACATGGATGCTCTAATTAAAGCCCTGCCAGAATCATCAGATGATGACACTCTTACAGAGCTCAAGGAGTTTGTACCCTTTAGAGCTGAAACAGATTCAGAACAGCTTGCCATTTTGGGAGTTGCATTTACCATTGTGGATGAACTACTACCTAATGCTGTAATGAACCTTTGGAAGCGGCAGAATGAAAAGTTCAAGGATTGGAGACGCCATCTTCAGCATTCGTTTGACAAGCTAAGAGACCATTTCTGCCGGCAATATGTCTTGAGCTTCATCTATTCGAGAGAAGGGAAAACACGATTGGATGCACAAATATATCTAAGTGAGAACGGGGATGATTTGTATTGGGACTCTGACCCTTTGCCTTCGCTTCCATTTCAGGCATTATTTGCAAAGCTGCAGCAATTAGCAACTGTGGCAGGAGATGTATTACATGGAAAAGAGAAAATACAGAAAATTTTACTTGCTAGGCTAACGGAGACTGTTCTAATGTGGTTGTCTGATGAACAAGAGTTTTGGAGTGTCTTTGAGAATGATACATGTCCTCTTCAGCCATTTGGGTTACAGCAGCTGATTCTTGACATGCACTTCACTGTGGAAATTGCACGTTTTGCGGGTTACCCACCACGGCATGTGCACCAAATTGCATCGGCCATAATTGCTCGTGCTATCAGGGCCTTTTCTGCAAAAGGGATAGAACCACAAACTGCACTTCCGGAGGATGAGTGGTTTGTTGAAACTGCAAAATCATCAATAAACAAGCTACTTTTGGGAACAGAAGGGTCAGAGACATCGGAAGTTGACCAAGATCACATCAATCTACACGGCCATATCGTCATGGATTCAGATGACGACGACGATGATGATTCTGACTCTTCCCTCTCATCGGTAGAGTCTACTGAGTCTTTCGCTTCCGCAAGTATGGGTGAACTTGATAGTCCAAGGAATTTTGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000145 GO:0001927 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006810 GO:0006887 GO:0006904 GO:0007154 GO:0008037 GO:0008104 GO:0008150 GO:0009856 GO:0009875 GO:0009987 GO:0016043 GO:0016192 GO:0022406 GO:0022414 GO:0022607 GO:0031503 GO:0032501 GO:0032940 GO:0032991 GO:0033036 GO:0034613 GO:0034622 GO:0034629 GO:0043933 GO:0044085 GO:0044424 GO:0044444 GO:0044448 GO:0044464 GO:0044706 GO:0046903 GO:0048278 GO:0048544 GO:0051179 GO:0051234 GO:0051601 GO:0051640 GO:0051641 GO:0051704 GO:0060321 GO:0065003 GO:0070727 GO:0071840 GO:0071944 GO:0099023 GO:0099568 GO:0140029 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo84_C

Protein Analysis

782

Amino Acids

87.94

Weight (kDa)

4.75

Isoelectric Point (pI)

52.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Exo84_C	PF16528	162 - 365	3.3e-09	Exocyst component 84 C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009278)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10180
fragaria_vesca	FvH4_3g12130 FvH4_3g12130 FvH4_3g12130
malus_domestica	MD05G1254700.v1.1 MD10G1234800.v1.1
prunus_persica	Prupe.4G110000_v2.0.a1 Prupe.4G110000_v2.0.a1
pyrus_communis	pycom05g23270 pycom10g19660
rosa_chinensis	RchiOBHm_Chr5g0019861
rosa_laevigata	RLG00000032479
rosa_multiflora	Rmu_co8414241.1_g000001
rosa_roxburghii	Rroxscaffold_1G00058310
rosa_rugosa	Rorug05G0054300 Rorug05G0054400 Rorug05G0054500.1
rosa_samantha	Rh5AG144700 Rh5BG143800 Rh5CG155500 Rh5DG143600
rosa_wichuraiana	Rw5G012780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	686
AccI	GTMKAC	2 cut(s)	66, 2285
AccIII	TCCGGA	1 cut(s)	2104
AciI	CCGC	5 cut(s)	1120, 1278, 1567, 2003, 2304
AclWI	GGATC	5 cut(s)	440, 613, 660, 771, 784
AcoI	YGGCCR	2 cut(s)	2040, 2215
AcsI	RAATTY	6 cut(s)	421, 767, 1091, 1169, 1845, 2335
AcuI	CTGAAG	5 cut(s)	480, 593, 621, 1589, 1922
AcyI	GRCGYC	1 cut(s)	1597
AfaI	GTAC	2 cut(s)	975, 1464
AfiI	CCNNNNNNNGG	2 cut(s)	382, 2275
AflII	CTTAAG	1 cut(s)	113
AflIII	ACRYGT	1 cut(s)	1928
AjnI	CCWGG	1 cut(s)	258
AjuI	GAANNNNNNNTTGG	4 cut(s)	848, 880, 1673, 1705
Alw21I	GWGCWC	4 cut(s)	204, 318, 1452, 2028
Alw26I	GTCTC	6 cut(s)	1001, 1058, 1588, 1623, 1862, 2171
Alw44I	GTGCAC	1 cut(s)	2024
AlwI	GGATC	5 cut(s)	440, 613, 660, 771, 784
AlwNI	CAGNNNCTG	3 cut(s)	760, 1016, 1960
Aor13HI	TCCGGA	1 cut(s)	2104
AoxI	GGCC	4 cut(s)	1121, 2040, 2064, 2215
ApaLI	GTGCAC	1 cut(s)	2024
ApeKI	GCWGC	6 cut(s)	9, 161, 1028, 1786, 1789, 1957
ApoI	RAATTY	6 cut(s)	421, 767, 1091, 1169, 1845, 2335
AseI	ATTAAT	1 cut(s)	1103
AspLEI	GCGC	1 cut(s)	795
AspS9I	GGNCC	2 cut(s)	740, 2064
AsuHPI	GGTGA	4 cut(s)	923, 994, 1206, 2327
AsuNHI	GCTAGC	1 cut(s)	1031
AvaII	GGWCC	1 cut(s)	740
BaeGI	GKGCMC	1 cut(s)	2028
BamHI	GGATCC	1 cut(s)	776
BanII	GRGCYC	3 cut(s)	204, 318, 1452
BauI	CACGAG	1 cut(s)	2052
BbsI	GAAGAC	2 cut(s)	776, 993
Bbv12I	GWGCWC	4 cut(s)	204, 318, 1452, 2028
BbvCI	CCTCAGC	1 cut(s)	549
BbvI	GCAGC	6 cut(s)	21, 148, 1040, 1773, 1801, 1969
BccI	CCATC	3 cut(s)	40, 384, 1608
BceAI	ACGGC	2 cut(s)	2033, 2230
BcgI	CGANNNNNNTGC	2 cut(s)	984, 1018
BciT130I	CCWGG	1 cut(s)	260
BciVI	GTATCC	1 cut(s)	336
BclI	TGATCA	2 cut(s)	469, 1332
BcoDI	GTCTC	6 cut(s)	1001, 1058, 1588, 1623, 1862, 2171
BfaI	CTAG	7 cut(s)	206, 402, 659, 1032, 1050, 1164, 1857
BfmI	CTRYAG	2 cut(s)	582, 1787
BfrI	CTTAAG	1 cut(s)	113
BfuI	GTATCC	1 cut(s)	336
BglII	AGATCT	1 cut(s)	617
BisI	GCNGC	8 cut(s)	10, 162, 1029, 1121, 1568, 1787, 1790, 1958
BlsI	GCNGC	8 cut(s)	11, 163, 1030, 1122, 1569, 1788, 1791, 1959
Bme1390I	CCNGG	1 cut(s)	260
Bme18I	GGWCC	1 cut(s)	740
BmgT120I	GGNCC	2 cut(s)	740, 2064
BmiI	GGNNCC	1 cut(s)	778
BmrFI	CCNGG	1 cut(s)	260
BmsI	GCATC	6 cut(s)	54, 208, 535, 1387, 1684, 2045
BmtI	GCTAGC	1 cut(s)	1035
BpiI	GAAGAC	2 cut(s)	776, 993
BplI	GAGNNNNNCTC	6 cut(s)	34, 66, 545, 577, 547, 579
Bpu10I	CCTNAGC	1 cut(s)	549
BpuEI	CTTGAG	4 cut(s)	321, 668, 1436, 1675
BsaHI	GRCGYC	1 cut(s)	1597
BsaI	GGTCTC	1 cut(s)	1623
BsaJI	CCNNGG	2 cut(s)	2015, 2330
BsaWI	WCCGGW	1 cut(s)	2104
BsaXI	ACNNNNNCTCC	4 cut(s)	290, 320, 2099, 2129
Bsc4I	CCNNNNNNNGG	2 cut(s)	382, 2275
Bse118I	RCCGGY	1 cut(s)	1641
Bse1I	ACTGG	1 cut(s)	370
Bse3DI	GCAATG	1 cut(s)	641
BseAI	TCCGGA	1 cut(s)	2104
BseBI	CCWGG	1 cut(s)	260
BseDI	CCNNGG	2 cut(s)	2015, 2330
BseGI	GGATG	7 cut(s)	223, 395, 1402, 1534, 1699, 1729, 2116
BseLI	CCNNNNNNNGG	2 cut(s)	382, 2275
BseMI	GCAATG	1 cut(s)	641
BseMII	CTCAG	8 cut(s)	68, 260, 270, 417, 540, 1069, 1080, 2280
BseNI	ACTGG	1 cut(s)	370
BseRI	GAGGAG	5 cut(s)	35, 42, 296, 566, 1054
BseSI	GKGCMC	1 cut(s)	2028
BseXI	GCAGC	6 cut(s)	21, 148, 1040, 1773, 1801, 1969
BsgI	GTGCAG	4 cut(s)	371, 1047, 1064, 2082
Bsh1285I	CGRYCG	1 cut(s)	980
BshFI	GGCC	4 cut(s)	1123, 2042, 2066, 2217
BsiEI	CGRYCG	1 cut(s)	980
BsiHKAI	GWGCWC	4 cut(s)	204, 318, 1452, 2028
BsiSI	CCGG	2 cut(s)	1642, 2105
BslFI	GGGAC	1 cut(s)	1751
BslI	CCNNNNNNNGG	2 cut(s)	382, 2275
BsmAI	GTCTC	6 cut(s)	1001, 1058, 1588, 1623, 1862, 2171
BsmBI	CGTCTC	1 cut(s)	1588
BsmFI	GGGAC	1 cut(s)	1751
BsmI	GAATGC	2 cut(s)	997, 1609
BsnI	GGCC	4 cut(s)	1123, 2042, 2066, 2217
Bso31I	GGTCTC	1 cut(s)	1623
Bsp1286I	GDGCHC	4 cut(s)	204, 318, 1452, 2028
Bsp13I	TCCGGA	1 cut(s)	2104
Bsp143I	GATC	9 cut(s)	445, 469, 568, 605, 617, 652, 776, 1332, 2197
BspACI	CCGC	5 cut(s)	1120, 1278, 1567, 2003, 2304
BspANI	GGCC	4 cut(s)	1123, 2042, 2066, 2217
BspCNI	CTCAG	8 cut(s)	67, 261, 271, 418, 541, 1068, 1079, 2281
BspEI	TCCGGA	1 cut(s)	2104
BspLI	GGNNCC	1 cut(s)	778
BspMAI	CTGCAG	2 cut(s)	586, 1791
BspOI	GCTAGC	1 cut(s)	1035
BspPI	GGATC	5 cut(s)	440, 613, 660, 771, 784
BspTI	CTTAAG	1 cut(s)	113
BspTNI	GGTCTC	1 cut(s)	1623
BsrDI	GCAATG	1 cut(s)	641
BsrFI	RCCGGY	1 cut(s)	1641
BsrI	ACTGG	1 cut(s)	370
BssAI	RCCGGY	1 cut(s)	1641
BssECI	CCNNGG	2 cut(s)	2015, 2330
BssMI	GATC	9 cut(s)	445, 469, 568, 605, 617, 652, 776, 1332, 2197
BssNI	GRCGYC	1 cut(s)	1597
BssSI	CACGAG	1 cut(s)	2052
BssT1I	CCWWGG	1 cut(s)	2330
Bst2BI	CACGAG	1 cut(s)	2052
Bst2UI	CCWGG	1 cut(s)	260
Bst4CI	ACNGT	7 cut(s)	129, 978, 999, 1320, 1804, 1873, 1984
Bst6I	CTCTTC	4 cut(s)	12, 569, 1941, 2269
BstACI	GRCGYC	1 cut(s)	1597
BstAFI	CTTAAG	1 cut(s)	113
BstAPI	GCANNNNNTGC	2 cut(s)	1778, 2000
BstC8I	GCNNGC	4 cut(s)	1033, 1047, 1497, 1643
BstDSI	CCRYGG	1 cut(s)	2015
BstEII	GGTNACC	1 cut(s)	2006
BstF5I	GGATG	7 cut(s)	223, 395, 1402, 1534, 1699, 1729, 2116
BstHHI	GCGC	1 cut(s)	795
BstKTI	GATC	9 cut(s)	448, 472, 571, 608, 620, 655, 779, 1335, 2200
BstMAI	GTCTC	6 cut(s)	1001, 1058, 1588, 1623, 1862, 2171
BstMBI	GATC	9 cut(s)	445, 469, 568, 605, 617, 652, 776, 1332, 2197
BstMCI	CGRYCG	1 cut(s)	980
BstNI	CCWGG	1 cut(s)	260
BstNSI	RCATGY	4 cut(s)	1207, 1932, 1975, 2024
BstPI	GGTNACC	1 cut(s)	2006
BstSCI	CCNGG	1 cut(s)	258
BstSFI	CTRYAG	2 cut(s)	582, 1787
BstSLI	GKGCMC	1 cut(s)	2028
BstV1I	GCAGC	6 cut(s)	21, 148, 1040, 1773, 1801, 1969
BstV2I	GAAGAC	2 cut(s)	776, 993
BstX2I	RGATCY	3 cut(s)	445, 617, 776
BstXI	CCANNNNNNTGG	2 cut(s)	259, 896
BstYI	RGATCY	3 cut(s)	445, 617, 776
BsuI	GTATCC	1 cut(s)	336
BsuRI	GGCC	4 cut(s)	1123, 2042, 2066, 2217
BtgI	CCRYGG	1 cut(s)	2015
BtsCI	GGATG	7 cut(s)	223, 395, 1402, 1534, 1699, 1729, 2116
BtsI	GCAGTG	1 cut(s)	228
BtsIMutI	CAGTG	3 cut(s)	228, 1074, 1980
Cac8I	GCNNGC	4 cut(s)	1033, 1047, 1497, 1643
CaiI	CAGNNNCTG	3 cut(s)	760, 1016, 1960
CfoI	GCGC	1 cut(s)	795
Cfr10I	RCCGGY	1 cut(s)	1641
Cfr13I	GGNCC	2 cut(s)	740, 2064
CseI	GACGC	1 cut(s)	1605
Csp6I	GTAC	2 cut(s)	974, 1463
CviAII	CATG	8 cut(s)	302, 1204, 1393, 1823, 1929, 1972, 2021, 2227
CviQI	GTAC	2 cut(s)	974, 1463
DpnI	GATC	9 cut(s)	447, 471, 570, 607, 619, 654, 778, 1334, 2199
DpnII	GATC	9 cut(s)	445, 469, 568, 605, 617, 652, 776, 1332, 2197
DraI	TTTAAA	1 cut(s)	213
EaeI	YGGCCR	2 cut(s)	2040, 2215
Eam1104I	CTCTTC	4 cut(s)	12, 569, 1941, 2269
EarI	CTCTTC	4 cut(s)	12, 569, 1941, 2269
Ecl136II	GAGCTC	3 cut(s)	202, 316, 1450
Eco130I	CCWWGG	1 cut(s)	2330
Eco24I	GRGCYC	3 cut(s)	204, 318, 1452
Eco31I	GGTCTC	1 cut(s)	1623
Eco32I	GATATC	1 cut(s)	276
Eco47I	GGWCC	1 cut(s)	740
Eco53kI	GAGCTC	3 cut(s)	202, 316, 1450
Eco57I	CTGAAG	5 cut(s)	480, 593, 621, 1589, 1922
Eco91I	GGTNACC	1 cut(s)	2006
EcoICRI	GAGCTC	3 cut(s)	202, 316, 1450
EcoO109I	RGGNCCY	1 cut(s)	2064
EcoO65I	GGTNACC	1 cut(s)	2006
EcoRII	CCWGG	1 cut(s)	258
EcoRV	GATATC	1 cut(s)	276
EcoT14I	CCWWGG	1 cut(s)	2330
EcoT38I	GRGCYC	3 cut(s)	204, 318, 1452
ErhI	CCWWGG	1 cut(s)	2330
Esp3I	CGTCTC	1 cut(s)	1588
FaeI	CATG	8 cut(s)	305, 1207, 1396, 1826, 1932, 1975, 2024, 2230
FalI	AAGNNNNNCTT	4 cut(s)	330, 362, 630, 662
FaqI	GGGAC	1 cut(s)	1751
FatI	CATG	8 cut(s)	301, 1203, 1392, 1822, 1928, 1971, 2020, 2226
FauI	CCCGC	2 cut(s)	1271, 1996
FbaI	TGATCA	2 cut(s)	469, 1332
FblI	GTMKAC	2 cut(s)	66, 2285
Fnu4HI	GCNGC	8 cut(s)	10, 162, 1029, 1121, 1568, 1787, 1790, 1958
FokI	GGATG	7 cut(s)	230, 402, 1409, 1541, 1706, 1736, 2123
FriOI	GRGCYC	3 cut(s)	204, 318, 1452
Fsp4HI	GCNGC	8 cut(s)	10, 162, 1029, 1121, 1568, 1787, 1790, 1958
FspBI	CTAG	7 cut(s)	206, 402, 659, 1032, 1050, 1164, 1857
GlaI	GCGC	1 cut(s)	794
GluI	GCNGC	8 cut(s)	10, 162, 1029, 1121, 1568, 1787, 1790, 1958
HaeIII	GGCC	4 cut(s)	1123, 2042, 2066, 2217
HapII	CCGG	2 cut(s)	1642, 2105
HgaI	GACGC	1 cut(s)	1605
HhaI	GCGC	1 cut(s)	795
Hin1I	GRCGYC	1 cut(s)	1597
Hin1II	CATG	8 cut(s)	305, 1207, 1396, 1826, 1932, 1975, 2024, 2230
Hin6I	GCGC	1 cut(s)	793
HinP1I	GCGC	1 cut(s)	793
HincII	GTYRAC	3 cut(s)	67, 1323, 2191
HindII	GTYRAC	3 cut(s)	67, 1323, 2191
HindIII	AAGCTT	2 cut(s)	537, 728
HpaII	CCGG	2 cut(s)	1642, 2105
HphI	GGTGA	4 cut(s)	923, 994, 1206, 2327
Hpy166II	GTNNAC	8 cut(s)	67, 437, 1245, 1323, 2026, 2191, 2286, 2318
Hpy8I	GTNNAC	8 cut(s)	67, 437, 1245, 1323, 2026, 2191, 2286, 2318
Hpy99I	CGWCG	2 cut(s)	2246, 2249
HpyAV	CCTTC	7 cut(s)	380, 596, 700, 822, 1670, 1764, 2162
HpyCH4III	ACNGT	7 cut(s)	129, 978, 999, 1320, 1804, 1873, 1984
HpyCH4IV	ACGT	1 cut(s)	1996
HpySE526I	ACGT	1 cut(s)	1996
Hsp92I	GRCGYC	1 cut(s)	1597
Hsp92II	CATG	8 cut(s)	305, 1207, 1396, 1826, 1932, 1975, 2024, 2230
HspAI	GCGC	1 cut(s)	793
Kpn2I	TCCGGA	1 cut(s)	2104
KroI	GCCGGC	1 cut(s)	1641
KroNI	GCCGGC	1 cut(s)	1643
Ksp22I	TGATCA	2 cut(s)	469, 1332
Kzo9I	GATC	9 cut(s)	445, 469, 568, 605, 617, 652, 776, 1332, 2197
LmnI	GCTCC	3 cut(s)	207, 298, 321
Lsp1109I	GCAGC	6 cut(s)	21, 148, 1040, 1773, 1801, 1969
LweI	GCATC	6 cut(s)	54, 208, 535, 1387, 1684, 2045
MaeI	CTAG	7 cut(s)	206, 402, 659, 1032, 1050, 1164, 1857
MaeII	ACGT	1 cut(s)	1996
MaeIII	GTNAC	4 cut(s)	123, 756, 1950, 2006
MalI	GATC	9 cut(s)	447, 471, 570, 607, 619, 654, 778, 1334, 2199
MboI	GATC	9 cut(s)	445, 469, 568, 605, 617, 652, 776, 1332, 2197
MflI	RGATCY	3 cut(s)	445, 617, 776
MhlI	GDGCHC	4 cut(s)	204, 318, 1452, 2028
MlyI	GAGTC	5 cut(s)	62, 1733, 2255, 2291, 2300
MroI	TCCGGA	1 cut(s)	2104
MroNI	GCCGGC	1 cut(s)	1641
MseI	TTAA	9 cut(s)	98, 114, 138, 212, 713, 722, 902, 1103, 1407
MslI	CAYNNNNRTG	1 cut(s)	1040
MspA1I	CMGCKG	1 cut(s)	1960
MspCI	CTTAAG	1 cut(s)	113
MspI	CCGG	2 cut(s)	1642, 2105
MspR9I	CCNGG	1 cut(s)	260
Mva1269I	GAATGC	2 cut(s)	997, 1609
MvaI	CCWGG	1 cut(s)	260
NaeI	GCCGGC	1 cut(s)	1643
NdeII	GATC	9 cut(s)	445, 469, 568, 605, 617, 652, 776, 1332, 2197
NgoMIV	GCCGGC	1 cut(s)	1641
NheI	GCTAGC	1 cut(s)	1031
NlaIII	CATG	8 cut(s)	305, 1207, 1396, 1826, 1932, 1975, 2024, 2230
NlaIV	GGNNCC	1 cut(s)	778
NspI	RCATGY	4 cut(s)	1207, 1932, 1975, 2024
PciI	ACATGT	1 cut(s)	1928
PcsI	WCGNNNNNNNCGW	1 cut(s)	2220
PctI	GAATGC	2 cut(s)	997, 1609
PdiI	GCCGGC	1 cut(s)	1643
PfeI	GAWTC	7 cut(s)	394, 430, 1421, 1484, 1963, 2231, 2255
PkrI	GCNGC	8 cut(s)	11, 163, 1030, 1122, 1569, 1788, 1791, 1959
PleI	GAGTC	5 cut(s)	62, 1733, 2255, 2290, 2299
PpsI	GAGTC	5 cut(s)	62, 1733, 2255, 2290, 2299
PscI	ACATGT	1 cut(s)	1928
PshBI	ATTAAT	1 cut(s)	1103
PsiI	TTATAA	1 cut(s)	686
Psp124BI	GAGCTC	3 cut(s)	204, 318, 1452
Psp6I	CCWGG	1 cut(s)	258
PspEI	GGTNACC	1 cut(s)	2006
PspGI	CCWGG	1 cut(s)	258
PspN4I	GGNNCC	1 cut(s)	778
PspPI	GGNCC	2 cut(s)	740, 2064
PstI	CTGCAG	2 cut(s)	586, 1791
PstNI	CAGNNNCTG	3 cut(s)	760, 1016, 1960
PsuI	RGATCY	3 cut(s)	445, 617, 776
PvuII	CAGCTG	1 cut(s)	1960
RsaI	GTAC	2 cut(s)	975, 1464
RsaNI	GTAC	2 cut(s)	974, 1463
RseI	CAYNNNNRTG	1 cut(s)	1040
SacI	GAGCTC	3 cut(s)	204, 318, 1452
SalI	GTCGAC	1 cut(s)	65
SaqAI	TTAA	9 cut(s)	98, 114, 138, 212, 713, 722, 902, 1103, 1407
SatI	GCNGC	8 cut(s)	10, 162, 1029, 1121, 1568, 1787, 1790, 1958
Sau3AI	GATC	9 cut(s)	445, 469, 568, 605, 617, 652, 776, 1332, 2197
Sau96I	GGNCC	2 cut(s)	740, 2064
SchI	GAGTC	5 cut(s)	62, 1733, 2255, 2291, 2300
ScrFI	CCNGG	1 cut(s)	260
SduI	GDGCHC	4 cut(s)	204, 318, 1452, 2028
SfaNI	GCATC	6 cut(s)	54, 208, 535, 1387, 1684, 2045
SfcI	CTRYAG	2 cut(s)	582, 1787
SinI	GGWCC	1 cut(s)	740
SmiMI	CAYNNNNRTG	1 cut(s)	1040
SmlI	CTYRAG	5 cut(s)	113, 336, 647, 1451, 1654
SmoI	CTYRAG	5 cut(s)	113, 336, 647, 1451, 1654
SsiI	CCGC	5 cut(s)	1120, 1278, 1567, 2003, 2304
SspMI	CTAG	7 cut(s)	206, 402, 659, 1032, 1050, 1164, 1857
SstI	GAGCTC	3 cut(s)	204, 318, 1452
StyD4I	CCNGG	1 cut(s)	258
StyI	CCWWGG	1 cut(s)	2330
TaaI	ACNGT	7 cut(s)	129, 978, 999, 1320, 1804, 1873, 1984
TaiI	ACGT	1 cut(s)	1999
TaqI	TCGA	4 cut(s)	66, 663, 1272, 1670
TauI	GCSGC	2 cut(s)	1123, 1570
TfiI	GAWTC	7 cut(s)	394, 430, 1421, 1484, 1963, 2231, 2255
Tru1I	TTAA	9 cut(s)	98, 114, 138, 212, 713, 722, 902, 1103, 1407
Tru9I	TTAA	9 cut(s)	98, 114, 138, 212, 713, 722, 902, 1103, 1407
TscAI	CASTG	3 cut(s)	228, 1074, 1987
TseI	GCWGC	6 cut(s)	9, 161, 1028, 1786, 1789, 1957
TspGWI	ACGGA	3 cut(s)	365, 732, 1880
TspRI	CASTG	3 cut(s)	228, 1074, 1987
Vha464I	CTTAAG	1 cut(s)	113
VneI	GTGCAC	1 cut(s)	2024
VpaK11BI	GGWCC	1 cut(s)	740
VspI	ATTAAT	1 cut(s)	1103
XapI	RAATTY	6 cut(s)	421, 767, 1091, 1169, 1845, 2335
XceI	RCATGY	4 cut(s)	1207, 1932, 1975, 2024
XmiI	GTMKAC	2 cut(s)	66, 2285
XspI	CTAG	7 cut(s)	206, 402, 659, 1032, 1050, 1164, 1857

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.