hmr,ptac12
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G34640 |
| fragaria_vesca | FvH4_3g05000 FvH4_3g05000 |
| malus_domestica | MD05G1278900.v1.1 MD10G1257800.v1.1 |
| prunus_persica | Prupe.4G086000_v2.0.a1 Prupe.4G086000_v2.0.a1 Prupe.4G086000_v2.0.a1 Prupe.4G086000_v2.0.a1 |
| pyrus_communis | pycom05g25940 pycom10g21400 |
| rosa_chinensis | RchiOBHm_Chr5g0014971 |
| rosa_laevigata | RLG00000032156 |
| rosa_multiflora | Rmu_sc0004889.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00061610 |
| rosa_rugosa | Rorug05G0022200 |
| rosa_samantha | Rh5AG117600 Rh5BG114800 Rh5CG126100 Rh5DG114100 |
| rosa_wichuraiana | Rw5G010130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 165 |
| AflIII | ACRYGT | 1 cut(s) | 213 |
| AgsI | TTSAA | 1 cut(s) | 85 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 145 |
| AjiI | CACGTC | 1 cut(s) | 214 |
| AluBI | AGCT | 3 cut(s) | 11, 100, 115 |
| AluI | AGCT | 3 cut(s) | 11, 100, 115 |
| ApeKI | GCWGC | 1 cut(s) | 115 |
| BbvI | GCAGC | 1 cut(s) | 102 |
| BccI | CCATC | 1 cut(s) | 190 |
| BceAI | ACGGC | 1 cut(s) | 157 |
| BfmI | CTRYAG | 2 cut(s) | 116, 162 |
| BisI | GCNGC | 1 cut(s) | 116 |
| BlsI | GCNGC | 1 cut(s) | 117 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 145 |
| BmgBI | CACGTC | 1 cut(s) | 214 |
| BmsI | GCATC | 1 cut(s) | 160 |
| Bpu10I | CCTNAGC | 1 cut(s) | 96 |
| BsaJI | CCNNGG | 1 cut(s) | 36 |
| BseDI | CCNNGG | 1 cut(s) | 36 |
| BseMII | CTCAG | 1 cut(s) | 87 |
| BseXI | GCAGC | 1 cut(s) | 102 |
| BspCNI | CTCAG | 1 cut(s) | 88 |
| BspMAI | CTGCAG | 1 cut(s) | 120 |
| BssECI | CCNNGG | 1 cut(s) | 36 |
| Bst6I | CTCTTC | 1 cut(s) | 150 |
| BstDEI | CTNAG | 1 cut(s) | 96 |
| BstEII | GGTNACC | 1 cut(s) | 122 |
| BstNSI | RCATGY | 1 cut(s) | 148 |
| BstPI | GGTNACC | 1 cut(s) | 122 |
| BstSFI | CTRYAG | 2 cut(s) | 116, 162 |
| BstV1I | GCAGC | 1 cut(s) | 102 |
| BtrI | CACGTC | 1 cut(s) | 214 |
| CviAII | CATG | 1 cut(s) | 145 |
| CviJI | RGCY | 4 cut(s) | 11, 100, 115, 161 |
| CviKI_1 | RGCY | 4 cut(s) | 11, 100, 115, 161 |
| DdeI | CTNAG | 1 cut(s) | 96 |
| DriI | GACNNNNNGTC | 1 cut(s) | 145 |
| Eam1104I | CTCTTC | 1 cut(s) | 150 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 145 |
| EarI | CTCTTC | 1 cut(s) | 150 |
| Eco91I | GGTNACC | 1 cut(s) | 122 |
| EcoO65I | GGTNACC | 1 cut(s) | 122 |
| FaeI | CATG | 1 cut(s) | 148 |
| FaiI | YATR | 1 cut(s) | 146 |
| FatI | CATG | 1 cut(s) | 144 |
| FblI | GTMKAC | 1 cut(s) | 165 |
| Fnu4HI | GCNGC | 1 cut(s) | 116 |
| Fsp4HI | GCNGC | 1 cut(s) | 116 |
| GluI | GCNGC | 1 cut(s) | 116 |
| Hin1II | CATG | 1 cut(s) | 148 |
| Hpy166II | GTNNAC | 1 cut(s) | 166 |
| Hpy188I | TCNGA | 1 cut(s) | 195 |
| Hpy188III | TCNNGA | 1 cut(s) | 95 |
| Hpy8I | GTNNAC | 1 cut(s) | 166 |
| Hpy99I | CGWCG | 1 cut(s) | 143 |
| HpyAV | CCTTC | 1 cut(s) | 11 |
| HpyCH4IV | ACGT | 1 cut(s) | 213 |
| HpyCH4V | TGCA | 2 cut(s) | 118, 173 |
| HpyF3I | CTNAG | 1 cut(s) | 96 |
| HpySE526I | ACGT | 1 cut(s) | 213 |
| Hsp92II | CATG | 1 cut(s) | 148 |
| LpnPI | CCDG | 2 cut(s) | 104, 108 |
| Lsp1109I | GCAGC | 1 cut(s) | 102 |
| LweI | GCATC | 1 cut(s) | 160 |
| MaeII | ACGT | 1 cut(s) | 213 |
| MaeIII | GTNAC | 1 cut(s) | 122 |
| MboII | GAAGA | 2 cut(s) | 35, 167 |
| MfeI | CAATTG | 1 cut(s) | 70 |
| MluCI | AATT | 1 cut(s) | 70 |
| MnlI | CCTC | 3 cut(s) | 31, 151, 199 |
| MseI | TTAA | 1 cut(s) | 182 |
| MunI | CAATTG | 1 cut(s) | 70 |
| NlaIII | CATG | 1 cut(s) | 148 |
| NspI | RCATGY | 1 cut(s) | 148 |
| PkrI | GCNGC | 1 cut(s) | 117 |
| PspEI | GGTNACC | 1 cut(s) | 122 |
| PstI | CTGCAG | 1 cut(s) | 120 |
| SaqAI | TTAA | 1 cut(s) | 182 |
| SatI | GCNGC | 1 cut(s) | 116 |
| SetI | ASST | 5 cut(s) | 13, 42, 102, 117, 216 |
| SfaNI | GCATC | 1 cut(s) | 160 |
| SfcI | CTRYAG | 2 cut(s) | 116, 162 |
| SgeI | CNNG | 9 cut(s) | 20, 49, 62, 78, 107, 118, 131, 139, 157 |
| Sse9I | AATT | 1 cut(s) | 70 |
| TaiI | ACGT | 1 cut(s) | 216 |
| TasI | AATT | 1 cut(s) | 70 |
| Tru1I | TTAA | 1 cut(s) | 182 |
| Tru9I | TTAA | 1 cut(s) | 182 |
| TseI | GCWGC | 1 cut(s) | 115 |
| TspDTI | ATGAA | 2 cut(s) | 30, 60 |
| XceI | RCATGY | 1 cut(s) | 148 |
| XmiI | GTMKAC | 1 cut(s) | 165 |