Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0008814

Physical Location & Seq

Genomic Coordinates Reverse (-)

43207285 .. 43210409

Gene Structure 3125 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1298700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGAGAATCCTGCTTAGGTATTCACTTCTTCTGGTGCTGATTGCAGCAGCAGAAGCAGAATCCACCTGCAACAGCACAGACCAAGCCCAAATCTCCAAGGCATTCAAATCAGTCTCCGGTTTCAACCTCTCCTGGCTCCAAAATTCGAACCGACCCAACTGCTCCAACCCAACCATCACTCAAATCAACCTCCCATCCAAAAACCTAAGCGGAATAATCTCATGGAAGTACCTCAGAAACTTGTCGAATCTGCAGGACCTCGATCTCTCTTTCAACAATCTCAAGGGCTCCATCCCGGGCTGGTTCTGGTCCCTCCCGAACCTGGTCCGAGTCAATCTCTCCAAGAACCGGCTCGGAGGGAGCTTCGGGCTCGAACACACATCGGGAAACGGCTCAGTTTCTTCGGTCCAGGAGCTCAATCTCTCATATAACCGGTACACCAACTTGGGCCAGCTCTCTGGGTTCCCGAACCTTACATTTCTCGACCTTTCCCACAACGATTTGGGCACTCTGCAGCCGTCTGCTTTCTCCAACCTCAACAATTTGCAGCACCTCGACATCTCCAGCAGCAGAATTTCTGGGAGTCTAAAACCCATCTCTGTTTTGCACGGATTGAAGTATTTGGACGTTTCGGACAACAAAATCAACGGTTCTTTCCCTTCGGATTTCCCTCCGCTAACGGGCCTGAAATTCTTGAACATTTCGCTCAATAATTTCACCGGCCGGGTCGGACCGGAAGAGTACCAGAAATTTGGGAAAAGCGCTTTTATCCACGCCGGAAAAAACGTCACACCTTTCGACAGTTCCAAAACCAAAGCCCCAAGCTTTCACACTACCAATGCAAACCCACCTCCCAAAACCCTCCAAAAACAAAAACCCATGACCCAAGAATCCCCCCACAAAGAACACAAATCGCAAAAATTCCATAAAATTCTTGTTCTGAGCTTATCCTGCGCATCGGCATTTGTAATCCTTCTGTCCATAAGTACTTGCGTAGCTTGCATATGCAGGAAAAAGTACTTTGCCAAAAAGCACAAATGGGCTATTTCCAAACCGGTTCAGTTAGTCCCGTTCAAGATCGAGAAATCGGGACCGTTCTCTTTCGAGACCGAGTCGGGGACGTCGTGGGTCGCCGACGTCAAAGACCCGACGTCGGCTCCGGTGGTGATGTTCGAGAAGCCGTTGCTGAACTTGACGTTTAAGGACTTGATTGCTGCAACGTCGCACTTCGGCAAGGACTCCCAGCTCGCCGAGGGGAGGTGTGGGCCCGTCTACACCGCCGTGCTGCCCGGCGACCTCCACATGGCTATAAAGGTGCTGGAGAACGCCAGGTACGTCGATTACGATGACGCGGTGCAAGTGTTTGAAAATCTTTCGAGATTGAAACATCCCAACCTGCTGCCTCTCTCCGGTTACTGCATTGCAGAGAAAAGTTGGTATTGTACGAGTTCATGGCGAACGGGGATAAGATCACTGACATCTCACGAATTGGATTCGAACCAATCAAGCGGGGACTTGCACAGATGGTTGCACGAGCTGCCCACCGGGGAGCCCAACGTGGAGGACTGGACTGGTGACACGTGGGAGCAAAGCTTTGTTAATGGAGCCTACTCGCCCGAAAAGAAAGGGTGGCTCACGCGCCACCGCATTGCGGTTGGAATAGCCTGTGGACTGGCGTACCTCCACCAGGCAGGGTCGAGTCCCGTAGTCCACGGCCACCTCGTAACTTCCAACATATTATTGGGTCCGGACTTCGAGCCGAGAATAGCCGATTTTGGTTTGAGAAGTATTGGGAGTCGGGGGGAAATTGGCGGCGGAGGTGAAGGCAGCGGTGCGGAGGCGGATGTGTATTGTTTTGGGGTGGTGTTGATGGAGCTGTTGACGGGGAGGACGGGGACGGCGGAGACGGTGGTGTGGGTGAGGAGGATGGTGAGGGAAGGGCGTGGTTTGGACGCGGTGGACGAGAGGTTGAGAGAGAGTGGGGAGTTGGAGAGGGAGATGGTGGAGAGCCTGCGAGTGGGGTACTTGTGTACGGCGGAGTCACCTGGGAAAAGGCCCAGCATGCAACAAGTCCTGGGTTTGCTCAAGGACATACATCCCAGTCCCACTGCCACTGTTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005516 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009625 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010033 GO:0010154 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0036211 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046777 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0061458 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_4 LRR_6 LRR_8 Pkinase_Tyr

Protein Analysis

708

Amino Acids

77.72

Weight (kDa)

8.73

Isoelectric Point (pI)

36.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	60 - 118	7.8e-09	Leucine rich repeat
LRR_8	PF13855	133 - 168	4.5e-06	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	413 - 595	3.9e-12	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45800 AT5G45800
fragaria_vesca	FvH4_3g07560 FvH4_3g07560
malus_domestica	MD05G1298700.v1.1 MD10G1278000.v1.1
prunus_persica	Prupe.4G063700_v2.0.a1
pyrus_communis	pycom05g27650 pycom10g23200
rosa_chinensis	RchiOBHm_Chr5g0011151
rosa_laevigata	RLG00000031815
rosa_multiflora	Rmu_co8285897.1_g000001 Rmu_sc0002990.1_g000016 Rmu_sc0003242.1_g000021 Rmu_sc0030140.1_g000001
rosa_roxburghii	Rroxscaffold_1G00065240
rosa_rugosa	Rorug04G0455400
rosa_samantha	Rh5AG087700 Rh5BG082400 Rh5CG095400 Rh5DG082200
rosa_wichuraiana	Rw0G000210 Rw5G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	74
AatII	GACGTC	3 cut(s)	1124, 1140, 1154
Acc16I	TGCGCA	1 cut(s)	955
Acc36I	ACCTGC	2 cut(s)	74, 1404
AccI	GTMKAC	1 cut(s)	1272
AccII	CGCG	3 cut(s)	1352, 1639, 1955
AccIII	TCCGGA	1 cut(s)	1747
AcoI	YGGCCR	2 cut(s)	721, 1714
AcsI	RAATTY	6 cut(s)	142, 573, 689, 749, 920, 930
AcvI	CACGTG	1 cut(s)	1581
AcyI	GRCGYC	3 cut(s)	1121, 1137, 1151
AfeI	AGCGCT	1 cut(s)	763
AflIII	ACRYGT	1 cut(s)	1578
AgeI	ACCGGT	2 cut(s)	432, 1054
AgsI	TTSAA	8 cut(s)	106, 124, 274, 616, 697, 1075, 1367, 1384
AhdI	GACNNNNNGTC	1 cut(s)	1150
AjnI	CCWGG	7 cut(s)	131, 321, 408, 1328, 1686, 2044, 2073
AleI	CACNNNNGTG	1 cut(s)	1280
Alw21I	GWGCWC	1 cut(s)	417
Alw26I	GTCTC	3 cut(s)	118, 1100, 1898
Ama87I	CYCGRG	1 cut(s)	295
Aor13HI	TCCGGA	1 cut(s)	1747
Aor51HI	AGCGCT	1 cut(s)	763
AoxI	GGCC	6 cut(s)	448, 682, 721, 1265, 1714, 2054
ApaI	GGGCCC	1 cut(s)	1269
ApoI	RAATTY	6 cut(s)	142, 573, 689, 749, 920, 930
AsiGI	ACCGGT	2 cut(s)	432, 1054
AspLEI	GCGC	3 cut(s)	764, 956, 1641
AsuC2I	CCSGG	5 cut(s)	296, 297, 725, 1290, 1546
AsuHPI	GGTGA	7 cut(s)	709, 1177, 1586, 1832, 1930, 1942, 2034
AsuII	TTCGAA	2 cut(s)	146, 1496
AvaI	CYCGRG	1 cut(s)	295
AvaII	GGWCC	7 cut(s)	256, 309, 325, 406, 731, 1091, 1745
BaeGI	GKGCMC	2 cut(s)	509, 1269
BaeI	ACNNNNGTAYC	4 cut(s)	1661, 1694, 2014, 2047
BanII	GRGCYC	5 cut(s)	290, 372, 417, 1269, 1554
BauI	CACGAG	1 cut(s)	1532
BbrPI	CACGTG	1 cut(s)	1581
Bbv12I	GWGCWC	1 cut(s)	417
BccI	CCATC	8 cut(s)	182, 202, 299, 602, 1518, 1864, 1921, 1993
BceAI	ACGGC	7 cut(s)	406, 502, 1165, 1265, 1729, 1914, 2049
BcgI	CGANNNNNNTGC	2 cut(s)	141, 175
BciT130I	CCWGG	7 cut(s)	133, 323, 410, 1330, 1688, 2046, 2075
BcnI	CCSGG	5 cut(s)	296, 297, 725, 1290, 1546
BcoDI	GTCTC	3 cut(s)	118, 1100, 1898
BfmI	CTRYAG	2 cut(s)	251, 512
BfoI	RGCGCY	1 cut(s)	765
BfuAI	ACCTGC	2 cut(s)	74, 1404
BmcAI	AGTACT	2 cut(s)	988, 1019
Bme18I	GGWCC	7 cut(s)	256, 309, 325, 406, 731, 1091, 1745
BmeRI	GACNNNNNGTC	1 cut(s)	1150
BmeT110I	CYCGRG	1 cut(s)	295
BmrI	ACTGGG	1 cut(s)	2094
BmsI	GCATC	1 cut(s)	965
BmuI	ACTGGG	1 cut(s)	2094
BplI	GAGNNNNNCTC	2 cut(s)	321, 353
BpmI	CTGGAG	2 cut(s)	547, 1340
Bpu10I	CCTNAGC	2 cut(s)	14, 206
Bpu14I	TTCGAA	2 cut(s)	146, 1496
BpuEI	CTTGAG	2 cut(s)	266, 2069
BpuMI	CCSGG	5 cut(s)	296, 297, 725, 1290, 1546
BsaAI	YACGTR	1 cut(s)	1581
BsaHI	GRCGYC	3 cut(s)	1121, 1137, 1151
BsaI	GGTCTC	1 cut(s)	1100
BsaJI	CCNNGG	7 cut(s)	96, 295, 1251, 1545, 1711, 2045, 2074
BsaWI	WCCGGW	7 cut(s)	116, 432, 733, 1054, 1159, 1409, 1747
BsaXI	ACNNNNNCTCC	2 cut(s)	1141, 1171
Bse118I	RCCGGY	4 cut(s)	348, 432, 719, 1054
Bse1I	ACTGG	4 cut(s)	1571, 1576, 1677, 2100
Bse3DI	GCAATG	2 cut(s)	1419, 1647
BseAI	TCCGGA	1 cut(s)	1747
BseBI	CCWGG	7 cut(s)	133, 323, 410, 1330, 1688, 2046, 2075
BseDI	CCNNGG	7 cut(s)	96, 295, 1251, 1545, 1711, 2045, 2074
BseGI	GGATG	6 cut(s)	194, 291, 1387, 1849, 1932, 2095
BseMI	GCAATG	2 cut(s)	1419, 1647
BseMII	CTCAG	3 cut(s)	247, 408, 932
BseNI	ACTGG	4 cut(s)	1571, 1576, 1677, 2100
BseRI	GAGGAG	1 cut(s)	1936
BseSI	GKGCMC	2 cut(s)	509, 1269
BseX3I	CGGCCG	1 cut(s)	721
BseYI	CCCAGC	2 cut(s)	1242, 2057
Bsh1236I	CGCG	3 cut(s)	1352, 1639, 1955
Bsh1285I	CGRYCG	1 cut(s)	724
BshFI	GGCC	6 cut(s)	450, 684, 723, 1267, 1716, 2056
BshTI	ACCGGT	2 cut(s)	432, 1054
BsiEI	CGRYCG	1 cut(s)	724
BsiHKAI	GWGCWC	1 cut(s)	417
BsiHKCI	CYCGRG	1 cut(s)	295
BslFI	GGGAC	8 cut(s)	295, 1052, 1104, 1132, 1526, 1686, 1909, 2088
BsmAI	GTCTC	3 cut(s)	118, 1100, 1898
BsmBI	CGTCTC	1 cut(s)	1898
BsmFI	GGGAC	8 cut(s)	295, 1052, 1104, 1132, 1526, 1686, 1909, 2088
BsmI	GAATGC	1 cut(s)	101
BsnI	GGCC	6 cut(s)	450, 684, 723, 1267, 1716, 2056
Bso31I	GGTCTC	1 cut(s)	1100
BsoBI	CYCGRG	1 cut(s)	295
Bsp119I	TTCGAA	2 cut(s)	146, 1496
Bsp120I	GGGCCC	1 cut(s)	1265
Bsp1286I	GDGCHC	6 cut(s)	290, 372, 417, 509, 1269, 1554
Bsp13I	TCCGGA	1 cut(s)	1747
Bsp143I	GATC	3 cut(s)	262, 1077, 1469
BspANI	GGCC	6 cut(s)	450, 684, 723, 1267, 1716, 2056
BspCNI	CTCAG	3 cut(s)	246, 407, 933
BspEI	TCCGGA	1 cut(s)	1747
BspFNI	CGCG	3 cut(s)	1352, 1639, 1955
BspMAI	CTGCAG	2 cut(s)	255, 516
BspMI	ACCTGC	2 cut(s)	74, 1404
BspT104I	TTCGAA	2 cut(s)	146, 1496
BspTNI	GGTCTC	1 cut(s)	1100
BsrDI	GCAATG	2 cut(s)	1419, 1647
BsrFI	RCCGGY	4 cut(s)	348, 432, 719, 1054
BsrI	ACTGG	4 cut(s)	1571, 1576, 1677, 2100
BssAI	RCCGGY	4 cut(s)	348, 432, 719, 1054
BssECI	CCNNGG	7 cut(s)	96, 295, 1251, 1545, 1711, 2045, 2074
BssMI	GATC	3 cut(s)	262, 1077, 1469
BssNI	GRCGYC	3 cut(s)	1121, 1137, 1151
BssSI	CACGAG	1 cut(s)	1532
BssT1I	CCWWGG	1 cut(s)	96
Bst2BI	CACGAG	1 cut(s)	1532
Bst2UI	CCWGG	7 cut(s)	133, 323, 410, 1330, 1688, 2046, 2075
Bst4CI	ACNGT	5 cut(s)	650, 803, 1095, 1909, 2116
Bst6I	CTCTTC	1 cut(s)	732
BstACI	GRCGYC	3 cut(s)	1121, 1137, 1151
BstAPI	GCANNNNNTGC	1 cut(s)	1537
BstBAI	YACGTR	1 cut(s)	1581
BstBI	TTCGAA	2 cut(s)	146, 1496
BstC8I	GCNNGC	5 cut(s)	452, 1000, 1248, 2012, 2063
BstDEI	CTNAG	5 cut(s)	14, 206, 233, 394, 941
BstDSI	CCRYGG	1 cut(s)	1711
BstENI	CCTNNNNNAGG	1 cut(s)	1685
BstF5I	GGATG	6 cut(s)	194, 291, 1387, 1849, 1932, 2095
BstFNI	CGCG	3 cut(s)	1352, 1639, 1955
BstH2I	RGCGCY	1 cut(s)	765
BstHHI	GCGC	3 cut(s)	764, 956, 1641
BstKTI	GATC	3 cut(s)	265, 1080, 1472
BstMAI	GTCTC	3 cut(s)	118, 1100, 1898
BstMBI	GATC	3 cut(s)	262, 1077, 1469
BstMCI	CGRYCG	1 cut(s)	724
BstMWI	GCNNNNNNNGC	5 cut(s)	53, 951, 999, 1537, 2062
BstNI	CCWGG	7 cut(s)	133, 323, 410, 1330, 1688, 2046, 2075
BstNSI	RCATGY	1 cut(s)	2065
BstSFI	CTRYAG	2 cut(s)	251, 512
BstSLI	GKGCMC	2 cut(s)	509, 1269
BstUI	CGCG	3 cut(s)	1352, 1639, 1955
BstXI	CCANNNNNNTGG	2 cut(s)	458, 752
BstZI	CGGCCG	1 cut(s)	721
BsuRI	GGCC	6 cut(s)	450, 684, 723, 1267, 1716, 2056
BtgI	CCRYGG	1 cut(s)	1711
BtsCI	GGATG	6 cut(s)	194, 291, 1387, 1849, 1932, 2095
BtsI	GCAGTG	1 cut(s)	2106
BtsIMutI	CAGTG	3 cut(s)	1472, 2106, 2112
BveI	ACCTGC	2 cut(s)	74, 1404
Cac8I	GCNNGC	5 cut(s)	452, 1000, 1248, 2012, 2063
CfoI	GCGC	3 cut(s)	764, 956, 1641
Cfr10I	RCCGGY	4 cut(s)	348, 432, 719, 1054
Cfr9I	CCCGGG	1 cut(s)	295
CpoI	CGGWCCG	1 cut(s)	731
CseI	GACGC	2 cut(s)	1358, 1961
CsiI	ACCWGGT	1 cut(s)	321
CspAI	ACCGGT	2 cut(s)	432, 1054
CspI	CGGWCCG	1 cut(s)	731
CviAII	CATG	5 cut(s)	222, 880, 1303, 1452, 2062
DdeI	CTNAG	5 cut(s)	14, 206, 233, 394, 941
DpnI	GATC	3 cut(s)	264, 1079, 1471
DpnII	GATC	3 cut(s)	262, 1077, 1469
DriI	GACNNNNNGTC	1 cut(s)	1150
EaeI	YGGCCR	2 cut(s)	721, 1714
EagI	CGGCCG	1 cut(s)	721
Eam1104I	CTCTTC	1 cut(s)	732
Eam1105I	GACNNNNNGTC	1 cut(s)	1150
EarI	CTCTTC	1 cut(s)	732
EciI	GGCGGA	4 cut(s)	1830, 1856, 1916, 2051
Ecl136II	GAGCTC	1 cut(s)	415
EclXI	CGGCCG	1 cut(s)	721
Eco130I	CCWWGG	1 cut(s)	96
Eco24I	GRGCYC	5 cut(s)	290, 372, 417, 1269, 1554
Eco31I	GGTCTC	1 cut(s)	1100
Eco47I	GGWCC	7 cut(s)	256, 309, 325, 406, 731, 1091, 1745
Eco47III	AGCGCT	1 cut(s)	763
Eco52I	CGGCCG	1 cut(s)	721
Eco53kI	GAGCTC	1 cut(s)	415
Eco72I	CACGTG	1 cut(s)	1581
Eco88I	CYCGRG	1 cut(s)	295
EcoICRI	GAGCTC	1 cut(s)	415
EcoNI	CCTNNNNNAGG	1 cut(s)	1685
EcoO109I	RGGNCCY	1 cut(s)	256
EcoRII	CCWGG	7 cut(s)	131, 321, 408, 1328, 1686, 2044, 2073
EcoT14I	CCWWGG	1 cut(s)	96
EcoT38I	GRGCYC	5 cut(s)	290, 372, 417, 1269, 1554
ErhI	CCWWGG	1 cut(s)	96
Esp3I	CGTCTC	1 cut(s)	1898
FaeI	CATG	5 cut(s)	225, 883, 1306, 1455, 2065
FaqI	GGGAC	8 cut(s)	295, 1052, 1104, 1132, 1526, 1686, 1909, 2088
FatI	CATG	5 cut(s)	221, 879, 1302, 1451, 2061
FauI	CCCGC	1 cut(s)	1502
FauNDI	CATATG	1 cut(s)	1004
FblI	GTMKAC	1 cut(s)	1272
FokI	GGATG	6 cut(s)	181, 278, 1374, 1856, 1939, 2082
FriOI	GRGCYC	5 cut(s)	290, 372, 417, 1269, 1554
FspI	TGCGCA	1 cut(s)	955
GlaI	GCGC	3 cut(s)	763, 955, 1640
GsaI	CCCAGC	2 cut(s)	1246, 2061
GsuI	CTGGAG	2 cut(s)	547, 1340
HaeII	RGCGCY	1 cut(s)	765
HaeIII	GGCC	6 cut(s)	450, 684, 723, 1267, 1716, 2056
HgaI	GACGC	2 cut(s)	1358, 1961
HhaI	GCGC	3 cut(s)	764, 956, 1641
Hin1I	GRCGYC	3 cut(s)	1121, 1137, 1151
Hin1II	CATG	5 cut(s)	225, 883, 1306, 1455, 2065
Hin6I	GCGC	3 cut(s)	762, 954, 1639
HinP1I	GCGC	3 cut(s)	762, 954, 1639
HincII	GTYRAC	1 cut(s)	1881
HindII	GTYRAC	1 cut(s)	1881
HindIII	AAGCTT	2 cut(s)	823, 1591
HphI	GGTGA	7 cut(s)	709, 1177, 1586, 1832, 1930, 1942, 2034
Hpy166II	GTNNAC	7 cut(s)	438, 1273, 1670, 1711, 1881, 1960, 2031
Hpy188I	TCNGA	7 cut(s)	236, 329, 356, 634, 664, 731, 942
Hpy8I	GTNNAC	7 cut(s)	438, 1273, 1670, 1711, 1881, 1960, 2031
Hpy99I	CGWCG	6 cut(s)	1126, 1139, 1153, 1156, 1225, 1340
HpyAV	CCTTC	4 cut(s)	669, 983, 1817, 1931
HpyCH4III	ACNGT	5 cut(s)	650, 803, 1095, 1909, 2116
HpyF10VI	GCNNNNNNNGC	5 cut(s)	53, 951, 999, 1537, 2062
HpyF3I	CTNAG	5 cut(s)	14, 206, 233, 394, 941
Hsp92I	GRCGYC	3 cut(s)	1121, 1137, 1151
Hsp92II	CATG	5 cut(s)	225, 883, 1306, 1455, 2065
HspAI	GCGC	3 cut(s)	762, 954, 1639
Kpn2I	TCCGGA	1 cut(s)	1747
Kzo9I	GATC	3 cut(s)	262, 1077, 1469
LweI	GCATC	1 cut(s)	965
MabI	ACCWGGT	1 cut(s)	321
MaeIII	GTNAC	5 cut(s)	787, 1412, 1574, 1723, 2040
MalI	GATC	3 cut(s)	264, 1079, 1471
MboI	GATC	3 cut(s)	262, 1077, 1469
MboII	GAAGA	3 cut(s)	20, 393, 749
MhlI	GDGCHC	6 cut(s)	290, 372, 417, 509, 1269, 1554
MlyI	GAGTC	7 cut(s)	339, 592, 1121, 1232, 1708, 1804, 2048
MmeI	TCCRAC	6 cut(s)	189, 555, 709, 1636, 1755, 1968
MroI	TCCGGA	1 cut(s)	1747
MseI	TTAA	2 cut(s)	1200, 1599
MslI	CAYNNNNRTG	1 cut(s)	1280
MspA1I	CMGCKG	1 cut(s)	1830
Mva1269I	GAATGC	1 cut(s)	101
MvaI	CCWGG	7 cut(s)	133, 323, 410, 1330, 1688, 2046, 2075
MvnI	CGCG	3 cut(s)	1352, 1639, 1955
MwoI	GCNNNNNNNGC	5 cut(s)	53, 951, 999, 1537, 2062
NciI	CCSGG	5 cut(s)	296, 297, 725, 1290, 1546
NdeI	CATATG	1 cut(s)	1004
NdeII	GATC	3 cut(s)	262, 1077, 1469
NlaIII	CATG	5 cut(s)	225, 883, 1306, 1455, 2065
NmeAIII	GCCGAG	2 cut(s)	1276, 1785
NmuCI	GTSAC	3 cut(s)	787, 1574, 2040
NsbI	TGCGCA	1 cut(s)	955
NspI	RCATGY	1 cut(s)	2065
NspV	TTCGAA	2 cut(s)	146, 1496
OliI	CACNNNNGTG	1 cut(s)	1280
PaeI	GCATGC	1 cut(s)	2065
PaqCI	CACCTGC	1 cut(s)	74
PcsI	WCGNNNNNNNCGW	5 cut(s)	1121, 1332, 1341, 1719, 1959
PctI	GAATGC	1 cut(s)	101
PfeI	GAWTC	5 cut(s)	6, 59, 247, 890, 1493
PflFI	GACNNNGTC	1 cut(s)	1111
PfoI	TCCNGGA	1 cut(s)	408
PinAI	ACCGGT	2 cut(s)	432, 1054
PleI	GAGTC	7 cut(s)	338, 591, 1120, 1232, 1707, 1803, 2047
PmaCI	CACGTG	1 cut(s)	1581
PmlI	CACGTG	1 cut(s)	1581
PpsI	GAGTC	7 cut(s)	338, 591, 1120, 1232, 1707, 1803, 2047
Ppu21I	YACGTR	1 cut(s)	1581
PpuMI	RGGWCCY	1 cut(s)	256
Psp124BI	GAGCTC	1 cut(s)	417
Psp5II	RGGWCCY	1 cut(s)	256
Psp6I	CCWGG	7 cut(s)	131, 321, 408, 1328, 1686, 2044, 2073
PspCI	CACGTG	1 cut(s)	1581
PspFI	CCCAGC	2 cut(s)	1242, 2057
PspGI	CCWGG	7 cut(s)	131, 321, 408, 1328, 1686, 2044, 2073
PspOMI	GGGCCC	1 cut(s)	1265
PspPPI	RGGWCCY	1 cut(s)	256
PsrI	GAACNNNNNNTAC	2 cut(s)	1316, 1348
PstI	CTGCAG	2 cut(s)	255, 516
PsyI	GACNNNGTC	1 cut(s)	1111
RseI	CAYNNNNRTG	1 cut(s)	1280
Rsr2I	CGGWCCG	1 cut(s)	731
RsrII	CGGWCCG	1 cut(s)	731
SacI	GAGCTC	1 cut(s)	417
SaqAI	TTAA	2 cut(s)	1200, 1599
Sau3AI	GATC	3 cut(s)	262, 1077, 1469
ScaI	AGTACT	2 cut(s)	988, 1019
SchI	GAGTC	7 cut(s)	339, 592, 1121, 1232, 1708, 1804, 2048
SduI	GDGCHC	6 cut(s)	290, 372, 417, 509, 1269, 1554
SexAI	ACCWGGT	1 cut(s)	321
SfaNI	GCATC	1 cut(s)	965
SfcI	CTRYAG	2 cut(s)	251, 512
SfuI	TTCGAA	2 cut(s)	146, 1496
SinI	GGWCC	7 cut(s)	256, 309, 325, 406, 731, 1091, 1745
SmaI	CCCGGG	1 cut(s)	297
SmiMI	CAYNNNNRTG	1 cut(s)	1280
SmlI	CTYRAG	2 cut(s)	281, 2084
SmoI	CTYRAG	2 cut(s)	281, 2084
SphI	GCATGC	1 cut(s)	2065
SstI	GAGCTC	1 cut(s)	417
StyI	CCWWGG	1 cut(s)	96
TaaI	ACNGT	5 cut(s)	650, 803, 1095, 1909, 2116
TaqII	GACCGA	2 cut(s)	394, 1124
TatI	WGTACW	2 cut(s)	986, 1017
TauI	GCSGC	1 cut(s)	1815
TfiI	GAWTC	5 cut(s)	6, 59, 247, 890, 1493
Tru1I	TTAA	2 cut(s)	1200, 1599
Tru9I	TTAA	2 cut(s)	1200, 1599
TscAI	CASTG	3 cut(s)	1479, 2113, 2119
TseFI	GTSAC	3 cut(s)	787, 1574, 2040
Tsp45I	GTSAC	3 cut(s)	787, 1574, 2040
TspDTI	ATGAA	1 cut(s)	1440
TspGWI	ACGGA	1 cut(s)	624
TspMI	CCCGGG	1 cut(s)	295
TspRI	CASTG	3 cut(s)	1479, 2113, 2119
Tth111I	GACNNNGTC	1 cut(s)	1111
VpaK11BI	GGWCC	7 cut(s)	256, 309, 325, 406, 731, 1091, 1745
XagI	CCTNNNNNAGG	1 cut(s)	1685
XapI	RAATTY	6 cut(s)	142, 573, 689, 749, 920, 930
XceI	RCATGY	1 cut(s)	2065
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1738
XmaI	CCCGGG	1 cut(s)	295
XmiI	GTMKAC	1 cut(s)	1272
ZraI	GACGTC	3 cut(s)	1122, 1138, 1152
ZrmI	AGTACT	2 cut(s)	988, 1019

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.