Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0008814

Physical Location & Seq

Genomic Coordinates Reverse (-)

86988035 .. 86990625

Gene Structure 2591 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00065240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGAGATTCATCATCTTCTTCTTCTTTGGGTTTTTTCTGCTTCTTCTGGTTCTGATTGCAACAGTGGAATCTACATCAACATGCAATAGTACAGACCAAGAACAAGTCTCCAAGGCCTTCAAATCAGTCCAAAGCGTCGATCTTTCTTGGTTCCAAAATCGAACTCCCAACTGCTCAAACCCACCGATCACAGAAATCAAGCTCCATTCCAGAAACCTCAGCGGCATAGTCTTATGGAAGTACCTCAGAAACATGTCACATCTTCAAAACCTCGATCTGTCAAACAATTCTCTCAAAGGCTCTGTCCCAGGTTGGTTCTGGTCCCTTCCAACCTTACTCGAAGTCAATCTCTCCAAGAACAAGTTCGGTGGCAGCTTCGGGTTCGAAAGCGGTTCAGTTTCCTCGGTCCAGAAGCTCAATCTCTCCAGCAACAGGTTCACCAACTCTGTTCTGCTCTCTGGTTTTCCACACCTCAAAATCCTCGACCTTTCTCACAACAACTTGGGTGCTCTGCCTTCTGGTCTTGCCAATCTCACTAATCTCCACCACCTCGACATTTCGAGCTGCAAAATCTCCGGCAGCTCGAAACCGATCTCTGTTCTTCGCGCATTGACCTACTTAGATGTCTCAAACAACTCCATGAACGGTTCTTTCCCTTCGGATTTTCCCCCCATTAGTCCCCTCAAATTCTTGAACATTTCGTTCAATAATTTCAGAGGTATAGTCGGACCAGAAAAGTACCAAAAATTTGGCAAAGCAGCTTTCATTCATGCTGGGAAGGATTTAAATCTTACATCTTTCAATGCTTCCAATTCCAAATCCCCAACCTTTCACTCTCCACCACCACATTTTAAATCCCCAATTCAAAAACCTAAACCCCTCCAAAACCCCTCCACCCTTAAAAAACCCAAAAGGACTCTCATTATCAGCCTATCTTGCGCCTCCACATTTGTGCTTGCTTTCATAGCCATTTGCATAGCTTGCAGATACAGAAGAAAGCAATTTGCCAAGAAACACAAATGGGCCATCTCCAAACCGGTCCAGCTAGACCGGGTCAGGATCGAGAAGTCCGGCCCGTTCTCCTTCGAAACCGAGTCCGGGACATCCTGGGTCGCCGACATCAAGGAGCCAACTTCGGCCCAGGTTGTCATGTTCGAGAAGCCGCTCATGAACTACCTCACCTTCAAAGACCTCATCGCCGCCACGTCACACTTCGGCAAAGACTCCCAGCTGGCCGAGGGCCGCTGCGGGCCCGTCTACACCGCCGTGCTTCCCGGAGACCTCCACGTGGCGATCAAGGTCTTGGAAAACGCCAGAGACGTCGAACACGACGCGGCGGTGGACATGTTCGAAAACCTGTCGAAGTTGAAACACCCGAACTTGTTACCTGTCTCCGGTTACTGCATTGCAGGGAAAGAGAAGCTGGTGTTGTATGAGTTCATGGCGAACGGGGATTTACACAGGTGGCTGCACGAGCTGCCAACCGGGGAGCCCAACGTGGAGGATTGGAGTGCCGACACGTGGGACCAGAGTGGAGCCTACTCGCCCGAGAAGAAGGGTTGGCTCACGCGCCACCGCATTGCGGTTGGCATAGCGCGTGGGCTGGCGTACCTCCACCATGCCGGGTCGAAGCCGGTGGTACACGGCCACCTTGTGACTTCGAACATATTGCTAGGGGCGAATTTCGAGCCGAGAATTGCGGATTTCGGGCTGCGGAATTTCGGGATGAGGGATGGAGATATCGGCGGCGGGACTGAGACGGACGTGTATTGTTTTGGGGTGGTGTTGATGGAGCTGTTGACGGGGCGGCCTGGGACGGCGGAGACTGTGGTGTGGGTGAGGAGGATGGTGAGGGAGGCGCGTGGGTTGGACGCGCTGGATGAGAGGTTGAGGGAAGGTGGGGATTTGGAGAGGGAGATGGTGGAGAGTCTCCGAGTTGGGTACTTGTGTACGGCGGAGTCACCTGGGAAAAGGCCCAGCATGCAGCAGGTGCTGGGTTTGCTCAAAGACATACATCCCAGTTCCACTGCCACTCTGGGCTTTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005516 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009625 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010033 GO:0010154 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0036211 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046777 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0061458 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_6 LRR_8 Pkinase_Tyr

Protein Analysis

682

Amino Acids

75.53

Weight (kDa)

9.22

Isoelectric Point (pI)

32.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	79 - 122	1.5e-07	Leucine rich repeat
LRR_8	PF13855	135 - 191	3.4e-06	Leucine rich repeat
LRR_4	PF12799	156 - 192	6.4e-07	Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr	PF07714	408 - 573	7.5e-22	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	408 - 572	3.2e-13	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45800 AT5G45800
fragaria_vesca	FvH4_3g07560 FvH4_3g07560
malus_domestica	MD05G1298700.v1.1 MD10G1278000.v1.1
prunus_persica	Prupe.4G063700_v2.0.a1
pyrus_communis	pycom05g27650 pycom10g23200
rosa_chinensis	RchiOBHm_Chr5g0011151
rosa_laevigata	RLG00000031815
rosa_multiflora	Rmu_co8285897.1_g000001 Rmu_sc0002990.1_g000016 Rmu_sc0003242.1_g000021 Rmu_sc0030140.1_g000001
rosa_roxburghii	Rroxscaffold_1G00065240
rosa_rugosa	Rorug04G0455400
rosa_samantha	Rh5AG087700 Rh5BG082400 Rh5CG095400 Rh5DG082200
rosa_wichuraiana	Rw0G000210 Rw5G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1978
AatII	GACGTC	1 cut(s)	1323
Acc36I	ACCTGC	1 cut(s)	1978
AccBSI	CCGCTC	1 cut(s)	1165
AccI	GTMKAC	1 cut(s)	1257
AccII	CGCG	6 cut(s)	606, 1334, 1570, 1597, 1861, 1874
AclWI	GGATC	1 cut(s)	1067
AcoI	YGGCCR	2 cut(s)	1233, 1645
AcsI	RAATTY	4 cut(s)	686, 746, 1681, 1717
AcvI	CACGTG	2 cut(s)	1288, 1521
AcyI	GRCGYC	1 cut(s)	1320
AdeI	CACNNNGTG	1 cut(s)	1654
AfaI	GTAC	7 cut(s)	91, 242, 740, 1610, 1641, 1943, 1951
AfiI	CCNNNNNNNGG	6 cut(s)	432, 1098, 1288, 1394, 1521, 1582
AflIII	ACRYGT	4 cut(s)	252, 1344, 1518, 1764
AgeI	ACCGGT	1 cut(s)	1036
AgsI	TTSAA	8 cut(s)	121, 266, 694, 706, 802, 866, 1186, 1369
AjiI	CACGTC	2 cut(s)	1206, 1765
AjnI	CCWGG	5 cut(s)	307, 1106, 1140, 1810, 1963
AjuI	GAANNNNNNNTTGG	2 cut(s)	347, 379
AleI	CACNNNNGTG	2 cut(s)	950, 1265
Alw21I	GWGCWC	1 cut(s)	511
Alw26I	GTCTC	8 cut(s)	112, 631, 1272, 1311, 1396, 1751, 1817, 1934
AlwI	GGATC	1 cut(s)	1067
AlwNI	CAGNNNCTG	1 cut(s)	1993
Ama87I	CYCGRG	1 cut(s)	1547
ApaI	GGGCCC	1 cut(s)	1254
ApeKI	GCWGC	9 cut(s)	372, 564, 579, 758, 1245, 1468, 1477, 1711, 1984
ApoI	RAATTY	4 cut(s)	686, 746, 1681, 1717
ArsI	GACNNNNNNTTYG	2 cut(s)	288, 320
AsiGI	ACCGGT	1 cut(s)	1036
Asp700I	GAANNNNTTC	1 cut(s)	362
AspLEI	GCGC	6 cut(s)	608, 941, 1572, 1597, 1861, 1876
AsuC2I	CCSGG	5 cut(s)	1052, 1099, 1275, 1486, 1624
AsuHPI	GGTGA	5 cut(s)	430, 1171, 1849, 1861, 1953
AsuII	TTCGAA	4 cut(s)	384, 1086, 1350, 1661
AvaI	CYCGRG	1 cut(s)	1547
AvaII	GGWCC	5 cut(s)	321, 406, 728, 1039, 1525
BaeGI	GKGCMC	1 cut(s)	1254
BaeI	ACNNNNGTAYC	2 cut(s)	1933, 1966
BanII	GRGCYC	2 cut(s)	1254, 1494
BauI	CACGAG	1 cut(s)	1472
BbrPI	CACGTG	2 cut(s)	1288, 1521
Bbv12I	GWGCWC	1 cut(s)	511
BbvCI	CCTCAGC	1 cut(s)	218
BbvI	GCAGC	9 cut(s)	384, 551, 591, 770, 1232, 1455, 1464, 1698, 1996
BccI	CCATC	5 cut(s)	1034, 1727, 1783, 1840, 1912
BceAI	ACGGC	4 cut(s)	1250, 1660, 1833, 1968
BcgI	CGANNNNNNTGC	2 cut(s)	1651, 1685
BciT130I	CCWGG	5 cut(s)	309, 1108, 1142, 1812, 1965
BcnI	CCSGG	5 cut(s)	1052, 1099, 1275, 1486, 1624
BcoDI	GTCTC	8 cut(s)	112, 631, 1272, 1311, 1396, 1751, 1817, 1934
BfaI	CTAG	2 cut(s)	1046, 1673
BfuAI	ACCTGC	1 cut(s)	1978
Bme18I	GGWCC	5 cut(s)	321, 406, 728, 1039, 1525
BmeT110I	CYCGRG	1 cut(s)	1547
BmgBI	CACGTC	2 cut(s)	1206, 1765
BmiI	GGNNCC	7 cut(s)	152, 323, 1128, 1252, 1491, 1526, 1537
BmrI	ACTGGG	1 cut(s)	2013
BmuI	ACTGGG	1 cut(s)	2013
BpmI	CTGGAG	1 cut(s)	409
Bpu10I	CCTNAGC	1 cut(s)	218
Bpu14I	TTCGAA	4 cut(s)	384, 1086, 1350, 1661
BpuMI	CCSGG	5 cut(s)	1052, 1099, 1275, 1486, 1624
BsaAI	YACGTR	2 cut(s)	1288, 1521
BsaBI	GATNNNNATC	1 cut(s)	786
BsaHI	GRCGYC	1 cut(s)	1320
BsaI	GGTCTC	1 cut(s)	1272
BsaJI	CCNNGG	9 cut(s)	111, 307, 402, 1107, 1140, 1236, 1485, 1811, 1964
BsaWI	WCCGGW	2 cut(s)	1036, 1394
Bsc4I	CCNNNNNNNGG	6 cut(s)	432, 1098, 1288, 1394, 1521, 1582
Bse118I	RCCGGY	2 cut(s)	1036, 1633
Bse1I	ACTGG	1 cut(s)	2019
Bse3DI	GCAATG	2 cut(s)	1404, 1578
Bse8I	GATNNNNATC	1 cut(s)	786
BseBI	CCWGG	5 cut(s)	309, 1108, 1142, 1812, 1965
BseDI	CCNNGG	9 cut(s)	111, 307, 402, 1107, 1140, 1236, 1485, 1811, 1964
BseGI	GGATG	6 cut(s)	1103, 1731, 1738, 1851, 1885, 2014
BseJI	GATNNNNATC	1 cut(s)	786
BseLI	CCNNNNNNNGG	6 cut(s)	432, 1098, 1288, 1394, 1521, 1582
BseMI	GCAATG	2 cut(s)	1404, 1578
BseMII	CTCAG	3 cut(s)	232, 259, 1746
BseNI	ACTGG	1 cut(s)	2019
BseRI	GAGGAG	1 cut(s)	1855
BseSI	GKGCMC	1 cut(s)	1254
BseXI	GCAGC	9 cut(s)	384, 551, 591, 770, 1232, 1455, 1464, 1698, 1996
BseYI	CCCAGC	4 cut(s)	773, 1227, 1976, 1993
BsgI	GTGCAG	1 cut(s)	1454
Bsh1236I	CGCG	6 cut(s)	606, 1334, 1570, 1597, 1861, 1874
BshTI	ACCGGT	1 cut(s)	1036
BsiHKAI	GWGCWC	1 cut(s)	511
BsiHKCI	CYCGRG	1 cut(s)	1547
BslFI	GGGAC	7 cut(s)	290, 307, 663, 1114, 1538, 1765, 1828
BslI	CCNNNNNNNGG	6 cut(s)	432, 1098, 1288, 1394, 1521, 1582
BsmAI	GTCTC	8 cut(s)	112, 631, 1272, 1311, 1396, 1751, 1817, 1934
BsmBI	CGTCTC	2 cut(s)	1311, 1751
BsmFI	GGGAC	7 cut(s)	290, 307, 663, 1114, 1538, 1765, 1828
Bso31I	GGTCTC	1 cut(s)	1272
BsoBI	CYCGRG	1 cut(s)	1547
Bsp119I	TTCGAA	4 cut(s)	384, 1086, 1350, 1661
Bsp120I	GGGCCC	1 cut(s)	1250
Bsp1286I	GDGCHC	3 cut(s)	511, 1254, 1494
Bsp143I	GATC	6 cut(s)	139, 186, 274, 591, 1059, 1293
BspCNI	CTCAG	3 cut(s)	231, 258, 1747
BspFNI	CGCG	6 cut(s)	606, 1334, 1570, 1597, 1861, 1874
BspHI	TCATGA	1 cut(s)	1167
BspLI	GGNNCC	7 cut(s)	152, 323, 1128, 1252, 1491, 1526, 1537
BspMI	ACCTGC	1 cut(s)	1978
BspPI	GGATC	1 cut(s)	1067
BspT104I	TTCGAA	4 cut(s)	384, 1086, 1350, 1661
BspTNI	GGTCTC	1 cut(s)	1272
BsrBI	CCGCTC	1 cut(s)	1165
BsrDI	GCAATG	2 cut(s)	1404, 1578
BsrFI	RCCGGY	2 cut(s)	1036, 1633
BsrI	ACTGG	1 cut(s)	2019
BssAI	RCCGGY	2 cut(s)	1036, 1633
BssECI	CCNNGG	9 cut(s)	111, 307, 402, 1107, 1140, 1236, 1485, 1811, 1964
BssMI	GATC	6 cut(s)	139, 186, 274, 591, 1059, 1293
BssNI	GRCGYC	1 cut(s)	1320
BssSI	CACGAG	1 cut(s)	1472
BssT1I	CCWWGG	1 cut(s)	111
Bst2BI	CACGAG	1 cut(s)	1472
Bst2UI	CCWGG	5 cut(s)	309, 1108, 1142, 1812, 1965
Bst4CI	ACNGT	3 cut(s)	64, 647, 1828
BstACI	GRCGYC	1 cut(s)	1320
BstAPI	GCANNNNNTGC	3 cut(s)	981, 1477, 1990
BstBAI	YACGTR	2 cut(s)	1288, 1521
BstBI	TTCGAA	4 cut(s)	384, 1086, 1350, 1661
BstC8I	GCNNGC	6 cut(s)	957, 982, 1233, 1250, 1605, 1982
BstDEI	CTNAG	4 cut(s)	218, 245, 619, 1755
BstF5I	GGATG	6 cut(s)	1103, 1731, 1738, 1851, 1885, 2014
BstFNI	CGCG	6 cut(s)	606, 1334, 1570, 1597, 1861, 1874
BstHHI	GCGC	6 cut(s)	608, 941, 1572, 1597, 1861, 1876
BstKTI	GATC	6 cut(s)	142, 189, 277, 594, 1062, 1296
BstMAI	GTCTC	8 cut(s)	112, 631, 1272, 1311, 1396, 1751, 1817, 1934
BstMBI	GATC	6 cut(s)	139, 186, 274, 591, 1059, 1293
BstMWI	GCNNNNNNNGC	8 cut(s)	936, 965, 981, 1474, 1477, 1981, 1990, 1999
BstNI	CCWGG	5 cut(s)	309, 1108, 1142, 1812, 1965
BstNSI	RCATGY	4 cut(s)	84, 256, 1348, 1984
BstSLI	GKGCMC	1 cut(s)	1254
BstUI	CGCG	6 cut(s)	606, 1334, 1570, 1597, 1861, 1874
BstV1I	GCAGC	9 cut(s)	384, 551, 591, 770, 1232, 1455, 1464, 1698, 1996
BstXI	CCANNNNNNTGG	1 cut(s)	749
BtgZI	GCGATG	1 cut(s)	1180
BtrI	CACGTC	2 cut(s)	1206, 1765
BtsCI	GGATG	6 cut(s)	1103, 1731, 1738, 1851, 1885, 2014
BtsI	GCAGTG	1 cut(s)	2025
BtsIMutI	CAGTG	2 cut(s)	69, 2025
BveI	ACCTGC	1 cut(s)	1978
Cac8I	GCNNGC	6 cut(s)	957, 982, 1233, 1250, 1605, 1982
CaiI	CAGNNNCTG	1 cut(s)	1993
CciI	TCATGA	1 cut(s)	1167
CfoI	GCGC	6 cut(s)	608, 941, 1572, 1597, 1861, 1876
Cfr10I	RCCGGY	2 cut(s)	1036, 1633
CseI	GACGC	3 cut(s)	124, 1340, 1880
Csp6I	GTAC	7 cut(s)	90, 241, 739, 1609, 1640, 1942, 1950
CspAI	ACCGGT	1 cut(s)	1036
CspCI	CAANNNNNGTGG	2 cut(s)	349, 384
CviQI	GTAC	7 cut(s)	90, 241, 739, 1609, 1640, 1942, 1950
DdeI	CTNAG	4 cut(s)	218, 245, 619, 1755
DpnI	GATC	6 cut(s)	141, 188, 276, 593, 1061, 1295
DpnII	GATC	6 cut(s)	139, 186, 274, 591, 1059, 1293
DraI	TTTAAA	2 cut(s)	786, 853
DraIII	CACNNNGTG	1 cut(s)	1654
EaeI	YGGCCR	2 cut(s)	1233, 1645
EciI	GGCGGA	2 cut(s)	1835, 1970
Eco130I	CCWWGG	1 cut(s)	111
Eco147I	AGGCCT	1 cut(s)	116
Eco24I	GRGCYC	2 cut(s)	1254, 1494
Eco31I	GGTCTC	1 cut(s)	1272
Eco32I	GATATC	1 cut(s)	1741
Eco47I	GGWCC	5 cut(s)	321, 406, 728, 1039, 1525
Eco72I	CACGTG	2 cut(s)	1288, 1521
Eco88I	CYCGRG	1 cut(s)	1547
EcoRII	CCWGG	5 cut(s)	307, 1106, 1140, 1810, 1963
EcoRV	GATATC	1 cut(s)	1741
EcoT14I	CCWWGG	1 cut(s)	111
EcoT38I	GRGCYC	2 cut(s)	1254, 1494
ErhI	CCWWGG	1 cut(s)	111
Esp3I	CGTCTC	2 cut(s)	1311, 1751
FaqI	GGGAC	7 cut(s)	290, 307, 663, 1114, 1538, 1765, 1828
FauI	CCCGC	2 cut(s)	1241, 1742
FblI	GTMKAC	1 cut(s)	1257
FokI	GGATG	6 cut(s)	1090, 1738, 1745, 1858, 1892, 2001
FriOI	GRGCYC	2 cut(s)	1254, 1494
FspBI	CTAG	2 cut(s)	1046, 1673
GlaI	GCGC	6 cut(s)	607, 940, 1571, 1596, 1860, 1875
GsaI	CCCAGC	4 cut(s)	777, 1231, 1980, 1997
GsuI	CTGGAG	1 cut(s)	409
HgaI	GACGC	3 cut(s)	124, 1340, 1880
HhaI	GCGC	6 cut(s)	608, 941, 1572, 1597, 1861, 1876
Hin1I	GRCGYC	1 cut(s)	1320
Hin6I	GCGC	6 cut(s)	606, 939, 1570, 1595, 1859, 1874
HinP1I	GCGC	6 cut(s)	606, 939, 1570, 1595, 1859, 1874
HincII	GTYRAC	1 cut(s)	1800
HindII	GTYRAC	1 cut(s)	1800
HinfI	GANTC	7 cut(s)	6, 68, 916, 1094, 1223, 1927, 1958
HphI	GGTGA	5 cut(s)	430, 1171, 1849, 1861, 1953
Hpy166II	GTNNAC	6 cut(s)	438, 1258, 1342, 1642, 1800, 1950
Hpy188I	TCNGA	7 cut(s)	54, 248, 661, 716, 728, 1934, 2048
Hpy188III	TCNNGA	8 cut(s)	210, 409, 691, 1057, 1063, 1156, 1168, 1723
Hpy8I	GTNNAC	6 cut(s)	438, 1258, 1342, 1642, 1800, 1950
Hpy99I	CGWCG	3 cut(s)	140, 1325, 1334
HpyAV	CCTTC	9 cut(s)	127, 335, 525, 666, 772, 1093, 1192, 1549, 1889
HpyCH4III	ACNGT	3 cut(s)	64, 647, 1828
HpyCH4IV	ACGT	6 cut(s)	1205, 1287, 1320, 1497, 1520, 1764
HpyCH4V	TGCA	9 cut(s)	59, 84, 567, 975, 984, 1404, 1409, 1471, 1984
HpyF10VI	GCNNNNNNNGC	8 cut(s)	936, 965, 981, 1474, 1477, 1981, 1990, 1999
HpyF3I	CTNAG	4 cut(s)	218, 245, 619, 1755
HpySE526I	ACGT	6 cut(s)	1205, 1287, 1320, 1497, 1520, 1764
Hsp92I	GRCGYC	1 cut(s)	1320
HspAI	GCGC	6 cut(s)	606, 939, 1570, 1595, 1859, 1874
Kzo9I	GATC	6 cut(s)	139, 186, 274, 591, 1059, 1293
LmnI	GCTCC	5 cut(s)	207, 1126, 1489, 1535, 1792
Lsp1109I	GCAGC	9 cut(s)	384, 551, 591, 770, 1232, 1455, 1464, 1698, 1996
MaeI	CTAG	2 cut(s)	1046, 1673
MaeII	ACGT	6 cut(s)	1205, 1287, 1320, 1497, 1520, 1764
MaeIII	GTNAC	6 cut(s)	255, 1206, 1383, 1397, 1654, 1959
MalI	GATC	6 cut(s)	141, 188, 276, 593, 1061, 1295
MbiI	CCGCTC	1 cut(s)	1165
MboI	GATC	6 cut(s)	139, 186, 274, 591, 1059, 1293
MboII	GAAGA	8 cut(s)	7, 10, 13, 35, 254, 593, 1005, 1564
MhlI	GDGCHC	3 cut(s)	511, 1254, 1494
MlyI	GAGTC	5 cut(s)	910, 1103, 1217, 1936, 1967
MmeI	TCCRAC	3 cut(s)	353, 706, 1848
MroXI	GAANNNNTTC	1 cut(s)	362
MseI	TTAA	3 cut(s)	785, 852, 900
MslI	CAYNNNNRTG	3 cut(s)	79, 950, 1265
MspA1I	CMGCKG	3 cut(s)	222, 1231, 1245
MvaI	CCWGG	5 cut(s)	309, 1108, 1142, 1812, 1965
MvnI	CGCG	6 cut(s)	606, 1334, 1570, 1597, 1861, 1874
MwoI	GCNNNNNNNGC	8 cut(s)	936, 965, 981, 1474, 1477, 1981, 1990, 1999
NciI	CCSGG	5 cut(s)	1052, 1099, 1275, 1486, 1624
NdeII	GATC	6 cut(s)	139, 186, 274, 591, 1059, 1293
NlaIV	GGNNCC	7 cut(s)	152, 323, 1128, 1252, 1491, 1526, 1537
NmeAIII	GCCGAG	2 cut(s)	1261, 1716
NmuCI	GTSAC	4 cut(s)	255, 1206, 1654, 1959
NspI	RCATGY	4 cut(s)	84, 256, 1348, 1984
NspV	TTCGAA	4 cut(s)	384, 1086, 1350, 1661
OliI	CACNNNNGTG	2 cut(s)	950, 1265
PaeI	GCATGC	1 cut(s)	1984
PagI	TCATGA	1 cut(s)	1167
PaqCI	CACCTGC	1 cut(s)	1978
PceI	AGGCCT	1 cut(s)	116
PciI	ACATGT	2 cut(s)	252, 1344
PcsI	WCGNNNNNNNCGW	2 cut(s)	1317, 1326
PdmI	GAANNNNTTC	1 cut(s)	362
PfeI	GAWTC	2 cut(s)	6, 68
PflFI	GACNNNGTC	1 cut(s)	1052
PfoI	TCCNGGA	2 cut(s)	1097, 1273
PinAI	ACCGGT	1 cut(s)	1036
PleI	GAGTC	5 cut(s)	910, 1102, 1217, 1935, 1966
PmaCI	CACGTG	2 cut(s)	1288, 1521
PmlI	CACGTG	2 cut(s)	1288, 1521
PpsI	GAGTC	5 cut(s)	910, 1102, 1217, 1935, 1966
Ppu21I	YACGTR	2 cut(s)	1288, 1521
PscI	ACATGT	2 cut(s)	252, 1344
Psp6I	CCWGG	5 cut(s)	307, 1106, 1140, 1810, 1963
PspCI	CACGTG	2 cut(s)	1288, 1521
PspFI	CCCAGC	4 cut(s)	773, 1227, 1976, 1993
PspGI	CCWGG	5 cut(s)	307, 1106, 1140, 1810, 1963
PspN4I	GGNNCC	7 cut(s)	152, 323, 1128, 1252, 1491, 1526, 1537
PspOMI	GGGCCC	1 cut(s)	1250
PstNI	CAGNNNCTG	1 cut(s)	1993
PsyI	GACNNNGTC	1 cut(s)	1052
PvuII	CAGCTG	1 cut(s)	1231
RsaI	GTAC	7 cut(s)	91, 242, 740, 1610, 1641, 1943, 1951
RsaNI	GTAC	7 cut(s)	90, 241, 739, 1609, 1640, 1942, 1950
RseI	CAYNNNNRTG	3 cut(s)	79, 950, 1265
SaqAI	TTAA	3 cut(s)	785, 852, 900
Sau3AI	GATC	6 cut(s)	139, 186, 274, 591, 1059, 1293
SchI	GAGTC	5 cut(s)	910, 1103, 1217, 1936, 1967
SduI	GDGCHC	3 cut(s)	511, 1254, 1494
SfuI	TTCGAA	4 cut(s)	384, 1086, 1350, 1661
SinI	GGWCC	5 cut(s)	321, 406, 728, 1039, 1525
SmiI	ATTTAAAT	1 cut(s)	786
SmiMI	CAYNNNNRTG	3 cut(s)	79, 950, 1265
SphI	GCATGC	1 cut(s)	1984
SseBI	AGGCCT	1 cut(s)	116
SspMI	CTAG	2 cut(s)	1046, 1673
StuI	AGGCCT	1 cut(s)	116
StyI	CCWWGG	1 cut(s)	111
SwaI	ATTTAAAT	1 cut(s)	786
TaaI	ACNGT	3 cut(s)	64, 647, 1828
TaiI	ACGT	6 cut(s)	1208, 1290, 1323, 1500, 1523, 1767
TaqII	GACCGA	1 cut(s)	394
TatI	WGTACW	1 cut(s)	89
TauI	GCSGC	7 cut(s)	225, 1165, 1202, 1245, 1337, 1749, 1810
TfiI	GAWTC	2 cut(s)	6, 68
Tru1I	TTAA	3 cut(s)	785, 852, 900
Tru9I	TTAA	3 cut(s)	785, 852, 900
TscAI	CASTG	2 cut(s)	69, 2032
TseFI	GTSAC	4 cut(s)	255, 1206, 1654, 1959
TseI	GCWGC	9 cut(s)	372, 564, 579, 758, 1245, 1468, 1477, 1711, 1984
Tsp45I	GTSAC	4 cut(s)	255, 1206, 1654, 1959
TspDTI	ATGAA	6 cut(s)	656, 754, 758, 952, 1184, 1429
TspGWI	ACGGA	1 cut(s)	1775
TspRI	CASTG	2 cut(s)	69, 2032
Tth111I	GACNNNGTC	1 cut(s)	1052
VpaK11BI	GGWCC	5 cut(s)	321, 406, 728, 1039, 1525
XapI	RAATTY	4 cut(s)	686, 746, 1681, 1717
XceI	RCATGY	4 cut(s)	84, 256, 1348, 1984
XcmI	CCANNNNNNNNNTGG	2 cut(s)	315, 2032
XmiI	GTMKAC	1 cut(s)	1257
XmnI	GAANNNNTTC	1 cut(s)	362
XspI	CTAG	2 cut(s)	1046, 1673
ZraI	GACGTC	1 cut(s)	1321

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.