Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0008814

Physical Location & Seq

Genomic Coordinates Forward (+)

7205729 .. 7210311

Gene Structure 4583 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG082200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGAGATTCATCATCTTCTTCTTCTTTGGGTTTTTTCTGCTTCTTCCGGTTCTTATTGCAACAGTGGAATCTACATCAACATGCATTAGTACAGACCAAGAACAAGTCTCCAAGGCCTTCAAATCAGTCCAAAGCTTCAATCTTTCTTGGTTCCAAAATCAAACTCCCAACTGCTCAAACCCACCGATCACAGAGATCAAGCTCCATTCCAGAAACCTTAGCGGCACAGTCTCATGGAAGTACCTCAGAAACATGTCACATCTTCAAAACCTCGATCTGTCAAACAATTCTCTTAAAGGCTCTGTCCCAGGCTGGTTCTGGTCCCTTCCAACCTTACTCGAAGTCAATCTCTCCAAGAACAAGTTCGGCGGCAGCCTCGGGTTCGAAAGCGGTTCAGTTTCCTCAGTCCAGAAGCTCAATCTCTCCAGCAACAGGTTCACCAACTCTGTTCTGCTCTCTGGTTTTCCACACCTCAAAATCCTCGACCTTTCTCACAACAACTTGGGTGCTCTGCCTTCTGGTCTTGCCAATCTCACTAACCTCCACCACCTCGACATTTCGAGCTGCAAAATCTCTGGCAGCTCGAAACCCATCTCTTTTCTTCGCACATTGACCTACTTAGATGTCTCAAACAACTCCATGAACGGTTCTTTCCCTTCGGATTTTCCCCCCATTAGTCCCCTCAAATTCTTGAACATTTCGTTCAATAATTTCAGGGGTATAGTCGGACCAGAAAAGTACCAAAAATTTGGCAAAGCAGCTTTCATTCATGCCGGGAAGGATTTAAATCTTACATCTTTCAATGCTTCCAATTCCAAATCCCCAACCTCTCACTCTCCACCACCACATTTTAAATCCCCAATTCAAAAACCTAAACCCCTCCCAAAACCCTCCACCCTTAAAAAACCCAAATCTTCAAAACCCAAAAGGACTCTCATTATCAGCCTATCTTGTGCCTCCACATTTGTGCTTGCTTTCATAGCGATCTGCTTAGCTTGCAGATACAGAAGAAAGCAATTTGCCAAGAAACACAAATGGGCCATCTCCAAACCGGTCCAGCTCGACCGGGTCAGGATCGAGAAGTCCGGCCCGTTCTCCTTCGAAACCGAGTCCGGGACATCCTGGGTCGCCGACATCAAGGAGCCAACTTCCGCTCAGGTCGTCATGTTCGAGAAGCCGCTCATGAACTACCTCACCTTCAAAGACCTCATCGCCGCCACGTCACACTTCGGCAAAGACTCCCAGCTAGCCGAGGGCCGCTGCGGGCCCGTCTACACCGCCATGCTTCCCGGAGACCTCCACGTGGCGATCAAGGTCTTGGAAAACGCCAGAGACGTCGAACACGACGCGGCGGCGGACATGTTCGAAAACCTGTCGAAGTTGAAACACCCGAACTTGTTGCCTGTCTCCGGTTACTGCATTGCAGGGAAAGAGAAGCTGGTGTTGTATGAGTTCATGGCGAACGGGGATTTACACAGGTGGCTGCACGAGCTGCCAACCGGGGAGCCCAACGTGGAGGATTGGAGTGCCGACACGTGGGACCAGAGTGGAGCCTACTCGCCCGAGAAGAAGGGTTGGCTCACGCGCCACCGCATTGCGGTTGGCATAGCGCGTGGGCTGGCGTACCTCCACCATGCCGGGTCGAAGCCGGTGGTACACGGCCACCTTGTGACTTCGAACATATTGCTCGGGGCGAATTTCGAGCCGAGAATTGCCGATTTCGGGCTGCGGAATTTCGGGATGAGGGATGGAGACATCGGCGGCGGGACTGAGACGGACGTGTATTGTTTTGGGGTGGTGTTGATGGAGCTGTTGACGGGGCGGCCCGGGACGGCGGAGACGGTGGTGTGGGTGAGGAGGATGGTGAGGGAGGCGCGTGGGGTGGACGCGCTGGATGAGAGGTTGAGGGAAGGTGGGGATTTGGAGAGGGAGATGGTGGAGAGTCTCCGAGTTGGGTACTTGTGTACAGCGGAGTCACCTGGGAAAAGGCCCAGCATGCAGCAGGTGCTGGGTTTGCTCAAAGACCTACATCCCAGTTCCACTGCCACTCTGGGCTTTGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005516 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009625 GO:0009628 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010033 GO:0010154 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0036211 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046777 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0061458 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_6 LRR_8 Pkinase_Tyr

Protein Analysis

687

Amino Acids

75.98

Weight (kDa)

9.33

Isoelectric Point (pI)

32.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	65 - 122	1.1e-08	Leucine rich repeat
LRR_8	PF13855	135 - 191	3.4e-06	Leucine rich repeat
LRR_4	PF12799	156 - 192	1e-06	Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr	PF07714	413 - 578	1.3e-21	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	413 - 577	4.3e-13	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45800 AT5G45800
fragaria_vesca	FvH4_3g07560 FvH4_3g07560
malus_domestica	MD05G1298700.v1.1 MD10G1278000.v1.1
prunus_persica	Prupe.4G063700_v2.0.a1
pyrus_communis	pycom05g27650 pycom10g23200
rosa_chinensis	RchiOBHm_Chr5g0011151
rosa_laevigata	RLG00000031815
rosa_multiflora	Rmu_co8285897.1_g000001 Rmu_sc0002990.1_g000016 Rmu_sc0003242.1_g000021 Rmu_sc0030140.1_g000001
rosa_roxburghii	Rroxscaffold_1G00065240
rosa_rugosa	Rorug04G0455400
rosa_samantha	Rh5AG087700 Rh5BG082400 Rh5CG095400 Rh5DG082200
rosa_wichuraiana	Rw0G000210 Rw5G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1993
AatII	GACGTC	1 cut(s)	1338
Acc36I	ACCTGC	1 cut(s)	1993
AccBSI	CCGCTC	2 cut(s)	1154, 1180
AccI	GTMKAC	1 cut(s)	1272
AccII	CGCG	5 cut(s)	1349, 1585, 1612, 1876, 1889
AclWI	GGATC	1 cut(s)	1082
AcoI	YGGCCR	1 cut(s)	1660
AcsI	RAATTY	4 cut(s)	686, 746, 1696, 1732
AcvI	CACGTG	2 cut(s)	1303, 1536
AcyI	GRCGYC	1 cut(s)	1335
AdeI	CACNNNGTG	1 cut(s)	1669
AfaI	GTAC	7 cut(s)	91, 242, 740, 1625, 1656, 1958, 1966
AfiI	CCNNNNNNNGG	7 cut(s)	432, 1113, 1303, 1409, 1536, 1597, 1722
AflIII	ACRYGT	4 cut(s)	252, 1359, 1533, 1779
AgeI	ACCGGT	1 cut(s)	1051
AjiI	CACGTC	2 cut(s)	1221, 1780
AjnI	CCWGG	3 cut(s)	307, 1121, 1978
AjuI	GAANNNNNNNTTGG	2 cut(s)	347, 379
AleI	CACNNNNGTG	1 cut(s)	965
Alw21I	GWGCWC	1 cut(s)	511
AlwI	GGATC	1 cut(s)	1082
AlwNI	CAGNNNCTG	1 cut(s)	2008
Ama87I	CYCGRG	4 cut(s)	377, 1562, 1688, 1826
AoxI	GGCC	8 cut(s)	114, 1038, 1087, 1255, 1265, 1660, 1823, 1988
ApaI	GGGCCC	1 cut(s)	1269
ApeKI	GCWGC	9 cut(s)	372, 564, 579, 758, 1260, 1483, 1492, 1726, 1999
ApoI	RAATTY	4 cut(s)	686, 746, 1696, 1732
AsiGI	ACCGGT	1 cut(s)	1051
Asp700I	GAANNNNTTC	1 cut(s)	362
AspLEI	GCGC	4 cut(s)	1587, 1612, 1876, 1891
AsuC2I	CCSGG	8 cut(s)	775, 1067, 1114, 1290, 1501, 1639, 1827, 1828
AsuHPI	GGTGA	5 cut(s)	430, 1186, 1864, 1876, 1968
AsuII	TTCGAA	4 cut(s)	384, 1101, 1365, 1676
AsuNHI	GCTAGC	1 cut(s)	1246
AvaI	CYCGRG	4 cut(s)	377, 1562, 1688, 1826
AvaII	GGWCC	4 cut(s)	321, 728, 1054, 1540
BaeGI	GKGCMC	1 cut(s)	1269
BaeI	ACNNNNGTAYC	2 cut(s)	1948, 1981
BanII	GRGCYC	2 cut(s)	1269, 1509
BauI	CACGAG	1 cut(s)	1487
BbrPI	CACGTG	2 cut(s)	1303, 1536
Bbv12I	GWGCWC	1 cut(s)	511
BbvI	GCAGC	9 cut(s)	384, 551, 591, 770, 1247, 1470, 1479, 1713, 2011
BccI	CCATC	6 cut(s)	599, 1049, 1742, 1798, 1855, 1927
BceAI	ACGGC	2 cut(s)	1675, 1848
BcgI	CGANNNNNNTGC	4 cut(s)	1381, 1415, 1666, 1700
BciT130I	CCWGG	3 cut(s)	309, 1123, 1980
BcnI	CCSGG	8 cut(s)	775, 1067, 1114, 1290, 1501, 1639, 1827, 1828
BfaI	CTAG	1 cut(s)	1247
BfuAI	ACCTGC	1 cut(s)	1993
BlpI	GCTNAGC	1 cut(s)	991
Bme18I	GGWCC	4 cut(s)	321, 728, 1054, 1540
BmeT110I	CYCGRG	4 cut(s)	377, 1562, 1688, 1826
BmgBI	CACGTC	2 cut(s)	1221, 1780
BmiI	GGNNCC	7 cut(s)	152, 323, 1143, 1267, 1506, 1541, 1552
BmrI	ACTGGG	1 cut(s)	2028
BmtI	GCTAGC	1 cut(s)	1250
BmuI	ACTGGG	1 cut(s)	2028
BpmI	CTGGAG	1 cut(s)	409
Bpu10I	CCTNAGC	2 cut(s)	218, 1155
Bpu1102I	GCTNAGC	1 cut(s)	991
Bpu14I	TTCGAA	4 cut(s)	384, 1101, 1365, 1676
BpuMI	CCSGG	8 cut(s)	775, 1067, 1114, 1290, 1501, 1639, 1827, 1828
BsaAI	YACGTR	2 cut(s)	1303, 1536
BsaBI	GATNNNNATC	1 cut(s)	786
BsaHI	GRCGYC	1 cut(s)	1335
BsaI	GGTCTC	1 cut(s)	1287
BsaJI	CCNNGG	8 cut(s)	111, 307, 376, 1122, 1251, 1500, 1826, 1979
BsaWI	WCCGGW	3 cut(s)	46, 1051, 1409
Bsc4I	CCNNNNNNNGG	7 cut(s)	432, 1113, 1303, 1409, 1536, 1597, 1722
Bse118I	RCCGGY	2 cut(s)	1051, 1648
Bse1I	ACTGG	1 cut(s)	2034
Bse3DI	GCAATG	2 cut(s)	1419, 1593
Bse8I	GATNNNNATC	1 cut(s)	786
BseBI	CCWGG	3 cut(s)	309, 1123, 1980
BseDI	CCNNGG	8 cut(s)	111, 307, 376, 1122, 1251, 1500, 1826, 1979
BseGI	GGATG	6 cut(s)	1118, 1746, 1753, 1866, 1900, 2029
BseJI	GATNNNNATC	1 cut(s)	786
BseLI	CCNNNNNNNGG	7 cut(s)	432, 1113, 1303, 1409, 1536, 1597, 1722
BseMI	GCAATG	2 cut(s)	1419, 1593
BseMII	CTCAG	4 cut(s)	259, 417, 1169, 1761
BseNI	ACTGG	1 cut(s)	2034
BseRI	GAGGAG	1 cut(s)	1870
BseSI	GKGCMC	1 cut(s)	1269
BseXI	GCAGC	9 cut(s)	384, 551, 591, 770, 1247, 1470, 1479, 1713, 2011
BseYI	CCCAGC	3 cut(s)	1242, 1991, 2008
BsgI	GTGCAG	1 cut(s)	1469
Bsh1236I	CGCG	5 cut(s)	1349, 1585, 1612, 1876, 1889
Bsh1285I	CGRYCG	1 cut(s)	1066
BshFI	GGCC	8 cut(s)	116, 1040, 1089, 1257, 1267, 1662, 1825, 1990
BshTI	ACCGGT	1 cut(s)	1051
BsiEI	CGRYCG	1 cut(s)	1066
BsiHKAI	GWGCWC	1 cut(s)	511
BsiHKCI	CYCGRG	4 cut(s)	377, 1562, 1688, 1826
BslFI	GGGAC	7 cut(s)	290, 307, 663, 1129, 1553, 1780, 1843
BslI	CCNNNNNNNGG	7 cut(s)	432, 1113, 1303, 1409, 1536, 1597, 1722
BsmBI	CGTCTC	3 cut(s)	1326, 1766, 1832
BsmFI	GGGAC	7 cut(s)	290, 307, 663, 1129, 1553, 1780, 1843
BsnI	GGCC	8 cut(s)	116, 1040, 1089, 1257, 1267, 1662, 1825, 1990
Bso31I	GGTCTC	1 cut(s)	1287
BsoBI	CYCGRG	4 cut(s)	377, 1562, 1688, 1826
Bsp119I	TTCGAA	4 cut(s)	384, 1101, 1365, 1676
Bsp120I	GGGCCC	1 cut(s)	1265
Bsp1286I	GDGCHC	3 cut(s)	511, 1269, 1509
Bsp1407I	TGTACA	1 cut(s)	1964
Bsp143I	GATC	6 cut(s)	186, 195, 274, 984, 1074, 1308
Bsp1720I	GCTNAGC	1 cut(s)	991
BspANI	GGCC	8 cut(s)	116, 1040, 1089, 1257, 1267, 1662, 1825, 1990
BspCNI	CTCAG	4 cut(s)	258, 416, 1168, 1762
BspFNI	CGCG	5 cut(s)	1349, 1585, 1612, 1876, 1889
BspHI	TCATGA	1 cut(s)	1182
BspLI	GGNNCC	7 cut(s)	152, 323, 1143, 1267, 1506, 1541, 1552
BspMI	ACCTGC	1 cut(s)	1993
BspOI	GCTAGC	1 cut(s)	1250
BspPI	GGATC	1 cut(s)	1082
BspT104I	TTCGAA	4 cut(s)	384, 1101, 1365, 1676
BspTNI	GGTCTC	1 cut(s)	1287
BsrBI	CCGCTC	2 cut(s)	1154, 1180
BsrDI	GCAATG	2 cut(s)	1419, 1593
BsrFI	RCCGGY	2 cut(s)	1051, 1648
BsrGI	TGTACA	1 cut(s)	1964
BsrI	ACTGG	1 cut(s)	2034
BssAI	RCCGGY	2 cut(s)	1051, 1648
BssECI	CCNNGG	8 cut(s)	111, 307, 376, 1122, 1251, 1500, 1826, 1979
BssMI	GATC	6 cut(s)	186, 195, 274, 984, 1074, 1308
BssNI	GRCGYC	1 cut(s)	1335
BssSI	CACGAG	1 cut(s)	1487
BssT1I	CCWWGG	1 cut(s)	111
Bst2BI	CACGAG	1 cut(s)	1487
Bst2UI	CCWGG	3 cut(s)	309, 1123, 1980
Bst4CI	ACNGT	4 cut(s)	64, 229, 647, 1843
BstACI	GRCGYC	1 cut(s)	1335
BstAPI	GCANNNNNTGC	2 cut(s)	1492, 2005
BstAUI	TGTACA	1 cut(s)	1964
BstBAI	YACGTR	2 cut(s)	1303, 1536
BstBI	TTCGAA	4 cut(s)	384, 1101, 1365, 1676
BstC8I	GCNNGC	6 cut(s)	972, 997, 1248, 1265, 1620, 1997
BstDEI	CTNAG	7 cut(s)	218, 245, 403, 619, 991, 1155, 1770
BstF5I	GGATG	6 cut(s)	1118, 1746, 1753, 1866, 1900, 2029
BstFNI	CGCG	5 cut(s)	1349, 1585, 1612, 1876, 1889
BstHHI	GCGC	4 cut(s)	1587, 1612, 1876, 1891
BstKTI	GATC	6 cut(s)	189, 198, 277, 987, 1077, 1311
BstMBI	GATC	6 cut(s)	186, 195, 274, 984, 1074, 1308
BstMCI	CGRYCG	1 cut(s)	1066
BstMWI	GCNNNNNNNGC	7 cut(s)	980, 996, 1489, 1492, 1996, 2005, 2014
BstNI	CCWGG	3 cut(s)	309, 1123, 1980
BstNSI	RCATGY	4 cut(s)	84, 256, 1363, 1999
BstSLI	GKGCMC	1 cut(s)	1269
BstUI	CGCG	5 cut(s)	1349, 1585, 1612, 1876, 1889
BstV1I	GCAGC	9 cut(s)	384, 551, 591, 770, 1247, 1470, 1479, 1713, 2011
BstXI	CCANNNNNNTGG	1 cut(s)	749
BsuRI	GGCC	8 cut(s)	116, 1040, 1089, 1257, 1267, 1662, 1825, 1990
BtgZI	GCGATG	1 cut(s)	1195
BtrI	CACGTC	2 cut(s)	1221, 1780
BtsCI	GGATG	6 cut(s)	1118, 1746, 1753, 1866, 1900, 2029
BtsI	GCAGTG	1 cut(s)	2040
BtsIMutI	CAGTG	2 cut(s)	69, 2040
BveI	ACCTGC	1 cut(s)	1993
Cac8I	GCNNGC	6 cut(s)	972, 997, 1248, 1265, 1620, 1997
CaiI	CAGNNNCTG	1 cut(s)	2008
CciI	TCATGA	1 cut(s)	1182
CfoI	GCGC	4 cut(s)	1587, 1612, 1876, 1891
Cfr10I	RCCGGY	2 cut(s)	1051, 1648
Cfr9I	CCCGGG	1 cut(s)	1826
CseI	GACGC	2 cut(s)	1355, 1895
Csp6I	GTAC	7 cut(s)	90, 241, 739, 1624, 1655, 1957, 1965
CspAI	ACCGGT	1 cut(s)	1051
CviQI	GTAC	7 cut(s)	90, 241, 739, 1624, 1655, 1957, 1965
DdeI	CTNAG	7 cut(s)	218, 245, 403, 619, 991, 1155, 1770
DpnI	GATC	6 cut(s)	188, 197, 276, 986, 1076, 1310
DpnII	GATC	6 cut(s)	186, 195, 274, 984, 1074, 1308
DraI	TTTAAA	2 cut(s)	786, 853
DraIII	CACNNNGTG	1 cut(s)	1669
EaeI	YGGCCR	1 cut(s)	1660
EciI	GGCGGA	2 cut(s)	1370, 1850
Eco130I	CCWWGG	1 cut(s)	111
Eco147I	AGGCCT	1 cut(s)	116
Eco24I	GRGCYC	2 cut(s)	1269, 1509
Eco31I	GGTCTC	1 cut(s)	1287
Eco47I	GGWCC	4 cut(s)	321, 728, 1054, 1540
Eco72I	CACGTG	2 cut(s)	1303, 1536
Eco88I	CYCGRG	4 cut(s)	377, 1562, 1688, 1826
EcoRII	CCWGG	3 cut(s)	307, 1121, 1978
EcoT14I	CCWWGG	1 cut(s)	111
EcoT22I	ATGCAT	1 cut(s)	86
EcoT38I	GRGCYC	2 cut(s)	1269, 1509
ErhI	CCWWGG	1 cut(s)	111
Esp3I	CGTCTC	3 cut(s)	1326, 1766, 1832
FaqI	GGGAC	7 cut(s)	290, 307, 663, 1129, 1553, 1780, 1843
FauI	CCCGC	2 cut(s)	1256, 1757
FblI	GTMKAC	1 cut(s)	1272
FokI	GGATG	6 cut(s)	1105, 1753, 1760, 1873, 1907, 2016
FriOI	GRGCYC	2 cut(s)	1269, 1509
FspBI	CTAG	1 cut(s)	1247
GlaI	GCGC	4 cut(s)	1586, 1611, 1875, 1890
GsaI	CCCAGC	3 cut(s)	1246, 1995, 2012
GsuI	CTGGAG	1 cut(s)	409
HaeIII	GGCC	8 cut(s)	116, 1040, 1089, 1257, 1267, 1662, 1825, 1990
HgaI	GACGC	2 cut(s)	1355, 1895
HhaI	GCGC	4 cut(s)	1587, 1612, 1876, 1891
Hin1I	GRCGYC	1 cut(s)	1335
Hin6I	GCGC	4 cut(s)	1585, 1610, 1874, 1889
HinP1I	GCGC	4 cut(s)	1585, 1610, 1874, 1889
HincII	GTYRAC	1 cut(s)	1815
HindII	GTYRAC	1 cut(s)	1815
HindIII	AAGCTT	1 cut(s)	133
HinfI	GANTC	7 cut(s)	6, 68, 931, 1109, 1238, 1942, 1973
HphI	GGTGA	5 cut(s)	430, 1186, 1864, 1876, 1968
Hpy166II	GTNNAC	6 cut(s)	438, 1273, 1657, 1815, 1885, 1965
Hpy188I	TCNGA	5 cut(s)	248, 661, 728, 1949, 2063
Hpy188III	TCNNGA	8 cut(s)	210, 409, 691, 1072, 1078, 1171, 1183, 1738
Hpy8I	GTNNAC	6 cut(s)	438, 1273, 1657, 1815, 1885, 1965
Hpy99I	CGWCG	2 cut(s)	1340, 1349
HpyAV	CCTTC	9 cut(s)	127, 335, 525, 666, 772, 1108, 1207, 1564, 1904
HpyCH4III	ACNGT	4 cut(s)	64, 229, 647, 1843
HpyCH4IV	ACGT	6 cut(s)	1220, 1302, 1335, 1512, 1535, 1779
HpyCH4V	TGCA	8 cut(s)	59, 84, 567, 999, 1419, 1424, 1486, 1999
HpyF10VI	GCNNNNNNNGC	7 cut(s)	980, 996, 1489, 1492, 1996, 2005, 2014
HpyF3I	CTNAG	7 cut(s)	218, 245, 403, 619, 991, 1155, 1770
HpySE526I	ACGT	6 cut(s)	1220, 1302, 1335, 1512, 1535, 1779
Hsp92I	GRCGYC	1 cut(s)	1335
HspAI	GCGC	4 cut(s)	1585, 1610, 1874, 1889
Kzo9I	GATC	6 cut(s)	186, 195, 274, 984, 1074, 1308
LmnI	GCTCC	5 cut(s)	207, 1141, 1504, 1550, 1807
Lsp1109I	GCAGC	9 cut(s)	384, 551, 591, 770, 1247, 1470, 1479, 1713, 2011
MaeI	CTAG	1 cut(s)	1247
MaeII	ACGT	6 cut(s)	1220, 1302, 1335, 1512, 1535, 1779
MaeIII	GTNAC	5 cut(s)	255, 1221, 1412, 1669, 1974
MalI	GATC	6 cut(s)	188, 197, 276, 986, 1076, 1310
MbiI	CCGCTC	2 cut(s)	1154, 1180
MboI	GATC	6 cut(s)	186, 195, 274, 984, 1074, 1308
MboII	GAAGA	9 cut(s)	7, 10, 13, 35, 254, 593, 906, 1020, 1579
MhlI	GDGCHC	3 cut(s)	511, 1269, 1509
MlyI	GAGTC	5 cut(s)	925, 1118, 1232, 1951, 1982
MmeI	TCCRAC	2 cut(s)	353, 706
Mph1103I	ATGCAT	1 cut(s)	86
MroXI	GAANNNNTTC	1 cut(s)	362
MseI	TTAA	4 cut(s)	294, 785, 852, 900
MslI	CAYNNNNRTG	3 cut(s)	79, 965, 1280
MspA1I	CMGCKG	2 cut(s)	1260, 1970
MvaI	CCWGG	3 cut(s)	309, 1123, 1980
MvnI	CGCG	5 cut(s)	1349, 1585, 1612, 1876, 1889
MwoI	GCNNNNNNNGC	7 cut(s)	980, 996, 1489, 1492, 1996, 2005, 2014
NciI	CCSGG	8 cut(s)	775, 1067, 1114, 1290, 1501, 1639, 1827, 1828
NdeII	GATC	6 cut(s)	186, 195, 274, 984, 1074, 1308
NheI	GCTAGC	1 cut(s)	1246
NlaIV	GGNNCC	7 cut(s)	152, 323, 1143, 1267, 1506, 1541, 1552
NmeAIII	GCCGAG	2 cut(s)	1276, 1731
NmuCI	GTSAC	4 cut(s)	255, 1221, 1669, 1974
NsiI	ATGCAT	1 cut(s)	86
NspI	RCATGY	4 cut(s)	84, 256, 1363, 1999
NspV	TTCGAA	4 cut(s)	384, 1101, 1365, 1676
OliI	CACNNNNGTG	1 cut(s)	965
PaeI	GCATGC	1 cut(s)	1999
PagI	TCATGA	1 cut(s)	1182
PaqCI	CACCTGC	1 cut(s)	1993
PceI	AGGCCT	1 cut(s)	116
PciI	ACATGT	2 cut(s)	252, 1359
PcsI	WCGNNNNNNNCGW	3 cut(s)	1167, 1332, 1341
PdmI	GAANNNNTTC	1 cut(s)	362
PfeI	GAWTC	2 cut(s)	6, 68
PflFI	GACNNNGTC	1 cut(s)	1067
PfoI	TCCNGGA	2 cut(s)	1112, 1288
PinAI	ACCGGT	1 cut(s)	1051
PleI	GAGTC	5 cut(s)	925, 1117, 1232, 1950, 1981
PmaCI	CACGTG	2 cut(s)	1303, 1536
PmlI	CACGTG	2 cut(s)	1303, 1536
PpsI	GAGTC	5 cut(s)	925, 1117, 1232, 1950, 1981
Ppu21I	YACGTR	2 cut(s)	1303, 1536
PscI	ACATGT	2 cut(s)	252, 1359
Psp6I	CCWGG	3 cut(s)	307, 1121, 1978
PspCI	CACGTG	2 cut(s)	1303, 1536
PspFI	CCCAGC	3 cut(s)	1242, 1991, 2008
PspGI	CCWGG	3 cut(s)	307, 1121, 1978
PspN4I	GGNNCC	7 cut(s)	152, 323, 1143, 1267, 1506, 1541, 1552
PspOMI	GGGCCC	1 cut(s)	1265
PstNI	CAGNNNCTG	1 cut(s)	2008
PsyI	GACNNNGTC	1 cut(s)	1067
RsaI	GTAC	7 cut(s)	91, 242, 740, 1625, 1656, 1958, 1966
RsaNI	GTAC	7 cut(s)	90, 241, 739, 1624, 1655, 1957, 1965
RseI	CAYNNNNRTG	3 cut(s)	79, 965, 1280
SaqAI	TTAA	4 cut(s)	294, 785, 852, 900
Sau3AI	GATC	6 cut(s)	186, 195, 274, 984, 1074, 1308
SchI	GAGTC	5 cut(s)	925, 1118, 1232, 1951, 1982
SduI	GDGCHC	3 cut(s)	511, 1269, 1509
SfuI	TTCGAA	4 cut(s)	384, 1101, 1365, 1676
SinI	GGWCC	4 cut(s)	321, 728, 1054, 1540
SmaI	CCCGGG	1 cut(s)	1828
SmiI	ATTTAAAT	1 cut(s)	786
SmiMI	CAYNNNNRTG	3 cut(s)	79, 965, 1280
SphI	GCATGC	1 cut(s)	1999
SseBI	AGGCCT	1 cut(s)	116
SspMI	CTAG	1 cut(s)	1247
StuI	AGGCCT	1 cut(s)	116
StyI	CCWWGG	1 cut(s)	111
SwaI	ATTTAAAT	1 cut(s)	786
TaaI	ACNGT	4 cut(s)	64, 229, 647, 1843
TaiI	ACGT	6 cut(s)	1223, 1305, 1338, 1515, 1538, 1782
TatI	WGTACW	2 cut(s)	89, 1964
TauI	GCSGC	9 cut(s)	225, 372, 1180, 1217, 1260, 1352, 1355, 1764, 1825
TfiI	GAWTC	2 cut(s)	6, 68
Tru1I	TTAA	4 cut(s)	294, 785, 852, 900
Tru9I	TTAA	4 cut(s)	294, 785, 852, 900
TscAI	CASTG	2 cut(s)	69, 2047
TseFI	GTSAC	4 cut(s)	255, 1221, 1669, 1974
TseI	GCWGC	9 cut(s)	372, 564, 579, 758, 1260, 1483, 1492, 1726, 1999
Tsp45I	GTSAC	4 cut(s)	255, 1221, 1669, 1974
TspDTI	ATGAA	6 cut(s)	656, 754, 758, 967, 1199, 1444
TspGWI	ACGGA	1 cut(s)	1790
TspMI	CCCGGG	1 cut(s)	1826
TspRI	CASTG	2 cut(s)	69, 2047
Tth111I	GACNNNGTC	1 cut(s)	1067
VpaK11BI	GGWCC	4 cut(s)	321, 728, 1054, 1540
XapI	RAATTY	4 cut(s)	686, 746, 1696, 1732
XceI	RCATGY	4 cut(s)	84, 256, 1363, 1999
XcmI	CCANNNNNNNNNTGG	2 cut(s)	315, 2047
XmaI	CCCGGG	1 cut(s)	1826
XmiI	GTMKAC	1 cut(s)	1272
XmnI	GAANNNNTTC	1 cut(s)	362
XspI	CTAG	1 cut(s)	1247
ZraI	GACGTC	1 cut(s)	1336
Zsp2I	ATGCAT	1 cut(s)	86

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.