Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0002991

Physical Location & Seq

Genomic Coordinates Reverse (-)

2107354 .. 2111993

Gene Structure 4640 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1017300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGCTAGCTCTTGGTCTCAGTGTCCGCCTTTCGAGTTTTCGAGCAAGTACTATCACGTGGCCGGAGACGGAGGTGGCTGTGTGAGGCAAAGCAGCTTCTTTGGAGGCAAACCAGTGCTTAATCAGGGCGTAGGGTATTCTGTTATTCTTGGCTTTGGAGCCTTCTTTGCTGTCTTCACATCTTTCTTGGTATGGCTGGAGAAGCGATATGTTGGTTCCAAGCACACATCCGAATGGTTCAACACTGCAGGAAGAAGTGTTAAAACAGGACTCATTGCCAGTGTGATTGTCTCCCAGTGGACTTGGGCTGCTACAATCTTGCAAAGTTCAAATGTTGCTTGGGAGTATGGAGTAAGTGGACCTTTCTGGTATGCTAGCGGCGCTACTATACAGGTACTCTTGTTTGGTATAATAGCCATAGAGATCAAGAGAAAGGCTCCTCATGCTCACACTGTATGTGAAATCGTGAAAGCTCGCTGGGGCACAGCGGCACACATTGTCTTCCTCAGTTTCTGCTTTTTGACAAATATTATTGTAACTGCAATGCTGCTGCTCGGAGGTTCTGCTGTCGTAAATGCACTTACAGGAGTAAACATTTATGCTGCTAGCTTCCTTATCCCTCTTGGAGTAATCGTCTACACATTAGCTGGAGGACTAAAAGCGACGTTCTTGGCAAGCTACATCCATTCTGTTATTGTTCACGTGGTACTAGTCATATTTGTATACCTTGTGTATACGGCAAGCAGTGAGCTTGGTAGCCCTAGCATCGTGTACAACCGCCTTGTAGAGGTAGCGAGTAAATCAAGGATTTGTAAGGAGCCAATTTCTCATCACGGCCAGTCTTGTGGTCCTGCGAGTGGGAATTACAAAGGGTCGTACCTAACAATGTTGAGTTCTGGAGGACTAGTCTTTGGGATTATCAACATCGTCGGAAACTTTGGCACTGTTTTTGTTGATAATGGATACTGGGTAAGCGCCATAGCTGCACGGCCTTCGTCAACTCACAAGGGCTACTTGTTAGGTGGGCTTGTTTGGTTTGCAGTCCCATTTTCTTTGGCGACATCATTGGGACTGGGAGCACTGGCCCTTGATCTACCACTAACCGAAAGTGAAGCAAGTCGGGGACTTGTTCCTCCTGCCACCGCTATAGCTTTGATGGGAAAAGGAGGATCTGTTCTTCTTCTTACTATGCTTTTCATGGCAGTGACTTCTGCTGGTTCATCAGAGCTTATAGCAGTATCCTCATTATGCACTTATGATATCTACCGCACGTACGTAGATCCAAATGCAGACGGAAAGAAAATCCTCAAGGTATCAAGGGGTGTGATCCTTGCTTTCGGTTGTTTTATGGGGCTGCTAGCAGTGATACTGAATAAAGCTGGAGTTTCATTAGGTTGGATGTATCTGGCAATGGGAGTGCTCATCGGTTCAGCAGTTATTCCCATCGCGTTCATGCTTCTATGGAGAAAGGCAAACGCAATCGGTGCAATCCTAGGAGCAACTGTTGGCTGCGTTCTTGGGATCATCACATGGCTATCGGTCACGAAAATTGAGTATGGCCGCATAAATCTGGACACAACAGGTCGAAATGCACCAATGCTTGCAGGAAACCTCGTCTCTATACTTAGTGGTGGAGCCATACATGCTATCTGCAGCTTCTTGTCACCACAAAACTACGACTGGGGTACCACTAAGAAGATCACCGTGGTTGAGAAGGCAACGAGTGATCTTCCGGCAGAAGAGTACAAGGAAGAAAAATTACAGAGAGCAAAGGCATGGATAGTGAAATGGGGTGTTGGCTTTACTGTTGTGATCGTTTTACTGTGGCCCCTTCTCTCTCTTCCAGCAGGTGATTTCGGTATAGGGTACTTCACATTCTGGGCGGTCATTGCAATAGCATGGGGCACAATCGGTTCAGTTGCAATCATCGCTTTACCGGTAATAGAAAGCTGGGAAACAATCCAGAGCGTAATTCTGGGAATGTTTACAAATGACAGGCTCATGGAGAAGGTTGAAGAAATGAATCTGAAGCTGCACACAATCATGTTGGCCATACCGGAATCGGAGAAGATTTACTTGCTTGAGAAGGAGAAGGCTAAAAAGAAAGAAGCATTGGAGCAAGGAAGCCACTCTCTTTCTGCTGTGGAACAACCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006995 GO:0007154 GO:0008150 GO:0008324 GO:0008519 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0015075 GO:0015101 GO:0015203 GO:0015204 GO:0015291 GO:0015293 GO:0015489 GO:0015606 GO:0015695 GO:0015696 GO:0015840 GO:0015846 GO:0015847 GO:0015848 GO:0016020 GO:0016021 GO:0019755 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034220 GO:0042594 GO:0042886 GO:0042887 GO:0043562 GO:0044425 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0071496 GO:0071702 GO:0071705 GO:0071918 GO:0071944 GO:0072488 GO:0098655 GO:1902047 GO:1903711

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SSF

Protein Analysis

719

Amino Acids

76.95

Weight (kDa)

8.91

Isoelectric Point (pI)

32.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SSF	PF00474	81 - 503	1.8e-20	Sodium:solute symporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45380
fragaria_vesca	FvH4_5g24140 FvH4_5g24140 FvH4_5g24140 FvH4_5g24140
malus_domestica	MD06G1017300.v1.1
prunus_persica	Prupe.5G019100_v2.0.a1
pyrus_communis	pycom06g01400 pycom06g01410
rosa_chinensis	RchiOBHm_Chr4g0401421 RchiOBHm_Chr4g0401521 RchiOBHm_Chr7g0213721 RchiOBHm_Chr7g0213811
rosa_laevigata	RLG00000002782 RLG00000002785 RLG00000002792 RLG00000009147
rosa_multiflora	Rmu_sc0000328.1_g000016 Rmu_sc0001524.1_g000047 Rmu_sc0002657.1_g000010 Rmu_sc0004549.1_g000018 Rmu_sc0006560.1_g000004
rosa_roxburghii	Rroxscaffold_3G00245690 Rroxscaffold_5G00346150
rosa_rugosa	Rorug04G0029700 Rorug04G0030000 Rorug04G0030100 Rorug07G0144600
rosa_samantha	Rh4AG107000 Rh4AG107300 Rh4AG107900 Rh4CG116200 Rh4DG099100 Rh7BG271000 Rh7DG283200
rosa_wichuraiana	Rw0G009180 Rw4G008720 Rw4G008750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1838
Acc36I	ACCTGC	1 cut(s)	1838
Acc65I	GGTACC	1 cut(s)	1685
AccB1I	GGYRCC	1 cut(s)	1685
AccI	GTMKAC	3 cut(s)	636, 723, 734
AccII	CGCG	1 cut(s)	1448
AciI	CCGC	8 cut(s)	26, 378, 488, 778, 1143, 1267, 1561, 1883
AclWI	GGATC	4 cut(s)	1177, 1274, 1321, 1529
AcoI	YGGCCR	4 cut(s)	60, 835, 1558, 2049
AcuI	CTGAAG	1 cut(s)	2048
AcvI	CACGTG	2 cut(s)	58, 703
AfaI	GTAC	9 cut(s)	50, 396, 708, 773, 878, 1274, 1687, 1745, 1868
AfiI	CCNNNNNNNGG	2 cut(s)	787, 857
AgeI	ACCGGT	1 cut(s)	1936
AgsI	TTSAA	3 cut(s)	241, 330, 2015
AhlI	ACTAGT	2 cut(s)	709, 904
AjuI	GAANNNNNNNTTGG	2 cut(s)	2096, 2128
AloI	GAACNNNNNNTCC	2 cut(s)	1158, 1190
Alw21I	GWGCWC	2 cut(s)	1081, 1422
Alw26I	GTCTC	4 cut(s)	21, 60, 295, 1621
AlwI	GGATC	4 cut(s)	1177, 1274, 1321, 1529
AlwNI	CAGNNNCTG	1 cut(s)	513
AoxI	GGCC	7 cut(s)	60, 835, 989, 1083, 1558, 1826, 2049
AsiGI	ACCGGT	1 cut(s)	1936
Asp718I	GGTACC	1 cut(s)	1685
AspA2I	CCTAGG	1 cut(s)	1492
AspLEI	GCGC	2 cut(s)	383, 977
AspS9I	GGNCC	4 cut(s)	359, 848, 1084, 1827
AsuHPI	GGTGA	3 cut(s)	1656, 1693, 1862
AsuNHI	GCTAGC	4 cut(s)	5, 374, 605, 1357
AvaII	GGWCC	2 cut(s)	359, 848
AvrII	CCTAGG	1 cut(s)	1492
BaeGI	GKGCMC	2 cut(s)	485, 1907
BaeI	ACNNNNGTAYC	4 cut(s)	386, 419, 1669, 1702
BalI	TGGCCA	1 cut(s)	2051
BanI	GGYRCC	1 cut(s)	1685
BarI	GAAGNNNNNNTAC	2 cut(s)	1743, 1775
BbrPI	CACGTG	2 cut(s)	58, 703
BbsI	GAAGAC	2 cut(s)	166, 493
Bbv12I	GWGCWC	2 cut(s)	1081, 1422
BccI	CCATC	2 cut(s)	1150, 1451
BceAI	ACGGC	3 cut(s)	753, 850, 1004
BcgI	CGANNNNNNTGC	2 cut(s)	975, 1009
BciVI	GTATCC	2 cut(s)	956, 1249
BcoDI	GTCTC	4 cut(s)	21, 60, 295, 1621
BcuI	ACTAGT	2 cut(s)	709, 904
BfaI	CTAG	8 cut(s)	6, 375, 606, 710, 762, 905, 1358, 1493
BfmI	CTRYAG	3 cut(s)	246, 1146, 1651
BfoI	RGCGCY	2 cut(s)	384, 978
BfuAI	ACCTGC	1 cut(s)	1838
BfuI	GTATCC	2 cut(s)	956, 1249
BlnI	CCTAGG	1 cut(s)	1492
BmcAI	AGTACT	1 cut(s)	50
Bme18I	GGWCC	2 cut(s)	359, 848
BmgT120I	GGNCC	4 cut(s)	359, 848, 1084, 1827
BmiI	GGNNCC	7 cut(s)	160, 217, 438, 819, 1636, 1687, 1829
BmrI	ACTGGG	4 cut(s)	289, 976, 1082, 1690
BmsI	GCATC	1 cut(s)	774
BmtI	GCTAGC	4 cut(s)	9, 378, 609, 1361
BmuI	ACTGGG	4 cut(s)	289, 976, 1082, 1690
BpiI	GAAGAC	2 cut(s)	166, 493
BplI	GAGNNNNNCTC	2 cut(s)	421, 453
BpmI	CTGGAG	4 cut(s)	218, 669, 918, 1401
BpuEI	CTTGAG	2 cut(s)	1292, 2102
BsaAI	YACGTR	4 cut(s)	58, 703, 1272, 1276
BsaI	GGTCTC	1 cut(s)	21
BsaJI	CCNNGG	2 cut(s)	1492, 1704
BsaWI	WCCGGW	2 cut(s)	1936, 2056
BsaXI	ACNNNNNCTCC	8 cut(s)	618, 648, 891, 921, 1158, 1188, 1488, 1518
Bsc4I	CCNNNNNNNGG	2 cut(s)	787, 857
Bse118I	RCCGGY	1 cut(s)	1936
Bse1I	ACTGG	8 cut(s)	113, 279, 295, 838, 971, 1077, 1086, 1685
Bse3DI	GCAATG	4 cut(s)	273, 549, 1416, 1887
BseDI	CCNNGG	2 cut(s)	1492, 1704
BseGI	GGATG	3 cut(s)	227, 681, 1404
BseLI	CCNNNNNNNGG	2 cut(s)	787, 857
BseMI	GCAATG	4 cut(s)	273, 549, 1416, 1887
BseMII	CTCAG	2 cut(s)	32, 520
BseNI	ACTGG	8 cut(s)	113, 279, 295, 838, 971, 1077, 1086, 1685
BseRI	GAGGAG	1 cut(s)	429
BseSI	GKGCMC	2 cut(s)	485, 1907
BseYI	CCCAGC	2 cut(s)	477, 1950
BsgI	GTGCAG	2 cut(s)	969, 2018
Bsh1236I	CGCG	1 cut(s)	1448
BshFI	GGCC	7 cut(s)	62, 837, 991, 1085, 1560, 1828, 2051
BshNI	GGYRCC	1 cut(s)	1685
BshTI	ACCGGT	1 cut(s)	1936
BsiHKAI	GWGCWC	2 cut(s)	1081, 1422
BsiSI	CCGG	4 cut(s)	63, 1733, 1937, 2057
BsiWI	CGTACG	1 cut(s)	1272
BslFI	GGGAC	3 cut(s)	1028, 1083, 1137
BslI	CCNNNNNNNGG	2 cut(s)	787, 857
BsmAI	GTCTC	4 cut(s)	21, 60, 295, 1621
BsmBI	CGTCTC	2 cut(s)	60, 1621
BsmFI	GGGAC	3 cut(s)	1028, 1083, 1137
BsnI	GGCC	7 cut(s)	62, 837, 991, 1085, 1560, 1828, 2051
Bso31I	GGTCTC	1 cut(s)	21
Bsp1286I	GDGCHC	4 cut(s)	485, 1081, 1422, 1907
Bsp1407I	TGTACA	1 cut(s)	771
Bsp143I	GATC	9 cut(s)	423, 1090, 1169, 1279, 1326, 1521, 1698, 1726, 1812
BspACI	CCGC	8 cut(s)	26, 378, 488, 778, 1143, 1267, 1561, 1883
BspANI	GGCC	7 cut(s)	62, 837, 991, 1085, 1560, 1828, 2051
BspCNI	CTCAG	2 cut(s)	31, 519
BspFNI	CGCG	1 cut(s)	1448
BspLI	GGNNCC	7 cut(s)	160, 217, 438, 819, 1636, 1687, 1829
BspMAI	CTGCAG	2 cut(s)	250, 1655
BspMI	ACCTGC	1 cut(s)	1838
BspOI	GCTAGC	4 cut(s)	9, 378, 609, 1361
BspPI	GGATC	4 cut(s)	1177, 1274, 1321, 1529
BspT107I	GGYRCC	1 cut(s)	1685
BspTNI	GGTCTC	1 cut(s)	21
BsrDI	GCAATG	4 cut(s)	273, 549, 1416, 1887
BsrFI	RCCGGY	1 cut(s)	1936
BsrGI	TGTACA	1 cut(s)	771
BsrI	ACTGG	8 cut(s)	113, 279, 295, 838, 971, 1077, 1086, 1685
BssAI	RCCGGY	1 cut(s)	1936
BssECI	CCNNGG	2 cut(s)	1492, 1704
BssMI	GATC	9 cut(s)	423, 1090, 1169, 1279, 1326, 1521, 1698, 1726, 1812
BssNAI	GTATAC	2 cut(s)	724, 735
BssT1I	CCWWGG	1 cut(s)	1492
Bst1107I	GTATAC	2 cut(s)	724, 735
Bst4CI	ACNGT	6 cut(s)	454, 946, 1504, 1705, 1807, 1824
Bst6I	CTCTTC	2 cut(s)	1734, 1845
BstAPI	GCANNNNNTGC	1 cut(s)	1484
BstAUI	TGTACA	1 cut(s)	771
BstBAI	YACGTR	4 cut(s)	58, 703, 1272, 1276
BstC8I	GCNNGC	8 cut(s)	7, 376, 475, 607, 676, 742, 1359, 1602
BstDEI	CTNAG	4 cut(s)	18, 506, 1625, 1692
BstDSI	CCRYGG	1 cut(s)	1704
BstENI	CCTNNNNNAGG	1 cut(s)	785
BstF5I	GGATG	3 cut(s)	227, 681, 1404
BstFNI	CGCG	1 cut(s)	1448
BstH2I	RGCGCY	2 cut(s)	384, 978
BstHHI	GCGC	2 cut(s)	383, 977
BstKTI	GATC	9 cut(s)	426, 1093, 1172, 1282, 1329, 1524, 1701, 1729, 1815
BstMAI	GTCTC	4 cut(s)	21, 60, 295, 1621
BstMBI	GATC	9 cut(s)	423, 1090, 1169, 1279, 1326, 1521, 1698, 1726, 1812
BstMWI	GCNNNNNNNGC	9 cut(s)	167, 202, 380, 443, 983, 1484, 1643, 1889, 1928
BstNSI	RCATGY	1 cut(s)	1646
BstSFI	CTRYAG	3 cut(s)	246, 1146, 1651
BstSLI	GKGCMC	2 cut(s)	485, 1907
BstSNI	TACGTA	1 cut(s)	1276
BstUI	CGCG	1 cut(s)	1448
BstV2I	GAAGAC	2 cut(s)	166, 493
BstX2I	RGATCY	2 cut(s)	1169, 1279
BstXI	CCANNNNNNTGG	1 cut(s)	845
BstYI	RGATCY	2 cut(s)	1169, 1279
BstZ17I	GTATAC	2 cut(s)	724, 735
BsuI	GTATCC	2 cut(s)	956, 1249
BsuRI	GGCC	7 cut(s)	62, 837, 991, 1085, 1560, 1828, 2051
BtgI	CCRYGG	1 cut(s)	1704
BtgZI	GCGATG	2 cut(s)	1429, 1912
BtsCI	GGATG	3 cut(s)	227, 681, 1404
BtsI	GCAGTG	4 cut(s)	243, 751, 1209, 1368
BveI	ACCTGC	1 cut(s)	1838
Cac8I	GCNNGC	8 cut(s)	7, 376, 475, 607, 676, 742, 1359, 1602
CaiI	CAGNNNCTG	1 cut(s)	513
CfoI	GCGC	2 cut(s)	383, 977
Cfr10I	RCCGGY	1 cut(s)	1936
Cfr13I	GGNCC	4 cut(s)	359, 848, 1084, 1827
Csp6I	GTAC	9 cut(s)	49, 395, 707, 772, 877, 1273, 1686, 1744, 1867
CspAI	ACCGGT	1 cut(s)	1936
CviQI	GTAC	9 cut(s)	49, 395, 707, 772, 877, 1273, 1686, 1744, 1867
DdeI	CTNAG	4 cut(s)	18, 506, 1625, 1692
DpnI	GATC	9 cut(s)	425, 1092, 1171, 1281, 1328, 1523, 1700, 1728, 1814
DpnII	GATC	9 cut(s)	423, 1090, 1169, 1279, 1326, 1521, 1698, 1726, 1812
EaeI	YGGCCR	4 cut(s)	60, 835, 1558, 2049
Eam1104I	CTCTTC	2 cut(s)	1734, 1845
EarI	CTCTTC	2 cut(s)	1734, 1845
EciI	GGCGGA	1 cut(s)	15
Eco105I	TACGTA	1 cut(s)	1276
Eco130I	CCWWGG	1 cut(s)	1492
Eco31I	GGTCTC	1 cut(s)	21
Eco32I	GATATC	1 cut(s)	1261
Eco47I	GGWCC	2 cut(s)	359, 848
Eco57I	CTGAAG	1 cut(s)	2048
Eco72I	CACGTG	2 cut(s)	58, 703
EcoNI	CCTNNNNNAGG	1 cut(s)	785
EcoRV	GATATC	1 cut(s)	1261
EcoT14I	CCWWGG	1 cut(s)	1492
ErhI	CCWWGG	1 cut(s)	1492
Esp3I	CGTCTC	2 cut(s)	60, 1621
FalI	AAGNNNNNCTT	6 cut(s)	346, 378, 998, 1030, 2060, 2092
FaqI	GGGAC	3 cut(s)	1028, 1083, 1137
FblI	GTMKAC	3 cut(s)	636, 723, 734
FokI	GGATG	3 cut(s)	214, 668, 1411
FspBI	CTAG	8 cut(s)	6, 375, 606, 710, 762, 905, 1358, 1493
GlaI	GCGC	2 cut(s)	382, 976
GsaI	CCCAGC	2 cut(s)	481, 1954
GsuI	CTGGAG	4 cut(s)	218, 669, 918, 1401
HaeII	RGCGCY	2 cut(s)	384, 978
HaeIII	GGCC	7 cut(s)	62, 837, 991, 1085, 1560, 1828, 2051
HapII	CCGG	4 cut(s)	63, 1733, 1937, 2057
HhaI	GCGC	2 cut(s)	383, 977
Hin6I	GCGC	2 cut(s)	381, 975
HinP1I	GCGC	2 cut(s)	381, 975
HincII	GTYRAC	1 cut(s)	999
HindII	GTYRAC	1 cut(s)	999
HinfI	GANTC	3 cut(s)	270, 2023, 2060
HpaII	CCGG	4 cut(s)	63, 1733, 1937, 2057
HphI	GGTGA	3 cut(s)	1656, 1693, 1862
Hpy188I	TCNGA	6 cut(s)	232, 557, 932, 1225, 2028, 2065
Hpy188III	TCNNGA	6 cut(s)	427, 466, 897, 1543, 1571, 1963
Hpy99I	CGWCG	2 cut(s)	667, 932
HpyAV	CCTTC	7 cut(s)	172, 1002, 1708, 1841, 2002, 2080, 2086
HpyCH4III	ACNGT	6 cut(s)	454, 946, 1504, 1705, 1807, 1824
HpyCH4IV	ACGT	5 cut(s)	57, 665, 702, 1271, 1275
HpyF10VI	GCNNNNNNNGC	9 cut(s)	167, 202, 380, 443, 983, 1484, 1643, 1889, 1928
HpyF3I	CTNAG	4 cut(s)	18, 506, 1625, 1692
HpySE526I	ACGT	5 cut(s)	57, 665, 702, 1271, 1275
HspAI	GCGC	2 cut(s)	381, 975
KpnI	GGTACC	1 cut(s)	1689
Kzo9I	GATC	9 cut(s)	423, 1090, 1169, 1279, 1326, 1521, 1698, 1726, 1812
LmnI	GCTCC	7 cut(s)	158, 442, 817, 1076, 1496, 1634, 2116
LweI	GCATC	1 cut(s)	774
MaeI	CTAG	8 cut(s)	6, 375, 606, 710, 762, 905, 1358, 1493
MaeII	ACGT	5 cut(s)	57, 665, 702, 1271, 1275
MaeIII	GTNAC	4 cut(s)	535, 1204, 1540, 1662
MalI	GATC	9 cut(s)	425, 1092, 1171, 1281, 1328, 1523, 1700, 1728, 1814
MboI	GATC	9 cut(s)	423, 1090, 1169, 1279, 1326, 1521, 1698, 1726, 1812
MflI	RGATCY	2 cut(s)	1169, 1279
MhlI	GDGCHC	4 cut(s)	485, 1081, 1422, 1907
MlsI	TGGCCA	1 cut(s)	2051
MluCI	AATT	5 cut(s)	822, 862, 1548, 1757, 1971
MluNI	TGGCCA	1 cut(s)	2051
MlyI	GAGTC	1 cut(s)	264
MmeI	TCCRAC	2 cut(s)	910, 1376
Mox20I	TGGCCA	1 cut(s)	2051
MscI	TGGCCA	1 cut(s)	2051
MseI	TTAA	2 cut(s)	120, 261
MslI	CAYNNNNRTG	3 cut(s)	232, 1202, 2042
Msp20I	TGGCCA	1 cut(s)	2051
MspA1I	CMGCKG	1 cut(s)	488
MspI	CCGG	4 cut(s)	63, 1733, 1937, 2057
MvnI	CGCG	1 cut(s)	1448
MwoI	GCNNNNNNNGC	9 cut(s)	167, 202, 380, 443, 983, 1484, 1643, 1889, 1928
NdeII	GATC	9 cut(s)	423, 1090, 1169, 1279, 1326, 1521, 1698, 1726, 1812
NheI	GCTAGC	4 cut(s)	5, 374, 605, 1357
NlaIV	GGNNCC	7 cut(s)	160, 217, 438, 819, 1636, 1687, 1829
NmuCI	GTSAC	3 cut(s)	1204, 1540, 1662
NspI	RCATGY	1 cut(s)	1646
PaqCI	CACCTGC	1 cut(s)	1838
PfeI	GAWTC	2 cut(s)	2023, 2060
Pfl23II	CGTACG	1 cut(s)	1272
PinAI	ACCGGT	1 cut(s)	1936
PleI	GAGTC	1 cut(s)	264
PmaCI	CACGTG	2 cut(s)	58, 703
PmlI	CACGTG	2 cut(s)	58, 703
PpsI	GAGTC	1 cut(s)	264
Ppu21I	YACGTR	4 cut(s)	58, 703, 1272, 1276
PspCI	CACGTG	2 cut(s)	58, 703
PspFI	CCCAGC	2 cut(s)	477, 1950
PspLI	CGTACG	1 cut(s)	1272
PspN4I	GGNNCC	7 cut(s)	160, 217, 438, 819, 1636, 1687, 1829
PspPI	GGNCC	4 cut(s)	359, 848, 1084, 1827
PstI	CTGCAG	2 cut(s)	250, 1655
PstNI	CAGNNNCTG	1 cut(s)	513
PsuI	RGATCY	2 cut(s)	1169, 1279
RsaI	GTAC	9 cut(s)	50, 396, 708, 773, 878, 1274, 1687, 1745, 1868
RsaNI	GTAC	9 cut(s)	49, 395, 707, 772, 877, 1273, 1686, 1744, 1867
RseI	CAYNNNNRTG	3 cut(s)	232, 1202, 2042
SaqAI	TTAA	2 cut(s)	120, 261
Sau3AI	GATC	9 cut(s)	423, 1090, 1169, 1279, 1326, 1521, 1698, 1726, 1812
Sau96I	GGNCC	4 cut(s)	359, 848, 1084, 1827
ScaI	AGTACT	1 cut(s)	50
SchI	GAGTC	1 cut(s)	264
SduI	GDGCHC	4 cut(s)	485, 1081, 1422, 1907
SfaNI	GCATC	1 cut(s)	774
SfcI	CTRYAG	3 cut(s)	246, 1146, 1651
SinI	GGWCC	2 cut(s)	359, 848
SmiMI	CAYNNNNRTG	3 cut(s)	232, 1202, 2042
SmlI	CTYRAG	2 cut(s)	1307, 2081
SmoI	CTYRAG	2 cut(s)	1307, 2081
SnaBI	TACGTA	1 cut(s)	1276
SpeI	ACTAGT	2 cut(s)	709, 904
Sse9I	AATT	5 cut(s)	822, 862, 1548, 1757, 1971
SsiI	CCGC	8 cut(s)	26, 378, 488, 778, 1143, 1267, 1561, 1883
SspI	AATATT	1 cut(s)	529
SspMI	CTAG	8 cut(s)	6, 375, 606, 710, 762, 905, 1358, 1493
StyI	CCWWGG	1 cut(s)	1492
TaaI	ACNGT	6 cut(s)	454, 946, 1504, 1705, 1807, 1824
TaiI	ACGT	5 cut(s)	60, 668, 705, 1274, 1278
TaqI	TCGA	3 cut(s)	33, 41, 1585
TaqII	GACCGA	1 cut(s)	1528
TasI	AATT	5 cut(s)	822, 862, 1548, 1757, 1971
TatI	WGTACW	3 cut(s)	48, 771, 1743
TauI	GCSGC	3 cut(s)	381, 491, 1563
TfiI	GAWTC	2 cut(s)	2023, 2060
Tru1I	TTAA	2 cut(s)	120, 261
Tru9I	TTAA	2 cut(s)	120, 261
TseFI	GTSAC	3 cut(s)	1204, 1540, 1662
Tsp45I	GTSAC	3 cut(s)	1204, 1540, 1662
TspDTI	ATGAA	5 cut(s)	1186, 1209, 1377, 1441, 2036
TspGWI	ACGGA	2 cut(s)	84, 1308
VpaK11BI	GGWCC	2 cut(s)	359, 848
XagI	CCTNNNNNAGG	1 cut(s)	785
XceI	RCATGY	1 cut(s)	1646
XmaJI	CCTAGG	1 cut(s)	1492
XmiI	GTMKAC	3 cut(s)	636, 723, 734
XspI	CTAG	8 cut(s)	6, 375, 606, 710, 762, 905, 1358, 1493
ZrmI	AGTACT	1 cut(s)	50

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.