Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0002991

Physical Location & Seq

Genomic Coordinates Reverse (-)

39922431 .. 39926003

Gene Structure 3573 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002792

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGGCTAGCTCTGGGTCACGGTGTCCGCCGTTTGACTTTTCCGGCAAGTACTACGACGTCGTGTCTGGAGATGGCTGTGGGAGGCAAAGCAGCTTCTTTGAAGGGAAAGCAGTCCTCAATCAGAGCGTTGGATACTCTGTTATTCTTGGCTTTGGAGCCTTCTTTGCTGTCTTCACATCTTTCCTGGTATGGCTGGAGAAGCGGTATGTTGGTTCGAAGCACACATCCGAATGGTTCAACACTGCCGGGAGAAATGTTAAAACAGGGCTTATAGCTAGTGTGATTGTATCTCAGTGGACCTGGGCAGCAACAATTTTGCAAAGTTCAAATGTTGCTTGGCAGTATGGAGTAAGTGGCCCTTTCTGGTATGCTAGTGGAGCGACTATTCAGGTACTCTTGTTTGGTATAATGGCTATAGAGATCAAGAGAAAGGCTCCTCATGCTCACACTGTATGCGAAATTGTAAAAGCTCGTTTCTGCTTTTTGACAAATATTATTGTAACGGCGATGCTGCTGCTCGGTGGTTCTGCTGTTGTAAATGCACTTACCGGAGTAAACATCTATGCTGCTAGTTTCGTGATACCTCTTGGTGTAATTGTCTTCACTTTAGCTGGAGGTCTAAAAGCCACATTCTTGGCAAGCTATATACATTCTGTTATAGTTCATGTGGTCCTAGTCATATTTGTATACCTTGTATATACAGCAAGCAATGAGCTCGAGGTAGCAAGTAAATCAAGAATCTGTCAGGAGCCAATTTCTCATCCTGGGCAGTCTTGTGGTCCTGTTGGGCTAGTCTTTGGGATTATCAACATTGTTGGAAACTTTGGCACTGTTTTTGTTGACAATGGATATTGGGTAAGCGCCATAGCTGCACGGCCGTCATCAACTCACAAGGGTTACTTGTTAGGTGGGCTTGTCTGGTTTGCAGTCCCATTCTCTTTGGCAACATCACTAGGTCTGGGAGCACTGGCCCTTGACTTACCGATAACAGCAAGTGAAGCAAGTTGTGGTCTTGTTCCTCCGGCCACAGCTATAGCTTTGATGGGAAAAGGAGGATCAGTTCTTCTTCTTACTATGCTCTTCATGGCAGTGACATCTGCTGGTTCTTCAGAGCTTATAGCAGTATCCTCATTATGTACATATGATATCTACCGCACATACATAGATCCAGATGCAACTGGAAAGACAATCCTCAAGGTATCTAGGGCTGTCATCCTTAGTTTTGGATGCTTTATGGGGTTGTTAGCAGTGATACTAAACAAGGCAGGAGTTTCATTGGGTTGGATGTATCTGGCAATGGGAGTGCTCATTGGCTCAGCAATGCTTCCCATTGCTTTTATGCTTCTGTGGAGAAAGGAAAATGCAATTGGAGCAATTCTAGGAGCAACCATTGGTTGTCTTCTTGGGATCATCACTTGGCTATCAGTCGCGAAAATTGAGTATGGCCGAGTGAATCTTGACATAACAGGTAGGAATGCACCAATGCTTGCTGGAAACCTTGTCTCTATACTTACTGGTGGCGCTATACATGCTATCTGTAGCTTCGTGTCACCGCAAAACTACGATTGGGGGACCACTAGGCAGATCACAGTGGTTGAGAAGGTAAAGAGTGAGCTGCCAGCAGAAGAGTACAAGGAGGAGAAAGTATTGAGAGCAAAAGCATGGATAGTGAAATGGGGTGTTGGATTTACTTTTGTGATTGTTTTGTTGTGGCCTCTTCTAAGTCTTCCAGCGGCGGATTTCAGTATAGGGTACTTCACATTCTGGGCAGTGATTGCAATAGCATGGGGTACAATTGGTTCCATTGCCATCATTGCTTTACCGGTATTTGAGAGCTGGGAAACGATCCAGAGTGTCCTTCTGGGCATGTTTACAAATGAAAGGCTCATGGAAAAGGTTGAAGAAATGAACTTGAGACTGCGGACAATCATGTTGGCTATACCAGAAGCAGAGAGAATTTACTTGCTTGAGAAGGAGAAGGCTAAGAAGAAAGAACCATTAGAGCAAATGCAACCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006995 GO:0007154 GO:0008150 GO:0008324 GO:0008519 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0015075 GO:0015101 GO:0015203 GO:0015204 GO:0015291 GO:0015293 GO:0015489 GO:0015606 GO:0015695 GO:0015696 GO:0015840 GO:0015846 GO:0015847 GO:0015848 GO:0016020 GO:0016021 GO:0019755 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034220 GO:0042594 GO:0042886 GO:0042887 GO:0043562 GO:0044425 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0071496 GO:0071702 GO:0071705 GO:0071918 GO:0071944 GO:0072488 GO:0098655 GO:1902047 GO:1903711

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SSF

Protein Analysis

673

Amino Acids

72.48

Weight (kDa)

8.7

Isoelectric Point (pI)

33.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SSF	PF00474	80 - 465	1.5e-10	Sodium:solute symporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45380
fragaria_vesca	FvH4_5g24140 FvH4_5g24140 FvH4_5g24140 FvH4_5g24140
malus_domestica	MD06G1017300.v1.1
prunus_persica	Prupe.5G019100_v2.0.a1
pyrus_communis	pycom06g01400 pycom06g01410
rosa_chinensis	RchiOBHm_Chr4g0401421 RchiOBHm_Chr4g0401521 RchiOBHm_Chr7g0213721 RchiOBHm_Chr7g0213811
rosa_laevigata	RLG00000002782 RLG00000002785 RLG00000002792 RLG00000009147
rosa_multiflora	Rmu_sc0000328.1_g000016 Rmu_sc0001524.1_g000047 Rmu_sc0002657.1_g000010 Rmu_sc0004549.1_g000018 Rmu_sc0006560.1_g000004
rosa_roxburghii	Rroxscaffold_3G00245690 Rroxscaffold_5G00346150
rosa_rugosa	Rorug04G0029700 Rorug04G0030000 Rorug04G0030100 Rorug07G0144600
rosa_samantha	Rh4AG107000 Rh4AG107300 Rh4AG107900 Rh4CG116200 Rh4DG099100 Rh7BG271000 Rh7DG283200
rosa_wichuraiana	Rw0G009180 Rw4G008720 Rw4G008750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	60
AccI	GTMKAC	1 cut(s)	687
AccII	CGCG	1 cut(s)	1430
AciI	CCGC	7 cut(s)	26, 202, 1153, 1553, 1733, 1736, 1921
AclWI	GGATC	4 cut(s)	1063, 1160, 1415, 1840
AcoI	YGGCCR	3 cut(s)	875, 1023, 1444
AcsI	RAATTY	1 cut(s)	1956
AcuI	CTGAAG	1 cut(s)	1092
AcyI	GRCGYC	1 cut(s)	57
AfaI	GTAC	6 cut(s)	50, 393, 1138, 1631, 1754, 1792
AgeI	ACCGGT	1 cut(s)	1822
AgsI	TTSAA	4 cut(s)	101, 238, 327, 1901
AhdI	GACNNNNNGTC	1 cut(s)	61
AjnI	CCWGG	3 cut(s)	183, 299, 763
AjuI	GAANNNNNNNTTGG	2 cut(s)	1350, 1382
AloI	GAACNNNNNNTCC	2 cut(s)	1044, 1076
Alw21I	GWGCWC	3 cut(s)	717, 967, 1308
Alw26I	GTCTC	2 cut(s)	1507, 1909
AlwI	GGATC	4 cut(s)	1063, 1160, 1415, 1840
Ama87I	CYCGRG	1 cut(s)	716
AoxI	GGCC	6 cut(s)	355, 875, 969, 1023, 1444, 1712
ApeKI	GCWGC	7 cut(s)	90, 305, 511, 514, 566, 869, 1615
ApoI	RAATTY	1 cut(s)	1956
AsiGI	ACCGGT	1 cut(s)	1822
AspLEI	GCGC	2 cut(s)	863, 1523
AspS9I	GGNCC	6 cut(s)	297, 356, 670, 779, 970, 1572
AsuC2I	CCSGG	1 cut(s)	247
AsuHPI	GGTGA	1 cut(s)	1542
AsuII	TTCGAA	1 cut(s)	215
AsuNHI	GCTAGC	1 cut(s)	5
AvaI	CYCGRG	1 cut(s)	716
AvaII	GGWCC	4 cut(s)	297, 670, 779, 1572
BaeI	ACNNNNGTAYC	2 cut(s)	383, 416
BanII	GRGCYC	1 cut(s)	717
BbsI	GAAGAC	4 cut(s)	163, 592, 1391, 1718
Bbv12I	GWGCWC	3 cut(s)	717, 967, 1308
BbvI	GCAGC	7 cut(s)	102, 317, 498, 501, 553, 856, 1602
BccI	CCATC	3 cut(s)	65, 1036, 1817
BceAI	ACGGC	4 cut(s)	13, 519, 862, 890
BcgI	CGANNNNNNTGC	4 cut(s)	496, 530, 697, 731
BciT130I	CCWGG	3 cut(s)	185, 301, 765
BciVI	GTATCC	2 cut(s)	125, 1135
BcnI	CCSGG	1 cut(s)	247
BcoDI	GTCTC	2 cut(s)	1507, 1909
BfmI	CTRYAG	3 cut(s)	414, 1032, 1537
BfoI	RGCGCY	2 cut(s)	864, 1524
BfuI	GTATCC	2 cut(s)	125, 1135
BisI	GCNGC	8 cut(s)	91, 306, 512, 515, 567, 870, 1616, 1734
BlpI	GCTNAGC	1 cut(s)	1315
BlsI	GCNGC	8 cut(s)	92, 307, 513, 516, 568, 871, 1617, 1735
BmcAI	AGTACT	1 cut(s)	50
Bme1390I	CCNGG	4 cut(s)	185, 247, 301, 765
Bme18I	GGWCC	4 cut(s)	297, 670, 779, 1572
BmeRI	GACNNNNNGTC	1 cut(s)	61
BmeT110I	CYCGRG	1 cut(s)	716
BmgT120I	GGNCC	6 cut(s)	297, 356, 670, 779, 970, 1572
BmiI	GGNNCC	5 cut(s)	157, 435, 750, 1573, 1801
BmrFI	CCNGG	4 cut(s)	185, 247, 301, 765
BmsI	GCATC	3 cut(s)	498, 1162, 1217
BmtI	GCTAGC	1 cut(s)	9
BpiI	GAAGAC	4 cut(s)	163, 592, 1391, 1718
BplI	GAGNNNNNCTC	2 cut(s)	418, 450
BpmI	CTGGAG	3 cut(s)	87, 215, 633
Bpu1102I	GCTNAGC	1 cut(s)	1315
Bpu14I	TTCGAA	1 cut(s)	215
BpuEI	CTTGAG	3 cut(s)	1178, 1933, 1988
BpuMI	CCSGG	1 cut(s)	247
BsaHI	GRCGYC	1 cut(s)	57
BsaJI	CCNNGG	2 cut(s)	300, 764
BsaWI	WCCGGW	2 cut(s)	548, 1822
BsaXI	ACNNNNNCTCC	4 cut(s)	188, 218, 1044, 1074
Bse118I	RCCGGY	1 cut(s)	1822
Bse1I	ACTGG	3 cut(s)	972, 1183, 1519
Bse3DI	GCAATG	6 cut(s)	715, 1302, 1326, 1329, 1803, 1812
BseBI	CCWGG	3 cut(s)	185, 301, 765
BseDI	CCNNGG	2 cut(s)	300, 764
BseGI	GGATG	5 cut(s)	224, 760, 1212, 1232, 1290
BseMI	GCAATG	6 cut(s)	715, 1302, 1326, 1329, 1803, 1812
BseMII	CTCAG	2 cut(s)	305, 1329
BseNI	ACTGG	3 cut(s)	972, 1183, 1519
BseRI	GAGGAG	2 cut(s)	426, 1652
BseX3I	CGGCCG	1 cut(s)	875
BseXI	GCAGC	7 cut(s)	102, 317, 498, 501, 553, 856, 1602
BseYI	CCCAGC	1 cut(s)	1836
BsgI	GTGCAG	1 cut(s)	855
Bsh1236I	CGCG	1 cut(s)	1430
Bsh1285I	CGRYCG	1 cut(s)	878
BshFI	GGCC	6 cut(s)	357, 877, 971, 1025, 1446, 1714
BshTI	ACCGGT	1 cut(s)	1822
BsiEI	CGRYCG	1 cut(s)	878
BsiHKAI	GWGCWC	3 cut(s)	717, 967, 1308
BsiHKCI	CYCGRG	1 cut(s)	716
BsiSI	CCGG	5 cut(s)	42, 246, 549, 1022, 1823
BslFI	GGGAC	2 cut(s)	914, 1585
BsmAI	GTCTC	2 cut(s)	1507, 1909
BsmFI	GGGAC	2 cut(s)	914, 1585
BsmI	GAATGC	1 cut(s)	1480
BsnI	GGCC	6 cut(s)	357, 877, 971, 1025, 1446, 1714
BsoBI	CYCGRG	1 cut(s)	716
Bsp119I	TTCGAA	1 cut(s)	215
Bsp1286I	GDGCHC	3 cut(s)	717, 967, 1308
Bsp1407I	TGTACA	1 cut(s)	1136
Bsp143I	GATC	6 cut(s)	420, 1055, 1165, 1407, 1584, 1845
Bsp1720I	GCTNAGC	1 cut(s)	1315
Bsp68I	TCGCGA	1 cut(s)	1430
BspACI	CCGC	7 cut(s)	26, 202, 1153, 1553, 1733, 1736, 1921
BspANI	GGCC	6 cut(s)	357, 877, 971, 1025, 1446, 1714
BspCNI	CTCAG	2 cut(s)	304, 1328
BspFNI	CGCG	1 cut(s)	1430
BspLI	GGNNCC	5 cut(s)	157, 435, 750, 1573, 1801
BspOI	GCTAGC	1 cut(s)	9
BspPI	GGATC	4 cut(s)	1063, 1160, 1415, 1840
BspQI	GCTCTTC	1 cut(s)	1085
BspT104I	TTCGAA	1 cut(s)	215
BsrDI	GCAATG	6 cut(s)	715, 1302, 1326, 1329, 1803, 1812
BsrFI	RCCGGY	1 cut(s)	1822
BsrGI	TGTACA	1 cut(s)	1136
BsrI	ACTGG	3 cut(s)	972, 1183, 1519
BssAI	RCCGGY	1 cut(s)	1822
BssECI	CCNNGG	2 cut(s)	300, 764
BssMI	GATC	6 cut(s)	420, 1055, 1165, 1407, 1584, 1845
BssNAI	GTATAC	1 cut(s)	688
BssNI	GRCGYC	1 cut(s)	57
Bst1107I	GTATAC	1 cut(s)	688
Bst2UI	CCWGG	3 cut(s)	185, 301, 765
Bst4CI	ACNGT	4 cut(s)	21, 451, 832, 1591
Bst6I	CTCTTC	3 cut(s)	1085, 1620, 1722
BstACI	GRCGYC	1 cut(s)	57
BstAPI	GCANNNNNTGC	1 cut(s)	1775
BstAUI	TGTACA	1 cut(s)	1136
BstBI	TTCGAA	1 cut(s)	215
BstC8I	GCNNGC	5 cut(s)	7, 640, 706, 1488, 1620
BstDEI	CTNAG	5 cut(s)	291, 1217, 1315, 1721, 1983
BstF5I	GGATG	5 cut(s)	224, 760, 1212, 1232, 1290
BstFNI	CGCG	1 cut(s)	1430
BstH2I	RGCGCY	2 cut(s)	864, 1524
BstHHI	GCGC	2 cut(s)	863, 1523
BstKTI	GATC	6 cut(s)	423, 1058, 1168, 1410, 1587, 1848
BstMAI	GTCTC	2 cut(s)	1507, 1909
BstMBI	GATC	6 cut(s)	420, 1055, 1165, 1407, 1584, 1845
BstMCI	CGRYCG	1 cut(s)	878
BstNI	CCWGG	3 cut(s)	185, 301, 765
BstNSI	RCATGY	2 cut(s)	1532, 1870
BstSCI	CCNGG	4 cut(s)	183, 245, 299, 763
BstSFI	CTRYAG	3 cut(s)	414, 1032, 1537
BstUI	CGCG	1 cut(s)	1430
BstV1I	GCAGC	7 cut(s)	102, 317, 498, 501, 553, 856, 1602
BstV2I	GAAGAC	4 cut(s)	163, 592, 1391, 1718
BstX2I	RGATCY	1 cut(s)	1165
BstXI	CCANNNNNNTGG	1 cut(s)	634
BstYI	RGATCY	1 cut(s)	1165
BstZ17I	GTATAC	1 cut(s)	688
BstZI	CGGCCG	1 cut(s)	875
BsuI	GTATCC	2 cut(s)	125, 1135
BsuRI	GGCC	6 cut(s)	357, 877, 971, 1025, 1446, 1714
BtgZI	GCGATG	1 cut(s)	521
BtsCI	GGATG	5 cut(s)	224, 760, 1212, 1232, 1290
BtsI	GCAGTG	4 cut(s)	240, 1095, 1254, 1776
BtsIMutI	CAGTG	9 cut(s)	240, 299, 447, 828, 965, 1095, 1254, 1596, 1776
BtuMI	TCGCGA	1 cut(s)	1430
Cac8I	GCNNGC	5 cut(s)	7, 640, 706, 1488, 1620
CfoI	GCGC	2 cut(s)	863, 1523
Cfr10I	RCCGGY	1 cut(s)	1822
Cfr13I	GGNCC	6 cut(s)	297, 356, 670, 779, 970, 1572
Csp6I	GTAC	6 cut(s)	49, 392, 1137, 1630, 1753, 1791
CspAI	ACCGGT	1 cut(s)	1822
CviAII	CATG	9 cut(s)	440, 665, 1084, 1529, 1662, 1785, 1867, 1888, 1930
CviQI	GTAC	6 cut(s)	49, 392, 1137, 1630, 1753, 1791
DdeI	CTNAG	5 cut(s)	291, 1217, 1315, 1721, 1983
DpnI	GATC	6 cut(s)	422, 1057, 1167, 1409, 1586, 1847
DpnII	GATC	6 cut(s)	420, 1055, 1165, 1407, 1584, 1845
DriI	GACNNNNNGTC	1 cut(s)	61
EaeI	YGGCCR	3 cut(s)	875, 1023, 1444
EagI	CGGCCG	1 cut(s)	875
Eam1104I	CTCTTC	3 cut(s)	1085, 1620, 1722
Eam1105I	GACNNNNNGTC	1 cut(s)	61
EarI	CTCTTC	3 cut(s)	1085, 1620, 1722
EciI	GGCGGA	2 cut(s)	15, 1751
Ecl136II	GAGCTC	1 cut(s)	715
EclXI	CGGCCG	1 cut(s)	875
Eco24I	GRGCYC	1 cut(s)	717
Eco32I	GATATC	1 cut(s)	1147
Eco47I	GGWCC	4 cut(s)	297, 670, 779, 1572
Eco52I	CGGCCG	1 cut(s)	875
Eco53kI	GAGCTC	1 cut(s)	715
Eco57I	CTGAAG	1 cut(s)	1092
Eco88I	CYCGRG	1 cut(s)	716
EcoICRI	GAGCTC	1 cut(s)	715
EcoRII	CCWGG	3 cut(s)	183, 299, 763
EcoRV	GATATC	1 cut(s)	1147
EcoT38I	GRGCYC	1 cut(s)	717
FaeI	CATG	9 cut(s)	443, 668, 1087, 1532, 1665, 1788, 1870, 1891, 1933
FalI	AAGNNNNNCTT	4 cut(s)	343, 375, 884, 916
FaqI	GGGAC	2 cut(s)	914, 1585
FatI	CATG	9 cut(s)	439, 664, 1083, 1528, 1661, 1784, 1866, 1887, 1929
FauNDI	CATATG	1 cut(s)	1141
FblI	GTMKAC	1 cut(s)	687
Fnu4HI	GCNGC	8 cut(s)	91, 306, 512, 515, 567, 870, 1616, 1734
FokI	GGATG	5 cut(s)	211, 747, 1199, 1239, 1297
FriOI	GRGCYC	1 cut(s)	717
Fsp4HI	GCNGC	8 cut(s)	91, 306, 512, 515, 567, 870, 1616, 1734
GlaI	GCGC	2 cut(s)	862, 1522
GluI	GCNGC	8 cut(s)	91, 306, 512, 515, 567, 870, 1616, 1734
GsaI	CCCAGC	1 cut(s)	1840
GsuI	CTGGAG	3 cut(s)	87, 215, 633
HaeII	RGCGCY	2 cut(s)	864, 1524
HaeIII	GGCC	6 cut(s)	357, 877, 971, 1025, 1446, 1714
HapII	CCGG	5 cut(s)	42, 246, 549, 1022, 1823
HhaI	GCGC	2 cut(s)	863, 1523
Hin1I	GRCGYC	1 cut(s)	57
Hin1II	CATG	9 cut(s)	443, 668, 1087, 1532, 1665, 1788, 1870, 1891, 1933
Hin6I	GCGC	2 cut(s)	861, 1521
HinP1I	GCGC	2 cut(s)	861, 1521
HincII	GTYRAC	1 cut(s)	841
HindII	GTYRAC	1 cut(s)	841
HinfI	GANTC	2 cut(s)	738, 1453
HpaII	CCGG	5 cut(s)	42, 246, 549, 1022, 1823
HphI	GGTGA	1 cut(s)	1542
Hpy166II	GTNNAC	5 cut(s)	297, 556, 688, 841, 1872
Hpy188I	TCNGA	3 cut(s)	123, 229, 1111
Hpy188III	TCNNGA	9 cut(s)	66, 424, 577, 735, 746, 1169, 1429, 1457, 1849
Hpy8I	GTNNAC	5 cut(s)	297, 556, 688, 841, 1872
Hpy99I	CGWCG	2 cut(s)	59, 62
HpyAV	CCTTC	6 cut(s)	95, 169, 1594, 1868, 1966, 1972
HpyCH4III	ACNGT	4 cut(s)	21, 451, 832, 1591
HpyCH4IV	ACGT	1 cut(s)	57
HpyCH4V	TGCA	9 cut(s)	319, 542, 872, 926, 1175, 1364, 1478, 1778, 2011
HpyF3I	CTNAG	5 cut(s)	291, 1217, 1315, 1721, 1983
HpySE526I	ACGT	1 cut(s)	57
Hsp92I	GRCGYC	1 cut(s)	57
Hsp92II	CATG	9 cut(s)	443, 668, 1087, 1532, 1665, 1788, 1870, 1891, 1933
HspAI	GCGC	2 cut(s)	861, 1521
Kzo9I	GATC	6 cut(s)	420, 1055, 1165, 1407, 1584, 1845
LguI	GCTCTTC	1 cut(s)	1085
LmnI	GCTCC	7 cut(s)	155, 377, 439, 748, 962, 1370, 1382
Lsp1109I	GCAGC	7 cut(s)	102, 317, 498, 501, 553, 856, 1602
LweI	GCATC	3 cut(s)	498, 1162, 1217
MaeII	ACGT	1 cut(s)	57
MaeIII	GTNAC	5 cut(s)	15, 499, 896, 1090, 1548
MalI	GATC	6 cut(s)	422, 1057, 1167, 1409, 1586, 1847
MboI	GATC	6 cut(s)	420, 1055, 1165, 1407, 1584, 1845
MfeI	CAATTG	2 cut(s)	1365, 1794
MflI	RGATCY	1 cut(s)	1165
MhlI	GDGCHC	3 cut(s)	717, 967, 1308
MluCI	AATT	9 cut(s)	312, 459, 594, 753, 1365, 1374, 1434, 1794, 1956
MmeI	TCCRAC	4 cut(s)	109, 796, 1262, 1663
MseI	TTAA	1 cut(s)	258
MslI	CAYNNNNRTG	2 cut(s)	229, 1088
MspA1I	CMGCKG	1 cut(s)	1733
MspI	CCGG	5 cut(s)	42, 246, 549, 1022, 1823
MspR9I	CCNGG	4 cut(s)	185, 247, 301, 765
MunI	CAATTG	2 cut(s)	1365, 1794
Mva1269I	GAATGC	1 cut(s)	1480
MvaI	CCWGG	3 cut(s)	185, 301, 765
MvnI	CGCG	1 cut(s)	1430
NciI	CCSGG	1 cut(s)	247
NdeI	CATATG	1 cut(s)	1141
NdeII	GATC	6 cut(s)	420, 1055, 1165, 1407, 1584, 1845
NheI	GCTAGC	1 cut(s)	5
NlaIII	CATG	9 cut(s)	443, 668, 1087, 1532, 1665, 1788, 1870, 1891, 1933
NlaIV	GGNNCC	5 cut(s)	157, 435, 750, 1573, 1801
NmeAIII	GCCGAG	1 cut(s)	1472
NmuCI	GTSAC	3 cut(s)	15, 1090, 1548
NruI	TCGCGA	1 cut(s)	1430
NspI	RCATGY	2 cut(s)	1532, 1870
NspV	TTCGAA	1 cut(s)	215
PaeR7I	CTCGAG	1 cut(s)	716
PciSI	GCTCTTC	1 cut(s)	1085
PctI	GAATGC	1 cut(s)	1480
PfeI	GAWTC	2 cut(s)	738, 1453
PinAI	ACCGGT	1 cut(s)	1822
PkrI	GCNGC	8 cut(s)	92, 307, 513, 516, 568, 871, 1617, 1735
Psp124BI	GAGCTC	1 cut(s)	717
Psp6I	CCWGG	3 cut(s)	183, 299, 763
PspFI	CCCAGC	1 cut(s)	1836
PspGI	CCWGG	3 cut(s)	183, 299, 763
PspN4I	GGNNCC	5 cut(s)	157, 435, 750, 1573, 1801
PspPI	GGNCC	6 cut(s)	297, 356, 670, 779, 970, 1572
PspXI	VCTCGAGB	1 cut(s)	716
PsrI	GAACNNNNNNTAC	2 cut(s)	1783, 1815
PsuI	RGATCY	1 cut(s)	1165
RruI	TCGCGA	1 cut(s)	1430
RsaI	GTAC	6 cut(s)	50, 393, 1138, 1631, 1754, 1792
RsaNI	GTAC	6 cut(s)	49, 392, 1137, 1630, 1753, 1791
RseI	CAYNNNNRTG	2 cut(s)	229, 1088
SacI	GAGCTC	1 cut(s)	717
SapI	GCTCTTC	1 cut(s)	1085
SaqAI	TTAA	1 cut(s)	258
SatI	GCNGC	8 cut(s)	91, 306, 512, 515, 567, 870, 1616, 1734
Sau3AI	GATC	6 cut(s)	420, 1055, 1165, 1407, 1584, 1845
Sau96I	GGNCC	6 cut(s)	297, 356, 670, 779, 970, 1572
ScaI	AGTACT	1 cut(s)	50
ScrFI	CCNGG	4 cut(s)	185, 247, 301, 765
SduI	GDGCHC	3 cut(s)	717, 967, 1308
SfaNI	GCATC	3 cut(s)	498, 1162, 1217
SfcI	CTRYAG	3 cut(s)	414, 1032, 1537
Sfr274I	CTCGAG	1 cut(s)	716
SfuI	TTCGAA	1 cut(s)	215
SinI	GGWCC	4 cut(s)	297, 670, 779, 1572
SlaI	CTCGAG	1 cut(s)	716
SmiMI	CAYNNNNRTG	2 cut(s)	229, 1088
SmlI	CTYRAG	4 cut(s)	716, 1193, 1912, 1967
SmoI	CTYRAG	4 cut(s)	716, 1193, 1912, 1967
Sse9I	AATT	9 cut(s)	312, 459, 594, 753, 1365, 1374, 1434, 1794, 1956
SsiI	CCGC	7 cut(s)	26, 202, 1153, 1553, 1733, 1736, 1921
SspI	AATATT	1 cut(s)	493
SstI	GAGCTC	1 cut(s)	717
StyD4I	CCNGG	4 cut(s)	183, 245, 299, 763
TaaI	ACNGT	4 cut(s)	21, 451, 832, 1591
TaiI	ACGT	1 cut(s)	60
TaqI	TCGA	2 cut(s)	215, 717
TasI	AATT	9 cut(s)	312, 459, 594, 753, 1365, 1374, 1434, 1794, 1956
TatI	WGTACW	3 cut(s)	48, 1136, 1629
TauI	GCSGC	1 cut(s)	1736
TfiI	GAWTC	2 cut(s)	738, 1453
Tru1I	TTAA	1 cut(s)	258
Tru9I	TTAA	1 cut(s)	258
TscAI	CASTG	9 cut(s)	247, 299, 454, 835, 972, 1095, 1254, 1596, 1776
TseFI	GTSAC	3 cut(s)	15, 1090, 1548
TseI	GCWGC	7 cut(s)	90, 305, 511, 514, 566, 869, 1615
Tsp45I	GTSAC	3 cut(s)	15, 1090, 1548
TspDTI	ATGAA	5 cut(s)	653, 1072, 1263, 1893, 1922
TspRI	CASTG	9 cut(s)	247, 299, 454, 835, 972, 1095, 1254, 1596, 1776
VpaK11BI	GGWCC	4 cut(s)	297, 670, 779, 1572
XapI	RAATTY	1 cut(s)	1956
XceI	RCATGY	2 cut(s)	1532, 1870
XhoI	CTCGAG	1 cut(s)	716
XmiI	GTMKAC	1 cut(s)	687
ZraI	GACGTC	1 cut(s)	58
ZrmI	AGTACT	1 cut(s)	50

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.