Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0002991

Physical Location & Seq

Genomic Coordinates Reverse (-)

39680457 .. 39684001

Gene Structure 3545 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002782

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGCTAGCTCTGGGTCACGGTGTCCGCCGTTTGAGTTTTCCGGCAAGTACTACGACGTCGTGTCTGGAGATGGCTGTGGGAGGCAAAGCAGCTTCTTTGAAGGGAAAGCAGTCCTCAATCAGAGCGTTGGATATTCTGTTATTCTTGGCTTTGGAGCCTTCTTTGCTGTCTTCACATCTTTCCTGGTATGGCTGGAGAAGCGGTATGTTGGTTCGAAACACACATCCGAATGGTTCAACACTGCCGGAAGAAATGTTAAAACAGGGCTTATAGCTAGTGTGATTGTATCTCAGTGGACCTGGGCAGCTACAATTTTGCAAAGTTCAAATGTTGCTTGGCAGTATGGAGTAAGTGGCCCTTTCTGGTATGCTAGCGGAGCGACTATTCAGGTACTCTTGTTTGGTATAATGGCTATAGAGATTAAGAGAAAGGCTCCTCATGCTCACACTGTATGTGAAATTGTAAAAGCTCGCTGGGGCACGGCCGCACACATAGTCTTCCTCAGTTTCTGCTTTTTGACAAATATTATTGTAACGGCAATGCTGCTGCTCGGTGGTTCTGCCGTTGTAAATGCACTTACTGGAGTAAACATCTATGCTGCTAGCTTCCTGATACCTCTTGGAGTAATAGTCTACACTTTAGCTGGAGGTCTAAAAGCCACATTCTTGGCAAGCTATATACATTCTGTTATAGTTCATGTGGTCCTAGTCATATTTGTTTACCTTGTATATACGGCAAGCAATGAGCTCGGTAGCCCCAGAGTTGTGTACAACCATCTGGTAGAGGTAGCAAGTAAATCAAGAATCTGTCAGGAGCCAATTTCTCATCATGGGCAGTCTTGTGGTCCTGTTGGTGGGAATTACAAAGGGTCGTACCTAACAATGCTGAGTTCCGGAGGGCTAGTGTTCGGGATTATCAACATTGTTGGAAACTTTGGCACTGTTTTTGTTGACAATGGATATTGGGTAAGCGCCATAGCTGCACGGCCGTCATCAACTCACAAGGGTTACCTGTTGGGTGGGCTTGTCTGGTTTGCAGTCCCGTTCTCTTTGGCAACATCACTAGGTCTGGGAGCACTGGCCCTTGACTTACCGATAACAGCAAGTGAAGCAAGTCGTGGTCTTGTTCCTCCTGCCACAGCTATAGCTTTGATGGGAAAAGGAGGATCAGTTCTTCTTCTTACTATGCTCTTCATGGCAGTGACATCTGCTGGTTCTTCAGAGCTTATAGCAGTATCCTCATTATGTACATATGATATCTACCGCACATACATATATCCAGATGCAACTGGAAAGACAATCCTCAAGGTATCTAGGGCTGTCATCCTTGGTTTCGGATGTTTTATGGGGTTGTTAGCAGTGATACTAAACAAGGCAGGAGTTTCATTGGGTTGGATGTATCTAGCAATGGGAGTGCTCATTGGCTCAGCAGTACTCCCTATTGCTTTTATGCTTCTATGGAGAAAGGCAAATGCAATTGGAGCAATTCTAGGAGCAACCATTGGTTGTCTTCTTGGGATCATCACTTGGCTATCGGTTGCGAAAATTGAGTATGGCCGAGTGAATCTTGACACAACAGGCAGGAATGCACCAATGCTTGCCGGAAACCTTGTCTCTATACTTACTGGTGGCGCTATACATGCTTTCTGTAGCTTTGTGTCACCGCAAAACTACGATTGGGGCACCACTAAGCAGATCACAGTGGTTGAGAAGGAAAAGAGTGAGCTGCCAGCGGAAGAGTACAAGGAGGAGAAATTATTGAGAGCAAAAGCATGGATAGTGAAATGGGGTGTTGGATTTACTTTTGTGATTGTTTTGTTGTGGCCTCTTCTAAGTCTTCCAGCAGGGGATTTTAGTATAGGGTACTTCACATTCTGGACAGTGATTGCAATAGCATGGGGTACAATTGCTTCCATTGCCATCATTGCTTTACCGGTATTTGAGAGCTGGGAAACGATCCAGAGTGTCCTTCTGGGCATGTTTACAAATGACAGGCTCATGGAAAAGGTTGAAGAAATGAGCTTGAGGCTGCGCACAATCATGTTGGCTATACCAGAAGCAGAGAGAATTTACTTGCTTGAGATGGAGAAGGCCAAGAAGAACGAACCATTAGAGCAACTGCAACCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006995 GO:0007154 GO:0008150 GO:0008324 GO:0008519 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0015075 GO:0015101 GO:0015203 GO:0015204 GO:0015291 GO:0015293 GO:0015489 GO:0015606 GO:0015695 GO:0015696 GO:0015840 GO:0015846 GO:0015847 GO:0015848 GO:0016020 GO:0016021 GO:0019755 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034220 GO:0042594 GO:0042886 GO:0042887 GO:0043562 GO:0044425 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0071496 GO:0071702 GO:0071705 GO:0071918 GO:0071944 GO:0072488 GO:0098655 GO:1902047 GO:1903711

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SSF

Protein Analysis

710

Amino Acids

76.47

Weight (kDa)

8.87

Isoelectric Point (pI)

34.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SSF	PF00474	80 - 502	6.4e-19	Sodium:solute symporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45380
fragaria_vesca	FvH4_5g24140 FvH4_5g24140 FvH4_5g24140 FvH4_5g24140
malus_domestica	MD06G1017300.v1.1
prunus_persica	Prupe.5G019100_v2.0.a1
pyrus_communis	pycom06g01400 pycom06g01410
rosa_chinensis	RchiOBHm_Chr4g0401421 RchiOBHm_Chr4g0401521 RchiOBHm_Chr7g0213721 RchiOBHm_Chr7g0213811
rosa_laevigata	RLG00000002782 RLG00000002785 RLG00000002792 RLG00000009147
rosa_multiflora	Rmu_sc0000328.1_g000016 Rmu_sc0001524.1_g000047 Rmu_sc0002657.1_g000010 Rmu_sc0004549.1_g000018 Rmu_sc0006560.1_g000004
rosa_roxburghii	Rroxscaffold_3G00245690 Rroxscaffold_5G00346150
rosa_rugosa	Rorug04G0029700 Rorug04G0030000 Rorug04G0030100 Rorug07G0144600
rosa_samantha	Rh4AG107000 Rh4AG107300 Rh4AG107900 Rh4CG116200 Rh4DG099100 Rh7BG271000 Rh7DG283200
rosa_wichuraiana	Rw0G009180 Rw4G008720 Rw4G008750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	60
Acc16I	TGCGCA	1 cut(s)	2033
AccB1I	GGYRCC	1 cut(s)	1682
AccI	GTMKAC	1 cut(s)	633
AccIII	TCCGGA	1 cut(s)	893
AciI	CCGC	7 cut(s)	26, 202, 375, 486, 1264, 1664, 1733
AclWI	GGATC	3 cut(s)	1174, 1526, 1951
AcoI	YGGCCR	3 cut(s)	483, 986, 1555
AcsI	RAATTY	1 cut(s)	2067
AcuI	CTGAAG	1 cut(s)	1203
AcyI	GRCGYC	1 cut(s)	57
AfaI	GTAC	9 cut(s)	50, 393, 770, 875, 1249, 1434, 1742, 1865, 1903
AfiI	CCNNNNNNNGG	1 cut(s)	854
AgeI	ACCGGT	1 cut(s)	1933
AgsI	TTSAA	4 cut(s)	101, 238, 327, 2012
AhdI	GACNNNNNGTC	1 cut(s)	61
AjnI	CCWGG	2 cut(s)	183, 299
AloI	GAACNNNNNNTCC	2 cut(s)	1155, 1187
Alw21I	GWGCWC	3 cut(s)	750, 1078, 1419
Alw26I	GTCTC	1 cut(s)	1618
AlwI	GGATC	3 cut(s)	1174, 1526, 1951
AlwNI	CAGNNNCTG	1 cut(s)	510
Aor13HI	TCCGGA	1 cut(s)	893
AoxI	GGCC	7 cut(s)	355, 483, 986, 1080, 1555, 1823, 2091
ApeKI	GCWGC	8 cut(s)	90, 305, 544, 547, 599, 980, 1726, 2029
ApoI	RAATTY	1 cut(s)	2067
AsiGI	ACCGGT	1 cut(s)	1933
AspLEI	GCGC	3 cut(s)	974, 1634, 2034
AspS9I	GGNCC	5 cut(s)	297, 356, 703, 845, 1081
AsuHPI	GGTGA	1 cut(s)	1653
AsuII	TTCGAA	1 cut(s)	215
AsuNHI	GCTAGC	3 cut(s)	5, 371, 602
AvaII	GGWCC	3 cut(s)	297, 703, 845
BaeGI	GKGCMC	2 cut(s)	482, 1685
BaeI	ACNNNNGTAYC	2 cut(s)	383, 416
BanI	GGYRCC	1 cut(s)	1682
BanII	GRGCYC	1 cut(s)	750
BarI	GAAGNNNNNNTAC	2 cut(s)	1894, 1926
BbsI	GAAGAC	4 cut(s)	163, 490, 1502, 1829
Bbv12I	GWGCWC	3 cut(s)	750, 1078, 1419
BbvI	GCAGC	8 cut(s)	102, 317, 531, 534, 586, 967, 1713, 2016
BccI	CCATC	5 cut(s)	65, 783, 1147, 1928, 2077
BceAI	ACGGC	7 cut(s)	13, 498, 548, 552, 750, 973, 1001
BcgI	CGANNNNNNTGC	2 cut(s)	730, 764
BciT130I	CCWGG	2 cut(s)	185, 301
BciVI	GTATCC	1 cut(s)	1246
BcoDI	GTCTC	1 cut(s)	1618
BfmI	CTRYAG	3 cut(s)	414, 1143, 1648
BfoI	RGCGCY	2 cut(s)	975, 1635
BfuI	GTATCC	1 cut(s)	1246
BisI	GCNGC	9 cut(s)	91, 306, 486, 545, 548, 600, 981, 1727, 2030
BlpI	GCTNAGC	1 cut(s)	1426
BlsI	GCNGC	9 cut(s)	92, 307, 487, 546, 549, 601, 982, 1728, 2031
BmcAI	AGTACT	2 cut(s)	50, 1434
Bme1390I	CCNGG	2 cut(s)	185, 301
Bme18I	GGWCC	3 cut(s)	297, 703, 845
BmeRI	GACNNNNNGTC	1 cut(s)	61
BmgT120I	GGNCC	5 cut(s)	297, 356, 703, 845, 1081
BmiI	GGNNCC	4 cut(s)	157, 435, 816, 1684
BmrFI	CCNGG	2 cut(s)	185, 301
BmsI	GCATC	1 cut(s)	1273
BmtI	GCTAGC	3 cut(s)	9, 375, 606
BpiI	GAAGAC	4 cut(s)	163, 490, 1502, 1829
BplI	GAGNNNNNCTC	2 cut(s)	418, 450
BpmI	CTGGAG	4 cut(s)	87, 215, 603, 666
Bpu1102I	GCTNAGC	1 cut(s)	1426
Bpu14I	TTCGAA	1 cut(s)	215
BpuEI	CTTGAG	3 cut(s)	1289, 2044, 2099
BsaHI	GRCGYC	1 cut(s)	57
BsaJI	CCNNGG	2 cut(s)	300, 1327
BsaWI	WCCGGW	2 cut(s)	893, 1933
BsaXI	ACNNNNNCTCC	8 cut(s)	188, 218, 615, 645, 888, 918, 1155, 1185
Bsc4I	CCNNNNNNNGG	1 cut(s)	854
Bse118I	RCCGGY	1 cut(s)	1933
Bse1I	ACTGG	4 cut(s)	586, 1083, 1294, 1630
Bse3DI	GCAATG	5 cut(s)	546, 748, 1413, 1914, 1923
BseAI	TCCGGA	1 cut(s)	893
BseBI	CCWGG	2 cut(s)	185, 301
BseDI	CCNNGG	2 cut(s)	300, 1327
BseGI	GGATG	4 cut(s)	224, 1323, 1343, 1401
BseLI	CCNNNNNNNGG	1 cut(s)	854
BseMI	GCAATG	5 cut(s)	546, 748, 1413, 1914, 1923
BseMII	CTCAG	4 cut(s)	305, 517, 878, 1440
BseNI	ACTGG	4 cut(s)	586, 1083, 1294, 1630
BseRI	GAGGAG	2 cut(s)	426, 1763
BseSI	GKGCMC	2 cut(s)	482, 1685
BseX3I	CGGCCG	2 cut(s)	483, 986
BseXI	GCAGC	8 cut(s)	102, 317, 531, 534, 586, 967, 1713, 2016
BseYI	CCCAGC	2 cut(s)	474, 1947
BsgI	GTGCAG	1 cut(s)	966
Bsh1285I	CGRYCG	2 cut(s)	486, 989
BshFI	GGCC	7 cut(s)	357, 485, 988, 1082, 1557, 1825, 2093
BshNI	GGYRCC	1 cut(s)	1682
BshTI	ACCGGT	1 cut(s)	1933
BsiEI	CGRYCG	2 cut(s)	486, 989
BsiHKAI	GWGCWC	3 cut(s)	750, 1078, 1419
BsiSI	CCGG	5 cut(s)	42, 246, 894, 1602, 1934
BslFI	GGGAC	1 cut(s)	1025
BslI	CCNNNNNNNGG	1 cut(s)	854
BsmAI	GTCTC	1 cut(s)	1618
BsmFI	GGGAC	1 cut(s)	1025
BsmI	GAATGC	1 cut(s)	1591
BsnI	GGCC	7 cut(s)	357, 485, 988, 1082, 1557, 1825, 2093
Bsp119I	TTCGAA	1 cut(s)	215
Bsp1286I	GDGCHC	5 cut(s)	482, 750, 1078, 1419, 1685
Bsp13I	TCCGGA	1 cut(s)	893
Bsp1407I	TGTACA	2 cut(s)	768, 1247
Bsp143I	GATC	4 cut(s)	1166, 1518, 1695, 1956
Bsp1720I	GCTNAGC	1 cut(s)	1426
BspACI	CCGC	7 cut(s)	26, 202, 375, 486, 1264, 1664, 1733
BspANI	GGCC	7 cut(s)	357, 485, 988, 1082, 1557, 1825, 2093
BspCNI	CTCAG	4 cut(s)	304, 516, 879, 1439
BspEI	TCCGGA	1 cut(s)	893
BspLI	GGNNCC	4 cut(s)	157, 435, 816, 1684
BspOI	GCTAGC	3 cut(s)	9, 375, 606
BspPI	GGATC	3 cut(s)	1174, 1526, 1951
BspQI	GCTCTTC	1 cut(s)	1196
BspT104I	TTCGAA	1 cut(s)	215
BspT107I	GGYRCC	1 cut(s)	1682
BsrDI	GCAATG	5 cut(s)	546, 748, 1413, 1914, 1923
BsrFI	RCCGGY	1 cut(s)	1933
BsrGI	TGTACA	2 cut(s)	768, 1247
BsrI	ACTGG	4 cut(s)	586, 1083, 1294, 1630
BssAI	RCCGGY	1 cut(s)	1933
BssECI	CCNNGG	2 cut(s)	300, 1327
BssMI	GATC	4 cut(s)	1166, 1518, 1695, 1956
BssNI	GRCGYC	1 cut(s)	57
BssT1I	CCWWGG	1 cut(s)	1327
Bst2UI	CCWGG	2 cut(s)	185, 301
Bst4CI	ACNGT	5 cut(s)	21, 451, 943, 1702, 1882
Bst6I	CTCTTC	3 cut(s)	1196, 1731, 1833
BstACI	GRCGYC	1 cut(s)	57
BstAUI	TGTACA	2 cut(s)	768, 1247
BstBI	TTCGAA	1 cut(s)	215
BstC8I	GCNNGC	8 cut(s)	7, 373, 472, 604, 673, 739, 1599, 1731
BstDEI	CTNAG	6 cut(s)	291, 503, 887, 1426, 1689, 1832
BstEII	GGTNACC	1 cut(s)	1007
BstF5I	GGATG	4 cut(s)	224, 1323, 1343, 1401
BstH2I	RGCGCY	2 cut(s)	975, 1635
BstHHI	GCGC	3 cut(s)	974, 1634, 2034
BstKTI	GATC	4 cut(s)	1169, 1521, 1698, 1959
BstMAI	GTCTC	1 cut(s)	1618
BstMBI	GATC	4 cut(s)	1166, 1518, 1695, 1956
BstMCI	CGRYCG	2 cut(s)	486, 989
BstNI	CCWGG	2 cut(s)	185, 301
BstNSI	RCATGY	2 cut(s)	1643, 1981
BstPI	GGTNACC	1 cut(s)	1007
BstSCI	CCNGG	2 cut(s)	183, 299
BstSFI	CTRYAG	3 cut(s)	414, 1143, 1648
BstSLI	GKGCMC	2 cut(s)	482, 1685
BstV1I	GCAGC	8 cut(s)	102, 317, 531, 534, 586, 967, 1713, 2016
BstV2I	GAAGAC	4 cut(s)	163, 490, 1502, 1829
BstXI	CCANNNNNNTGG	1 cut(s)	667
BstZI	CGGCCG	2 cut(s)	483, 986
BsuI	GTATCC	1 cut(s)	1246
BsuRI	GGCC	7 cut(s)	357, 485, 988, 1082, 1557, 1825, 2093
BtsCI	GGATG	4 cut(s)	224, 1323, 1343, 1401
BtsI	GCAGTG	3 cut(s)	240, 1206, 1365
BtsIMutI	CAGTG	9 cut(s)	240, 299, 447, 939, 1076, 1206, 1365, 1707, 1887
Cac8I	GCNNGC	8 cut(s)	7, 373, 472, 604, 673, 739, 1599, 1731
CaiI	CAGNNNCTG	1 cut(s)	510
CfoI	GCGC	3 cut(s)	974, 1634, 2034
Cfr10I	RCCGGY	1 cut(s)	1933
Cfr13I	GGNCC	5 cut(s)	297, 356, 703, 845, 1081
Csp6I	GTAC	9 cut(s)	49, 392, 769, 874, 1248, 1433, 1741, 1864, 1902
CspAI	ACCGGT	1 cut(s)	1933
CviQI	GTAC	9 cut(s)	49, 392, 769, 874, 1248, 1433, 1741, 1864, 1902
DdeI	CTNAG	6 cut(s)	291, 503, 887, 1426, 1689, 1832
DpnI	GATC	4 cut(s)	1168, 1520, 1697, 1958
DpnII	GATC	4 cut(s)	1166, 1518, 1695, 1956
DriI	GACNNNNNGTC	1 cut(s)	61
EaeI	YGGCCR	3 cut(s)	483, 986, 1555
EagI	CGGCCG	2 cut(s)	483, 986
Eam1104I	CTCTTC	3 cut(s)	1196, 1731, 1833
Eam1105I	GACNNNNNGTC	1 cut(s)	61
EarI	CTCTTC	3 cut(s)	1196, 1731, 1833
EciI	GGCGGA	1 cut(s)	15
Ecl136II	GAGCTC	1 cut(s)	748
EclXI	CGGCCG	2 cut(s)	483, 986
Eco130I	CCWWGG	1 cut(s)	1327
Eco24I	GRGCYC	1 cut(s)	750
Eco32I	GATATC	1 cut(s)	1258
Eco47I	GGWCC	3 cut(s)	297, 703, 845
Eco52I	CGGCCG	2 cut(s)	483, 986
Eco53kI	GAGCTC	1 cut(s)	748
Eco57I	CTGAAG	1 cut(s)	1203
Eco91I	GGTNACC	1 cut(s)	1007
EcoICRI	GAGCTC	1 cut(s)	748
EcoO65I	GGTNACC	1 cut(s)	1007
EcoRII	CCWGG	2 cut(s)	183, 299
EcoRV	GATATC	1 cut(s)	1258
EcoT14I	CCWWGG	1 cut(s)	1327
EcoT38I	GRGCYC	1 cut(s)	750
ErhI	CCWWGG	1 cut(s)	1327
FalI	AAGNNNNNCTT	2 cut(s)	343, 375
FaqI	GGGAC	1 cut(s)	1025
FauNDI	CATATG	1 cut(s)	1252
FblI	GTMKAC	1 cut(s)	633
Fnu4HI	GCNGC	9 cut(s)	91, 306, 486, 545, 548, 600, 981, 1727, 2030
FokI	GGATG	4 cut(s)	211, 1310, 1350, 1408
FriOI	GRGCYC	1 cut(s)	750
Fsp4HI	GCNGC	9 cut(s)	91, 306, 486, 545, 548, 600, 981, 1727, 2030
FspI	TGCGCA	1 cut(s)	2033
GlaI	GCGC	3 cut(s)	973, 1633, 2033
GluI	GCNGC	9 cut(s)	91, 306, 486, 545, 548, 600, 981, 1727, 2030
GsaI	CCCAGC	2 cut(s)	478, 1951
GsuI	CTGGAG	4 cut(s)	87, 215, 603, 666
HaeII	RGCGCY	2 cut(s)	975, 1635
HaeIII	GGCC	7 cut(s)	357, 485, 988, 1082, 1557, 1825, 2093
HapII	CCGG	5 cut(s)	42, 246, 894, 1602, 1934
HhaI	GCGC	3 cut(s)	974, 1634, 2034
Hin1I	GRCGYC	1 cut(s)	57
Hin6I	GCGC	3 cut(s)	972, 1632, 2032
HinP1I	GCGC	3 cut(s)	972, 1632, 2032
HincII	GTYRAC	1 cut(s)	952
HindII	GTYRAC	1 cut(s)	952
HinfI	GANTC	2 cut(s)	804, 1564
HpaII	CCGG	5 cut(s)	42, 246, 894, 1602, 1934
HphI	GGTGA	1 cut(s)	1653
Hpy166II	GTNNAC	7 cut(s)	297, 589, 634, 721, 769, 952, 1983
Hpy188I	TCNGA	4 cut(s)	123, 229, 1222, 1337
Hpy8I	GTNNAC	7 cut(s)	297, 589, 634, 721, 769, 952, 1983
Hpy99I	CGWCG	2 cut(s)	59, 62
HpyAV	CCTTC	5 cut(s)	95, 169, 1705, 1979, 2083
HpyCH4III	ACNGT	5 cut(s)	21, 451, 943, 1702, 1882
HpyCH4IV	ACGT	1 cut(s)	57
HpyCH4V	TGCA	9 cut(s)	319, 575, 983, 1037, 1286, 1475, 1589, 1889, 2122
HpyF3I	CTNAG	6 cut(s)	291, 503, 887, 1426, 1689, 1832
HpySE526I	ACGT	1 cut(s)	57
Hsp92I	GRCGYC	1 cut(s)	57
HspAI	GCGC	3 cut(s)	972, 1632, 2032
Kpn2I	TCCGGA	1 cut(s)	893
Kzo9I	GATC	4 cut(s)	1166, 1518, 1695, 1956
LguI	GCTCTTC	1 cut(s)	1196
LmnI	GCTCC	7 cut(s)	155, 377, 439, 814, 1073, 1481, 1493
Lsp1109I	GCAGC	8 cut(s)	102, 317, 531, 534, 586, 967, 1713, 2016
LweI	GCATC	1 cut(s)	1273
MaeII	ACGT	1 cut(s)	57
MaeIII	GTNAC	5 cut(s)	15, 532, 1007, 1201, 1659
MalI	GATC	4 cut(s)	1168, 1520, 1697, 1958
MboI	GATC	4 cut(s)	1166, 1518, 1695, 1956
MfeI	CAATTG	2 cut(s)	1476, 1905
MhlI	GDGCHC	5 cut(s)	482, 750, 1078, 1419, 1685
MmeI	TCCRAC	4 cut(s)	109, 907, 1373, 1774
MroI	TCCGGA	1 cut(s)	893
MseI	TTAA	2 cut(s)	258, 423
MslI	CAYNNNNRTG	3 cut(s)	229, 1199, 2039
MspA1I	CMGCKG	1 cut(s)	1733
MspI	CCGG	5 cut(s)	42, 246, 894, 1602, 1934
MspR9I	CCNGG	2 cut(s)	185, 301
MunI	CAATTG	2 cut(s)	1476, 1905
Mva1269I	GAATGC	1 cut(s)	1591
MvaI	CCWGG	2 cut(s)	185, 301
NdeI	CATATG	1 cut(s)	1252
NdeII	GATC	4 cut(s)	1166, 1518, 1695, 1956
NheI	GCTAGC	3 cut(s)	5, 371, 602
NlaIV	GGNNCC	4 cut(s)	157, 435, 816, 1684
NmeAIII	GCCGAG	1 cut(s)	1583
NmuCI	GTSAC	3 cut(s)	15, 1201, 1659
NsbI	TGCGCA	1 cut(s)	2033
NspI	RCATGY	2 cut(s)	1643, 1981
NspV	TTCGAA	1 cut(s)	215
PciSI	GCTCTTC	1 cut(s)	1196
PctI	GAATGC	1 cut(s)	1591
PfeI	GAWTC	2 cut(s)	804, 1564
PinAI	ACCGGT	1 cut(s)	1933
PkrI	GCNGC	9 cut(s)	92, 307, 487, 546, 549, 601, 982, 1728, 2031
Psp124BI	GAGCTC	1 cut(s)	750
Psp6I	CCWGG	2 cut(s)	183, 299
PspEI	GGTNACC	1 cut(s)	1007
PspFI	CCCAGC	2 cut(s)	474, 1947
PspGI	CCWGG	2 cut(s)	183, 299
PspN4I	GGNNCC	4 cut(s)	157, 435, 816, 1684
PspPI	GGNCC	5 cut(s)	297, 356, 703, 845, 1081
PstNI	CAGNNNCTG	1 cut(s)	510
RsaI	GTAC	9 cut(s)	50, 393, 770, 875, 1249, 1434, 1742, 1865, 1903
RsaNI	GTAC	9 cut(s)	49, 392, 769, 874, 1248, 1433, 1741, 1864, 1902
RseI	CAYNNNNRTG	3 cut(s)	229, 1199, 2039
SacI	GAGCTC	1 cut(s)	750
SapI	GCTCTTC	1 cut(s)	1196
SaqAI	TTAA	2 cut(s)	258, 423
SatI	GCNGC	9 cut(s)	91, 306, 486, 545, 548, 600, 981, 1727, 2030
Sau3AI	GATC	4 cut(s)	1166, 1518, 1695, 1956
Sau96I	GGNCC	5 cut(s)	297, 356, 703, 845, 1081
ScaI	AGTACT	2 cut(s)	50, 1434
ScrFI	CCNGG	2 cut(s)	185, 301
SduI	GDGCHC	5 cut(s)	482, 750, 1078, 1419, 1685
SfaNI	GCATC	1 cut(s)	1273
SfcI	CTRYAG	3 cut(s)	414, 1143, 1648
SfuI	TTCGAA	1 cut(s)	215
SinI	GGWCC	3 cut(s)	297, 703, 845
SmiMI	CAYNNNNRTG	3 cut(s)	229, 1199, 2039
SmlI	CTYRAG	3 cut(s)	1304, 2023, 2078
SmoI	CTYRAG	3 cut(s)	1304, 2023, 2078
SsiI	CCGC	7 cut(s)	26, 202, 375, 486, 1264, 1664, 1733
SspI	AATATT	1 cut(s)	526
SstI	GAGCTC	1 cut(s)	750
StyD4I	CCNGG	2 cut(s)	183, 299
StyI	CCWWGG	1 cut(s)	1327
TaaI	ACNGT	5 cut(s)	21, 451, 943, 1702, 1882
TaiI	ACGT	1 cut(s)	60
TaqI	TCGA	1 cut(s)	215
TatI	WGTACW	5 cut(s)	48, 768, 1247, 1432, 1740
TauI	GCSGC	1 cut(s)	488
TfiI	GAWTC	2 cut(s)	804, 1564
Tru1I	TTAA	2 cut(s)	258, 423
Tru9I	TTAA	2 cut(s)	258, 423
TscAI	CASTG	9 cut(s)	247, 299, 454, 946, 1083, 1206, 1365, 1707, 1887
TseFI	GTSAC	3 cut(s)	15, 1201, 1659
TseI	GCWGC	8 cut(s)	90, 305, 544, 547, 599, 980, 1726, 2029
Tsp45I	GTSAC	3 cut(s)	15, 1201, 1659
TspDTI	ATGAA	3 cut(s)	686, 1183, 1374
TspRI	CASTG	9 cut(s)	247, 299, 454, 946, 1083, 1206, 1365, 1707, 1887
VpaK11BI	GGWCC	3 cut(s)	297, 703, 845
XapI	RAATTY	1 cut(s)	2067
XceI	RCATGY	2 cut(s)	1643, 1981
XmiI	GTMKAC	1 cut(s)	633
ZraI	GACGTC	1 cut(s)	58
ZrmI	AGTACT	2 cut(s)	50, 1434

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.