Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0002991

Physical Location & Seq

Genomic Coordinates Forward (+)

23118965 .. 23122646

Gene Structure 3682 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG107000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGCAAGCTCCGGGTCACGGTGTCCACCGTTCGACTTTTCCAGCAAGTACTACGACGTTGTGTCTGGAGATGGCTGCAGGAGGCAAAGCAGCTTCTTTGAAGGGAAAGCAGTGCTCAGTCAGAGCGTTGGATATTCTGTTATTCTTGGCTTTGGAGCCTTCTTTGCTATCTTCACATCTTTCCTGGTATGGCTGGAGAAGCGGTATGTTGGTTCGAAGTACACATCCGAATGGTTCAACACTGCCGGAAGAAATGTTAAAACGGGGCTTCTAGCTAGTGTGATTGTATCTCAGTGGACATGGGCAGCTACAATTTTGCAAAGTTCAAATGTTGCTTGGCAGTATGGAGTAAGTGGACCTTTCTGGTATGCTAGTGGAGCGACTATTCAGGTACTCTTGTTTGGTATAATGGCTATCGAGATCAAGAGAAAGGCTCCTCATGCTCACACTGTATGCGAAATTGTAAAAGCTCGCTGGGGCACGGCCACACACATAGTCTTCCTCAGTTTCTGCTTTTTGACAAATATTATTGTAACGGCAATGCTGCTGCTCGGTGGTTCTGCCATTGTAAATGTACTTACCGGAGTAAATATCTATGCTGCTTGCTTCCTGATACCTCTTGGAGTAGTTGTCTACACTTTAGCTGGAGGTCTAAAAGCCATATTCTTGGCAAGCTATATACATTCTGTTATAGTTCACGTGGTCCTAGTCATATTTGTTTACCTTGTATATATGGCAAGCAATGAGCTCGGTAGCCCCAGAGTTATGTACGACCGTCTGGTAGAGGTAGCAAGCAAATCAAGAATCTGTCAGGAGCCAATTTCTCATCATGGGCAGTCTTGTGGTCCTGTTGGTGGGAATTACAAAGGGTCGTACCTAACAATGCTGAGTTCCAGAGGGCTAGTGTTCGGGATTATCAACATTGTTGGAAACTTTGGCACTGTTTTTGTTGACAATGGATATTGGGTAAGCGCCATAGCTGCACGGGCGTCATCAACTCACAAGGGGTACTTGTTAGGTGGGCTTGTCTGGTTTGCAGTCCCATTCTCTCTGGGAACTTCACTAGGTCTGGGAGCACTGGCACTTGACTTACCAATAACAGAAAGTGAAGCAAGTCGTGGTCTTGTTCCTCCTGCAACAGCTGTAGCTTTGATGGGAAAAGGAGGATCAGTTCTTCTTCTTACTATGCTCTTCATGGCAGTGACATCTGCTGGTTCTTCAGAGCTTATAGCAGTATCCTCATTATGTACATATGATATCTACCGCACATACATAAATCCAGATGCAACTGGAAAGACAATCCTCAAGGTCTCTATGGCTGTCATCTTTGGTTTCGGATGCTTTATGGGGTTGTTAGCAGCGATACTAAACAAGGCAGGAGTTTCATTGGATTGGATATATCTGGCAATGGGAGTGCTCATTGGCTCTGCAGTGCTTCCCATTGCTTTTATGCTTCTATGGAGAAAGGCAAATGCAATTGGAGCAATTCTAGGAGCAACCATTGGTTGTCTTCTTGGGATCATCACTTGGCTATCGGTTGCGAAAATTGAATATGGCCGAGTGAATCTTGACACAACAGGTAGGAATGCACCAATGCTTGCTGGAAACCTTGTCTCTATACTTACTGGTGGTGCTATACATGCTATCTGTAGCTTTGTGTCACCACAAAACTACGACTGGGGCACAACCAAGCAGATCACATTGGTTGAGGAGGAAAAGAGTGAGCTGCCAGCCGAAGAGTACAAGGAGGAGAAATTATTGAGAGCAAAAGCATGGATAGTGAAATGGGGTGTTGGATTTACTTTTGTGATTGTTTTGTTGTGGCCTCTTCTAAGTCTTCCAGCAGGGGATTTTAGCATAGGGTACTTCACATTCTGGGCAGTGATTGCAATAGCATGGGGTACAATTGGTTCTATTGTCATCATTGCTTTTCCGGTATTCGAGAGCTGGGAAACGATCCAGAGTGTCCTTCGGTGCATGTTTACAAATGACAGGCTCATGGAAAACGTTGAAGAAATGAACTTGAGGATGCGCGCAATCATGTTGGCTATACCAGAAGCAGAGAGAATTTACTTGCTTGAGAAGGAGAAGGCTAAGAACAAAGAACCAATAGAGCAACTGCAACCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006950 GO:0006995 GO:0007154 GO:0008150 GO:0008324 GO:0008519 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0015075 GO:0015101 GO:0015203 GO:0015204 GO:0015291 GO:0015293 GO:0015489 GO:0015606 GO:0015695 GO:0015696 GO:0015840 GO:0015846 GO:0015847 GO:0015848 GO:0016020 GO:0016021 GO:0019755 GO:0022804 GO:0022857 GO:0031224 GO:0031226 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034220 GO:0042594 GO:0042886 GO:0042887 GO:0043562 GO:0044425 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0071496 GO:0071702 GO:0071705 GO:0071918 GO:0071944 GO:0072488 GO:0098655 GO:1902047 GO:1903711

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SSF

Protein Analysis

709

Amino Acids

76.92

Weight (kDa)

8.65

Isoelectric Point (pI)

38.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SSF	PF00474	80 - 502	1.3e-19	Sodium:solute symporter family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G45380
fragaria_vesca	FvH4_5g24140 FvH4_5g24140 FvH4_5g24140 FvH4_5g24140
malus_domestica	MD06G1017300.v1.1
prunus_persica	Prupe.5G019100_v2.0.a1
pyrus_communis	pycom06g01400 pycom06g01410
rosa_chinensis	RchiOBHm_Chr4g0401421 RchiOBHm_Chr4g0401521 RchiOBHm_Chr7g0213721 RchiOBHm_Chr7g0213811
rosa_laevigata	RLG00000002782 RLG00000002785 RLG00000002792 RLG00000009147
rosa_multiflora	Rmu_sc0000328.1_g000016 Rmu_sc0001524.1_g000047 Rmu_sc0002657.1_g000010 Rmu_sc0004549.1_g000018 Rmu_sc0006560.1_g000004
rosa_roxburghii	Rroxscaffold_3G00245690 Rroxscaffold_5G00346150
rosa_rugosa	Rorug04G0029700 Rorug04G0030000 Rorug04G0030100 Rorug07G0144600
rosa_samantha	Rh4AG107000 Rh4AG107300 Rh4AG107900 Rh4CG116200 Rh4DG099100 Rh7BG271000 Rh7DG283200
rosa_wichuraiana	Rw0G009180 Rw4G008720 Rw4G008750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	633
AccII	CGCG	1 cut(s)	2034
AciI	CCGC	2 cut(s)	202, 1264
AclI	AACGTT	1 cut(s)	2007
AclWI	GGATC	3 cut(s)	1174, 1526, 1951
AcoI	YGGCCR	2 cut(s)	483, 1555
AcsI	RAATTY	1 cut(s)	2067
AcuI	CTGAAG	1 cut(s)	1203
AcvI	CACGTG	1 cut(s)	700
AcyI	GRCGYC	1 cut(s)	989
AfiI	CCNNNNNNNGG	2 cut(s)	18, 854
AgsI	TTSAA	5 cut(s)	101, 238, 327, 1550, 2012
AhdI	GACNNNNNGTC	1 cut(s)	61
AjnI	CCWGG	1 cut(s)	183
AloI	GAACNNNNNNTCC	2 cut(s)	1155, 1187
Alw21I	GWGCWC	4 cut(s)	117, 750, 1078, 1419
Alw26I	GTCTC	2 cut(s)	1315, 1618
AlwI	GGATC	3 cut(s)	1174, 1526, 1951
AlwNI	CAGNNNCTG	1 cut(s)	510
AoxI	GGCC	3 cut(s)	483, 1555, 1823
ApeKI	GCWGC	9 cut(s)	75, 90, 305, 544, 547, 599, 980, 1358, 1726
ApoI	RAATTY	1 cut(s)	2067
AspLEI	GCGC	3 cut(s)	974, 2034, 2036
AspS9I	GGNCC	3 cut(s)	356, 703, 845
AsuC2I	CCSGG	1 cut(s)	13
AsuHPI	GGTGA	1 cut(s)	1653
AsuII	TTCGAA	1 cut(s)	215
AvaII	GGWCC	3 cut(s)	356, 703, 845
BaeGI	GKGCMC	2 cut(s)	482, 1685
BaeI	ACNNNNGTAYC	2 cut(s)	383, 416
BanII	GRGCYC	1 cut(s)	750
BbrPI	CACGTG	1 cut(s)	700
BbsI	GAAGAC	3 cut(s)	490, 1502, 1829
Bbv12I	GWGCWC	4 cut(s)	117, 750, 1078, 1419
BbvI	GCAGC	9 cut(s)	62, 102, 317, 531, 534, 586, 967, 1370, 1713
BccI	CCATC	2 cut(s)	65, 1147
BceAI	ACGGC	2 cut(s)	498, 552
BcgI	CGANNNNNNTGC	2 cut(s)	730, 764
BciT130I	CCWGG	1 cut(s)	185
BciVI	GTATCC	1 cut(s)	1246
BcnI	CCSGG	1 cut(s)	13
BcoDI	GTCTC	2 cut(s)	1315, 1618
BfaI	CTAG	7 cut(s)	272, 276, 372, 707, 902, 1064, 1490
BfmI	CTRYAG	4 cut(s)	76, 1143, 1428, 1648
BfoI	RGCGCY	1 cut(s)	975
BfuI	GTATCC	1 cut(s)	1246
BisI	GCNGC	9 cut(s)	76, 91, 306, 545, 548, 600, 981, 1359, 1727
BlsI	GCNGC	9 cut(s)	77, 92, 307, 546, 549, 601, 982, 1360, 1728
BmcAI	AGTACT	1 cut(s)	50
Bme1390I	CCNGG	2 cut(s)	13, 185
Bme18I	GGWCC	3 cut(s)	356, 703, 845
BmeRI	GACNNNNNGTC	1 cut(s)	61
BmgT120I	GGNCC	3 cut(s)	356, 703, 845
BmiI	GGNNCC	3 cut(s)	157, 435, 816
BmrFI	CCNGG	2 cut(s)	13, 185
BmrI	ACTGGG	1 cut(s)	1687
BmsI	GCATC	3 cut(s)	1273, 1328, 2019
BmuI	ACTGGG	1 cut(s)	1687
BpiI	GAAGAC	3 cut(s)	490, 1502, 1829
BplI	GAGNNNNNCTC	2 cut(s)	418, 450
BpmI	CTGGAG	3 cut(s)	87, 215, 666
Bpu14I	TTCGAA	1 cut(s)	215
BpuEI	CTTGAG	3 cut(s)	1289, 2044, 2099
BpuMI	CCSGG	1 cut(s)	13
BsaAI	YACGTR	1 cut(s)	700
BsaHI	GRCGYC	1 cut(s)	989
BsaI	GGTCTC	1 cut(s)	1315
BsaWI	WCCGGW	2 cut(s)	581, 1933
BsaXI	ACNNNNNCTCC	6 cut(s)	188, 218, 615, 645, 1155, 1185
Bsc4I	CCNNNNNNNGG	2 cut(s)	18, 854
Bse1I	ACTGG	4 cut(s)	1083, 1294, 1630, 1682
Bse3DI	GCAATG	5 cut(s)	546, 748, 1413, 1440, 1923
BseBI	CCWGG	1 cut(s)	185
BseGI	GGATG	3 cut(s)	224, 1343, 2034
BseLI	CCNNNNNNNGG	2 cut(s)	18, 854
BseMI	GCAATG	5 cut(s)	546, 748, 1413, 1440, 1923
BseMII	CTCAG	4 cut(s)	130, 305, 517, 878
BseNI	ACTGG	4 cut(s)	1083, 1294, 1630, 1682
BsePI	GCGCGC	1 cut(s)	2032
BseRI	GAGGAG	3 cut(s)	426, 1724, 1763
BseSI	GKGCMC	2 cut(s)	482, 1685
BseXI	GCAGC	9 cut(s)	62, 102, 317, 531, 534, 586, 967, 1370, 1713
BseYI	CCCAGC	2 cut(s)	474, 1947
BsgI	GTGCAG	1 cut(s)	966
Bsh1236I	CGCG	1 cut(s)	2034
Bsh1285I	CGRYCG	1 cut(s)	775
BshFI	GGCC	3 cut(s)	485, 1557, 1825
BsiEI	CGRYCG	1 cut(s)	775
BsiHKAI	GWGCWC	4 cut(s)	117, 750, 1078, 1419
BsiSI	CCGG	4 cut(s)	12, 246, 582, 1934
BslFI	GGGAC	1 cut(s)	1025
BslI	CCNNNNNNNGG	2 cut(s)	18, 854
BsmAI	GTCTC	2 cut(s)	1315, 1618
BsmFI	GGGAC	1 cut(s)	1025
BsmI	GAATGC	1 cut(s)	1591
BsnI	GGCC	3 cut(s)	485, 1557, 1825
Bso31I	GGTCTC	1 cut(s)	1315
Bsp119I	TTCGAA	1 cut(s)	215
Bsp1286I	GDGCHC	6 cut(s)	117, 482, 750, 1078, 1419, 1685
Bsp1407I	TGTACA	1 cut(s)	1247
Bsp143I	GATC	5 cut(s)	420, 1166, 1518, 1695, 1956
BspACI	CCGC	2 cut(s)	202, 1264
BspANI	GGCC	3 cut(s)	485, 1557, 1825
BspCNI	CTCAG	4 cut(s)	129, 304, 516, 879
BspFNI	CGCG	1 cut(s)	2034
BspLI	GGNNCC	3 cut(s)	157, 435, 816
BspMAI	CTGCAG	2 cut(s)	80, 1432
BspPI	GGATC	3 cut(s)	1174, 1526, 1951
BspQI	GCTCTTC	1 cut(s)	1196
BspT104I	TTCGAA	1 cut(s)	215
BspTNI	GGTCTC	1 cut(s)	1315
BsrDI	GCAATG	5 cut(s)	546, 748, 1413, 1440, 1923
BsrGI	TGTACA	1 cut(s)	1247
BsrI	ACTGG	4 cut(s)	1083, 1294, 1630, 1682
BssHII	GCGCGC	1 cut(s)	2032
BssMI	GATC	5 cut(s)	420, 1166, 1518, 1695, 1956
BssNI	GRCGYC	1 cut(s)	989
Bst2UI	CCWGG	1 cut(s)	185
Bst4CI	ACNGT	5 cut(s)	21, 30, 451, 776, 943
Bst6I	CTCTTC	3 cut(s)	1196, 1731, 1833
BstACI	GRCGYC	1 cut(s)	989
BstAPI	GCANNNNNTGC	1 cut(s)	1886
BstAUI	TGTACA	1 cut(s)	1247
BstBAI	YACGTR	1 cut(s)	700
BstBI	TTCGAA	1 cut(s)	215
BstC8I	GCNNGC	9 cut(s)	7, 472, 604, 673, 739, 793, 1599, 1731, 2034
BstDEI	CTNAG	6 cut(s)	116, 291, 503, 887, 1832, 2094
BstF5I	GGATG	3 cut(s)	224, 1343, 2034
BstFNI	CGCG	1 cut(s)	2034
BstH2I	RGCGCY	1 cut(s)	975
BstHHI	GCGC	3 cut(s)	974, 2034, 2036
BstKTI	GATC	5 cut(s)	423, 1169, 1521, 1698, 1959
BstMAI	GTCTC	2 cut(s)	1315, 1618
BstMBI	GATC	5 cut(s)	420, 1166, 1518, 1695, 1956
BstMCI	CGRYCG	1 cut(s)	775
BstMWI	GCNNNNNNNGC	9 cut(s)	164, 199, 377, 440, 980, 986, 1481, 1640, 1886
BstNI	CCWGG	1 cut(s)	185
BstNSI	RCATGY	2 cut(s)	1643, 1981
BstSCI	CCNGG	2 cut(s)	11, 183
BstSFI	CTRYAG	4 cut(s)	76, 1143, 1428, 1648
BstSLI	GKGCMC	2 cut(s)	482, 1685
BstUI	CGCG	1 cut(s)	2034
BstV1I	GCAGC	9 cut(s)	62, 102, 317, 531, 534, 586, 967, 1370, 1713
BstV2I	GAAGAC	3 cut(s)	490, 1502, 1829
BstXI	CCANNNNNNTGG	1 cut(s)	667
BsuI	GTATCC	1 cut(s)	1246
BsuRI	GGCC	3 cut(s)	485, 1557, 1825
BtsCI	GGATG	3 cut(s)	224, 1343, 2034
BtsI	GCAGTG	5 cut(s)	117, 240, 1206, 1437, 1887
BtsIMutI	CAGTG	9 cut(s)	117, 240, 299, 447, 939, 1076, 1206, 1437, 1887
Cac8I	GCNNGC	9 cut(s)	7, 472, 604, 673, 739, 793, 1599, 1731, 2034
CaiI	CAGNNNCTG	1 cut(s)	510
CfoI	GCGC	3 cut(s)	974, 2034, 2036
Cfr13I	GGNCC	3 cut(s)	356, 703, 845
CseI	GACGC	1 cut(s)	978
DdeI	CTNAG	6 cut(s)	116, 291, 503, 887, 1832, 2094
DpnI	GATC	5 cut(s)	422, 1168, 1520, 1697, 1958
DpnII	GATC	5 cut(s)	420, 1166, 1518, 1695, 1956
DriI	GACNNNNNGTC	1 cut(s)	61
EaeI	YGGCCR	2 cut(s)	483, 1555
Eam1104I	CTCTTC	3 cut(s)	1196, 1731, 1833
Eam1105I	GACNNNNNGTC	1 cut(s)	61
EarI	CTCTTC	3 cut(s)	1196, 1731, 1833
Ecl136II	GAGCTC	1 cut(s)	748
Eco24I	GRGCYC	1 cut(s)	750
Eco31I	GGTCTC	1 cut(s)	1315
Eco32I	GATATC	1 cut(s)	1258
Eco47I	GGWCC	3 cut(s)	356, 703, 845
Eco53kI	GAGCTC	1 cut(s)	748
Eco57I	CTGAAG	1 cut(s)	1203
Eco72I	CACGTG	1 cut(s)	700
EcoICRI	GAGCTC	1 cut(s)	748
EcoRII	CCWGG	1 cut(s)	183
EcoRV	GATATC	1 cut(s)	1258
EcoT38I	GRGCYC	1 cut(s)	750
FalI	AAGNNNNNCTT	4 cut(s)	343, 375, 995, 1027
FaqI	GGGAC	1 cut(s)	1025
FauNDI	CATATG	1 cut(s)	1252
FblI	GTMKAC	1 cut(s)	633
Fnu4HI	GCNGC	9 cut(s)	76, 91, 306, 545, 548, 600, 981, 1359, 1727
FokI	GGATG	3 cut(s)	211, 1350, 2041
FriOI	GRGCYC	1 cut(s)	750
Fsp4HI	GCNGC	9 cut(s)	76, 91, 306, 545, 548, 600, 981, 1359, 1727
FspBI	CTAG	7 cut(s)	272, 276, 372, 707, 902, 1064, 1490
GlaI	GCGC	3 cut(s)	973, 2033, 2035
GluI	GCNGC	9 cut(s)	76, 91, 306, 545, 548, 600, 981, 1359, 1727
GsaI	CCCAGC	2 cut(s)	478, 1951
GsuI	CTGGAG	3 cut(s)	87, 215, 666
HaeII	RGCGCY	1 cut(s)	975
HaeIII	GGCC	3 cut(s)	485, 1557, 1825
HapII	CCGG	4 cut(s)	12, 246, 582, 1934
HgaI	GACGC	1 cut(s)	978
HhaI	GCGC	3 cut(s)	974, 2034, 2036
Hin1I	GRCGYC	1 cut(s)	989
Hin6I	GCGC	3 cut(s)	972, 2032, 2034
HinP1I	GCGC	3 cut(s)	972, 2032, 2034
HincII	GTYRAC	1 cut(s)	952
HindII	GTYRAC	1 cut(s)	952
HinfI	GANTC	2 cut(s)	804, 1564
HpaII	CCGG	4 cut(s)	12, 246, 582, 1934
HphI	GGTGA	1 cut(s)	1653
Hpy166II	GTNNAC	9 cut(s)	26, 222, 297, 356, 634, 697, 721, 952, 1983
Hpy188I	TCNGA	4 cut(s)	123, 229, 1222, 1337
Hpy8I	GTNNAC	9 cut(s)	26, 222, 297, 356, 634, 697, 721, 952, 1983
Hpy99I	CGWCG	1 cut(s)	59
HpyAV	CCTTC	5 cut(s)	95, 169, 1979, 2077, 2083
HpyCH4III	ACNGT	5 cut(s)	21, 30, 451, 776, 943
HpyCH4IV	ACGT	3 cut(s)	57, 699, 2007
HpyF10VI	GCNNNNNNNGC	9 cut(s)	164, 199, 377, 440, 980, 986, 1481, 1640, 1886
HpyF3I	CTNAG	6 cut(s)	116, 291, 503, 887, 1832, 2094
HpySE526I	ACGT	3 cut(s)	57, 699, 2007
Hsp92I	GRCGYC	1 cut(s)	989
HspAI	GCGC	3 cut(s)	972, 2032, 2034
Kzo9I	GATC	5 cut(s)	420, 1166, 1518, 1695, 1956
LguI	GCTCTTC	1 cut(s)	1196
LmnI	GCTCC	8 cut(s)	14, 155, 377, 439, 814, 1073, 1481, 1493
Lsp1109I	GCAGC	9 cut(s)	62, 102, 317, 531, 534, 586, 967, 1370, 1713
LweI	GCATC	3 cut(s)	1273, 1328, 2019
MaeI	CTAG	7 cut(s)	272, 276, 372, 707, 902, 1064, 1490
MaeII	ACGT	3 cut(s)	57, 699, 2007
MaeIII	GTNAC	4 cut(s)	15, 532, 1201, 1659
MalI	GATC	5 cut(s)	422, 1168, 1520, 1697, 1958
MboI	GATC	5 cut(s)	420, 1166, 1518, 1695, 1956
MfeI	CAATTG	2 cut(s)	1476, 1905
MhlI	GDGCHC	6 cut(s)	117, 482, 750, 1078, 1419, 1685
MmeI	TCCRAC	3 cut(s)	109, 907, 1774
MseI	TTAA	1 cut(s)	258
MslI	CAYNNNNRTG	2 cut(s)	229, 1199
MspA1I	CMGCKG	1 cut(s)	1142
MspI	CCGG	4 cut(s)	12, 246, 582, 1934
MspR9I	CCNGG	2 cut(s)	13, 185
MunI	CAATTG	2 cut(s)	1476, 1905
Mva1269I	GAATGC	1 cut(s)	1591
MvaI	CCWGG	1 cut(s)	185
MvnI	CGCG	1 cut(s)	2034
MwoI	GCNNNNNNNGC	9 cut(s)	164, 199, 377, 440, 980, 986, 1481, 1640, 1886
NciI	CCSGG	1 cut(s)	13
NdeI	CATATG	1 cut(s)	1252
NdeII	GATC	5 cut(s)	420, 1166, 1518, 1695, 1956
NlaIV	GGNNCC	3 cut(s)	157, 435, 816
NmeAIII	GCCGAG	1 cut(s)	1583
NmuCI	GTSAC	3 cut(s)	15, 1201, 1659
NspI	RCATGY	2 cut(s)	1643, 1981
NspV	TTCGAA	1 cut(s)	215
PauI	GCGCGC	1 cut(s)	2032
PciSI	GCTCTTC	1 cut(s)	1196
PctI	GAATGC	1 cut(s)	1591
PfeI	GAWTC	2 cut(s)	804, 1564
PkrI	GCNGC	9 cut(s)	77, 92, 307, 546, 549, 601, 982, 1360, 1728
PmaCI	CACGTG	1 cut(s)	700
PmlI	CACGTG	1 cut(s)	700
Ppu21I	YACGTR	1 cut(s)	700
Psp124BI	GAGCTC	1 cut(s)	750
Psp1406I	AACGTT	1 cut(s)	2007
Psp6I	CCWGG	1 cut(s)	183
PspCI	CACGTG	1 cut(s)	700
PspFI	CCCAGC	2 cut(s)	474, 1947
PspGI	CCWGG	1 cut(s)	183
PspN4I	GGNNCC	3 cut(s)	157, 435, 816
PspPI	GGNCC	3 cut(s)	356, 703, 845
PsrI	GAACNNNNNNTAC	2 cut(s)	1894, 1926
PstI	CTGCAG	2 cut(s)	80, 1432
PstNI	CAGNNNCTG	1 cut(s)	510
PteI	GCGCGC	1 cut(s)	2032
PvuII	CAGCTG	1 cut(s)	1142
RseI	CAYNNNNRTG	2 cut(s)	229, 1199
SacI	GAGCTC	1 cut(s)	750
SapI	GCTCTTC	1 cut(s)	1196
SaqAI	TTAA	1 cut(s)	258
SatI	GCNGC	9 cut(s)	76, 91, 306, 545, 548, 600, 981, 1359, 1727
Sau3AI	GATC	5 cut(s)	420, 1166, 1518, 1695, 1956
Sau96I	GGNCC	3 cut(s)	356, 703, 845
ScaI	AGTACT	1 cut(s)	50
ScrFI	CCNGG	2 cut(s)	13, 185
SduI	GDGCHC	6 cut(s)	117, 482, 750, 1078, 1419, 1685
SfaNI	GCATC	3 cut(s)	1273, 1328, 2019
SfcI	CTRYAG	4 cut(s)	76, 1143, 1428, 1648
SfuI	TTCGAA	1 cut(s)	215
SinI	GGWCC	3 cut(s)	356, 703, 845
SmiMI	CAYNNNNRTG	2 cut(s)	229, 1199
SmlI	CTYRAG	3 cut(s)	1304, 2023, 2078
SmoI	CTYRAG	3 cut(s)	1304, 2023, 2078
SsiI	CCGC	2 cut(s)	202, 1264
SspI	AATATT	1 cut(s)	526
SspMI	CTAG	7 cut(s)	272, 276, 372, 707, 902, 1064, 1490
SstI	GAGCTC	1 cut(s)	750
StyD4I	CCNGG	2 cut(s)	11, 183
TaaI	ACNGT	5 cut(s)	21, 30, 451, 776, 943
TaiI	ACGT	3 cut(s)	60, 702, 2010
TaqI	TCGA	4 cut(s)	33, 215, 417, 1941
TatI	WGTACW	5 cut(s)	48, 219, 574, 1247, 1740
TfiI	GAWTC	2 cut(s)	804, 1564
Tru1I	TTAA	1 cut(s)	258
Tru9I	TTAA	1 cut(s)	258
TscAI	CASTG	9 cut(s)	117, 247, 299, 454, 946, 1083, 1206, 1437, 1887
TseFI	GTSAC	3 cut(s)	15, 1201, 1659
TseI	GCWGC	9 cut(s)	75, 90, 305, 544, 547, 599, 980, 1358, 1726
Tsp45I	GTSAC	3 cut(s)	15, 1201, 1659
TspDTI	ATGAA	3 cut(s)	1183, 1374, 2033
TspRI	CASTG	9 cut(s)	117, 247, 299, 454, 946, 1083, 1206, 1437, 1887
VpaK11BI	GGWCC	3 cut(s)	356, 703, 845
XapI	RAATTY	1 cut(s)	2067
XceI	RCATGY	2 cut(s)	1643, 1981
XmiI	GTMKAC	1 cut(s)	633
XspI	CTAG	7 cut(s)	272, 276, 372, 707, 902, 1064, 1490
ZrmI	AGTACT	1 cut(s)	50

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.