MD06G1110300.v1.1

Glutaredoxin

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Forward (+)
24956280 .. 24957455
1176 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1110300.v1.1.491

Sequence Viewer

Length: 1176 bp
ATGGGATGTGCCTCCTCGAAACGAATAGAGGCAGCAGCCGTAGATTACAAGCCGGCACCAGCCAGCTACGCCGTCTTTGATATCAACTCCGTCCAAGAGCCCTGGCTCGTATTCGACAATACAACGTCGCAGGAGCAGGAGCAGGAGCAGGAGCAGCAGCAAAGCCACGAAAAGCCCGCGCACATGCCCGCCCAAATCCTCGATAAGCTCAACTCGTTCGAAAACGAAGCGGGGGTTGCCGCCCCTTACACATGGGACGAAGTCAGCAAGGCCTTAGAGGACTTGAAGCCCAATATCAAGCCCAAACCCAAGTCCGAGCCCGATACCCAGCCCGAACAGAGCCCATCACCAGCCCAGAACGAACCGGCTAGCAGGAAGCCGCGCAAGAGCGCGTCCTTCCACACGCTCGAAGAGCTCGACGCGAGACACACGGCGAAGCCGACTCCGTTGAAAAAGAGCGAGTCGATGCGGTCCGCGTGGAAGAAACCCGTCCCCGCTGAGCCGGCCCGGTTCGAGTCACGAGCTGACACGGCGGGGACTGAGTCGACGACGACGGTCATAAAGTCGGTGAGGGATAATATGTTTATAATGAGGGACAGGATGGAGAGAGAGAAAGAGGGAAAGTTGGCGGCTTACGATAGGATGATGAAGACCAGGCGGGACCCACTGAGCGAGTACCCGGAGAAGTGCCCGCCGGGCGGGGCGGAATCTGTGGTGGTGTACACGACGTCGTTGAGGGGCGTGCGGCGGACGTTCGAGGACTGCAGTAAGGTGAAGGGGATTATGGAGGGGCACAGGATCGTGTACGACGAGCGTGACGTGGCGCTGCACGGGGAGTTTCTGGGTGAGCTGAAGGGATTGCTGGGTGGGGGGAGTAGTGGCAGTGATGGTAATAACGTGAGCGTACCGAGGGTTTTTGTGAAGGGGAGGTATATTGGGGGAGTGGATGAGATGGTGGAGTTGAATGAGTCGGGCGTATTGGGCAGGATGGTGAAGCTGGCACGTGTGGAGAGGGGGGTGGGGTGGAAAGTGTGCGAGGGGTGTGGTGGGGCCAGGTTTGTGCCGTGTATGGAGTGCGGAGGGAGCTGTAAAGTGGTGGTTGGGGAAAAGAGGGAGAGGTGCCCCAAGTGTAACGAGAATGGACTAGTGCACTGCGTGGCTTGTTGGTCATCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

392

Amino Acids

43.18

Weight (kDa)

6.69

Isoelectric Point (pI)

47.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glutaredoxin PF00462 238 - 312 2.5e-09 Glutaredoxin
GRXCR1-2_C PF23733 345 - 388 3.1e-16 GRXCR1/2, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014483)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 587
AatII GACGTC 1 cut(s) 731
AccB1I GGYRCC 2 cut(s) 55, 1119
AccI GTMKAC 1 cut(s) 545
AccII CGCG 5 cut(s) 179, 382, 392, 422, 476
AclWI GGATC 1 cut(s) 806
AcuI CTGAAG 1 cut(s) 872
AcvI CACGTG 1 cut(s) 1004
AcyI GRCGYC 1 cut(s) 728
AdeI CACNNNGTG 1 cut(s) 1156
AfaI GTAC 4 cut(s) 677, 722, 806, 906
AfiI CCNNNNNNNGG 1 cut(s) 698
AflIII ACRYGT 1 cut(s) 1003
AgsI TTSAA 3 cut(s) 286, 451, 964
AhlI ACTAGT 1 cut(s) 1144
AjiI CACGTC 1 cut(s) 820
AjnI CCWGG 3 cut(s) 101, 653, 1052
AluBI AGCT 7 cut(s) 66, 208, 415, 524, 850, 997, 1086
AluI AGCT 7 cut(s) 66, 208, 415, 524, 850, 997, 1086
Alw21I GWGCWC 2 cut(s) 417, 1152
Alw26I GTCTC 1 cut(s) 418
Alw44I GTGCAC 1 cut(s) 1148
AlwI GGATC 1 cut(s) 806
AoxI GGCC 3 cut(s) 270, 504, 1050
ApaLI GTGCAC 1 cut(s) 1148
ApeKI GCWGC 5 cut(s) 32, 35, 154, 157, 826
AspLEI GCGC 4 cut(s) 181, 384, 392, 826
AspS9I GGNCC 4 cut(s) 471, 505, 661, 1050
AsuC2I CCSGG 3 cut(s) 508, 680, 696
AsuHPI GGTGA 5 cut(s) 339, 580, 784, 857, 1003
AsuII TTCGAA 1 cut(s) 219
AsuNHI GCTAGC 1 cut(s) 368
AvaII GGWCC 2 cut(s) 471, 661
BaeGI GKGCMC 4 cut(s) 692, 795, 1124, 1152
BanI GGYRCC 2 cut(s) 55, 1119
BanII GRGCYC 4 cut(s) 102, 321, 344, 417
BauI CACGAG 1 cut(s) 519
BbrPI CACGTG 1 cut(s) 1004
BbsI GAAGAC 1 cut(s) 656
Bbv12I GWGCWC 2 cut(s) 417, 1152
BbvI GCAGC 5 cut(s) 44, 47, 166, 169, 813
BccI CCATC 5 cut(s) 352, 595, 881, 946, 982
BceAI ACGGC 5 cut(s) 23, 56, 447, 546, 1048
BciT130I CCWGG 3 cut(s) 103, 655, 1054
BcnI CCSGG 3 cut(s) 508, 680, 696
BcoDI GTCTC 1 cut(s) 418
BcuI ACTAGT 1 cut(s) 1144
BfaI CTAG 2 cut(s) 369, 1145
BfmI CTRYAG 1 cut(s) 763
BfoI RGCGCY 1 cut(s) 827
BglI GCCNNNNNGGC 1 cut(s) 696
BisI GCNGC 9 cut(s) 33, 36, 155, 158, 240, 380, 630, 746, 827
BlpI GCTNAGC 1 cut(s) 498
BlsI GCNGC 9 cut(s) 34, 37, 156, 159, 241, 381, 631, 747, 828
Bme1390I CCNGG 6 cut(s) 103, 508, 655, 680, 696, 1054
Bme18I GGWCC 2 cut(s) 471, 661
BmgBI CACGTC 1 cut(s) 820
BmgT120I GGNCC 4 cut(s) 471, 505, 661, 1050
BmiI GGNNCC 5 cut(s) 57, 662, 663, 1051, 1121
BmrFI CCNGG 6 cut(s) 103, 508, 655, 680, 696, 1054
BmsI GCATC 1 cut(s) 456
BmtI GCTAGC 1 cut(s) 372
BoxI GACNNNNGTC 1 cut(s) 554
BpiI GAAGAC 1 cut(s) 656
Bpu1102I GCTNAGC 1 cut(s) 498
Bpu14I TTCGAA 1 cut(s) 219
BpuMI CCSGG 3 cut(s) 508, 680, 696
BsaAI YACGTR 1 cut(s) 1004
BsaHI GRCGYC 1 cut(s) 728
BsaJI CCNNGG 2 cut(s) 101, 908
Bsc4I CCNNNNNNNGG 1 cut(s) 698
Bse118I RCCGGY 3 cut(s) 52, 364, 502
BseBI CCWGG 3 cut(s) 103, 655, 1054
BseDI CCNNGG 2 cut(s) 101, 908
BseGI GGATG 5 cut(s) 11, 606, 648, 952, 993
BseLI CCNNNNNNNGG 1 cut(s) 698
BseMII CTCAG 3 cut(s) 489, 531, 659
BseRI GAGGAG 1 cut(s) 4
BseSI GKGCMC 4 cut(s) 692, 795, 1124, 1152
BseXI GCAGC 5 cut(s) 44, 47, 166, 169, 813
BseYI CCCAGC 2 cut(s) 327, 862
BsgI GTGCAG 1 cut(s) 812
Bsh1236I CGCG 5 cut(s) 179, 382, 392, 422, 476
BshFI GGCC 3 cut(s) 272, 506, 1052
BshNI GGYRCC 2 cut(s) 55, 1119
BsiHKAI GWGCWC 2 cut(s) 417, 1152
BsiSI CCGG 6 cut(s) 53, 365, 503, 508, 680, 695
BslFI GGGAC 5 cut(s) 269, 476, 550, 608, 674
BslI CCNNNNNNNGG 1 cut(s) 698
BsmAI GTCTC 1 cut(s) 418
BsmFI GGGAC 5 cut(s) 269, 476, 550, 608, 674
BsnI GGCC 3 cut(s) 272, 506, 1052
Bsp119I TTCGAA 1 cut(s) 219
Bsp1286I GDGCHC 8 cut(s) 102, 321, 344, 417, 692, 795, 1124, 1152
Bsp1407I TGTACA 1 cut(s) 720
Bsp143I GATC 1 cut(s) 798
Bsp1720I GCTNAGC 1 cut(s) 498
BspANI GGCC 3 cut(s) 272, 506, 1052
BspCNI CTCAG 3 cut(s) 490, 532, 660
BspFNI CGCG 5 cut(s) 179, 382, 392, 422, 476
BspLI GGNNCC 5 cut(s) 57, 662, 663, 1051, 1121
BspMAI CTGCAG 1 cut(s) 767
BspOI GCTAGC 1 cut(s) 372
BspPI GGATC 1 cut(s) 806
BspQI GCTCTTC 1 cut(s) 405
BspT104I TTCGAA 1 cut(s) 219
BspT107I GGYRCC 2 cut(s) 55, 1119
BsrFI RCCGGY 3 cut(s) 52, 364, 502
BsrGI TGTACA 1 cut(s) 720
BssAI RCCGGY 3 cut(s) 52, 364, 502
BssECI CCNNGG 2 cut(s) 101, 908
BssMI GATC 1 cut(s) 798
BssNI GRCGYC 1 cut(s) 728
BssSI CACGAG 1 cut(s) 519
Bst2BI CACGAG 1 cut(s) 519
Bst2UI CCWGG 3 cut(s) 103, 655, 1054
Bst4CI ACNGT 1 cut(s) 556
Bst6I CTCTTC 1 cut(s) 405
BstACI GRCGYC 1 cut(s) 728
BstAUI TGTACA 1 cut(s) 720
BstBAI YACGTR 1 cut(s) 1004
BstBI TTCGAA 1 cut(s) 219
BstC8I GCNNGC 9 cut(s) 54, 64, 177, 189, 370, 504, 692, 743, 999
BstDEI CTNAG 4 cut(s) 274, 498, 540, 668
BstF5I GGATG 5 cut(s) 11, 606, 648, 952, 993
BstFNI CGCG 5 cut(s) 179, 382, 392, 422, 476
BstH2I RGCGCY 1 cut(s) 827
BstHHI GCGC 4 cut(s) 181, 384, 392, 826
BstKTI GATC 1 cut(s) 801
BstMAI GTCTC 1 cut(s) 418
BstMBI GATC 1 cut(s) 798
BstMWI GCNNNNNNNGC 9 cut(s) 68, 154, 236, 412, 503, 530, 696, 981, 1083
BstNI CCWGG 3 cut(s) 103, 655, 1054
BstNSI RCATGY 1 cut(s) 187
BstPAI GACNNNNGTC 1 cut(s) 554
BstSCI CCNGG 6 cut(s) 101, 506, 653, 678, 694, 1052
BstSFI CTRYAG 1 cut(s) 763
BstSLI GKGCMC 4 cut(s) 692, 795, 1124, 1152
BstUI CGCG 5 cut(s) 179, 382, 392, 422, 476
BstV1I GCAGC 5 cut(s) 44, 47, 166, 169, 813
BstV2I GAAGAC 1 cut(s) 656
BsuRI GGCC 3 cut(s) 272, 506, 1052
BtrI CACGTC 1 cut(s) 820
BtsCI GGATG 5 cut(s) 11, 606, 648, 952, 993
BtsI GCAGTG 2 cut(s) 889, 1150
BtsIMutI CAGTG 3 cut(s) 665, 889, 1150
Cac8I GCNNGC 9 cut(s) 54, 64, 177, 189, 370, 504, 692, 743, 999
CfoI GCGC 4 cut(s) 181, 384, 392, 826
Cfr10I RCCGGY 3 cut(s) 52, 364, 502
Cfr13I GGNCC 4 cut(s) 471, 505, 661, 1050
CpoI CGGWCCG 1 cut(s) 471
CseI GACGC 2 cut(s) 381, 428
Csp6I GTAC 4 cut(s) 676, 721, 805, 905
CspI CGGWCCG 1 cut(s) 471
CviAII CATG 2 cut(s) 184, 252
CviQI GTAC 4 cut(s) 676, 721, 805, 905
DdeI CTNAG 4 cut(s) 274, 498, 540, 668
DpnI GATC 1 cut(s) 800
DpnII GATC 1 cut(s) 798
DraIII CACNNNGTG 1 cut(s) 1156
Eam1104I CTCTTC 1 cut(s) 405
EarI CTCTTC 1 cut(s) 405
EciI GGCGGA 2 cut(s) 719, 763
Ecl136II GAGCTC 1 cut(s) 415
Eco147I AGGCCT 1 cut(s) 272
Eco24I GRGCYC 4 cut(s) 102, 321, 344, 417
Eco32I GATATC 1 cut(s) 82
Eco47I GGWCC 2 cut(s) 471, 661
Eco53kI GAGCTC 1 cut(s) 415
Eco57I CTGAAG 1 cut(s) 872
Eco72I CACGTG 1 cut(s) 1004
EcoICRI GAGCTC 1 cut(s) 415
EcoO109I RGGNCCY 1 cut(s) 661
EcoRII CCWGG 3 cut(s) 101, 653, 1052
EcoRV GATATC 1 cut(s) 82
EcoT38I GRGCYC 4 cut(s) 102, 321, 344, 417
FaeI CATG 2 cut(s) 187, 255
FaiI YATR 8 cut(s) 185, 253, 560, 581, 587, 785, 933, 1070
FaqI GGGAC 5 cut(s) 269, 476, 550, 608, 674
FatI CATG 2 cut(s) 183, 251
FauI CCCGC 8 cut(s) 184, 196, 223, 502, 526, 651, 692, 699
FblI GTMKAC 1 cut(s) 545
Fnu4HI GCNGC 9 cut(s) 33, 36, 155, 158, 240, 380, 630, 746, 827
FokI GGATG 5 cut(s) 18, 613, 655, 959, 1000
FriOI GRGCYC 4 cut(s) 102, 321, 344, 417
Fsp4HI GCNGC 9 cut(s) 33, 36, 155, 158, 240, 380, 630, 746, 827
FspBI CTAG 2 cut(s) 369, 1145
GlaI GCGC 4 cut(s) 180, 383, 391, 825
GluI GCNGC 9 cut(s) 33, 36, 155, 158, 240, 380, 630, 746, 827
GsaI CCCAGC 2 cut(s) 331, 866
HaeII RGCGCY 1 cut(s) 827
HaeIII GGCC 3 cut(s) 272, 506, 1052
HapII CCGG 6 cut(s) 53, 365, 503, 508, 680, 695
HgaI GACGC 2 cut(s) 381, 428
HhaI GCGC 4 cut(s) 181, 384, 392, 826
Hin1I GRCGYC 1 cut(s) 728
Hin1II CATG 2 cut(s) 187, 255
Hin6I GCGC 4 cut(s) 179, 382, 390, 824
HinP1I GCGC 4 cut(s) 179, 382, 390, 824
HincII GTYRAC 1 cut(s) 546
HindII GTYRAC 1 cut(s) 546
HinfI GANTC 6 cut(s) 442, 461, 515, 542, 707, 968
HpaII CCGG 6 cut(s) 53, 365, 503, 508, 680, 695
HphI GGTGA 5 cut(s) 339, 580, 784, 857, 1003
Hpy166II GTNNAC 5 cut(s) 546, 721, 723, 805, 1150
Hpy188I TCNGA 1 cut(s) 316
Hpy188III TCNNGA 1 cut(s) 519
Hpy8I GTNNAC 5 cut(s) 546, 721, 723, 805, 1150
Hpy99I CGWCG 8 cut(s) 130, 422, 550, 553, 556, 730, 733, 812
HpyAV CCTTC 4 cut(s) 406, 769, 847, 916
HpyCH4III ACNGT 1 cut(s) 556
HpyCH4IV ACGT 6 cut(s) 125, 728, 752, 819, 897, 1003
HpyCH4V TGCA 3 cut(s) 765, 829, 1150
HpyF10VI GCNNNNNNNGC 9 cut(s) 68, 154, 236, 412, 503, 530, 696, 981, 1083
HpyF3I CTNAG 4 cut(s) 274, 498, 540, 668
HpySE526I ACGT 6 cut(s) 125, 728, 752, 819, 897, 1003
Hsp92I GRCGYC 1 cut(s) 728
Hsp92II CATG 2 cut(s) 187, 255
HspAI GCGC 4 cut(s) 179, 382, 390, 824
KflI GGGWCCC 1 cut(s) 661
KroI GCCGGC 2 cut(s) 52, 502
KroNI GCCGGC 2 cut(s) 54, 504
Kzo9I GATC 1 cut(s) 798
LguI GCTCTTC 1 cut(s) 405
LmnI GCTCC 5 cut(s) 133, 139, 145, 151, 1083
Lsp1109I GCAGC 5 cut(s) 44, 47, 166, 169, 813
LweI GCATC 1 cut(s) 456
MaeI CTAG 2 cut(s) 369, 1145
MaeII ACGT 6 cut(s) 125, 728, 752, 819, 897, 1003
MaeIII GTNAC 3 cut(s) 516, 815, 1130
MalI GATC 1 cut(s) 800
MboI GATC 1 cut(s) 798
MboII GAAGA 3 cut(s) 422, 493, 661
MhlI GDGCHC 8 cut(s) 102, 321, 344, 417, 692, 795, 1124, 1152
MlyI GAGTC 5 cut(s) 436, 470, 524, 551, 977
MroNI GCCGGC 2 cut(s) 52, 502
MspA1I CMGCKG 1 cut(s) 497
MspI CCGG 6 cut(s) 53, 365, 503, 508, 680, 695
MspR9I CCNGG 6 cut(s) 103, 508, 655, 680, 696, 1054
MvaI CCWGG 3 cut(s) 103, 655, 1054
MvnI CGCG 5 cut(s) 179, 382, 392, 422, 476
MwoI GCNNNNNNNGC 9 cut(s) 68, 154, 236, 412, 503, 530, 696, 981, 1083
NaeI GCCGGC 2 cut(s) 54, 504
NciI CCSGG 3 cut(s) 508, 680, 696
NdeII GATC 1 cut(s) 798
NgoMIV GCCGGC 2 cut(s) 52, 502
NheI GCTAGC 1 cut(s) 368
NlaIII CATG 2 cut(s) 187, 255
NlaIV GGNNCC 5 cut(s) 57, 662, 663, 1051, 1121
NmuCI GTSAC 2 cut(s) 516, 815
NspI RCATGY 1 cut(s) 187
NspV TTCGAA 1 cut(s) 219
PceI AGGCCT 1 cut(s) 272
PciSI GCTCTTC 1 cut(s) 405
PcsI WCGNNNNNNNCGW 4 cut(s) 414, 437, 807, 816
PdiI GCCGGC 2 cut(s) 54, 504
PfeI GAWTC 1 cut(s) 707
PflFI GACNNNGTC 2 cut(s) 260, 541
PkrI GCNGC 9 cut(s) 34, 37, 156, 159, 241, 381, 631, 747, 828
PleI GAGTC 5 cut(s) 436, 469, 523, 550, 976
PmaCI CACGTG 1 cut(s) 1004
PmlI CACGTG 1 cut(s) 1004
PpsI GAGTC 5 cut(s) 436, 469, 523, 550, 976
Ppu21I YACGTR 1 cut(s) 1004
PpuMI RGGWCCY 1 cut(s) 661
PshAI GACNNNNGTC 1 cut(s) 554
PsiI TTATAA 1 cut(s) 587
Psp124BI GAGCTC 1 cut(s) 417
Psp5II RGGWCCY 1 cut(s) 661
Psp6I CCWGG 3 cut(s) 101, 653, 1052
PspCI CACGTG 1 cut(s) 1004
PspFI CCCAGC 2 cut(s) 327, 862
PspGI CCWGG 3 cut(s) 101, 653, 1052
PspN4I GGNNCC 5 cut(s) 57, 662, 663, 1051, 1121
PspPI GGNCC 4 cut(s) 471, 505, 661, 1050
PspPPI RGGWCCY 1 cut(s) 661
PstI CTGCAG 1 cut(s) 767
PsyI GACNNNGTC 2 cut(s) 260, 541
RsaI GTAC 4 cut(s) 677, 722, 806, 906
RsaNI GTAC 4 cut(s) 676, 721, 805, 905
Rsr2I CGGWCCG 1 cut(s) 471
RsrII CGGWCCG 1 cut(s) 471
SacI GAGCTC 1 cut(s) 417
SalI GTCGAC 1 cut(s) 544
SapI GCTCTTC 1 cut(s) 405
SatI GCNGC 9 cut(s) 33, 36, 155, 158, 240, 380, 630, 746, 827
Sau3AI GATC 1 cut(s) 798
Sau96I GGNCC 4 cut(s) 471, 505, 661, 1050
SchI GAGTC 5 cut(s) 436, 470, 524, 551, 977
ScrFI CCNGG 6 cut(s) 103, 508, 655, 680, 696, 1054
SduI GDGCHC 8 cut(s) 102, 321, 344, 417, 692, 795, 1124, 1152
SfaNI GCATC 1 cut(s) 456
SfcI CTRYAG 1 cut(s) 763
SfuI TTCGAA 1 cut(s) 219
SinI GGWCC 2 cut(s) 471, 661
SpeI ACTAGT 1 cut(s) 1144
SseBI AGGCCT 1 cut(s) 272
SspMI CTAG 2 cut(s) 369, 1145
SstI GAGCTC 1 cut(s) 417
StuI AGGCCT 1 cut(s) 272
StyD4I CCNGG 6 cut(s) 101, 506, 653, 678, 694, 1052
TaaI ACNGT 1 cut(s) 556
TaiI ACGT 6 cut(s) 128, 731, 755, 822, 900, 1006
TatI WGTACW 1 cut(s) 720
TauI GCSGC 4 cut(s) 242, 382, 632, 748
TfiI GAWTC 1 cut(s) 707
TscAI CASTG 3 cut(s) 672, 889, 1157
TseFI GTSAC 2 cut(s) 516, 815
TseI GCWGC 5 cut(s) 32, 35, 154, 157, 826
Tsp45I GTSAC 2 cut(s) 516, 815
TspDTI ATGAA 1 cut(s) 662
TspGWI ACGGA 2 cut(s) 79, 435
TspRI CASTG 3 cut(s) 672, 889, 1157
Tth111I GACNNNGTC 2 cut(s) 260, 541
VneI GTGCAC 1 cut(s) 1148
VpaK11BI GGWCC 2 cut(s) 471, 661
XceI RCATGY 1 cut(s) 187
XmiI GTMKAC 1 cut(s) 545
XspI CTAG 2 cut(s) 369, 1145
ZraI GACGTC 1 cut(s) 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.