Prupe.5G123100_v2.0.a1

Glutaredoxin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0014483
Physical Location & Seq
Forward (+)
12181058 .. 12183633
2576 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G123100.1

Sequence Viewer

Length: 1146 bp
ATGGGCTGCGCTTCCTCGAAAAGAGTGGAGGCTGCCGTGGACTACAAGCCGGCGCCGGCGAGCTACGCGGTCTTCGACATCAACGCCATCCAAGAGCCGTGGCTCGTATTCGACAATACGACGTTGCAGGAGCAGCAGCAGAGCCACGAAAAGCCCGCGCATGTGCCGGCCCAAATCCTCGACAAGCTCAAATCGTTAGAAACCGAAGCGGAAGCAGCCCCTCACACGTGGGACGAGGTCAGCAAGGCCCTAGAGGACCTGAAGCCCAAGACCGACCCGAAGTCCAAACCCGAGCCAAGCCCAACTCCTTCCCCGACCCAGGACGAACAGACCAGTAGTAGGAAGCCCCGTAAGAGCCTGTCCTTCCACACGCTCGATGAGCTCGACAAGAAGCTCGCTCCGAAACCGGCCGACTTGAGAAAGAGCGAGTCGATGCGGTCCCTGTGGAAGCTGAACACCGAGTCGACCCGGTCCGAGTCACGAGTTGACTTGGAGGCGACTCAGGCGACTCAGTCGGCGGCGGGTTACATCAAGCCGGTGAAGGAGAACATATTCATAATGAGGGACAGGCTGGAGAGAGAGAAGGAAGGCAAGCTCGCGGTCTACGACAGGCTGATGAAGAGCAGGCGGGACCCACTGAGCGAGTACCCGGAGAGGTGCCCGCCCGGCGGCTCCGACTCTGTGGTAGTCTACACGACGTCGTTGCGAGGGGTGCGGCGGACGTTCGAGGACTGCCAGAAGGTGAAGGGGGTGCTGGAGGGCCATCGGGTGGTGTACGACGAGCGTGACGTGGCGCTGCACGGCGAGTTTCTGGGTGAGCTGAGGGGATTGCTGGGTGAGGAGAGCAATAACTCCGACGGCGGCGTGGGTGTGCCGAGGGTTTTCGTGAAGGGGAGGTATCTGGGTGGGGCGGAGGAGGTGGTGGAGCTGAACGAGTCCGGGGTGTTTGGGAGGATGGTGAAGTTGGCAGGCGTGGAGAGAGGGGTGGGGTGGCGAGCGTGCGAGGGGTGCGGTGGGGCCCGGTTCGTGCCGTGCATGGAGTGTGGCGGGAGTTGTAAGGTGGTGGTTGGGGATAAGAGGGAGAGGTGCCCCAAGTGTAATGAGAATGGGCTGGTGCAGTGTGTGGCTTGTTGGTCTTTAACGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

382

Amino Acids

42.18

Weight (kDa)

6.38

Isoelectric Point (pI)

47.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014483)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G64500
fragaria_vesca FvH4_5g04960
malus_domestica MD06G1110300.v1.1
prunus_persica Prupe.5G123100_v2.0.a1
pyrus_communis pycom06g10360
rosa_chinensis RchiOBHm_Chr7g0194111
rosa_laevigata RLG00000004217
rosa_multiflora Rmu_sc0003468.1_g000003 Rmu_sc0007117.1_g000001 Rmu_sc0009433.1_g000004
rosa_roxburghii Rroxscaffold_3G00261550
rosa_rugosa Rorug07G0013800
rosa_samantha Rh7AG140900 Rh7BG141600 Rh7CG145000 Rh7DG142400
rosa_wichuraiana Rw7G012050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 701
AccB1I GGYRCC 3 cut(s) 52, 657, 1086
AccB7I CCANNNNNTGG 1 cut(s) 769
AccI GTMKAC 3 cut(s) 464, 603, 690
AccII CGCG 3 cut(s) 68, 158, 599
AcoI YGGCCR 1 cut(s) 408
AcuI CTGAAG 1 cut(s) 281
AcvI CACGTG 1 cut(s) 228
AcyI GRCGYC 2 cut(s) 53, 698
AfaI GTAC 2 cut(s) 647, 776
AfiI CCNNNNNNNGG 4 cut(s) 319, 339, 668, 769
AflIII ACRYGT 1 cut(s) 225
AhdI GACNNNNNGTC 1 cut(s) 280
AjiI CACGTC 1 cut(s) 790
AjnI CCWGG 1 cut(s) 318
AluBI AGCT 8 cut(s) 63, 187, 382, 394, 451, 595, 820, 928
AluI AGCT 8 cut(s) 63, 187, 382, 394, 451, 595, 820, 928
Alw21I GWGCWC 1 cut(s) 384
Ama87I CYCGRG 1 cut(s) 290
AoxI GGCC 5 cut(s) 168, 246, 408, 760, 1017
ApaI GGGCCC 1 cut(s) 1021
ApeKI GCWGC 6 cut(s) 6, 32, 133, 136, 215, 796
Asp700I GAANNNNTTC 1 cut(s) 551
AspLEI GCGC 4 cut(s) 11, 55, 160, 796
AspS9I GGNCC 9 cut(s) 169, 247, 256, 438, 471, 631, 760, 1017, 1018
AsuC2I CCSGG 5 cut(s) 469, 650, 666, 940, 1021
AsuHPI GGTGA 5 cut(s) 550, 754, 827, 848, 970
AvaI CYCGRG 1 cut(s) 290
AvaII GGWCC 4 cut(s) 256, 438, 471, 631
BaeGI GKGCMC 3 cut(s) 662, 1021, 1091
BanI GGYRCC 3 cut(s) 52, 657, 1086
BanII GRGCYC 2 cut(s) 384, 1021
BauI CACGAG 1 cut(s) 480
BbrPI CACGTG 1 cut(s) 228
BbsI GAAGAC 1 cut(s) 64
Bbv12I GWGCWC 1 cut(s) 384
BbvCI CCTCAGC 1 cut(s) 821
BbvI GCAGC 5 cut(s) 19, 145, 148, 227, 783
BccI CCATC 3 cut(s) 95, 771, 949
BceAI ACGGC 5 cut(s) 20, 82, 817, 874, 1015
BcgI CGANNNNNNTGC 2 cut(s) 685, 719
BciT130I CCWGG 1 cut(s) 320
BcnI CCSGG 5 cut(s) 469, 650, 666, 940, 1021
BfaI CTAG 1 cut(s) 251
BfoI RGCGCY 2 cut(s) 56, 797
BglI GCCNNNNNGGC 1 cut(s) 666
Bme1390I CCNGG 6 cut(s) 320, 469, 650, 666, 940, 1021
Bme18I GGWCC 4 cut(s) 256, 438, 471, 631
BmeRI GACNNNNNGTC 1 cut(s) 280
BmeT110I CYCGRG 1 cut(s) 290
BmgBI CACGTC 1 cut(s) 790
BmgT120I GGNCC 9 cut(s) 169, 247, 256, 438, 471, 631, 760, 1017, 1018
BmiI GGNNCC 9 cut(s) 54, 440, 632, 633, 659, 673, 1018, 1019, 1088
BmrFI CCNGG 6 cut(s) 320, 469, 650, 666, 940, 1021
BmsI GCATC 1 cut(s) 423
BpiI GAAGAC 1 cut(s) 64
BpmI CTGGAG 2 cut(s) 593, 776
Bpu10I CCTNAGC 1 cut(s) 821
BpuEI CTTGAG 1 cut(s) 436
BpuMI CCSGG 5 cut(s) 469, 650, 666, 940, 1021
BsaAI YACGTR 1 cut(s) 228
BsaHI GRCGYC 2 cut(s) 53, 698
BsaJI CCNNGG 5 cut(s) 36, 98, 318, 875, 939
Bsc4I CCNNNNNNNGG 4 cut(s) 319, 339, 668, 769
Bse118I RCCGGY 5 cut(s) 49, 55, 166, 406, 535
Bse1I ACTGG 1 cut(s) 333
BseBI CCWGG 1 cut(s) 320
BseDI CCNNGG 5 cut(s) 36, 98, 318, 875, 939
BseGI GGATG 2 cut(s) 87, 960
BseLI CCNNNNNNNGG 4 cut(s) 319, 339, 668, 769
BseMII CTCAG 4 cut(s) 515, 524, 629, 812
BseNI ACTGG 1 cut(s) 333
BseRI GAGGAG 2 cut(s) 854, 929
BseSI GKGCMC 3 cut(s) 662, 1021, 1091
BseX3I CGGCCG 1 cut(s) 408
BseXI GCAGC 5 cut(s) 19, 145, 148, 227, 783
BseYI CCCAGC 1 cut(s) 832
BsgI GTGCAG 2 cut(s) 782, 1136
Bsh1236I CGCG 3 cut(s) 68, 158, 599
Bsh1285I CGRYCG 1 cut(s) 411
BshFI GGCC 5 cut(s) 170, 248, 410, 762, 1019
BshNI GGYRCC 3 cut(s) 52, 657, 1086
BsiEI CGRYCG 1 cut(s) 411
BsiHKAI GWGCWC 1 cut(s) 384
BsiHKCI CYCGRG 1 cut(s) 290
BslFI GGGAC 4 cut(s) 245, 424, 578, 644
BslI CCNNNNNNNGG 4 cut(s) 319, 339, 668, 769
BsmFI GGGAC 4 cut(s) 245, 424, 578, 644
BsnI GGCC 5 cut(s) 170, 248, 410, 762, 1019
BsoBI CYCGRG 1 cut(s) 290
Bsp120I GGGCCC 1 cut(s) 1017
Bsp1286I GDGCHC 4 cut(s) 384, 662, 1021, 1091
BspANI GGCC 5 cut(s) 170, 248, 410, 762, 1019
BspCNI CTCAG 4 cut(s) 514, 523, 630, 813
BspFNI CGCG 3 cut(s) 68, 158, 599
BspLI GGNNCC 9 cut(s) 54, 440, 632, 633, 659, 673, 1018, 1019, 1088
BspQI GCTCTTC 1 cut(s) 614
BspT107I GGYRCC 3 cut(s) 52, 657, 1086
BsrFI RCCGGY 5 cut(s) 49, 55, 166, 406, 535
BsrI ACTGG 1 cut(s) 333
BssAI RCCGGY 5 cut(s) 49, 55, 166, 406, 535
BssECI CCNNGG 5 cut(s) 36, 98, 318, 875, 939
BssNI GRCGYC 2 cut(s) 53, 698
BssSI CACGAG 1 cut(s) 480
Bst2BI CACGAG 1 cut(s) 480
Bst2UI CCWGG 1 cut(s) 320
Bst6I CTCTTC 1 cut(s) 614
BstACI GRCGYC 2 cut(s) 53, 698
BstBAI YACGTR 1 cut(s) 228
BstDEI CTNAG 4 cut(s) 501, 510, 638, 821
BstDSI CCRYGG 2 cut(s) 36, 98
BstF5I GGATG 2 cut(s) 87, 960
BstFNI CGCG 3 cut(s) 68, 158, 599
BstH2I RGCGCY 2 cut(s) 56, 797
BstHHI GCGC 4 cut(s) 11, 55, 160, 796
BstMCI CGRYCG 1 cut(s) 411
BstMWI GCNNNNNNNGC 8 cut(s) 65, 133, 215, 379, 503, 666, 712, 1008
BstNI CCWGG 1 cut(s) 320
BstNSI RCATGY 1 cut(s) 164
BstSCI CCNGG 6 cut(s) 318, 467, 648, 664, 938, 1019
BstSLI GKGCMC 3 cut(s) 662, 1021, 1091
BstUI CGCG 3 cut(s) 68, 158, 599
BstV1I GCAGC 5 cut(s) 19, 145, 148, 227, 783
BstV2I GAAGAC 1 cut(s) 64
BstZI CGGCCG 1 cut(s) 408
BsuRI GGCC 5 cut(s) 170, 248, 410, 762, 1019
BtgI CCRYGG 2 cut(s) 36, 98
BtrI CACGTC 1 cut(s) 790
BtsCI GGATG 2 cut(s) 87, 960
BtsI GCAGTG 1 cut(s) 1124
BtsIMutI CAGTG 2 cut(s) 635, 1124
CfoI GCGC 4 cut(s) 11, 55, 160, 796
Cfr10I RCCGGY 5 cut(s) 49, 55, 166, 406, 535
Cfr13I GGNCC 9 cut(s) 169, 247, 256, 438, 471, 631, 760, 1017, 1018
CpoI CGGWCCG 1 cut(s) 471
Csp6I GTAC 2 cut(s) 646, 775
CspCI CAANNNNNGTGG 2 cut(s) 80, 115
CspI CGGWCCG 1 cut(s) 471
CviAII CATG 2 cut(s) 161, 1036
CviQI GTAC 2 cut(s) 646, 775
DdeI CTNAG 4 cut(s) 501, 510, 638, 821
DinI GGCGCC 1 cut(s) 54
DriI GACNNNNNGTC 1 cut(s) 280
EaeI YGGCCR 1 cut(s) 408
EagI CGGCCG 1 cut(s) 408
Eam1104I CTCTTC 1 cut(s) 614
Eam1105I GACNNNNNGTC 1 cut(s) 280
EarI CTCTTC 1 cut(s) 614
EciI GGCGGA 2 cut(s) 733, 926
Ecl136II GAGCTC 1 cut(s) 382
EclXI CGGCCG 1 cut(s) 408
Eco24I GRGCYC 2 cut(s) 384, 1021
Eco47I GGWCC 4 cut(s) 256, 438, 471, 631
Eco52I CGGCCG 1 cut(s) 408
Eco53kI GAGCTC 1 cut(s) 382
Eco57I CTGAAG 1 cut(s) 281
Eco72I CACGTG 1 cut(s) 228
Eco88I CYCGRG 1 cut(s) 290
EcoICRI GAGCTC 1 cut(s) 382
EcoO109I RGGNCCY 4 cut(s) 247, 256, 631, 1017
EcoRII CCWGG 1 cut(s) 318
EcoT38I GRGCYC 2 cut(s) 384, 1021
EgeI GGCGCC 1 cut(s) 54
EheI GGCGCC 1 cut(s) 54
FaeI CATG 2 cut(s) 164, 1039
FaiI YATR 4 cut(s) 162, 551, 557, 1037
FaqI GGGAC 4 cut(s) 245, 424, 578, 644
FatI CATG 2 cut(s) 160, 1035
FauI CCCGC 5 cut(s) 163, 514, 621, 669, 1040
FblI GTMKAC 3 cut(s) 464, 603, 690
FokI GGATG 2 cut(s) 74, 967
FriOI GRGCYC 2 cut(s) 384, 1021
FspBI CTAG 1 cut(s) 251
GlaI GCGC 4 cut(s) 10, 54, 159, 795
GsaI CCCAGC 1 cut(s) 836
GsuI CTGGAG 2 cut(s) 593, 776
HaeII RGCGCY 2 cut(s) 56, 797
HaeIII GGCC 5 cut(s) 170, 248, 410, 762, 1019
HhaI GCGC 4 cut(s) 11, 55, 160, 796
Hin1I GRCGYC 2 cut(s) 53, 698
Hin1II CATG 2 cut(s) 164, 1039
Hin6I GCGC 4 cut(s) 9, 53, 158, 794
HinP1I GCGC 4 cut(s) 9, 53, 158, 794
HincII GTYRAC 2 cut(s) 465, 487
HindII GTYRAC 2 cut(s) 465, 487
HinfI GANTC 7 cut(s) 428, 461, 476, 499, 508, 677, 935
HphI GGTGA 5 cut(s) 550, 754, 827, 848, 970
Hpy166II GTNNAC 6 cut(s) 40, 465, 487, 604, 691, 775
Hpy188I TCNGA 4 cut(s) 402, 475, 676, 856
Hpy188III TCNNGA 2 cut(s) 480, 886
Hpy8I GTNNAC 6 cut(s) 40, 465, 487, 604, 691, 775
Hpy99I CGWCG 5 cut(s) 124, 700, 703, 782, 860
HpyAV CCTTC 8 cut(s) 318, 373, 535, 577, 581, 733, 739, 883
HpyCH4IV ACGT 6 cut(s) 122, 227, 698, 722, 789, 1142
HpyCH4V TGCA 4 cut(s) 127, 799, 1035, 1117
HpyF10VI GCNNNNNNNGC 8 cut(s) 65, 133, 215, 379, 503, 666, 712, 1008
HpyF3I CTNAG 4 cut(s) 501, 510, 638, 821
HpySE526I ACGT 6 cut(s) 122, 227, 698, 722, 789, 1142
Hsp92I GRCGYC 2 cut(s) 53, 698
Hsp92II CATG 2 cut(s) 164, 1039
HspAI GCGC 4 cut(s) 9, 53, 158, 794
KasI GGCGCC 1 cut(s) 52
KflI GGGWCCC 1 cut(s) 631
KroI GCCGGC 3 cut(s) 49, 55, 166
KroNI GCCGGC 3 cut(s) 51, 57, 168
LguI GCTCTTC 1 cut(s) 614
LmnI GCTCC 4 cut(s) 130, 403, 677, 925
Lsp1109I GCAGC 5 cut(s) 19, 145, 148, 227, 783
LweI GCATC 1 cut(s) 423
MaeI CTAG 1 cut(s) 251
MaeII ACGT 6 cut(s) 122, 227, 698, 722, 789, 1142
MaeIII GTNAC 3 cut(s) 477, 524, 785
MboII GAAGA 2 cut(s) 64, 631
MhlI GDGCHC 4 cut(s) 384, 662, 1021, 1091
Mly113I GGCGCC 1 cut(s) 53
MlyI GAGTC 7 cut(s) 437, 470, 485, 493, 502, 671, 944
MmeI TCCRAC 2 cut(s) 699, 879
MreI CGCCGGCG 1 cut(s) 55
MroNI GCCGGC 3 cut(s) 49, 55, 166
MroXI GAANNNNTTC 1 cut(s) 551
MseI TTAA 1 cut(s) 1139
MspR9I CCNGG 6 cut(s) 320, 469, 650, 666, 940, 1021
MvaI CCWGG 1 cut(s) 320
MvnI CGCG 3 cut(s) 68, 158, 599
MwoI GCNNNNNNNGC 8 cut(s) 65, 133, 215, 379, 503, 666, 712, 1008
NaeI GCCGGC 3 cut(s) 51, 57, 168
NarI GGCGCC 1 cut(s) 53
NciI CCSGG 5 cut(s) 469, 650, 666, 940, 1021
NgoMIV GCCGGC 3 cut(s) 49, 55, 166
NlaIII CATG 2 cut(s) 164, 1039
NlaIV GGNNCC 9 cut(s) 54, 440, 632, 633, 659, 673, 1018, 1019, 1088
NmeAIII GCCGAG 1 cut(s) 900
NmuCI GTSAC 2 cut(s) 477, 785
NspI RCATGY 1 cut(s) 164
PciSI GCTCTTC 1 cut(s) 614
PcsI WCGNNNNNNNCGW 4 cut(s) 72, 381, 603, 786
PdiI GCCGGC 3 cut(s) 51, 57, 168
PdmI GAANNNNTTC 1 cut(s) 551
PflFI GACNNNGTC 3 cut(s) 236, 469, 511
PflMI CCANNNNNTGG 1 cut(s) 769
PleI GAGTC 7 cut(s) 436, 469, 484, 493, 502, 671, 943
PluTI GGCGCC 1 cut(s) 56
PmaCI CACGTG 1 cut(s) 228
PmlI CACGTG 1 cut(s) 228
PpsI GAGTC 7 cut(s) 436, 469, 484, 493, 502, 671, 943
Ppu21I YACGTR 1 cut(s) 228
PpuMI RGGWCCY 2 cut(s) 256, 631
Psp124BI GAGCTC 1 cut(s) 384
Psp5II RGGWCCY 2 cut(s) 256, 631
Psp6I CCWGG 1 cut(s) 318
PspCI CACGTG 1 cut(s) 228
PspFI CCCAGC 1 cut(s) 832
PspGI CCWGG 1 cut(s) 318
PspN4I GGNNCC 9 cut(s) 54, 440, 632, 633, 659, 673, 1018, 1019, 1088
PspOMI GGGCCC 1 cut(s) 1017
PspPI GGNCC 9 cut(s) 169, 247, 256, 438, 471, 631, 760, 1017, 1018
PspPPI RGGWCCY 2 cut(s) 256, 631
PsyI GACNNNGTC 3 cut(s) 236, 469, 511
RsaI GTAC 2 cut(s) 647, 776
RsaNI GTAC 2 cut(s) 646, 775
Rsr2I CGGWCCG 1 cut(s) 471
RsrII CGGWCCG 1 cut(s) 471
SacI GAGCTC 1 cut(s) 384
SalI GTCGAC 1 cut(s) 463
SapI GCTCTTC 1 cut(s) 614
SaqAI TTAA 1 cut(s) 1139
Sau96I GGNCC 9 cut(s) 169, 247, 256, 438, 471, 631, 760, 1017, 1018
SchI GAGTC 7 cut(s) 437, 470, 485, 493, 502, 671, 944
ScrFI CCNGG 6 cut(s) 320, 469, 650, 666, 940, 1021
SduI GDGCHC 4 cut(s) 384, 662, 1021, 1091
SfaNI GCATC 1 cut(s) 423
SfoI GGCGCC 1 cut(s) 54
SgrAI CRCCGGYG 1 cut(s) 55
SinI GGWCC 4 cut(s) 256, 438, 471, 631
SmlI CTYRAG 1 cut(s) 415
SmoI CTYRAG 1 cut(s) 415
SspDI GGCGCC 1 cut(s) 52
SspMI CTAG 1 cut(s) 251
SstI GAGCTC 1 cut(s) 384
StyD4I CCNGG 6 cut(s) 318, 467, 648, 664, 938, 1019
TaiI ACGT 6 cut(s) 125, 230, 701, 725, 792, 1145
TaqI TCGA 9 cut(s) 17, 75, 111, 180, 375, 384, 431, 464, 726
TaqII GACCGA 1 cut(s) 287
TauI GCSGC 4 cut(s) 521, 672, 718, 864
Tru1I TTAA 1 cut(s) 1139
Tru9I TTAA 1 cut(s) 1139
TscAI CASTG 2 cut(s) 642, 1124
TseFI GTSAC 2 cut(s) 477, 785
TseI GCWGC 6 cut(s) 6, 32, 133, 136, 215, 796
Tsp45I GTSAC 2 cut(s) 477, 785
TspDTI ATGAA 2 cut(s) 544, 632
TspRI CASTG 2 cut(s) 642, 1124
Tth111I GACNNNGTC 3 cut(s) 236, 469, 511
Van91I CCANNNNNTGG 1 cut(s) 769
VpaK11BI GGWCC 4 cut(s) 256, 438, 471, 631
XceI RCATGY 1 cut(s) 164
XmiI GTMKAC 3 cut(s) 464, 603, 690
XmnI GAANNNNTTC 1 cut(s) 551
XspI CTAG 1 cut(s) 251
ZraI GACGTC 1 cut(s) 699
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.