Rorug07G0013800

Glutaredoxin

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
1083057 .. 1085015
1959 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0013800.1

Sequence Viewer

Length: 588 bp
ATGGAGGATCTGTTGCTTGTGTGCAGTCGGATGGGATTGAGTATGAAACAAGGCGATGAGGGGGAGATCCTGGATATGATCATTCCTTACATTCGTGGATGCCCTATGTATCGCGAGGGAATCACAGTTTTCATGACAAGGGTGAGAGAACATATCGATAGGTGTAGCACCCTCGACGATTTGGAGACGGTGAAGAACGCCCTCAACAGTAGCATTTTTCTAGAGGAATATGAGGACTGGAAAAAAGAGGAGCAGACCATCACCAGTAGGTTCTCCCTTCCTAGTTGTCTTATGTTGACCTCTTTGACACTGGAGGAGGATATGGCTGATGCTAAGGACCAAGTTAATCAACTGTTAAAGAGGAATATGTTGCCGACTAAAGAAGAAGGTATTGCTACCCCCATGAACCAAATAAAACAAGAAGATAAAAGGGTATGTGGAGATATAATGGAAATTGAAGAAATGGAGACTTTGACCCCCTTGAACATGCCAGAAGAAGCAAAAGAAAGTACGGGCAATGCTTATTCCAGTATCAAAGAAAGTTTGAAAAGGGATGGAGCTAATAAGAGAAAGCTTGCCCAGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

195

Amino Acids

22.34

Weight (kDa)

4.7

Isoelectric Point (pI)

51.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014483)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 114
AclWI GGATC 2 cut(s) 15, 61
AfaI GTAC 1 cut(s) 511
AgsI TTSAA 3 cut(s) 458, 484, 547
AjnI CCWGG 1 cut(s) 69
AluBI AGCT 2 cut(s) 560, 574
AluI AGCT 2 cut(s) 560, 574
Alw26I GTCTC 2 cut(s) 179, 461
AlwI GGATC 2 cut(s) 15, 61
AspS9I GGNCC 1 cut(s) 337
AsuHPI GGTGA 3 cut(s) 154, 202, 253
AvaII GGWCC 1 cut(s) 337
BccI CCATC 3 cut(s) 25, 266, 548
BciT130I CCWGG 1 cut(s) 71
BclI TGATCA 1 cut(s) 78
BcoDI GTCTC 2 cut(s) 179, 461
BfaI CTAG 3 cut(s) 221, 282, 586
BglII AGATCT 1 cut(s) 582
Bme1390I CCNGG 1 cut(s) 71
Bme18I GGWCC 1 cut(s) 337
BmgT120I GGNCC 1 cut(s) 337
BmrFI CCNGG 1 cut(s) 71
BmsI GCATC 2 cut(s) 89, 319
BpmI CTGGAG 1 cut(s) 332
Bpu10I CCTNAGC 1 cut(s) 333
Bsa29I ATCGAT 1 cut(s) 156
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bse1I ACTGG 4 cut(s) 242, 264, 315, 528
Bse3DI GCAATG 1 cut(s) 523
BseBI CCWGG 1 cut(s) 71
BseCI ATCGAT 1 cut(s) 156
BseGI GGATG 3 cut(s) 36, 104, 559
BseMI GCAATG 1 cut(s) 523
BseNI ACTGG 4 cut(s) 242, 264, 315, 528
BseRI GAGGAG 2 cut(s) 263, 329
BsgI GTGCAG 1 cut(s) 43
Bsh1236I CGCG 1 cut(s) 114
BshVI ATCGAT 1 cut(s) 156
BsmAI GTCTC 2 cut(s) 179, 461
BsmBI CGTCTC 1 cut(s) 179
Bsp143I GATC 4 cut(s) 7, 66, 78, 582
Bsp68I TCGCGA 1 cut(s) 114
BspDI ATCGAT 1 cut(s) 156
BspFNI CGCG 1 cut(s) 114
BspHI TCATGA 1 cut(s) 132
BspPI GGATC 2 cut(s) 15, 61
BsrDI GCAATG 1 cut(s) 523
BsrI ACTGG 4 cut(s) 242, 264, 315, 528
BssMI GATC 4 cut(s) 7, 66, 78, 582
Bst2UI CCWGG 1 cut(s) 71
Bst4CI ACNGT 4 cut(s) 127, 190, 209, 354
BstC8I GCNNGC 1 cut(s) 576
BstDEI CTNAG 1 cut(s) 333
BstF5I GGATG 3 cut(s) 36, 104, 559
BstFNI CGCG 1 cut(s) 114
BstKTI GATC 4 cut(s) 10, 69, 81, 585
BstMAI GTCTC 2 cut(s) 179, 461
BstMBI GATC 4 cut(s) 7, 66, 78, 582
BstNI CCWGG 1 cut(s) 71
BstNSI RCATGY 1 cut(s) 490
BstSCI CCNGG 1 cut(s) 69
BstUI CGCG 1 cut(s) 114
BstX2I RGATCY 3 cut(s) 7, 66, 582
BstYI RGATCY 3 cut(s) 7, 66, 582
Bsu15I ATCGAT 1 cut(s) 156
BsuTUI ATCGAT 1 cut(s) 156
BtgZI GCGATG 1 cut(s) 69
BtsCI GGATG 3 cut(s) 36, 104, 559
BtsIMutI CAGTG 1 cut(s) 308
BtuMI TCGCGA 1 cut(s) 114
Cac8I GCNNGC 1 cut(s) 576
CciI TCATGA 1 cut(s) 132
Cfr13I GGNCC 1 cut(s) 337
ClaI ATCGAT 1 cut(s) 156
Csp6I GTAC 1 cut(s) 510
CviAII CATG 3 cut(s) 133, 403, 487
CviJI RGCY 3 cut(s) 326, 560, 574
CviKI_1 RGCY 3 cut(s) 326, 560, 574
CviQI GTAC 1 cut(s) 510
DdeI CTNAG 1 cut(s) 333
DpnI GATC 4 cut(s) 9, 68, 80, 584
DpnII GATC 4 cut(s) 7, 66, 78, 582
Eco47I GGWCC 1 cut(s) 337
EcoRII CCWGG 1 cut(s) 69
Esp3I CGTCTC 1 cut(s) 179
FaeI CATG 3 cut(s) 136, 406, 490
FatI CATG 3 cut(s) 132, 402, 486
FbaI TGATCA 1 cut(s) 78
FokI GGATG 3 cut(s) 43, 111, 566
FspBI CTAG 3 cut(s) 221, 282, 586
GsuI CTGGAG 1 cut(s) 332
Hin1II CATG 3 cut(s) 136, 406, 490
HincII GTYRAC 1 cut(s) 297
HindII GTYRAC 1 cut(s) 297
HindIII AAGCTT 1 cut(s) 572
HinfI GANTC 1 cut(s) 120
HphI GGTGA 3 cut(s) 154, 202, 253
Hpy166II GTNNAC 1 cut(s) 297
Hpy188I TCNGA 1 cut(s) 30
Hpy188III TCNNGA 3 cut(s) 113, 133, 221
Hpy8I GTNNAC 1 cut(s) 297
Hpy99I CGWCG 1 cut(s) 179
HpyAV CCTTC 2 cut(s) 287, 380
HpyCH4III ACNGT 4 cut(s) 127, 190, 209, 354
HpyCH4V TGCA 1 cut(s) 24
HpyF3I CTNAG 1 cut(s) 333
Hsp92II CATG 3 cut(s) 136, 406, 490
Ksp22I TGATCA 1 cut(s) 78
Kzo9I GATC 4 cut(s) 7, 66, 78, 582
LmnI GCTCC 2 cut(s) 250, 557
LpnPI CCDG 7 cut(s) 56, 83, 223, 277, 296, 504, 541
LweI GCATC 2 cut(s) 89, 319
MaeI CTAG 3 cut(s) 221, 282, 586
MalI GATC 4 cut(s) 9, 68, 80, 584
MboI GATC 4 cut(s) 7, 66, 78, 582
MboII GAAGA 5 cut(s) 205, 395, 434, 470, 506
MflI RGATCY 3 cut(s) 7, 66, 582
MluCI AATT 1 cut(s) 453
MmeI TCCRAC 1 cut(s) 8
MseI TTAA 2 cut(s) 345, 356
MspR9I CCNGG 1 cut(s) 71
MvaI CCWGG 1 cut(s) 71
MvnI CGCG 1 cut(s) 114
NdeII GATC 4 cut(s) 7, 66, 78, 582
NlaIII CATG 3 cut(s) 136, 406, 490
NruI TCGCGA 1 cut(s) 114
NspI RCATGY 1 cut(s) 490
PagI TCATGA 1 cut(s) 132
PfeI GAWTC 1 cut(s) 120
PfoI TCCNGGA 1 cut(s) 69
Psp6I CCWGG 1 cut(s) 69
PspGI CCWGG 1 cut(s) 69
PspPI GGNCC 1 cut(s) 337
PsuI RGATCY 3 cut(s) 7, 66, 582
RruI TCGCGA 1 cut(s) 114
RsaI GTAC 1 cut(s) 511
RsaNI GTAC 1 cut(s) 510
SaqAI TTAA 2 cut(s) 345, 356
Sau3AI GATC 4 cut(s) 7, 66, 78, 582
Sau96I GGNCC 1 cut(s) 337
ScrFI CCNGG 1 cut(s) 71
SetI ASST 6 cut(s) 164, 272, 302, 391, 562, 576
SfaNI GCATC 2 cut(s) 89, 319
SinI GGWCC 1 cut(s) 337
Sse9I AATT 1 cut(s) 453
SspMI CTAG 3 cut(s) 221, 282, 586
StyD4I CCNGG 1 cut(s) 69
TaaI ACNGT 4 cut(s) 127, 190, 209, 354
TaqI TCGA 2 cut(s) 156, 174
TasI AATT 1 cut(s) 453
TfiI GAWTC 1 cut(s) 120
Tru1I TTAA 2 cut(s) 345, 356
Tru9I TTAA 2 cut(s) 345, 356
TscAI CASTG 1 cut(s) 315
TspDTI ATGAA 3 cut(s) 59, 121, 419
TspRI CASTG 1 cut(s) 315
VpaK11BI GGWCC 1 cut(s) 337
XbaI TCTAGA 1 cut(s) 220
XceI RCATGY 1 cut(s) 490
XspI CTAG 3 cut(s) 221, 282, 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.