Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0012117

Physical Location & Seq

Genomic Coordinates Reverse (-)

32788694 .. 32791033

Gene Structure 2340 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1192400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1347 bp

ATGGGAGCAGCGGGAGAATGGCTGGAGAAGGCGTTGGTGGATCTTTGCGGGAAGATGGAAACGGGGGGTTTGGATAAGGATATGATATCGGGTTTGGTCTCCTACTGTGAGCTCGCCGATCCTCAAGACGCCAAAGAATACCTCGACAACATAATCGGGGAGGAGGTTGGCAAATTTGTGATTGAGGAATATTTGCAGAAACGGGGTCGCTCAGATCTTTGCAGCAGCACCCCGGTTGTTTCAACCTCAAGTTTGCATGCCTATGTTAAACCACCTTCAAATGAAGGTTCTGCAAGTGGAACCAAGAAACCGTTAAATACACCAAAAGTGGCTAAAGTCCCCAGTGATCAAGCAGCTTCCAGCAATCAGGTGAAGCAGCTTTCAAGTTCAAATAATACAAACCAAGGTAATTCTAAGAAGAAGAAAGCTGGGAAAGTCGTTTCACTTGCTGAGGCTGCCAAAGGATCAATTGTATTCAACCAGGGGAAGCCATGCTCATGCCAAGCCCGTCGCCACAGTCTTGTGAGCAATTGTTTATCTTGCGGGAAGATAGTCTGTGAGCAAGAGGGCGAGGGGCCTTGCAATTTTTGTGGAGCTCTTGTGCTGAAGGAAGGCAGCACGTATGCTGGTTTGGAGGAAAGTTTTGCTCCCACATCAGATGCTGAAGCAGTAGCAGAAGCTTATGCAAAGAGACTCGTTGAGTATGACCGAGACTCTGCAGCACGTACTACAGTTATTGATGACCAGAGTGACTACTATGAAATTGAGGGGAATAGTTGGTTGTCAAAGGAGGAAAAGGAACTTCTGACAAAGAAGCAGGAGGAGATTGCAGAAGCTGAGCGGATCAAACGAAGTAAAGTAGTTGTATCTTTTGACTTGGTTGGTCGCAAGGTAATTATAACTTCACTGATTGTGTGCTTGTATGAGTACGCTTTAAACCGCATTTTCCTAAACGTGCATTTTGCCCATCCCATATTTTGTGTTCCGCAGGTCCTTGTAAATGAAGATGAAGCTTCTGAAGTAGAATCAGAAAGCAGAATATTGAGGCCCCAAGATGAAAAGGAAGTAAACCGCATCAAACCAAACCCTTCTCTTAAAGTACAACCAGTCTTTGTGGATCCGGGCCCTAGTAAGAAGCCTATTCAAGGTAGAAAGGCAAACAAGACCCTAACAAAAGGCTTGTGCTTGGGGATAACCGGGAGGGTGCAGCATGTCAGCGATGAATTGAAACATTTTATGGTGGACAATCAATTGGAAACTGCTTCAAATGGGATGTTTTCGCAAGGGACACCTGTAAGTGGAGGTACGCTTGATGATGATGGAGAATGTTTTCTGGATTTCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002020 GO:0003674 GO:0003712 GO:0003713 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006355 GO:0006810 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016604 GO:0016922 GO:0019219 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0030331 GO:0030518 GO:0030520 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031594 GO:0031974 GO:0031981 GO:0032870 GO:0032991 GO:0033993 GO:0035035 GO:0035257 GO:0035258 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043401 GO:0044389 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045202 GO:0045595 GO:0045661 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048545 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051252 GO:0051254 GO:0051427 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0080090 GO:0099053 GO:0140110 GO:1901998 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2HC5

Protein Analysis

449

Amino Acids

48.81

Weight (kDa)

5.45

Isoelectric Point (pI)

36.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C2HC5	PF06221	163 - 203	1.7e-12	Putative zinc finger motif, C2HC5-type
TRIP4_3rd	PF23134	248 - 299	1.4e-19	TRIP4, third domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47610
fragaria_vesca	FvH4_5g15050 FvH4_5g15050
malus_domestica	MD06G1192400.v1.1 MD14G1199100.v1.1
prunus_persica	Prupe.5G192200_v2.0.a1
pyrus_communis	pycom06g17050 pycom14g16520
rosa_chinensis	RchiOBHm_Chr7g0181151
rosa_laevigata	RLG00000005209
rosa_multiflora	Rmu_sc0020165.1_g000001 Rmu_sc0034479.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272230
rosa_rugosa	Rorug06G0438700
rosa_samantha	Rh7AG040800 Rh7BG040200 Rh7CG042200 Rh7DG040600
rosa_wichuraiana	Rw7G003370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	899
Acc36I	ACCTGC	1 cut(s)	979
AccBSI	CCGCTC	1 cut(s)	841
AciI	CCGC	7 cut(s)	11, 48, 543, 841, 940, 986, 1072
AclWI	GGATC	6 cut(s)	48, 113, 472, 851, 1112, 1125
AcsI	RAATTY	1 cut(s)	173
AcuI	CTGAAG	3 cut(s)	626, 684, 1038
AcyI	GRCGYC	1 cut(s)	129
AfaI	GTAC	4 cut(s)	727, 929, 1101, 1306
AfiI	CCNNNNNNNGG	2 cut(s)	1145, 1298
AgsI	TTSAA	8 cut(s)	243, 279, 384, 390, 478, 1145, 1228, 1266
AjnI	CCWGG	1 cut(s)	480
AluBI	AGCT	8 cut(s)	112, 356, 379, 428, 596, 680, 836, 1013
AluI	AGCT	8 cut(s)	112, 356, 379, 428, 596, 680, 836, 1013
Alw21I	GWGCWC	2 cut(s)	114, 598
Alw26I	GTCTC	3 cut(s)	103, 685, 705
AlwI	GGATC	6 cut(s)	48, 113, 472, 851, 1112, 1125
AlwNI	CAGNNNCTG	2 cut(s)	662, 836
AoxI	GGCC	3 cut(s)	575, 1046, 1123
ApaI	GGGCCC	1 cut(s)	1127
ApeKI	GCWGC	9 cut(s)	8, 222, 225, 353, 376, 455, 615, 719, 1207
ApoI	RAATTY	1 cut(s)	173
Asp700I	GAANNNNTTC	1 cut(s)	1329
AspS9I	GGNCC	5 cut(s)	575, 991, 1047, 1123, 1124
AsuC2I	CCSGG	3 cut(s)	233, 1122, 1198
AsuHPI	GGTGA	1 cut(s)	382
AvaII	GGWCC	1 cut(s)	991
BaeGI	GKGCMC	1 cut(s)	1127
BamHI	GGATCC	1 cut(s)	1117
BanII	GRGCYC	3 cut(s)	114, 598, 1127
Bbv12I	GWGCWC	2 cut(s)	114, 598
BbvCI	CCTCAGC	1 cut(s)	450
BbvI	GCAGC	9 cut(s)	20, 234, 237, 365, 388, 442, 627, 731, 1219
BccI	CCATC	3 cut(s)	49, 975, 1313
BciT130I	CCWGG	1 cut(s)	482
BclI	TGATCA	1 cut(s)	346
BcnI	CCSGG	3 cut(s)	233, 1122, 1198
BcoDI	GTCTC	3 cut(s)	103, 685, 705
BfaI	CTAG	1 cut(s)	1128
BfmI	CTRYAG	2 cut(s)	717, 729
BfuAI	ACCTGC	1 cut(s)	979
BglII	AGATCT	1 cut(s)	214
BisI	GCNGC	9 cut(s)	9, 223, 226, 354, 377, 456, 616, 720, 1208
BlpI	GCTNAGC	1 cut(s)	837
BlsI	GCNGC	9 cut(s)	10, 224, 227, 355, 378, 457, 617, 721, 1209
Bme1390I	CCNGG	4 cut(s)	233, 482, 1122, 1198
Bme18I	GGWCC	1 cut(s)	991
BmgT120I	GGNCC	5 cut(s)	575, 991, 1047, 1123, 1124
BmiI	GGNNCC	5 cut(s)	301, 576, 1049, 1119, 1125
BmrFI	CCNGG	4 cut(s)	233, 482, 1122, 1198
BmrI	ACTGGG	1 cut(s)	336
BmsI	GCATC	2 cut(s)	649, 1083
BmuI	ACTGGG	1 cut(s)	336
BpmI	CTGGAG	1 cut(s)	44
Bpu10I	CCTNAGC	1 cut(s)	450
Bpu1102I	GCTNAGC	1 cut(s)	837
BpuEI	CTTGAG	2 cut(s)	108, 232
BpuMI	CCSGG	3 cut(s)	233, 1122, 1198
BsaAI	YACGTR	2 cut(s)	621, 725
BsaHI	GRCGYC	1 cut(s)	129
BsaI	GGTCTC	1 cut(s)	103
BsaJI	CCNNGG	3 cut(s)	231, 403, 481
BsaXI	ACNNNNNCTCC	4 cut(s)	17, 47, 585, 615
Bsc4I	CCNNNNNNNGG	2 cut(s)	1145, 1298
Bse1I	ACTGG	2 cut(s)	342, 1106
BseBI	CCWGG	1 cut(s)	482
BseDI	CCNNGG	3 cut(s)	231, 403, 481
BseGI	GGATG	2 cut(s)	967, 1278
BseLI	CCNNNNNNNGG	2 cut(s)	1145, 1298
BseMII	CTCAG	3 cut(s)	225, 441, 828
BseNI	ACTGG	2 cut(s)	342, 1106
BseRI	GAGGAG	2 cut(s)	176, 836
BseSI	GKGCMC	1 cut(s)	1127
BseXI	GCAGC	9 cut(s)	20, 234, 237, 365, 388, 442, 627, 731, 1219
BseYI	CCCAGC	1 cut(s)	428
BsgI	GTGCAG	1 cut(s)	1226
BshFI	GGCC	3 cut(s)	577, 1048, 1125
BsiHKAI	GWGCWC	2 cut(s)	114, 598
BsiSI	CCGG	3 cut(s)	233, 1121, 1197
BslFI	GGGAC	2 cut(s)	323, 1300
BslI	CCNNNNNNNGG	2 cut(s)	1145, 1298
BsmAI	GTCTC	3 cut(s)	103, 685, 705
BsmFI	GGGAC	2 cut(s)	323, 1300
BsnI	GGCC	3 cut(s)	577, 1048, 1125
Bso31I	GGTCTC	1 cut(s)	103
Bsp120I	GGGCCC	1 cut(s)	1123
Bsp1286I	GDGCHC	3 cut(s)	114, 598, 1127
Bsp143I	GATC	7 cut(s)	40, 118, 214, 346, 464, 843, 1117
Bsp1720I	GCTNAGC	1 cut(s)	837
BspACI	CCGC	7 cut(s)	11, 48, 543, 841, 940, 986, 1072
BspANI	GGCC	3 cut(s)	577, 1048, 1125
BspCNI	CTCAG	3 cut(s)	224, 442, 829
BspLI	GGNNCC	5 cut(s)	301, 576, 1049, 1119, 1125
BspMAI	CTGCAG	1 cut(s)	721
BspMI	ACCTGC	1 cut(s)	979
BspPI	GGATC	6 cut(s)	48, 113, 472, 851, 1112, 1125
BspTNI	GGTCTC	1 cut(s)	103
BsrBI	CCGCTC	1 cut(s)	841
BsrI	ACTGG	2 cut(s)	342, 1106
BssECI	CCNNGG	3 cut(s)	231, 403, 481
BssMI	GATC	7 cut(s)	40, 118, 214, 346, 464, 843, 1117
BssNI	GRCGYC	1 cut(s)	129
BssT1I	CCWWGG	1 cut(s)	403
Bst2UI	CCWGG	1 cut(s)	482
Bst4CI	ACNGT	4 cut(s)	107, 312, 518, 733
BstACI	GRCGYC	1 cut(s)	129
BstBAI	YACGTR	2 cut(s)	621, 725
BstC8I	GCNNGC	2 cut(s)	114, 258
BstDEI	CTNAG	4 cut(s)	211, 414, 450, 837
BstENI	CCTNNNNNAGG	1 cut(s)	1143
BstF5I	GGATG	2 cut(s)	967, 1278
BstKTI	GATC	7 cut(s)	43, 121, 217, 349, 467, 846, 1120
BstMAI	GTCTC	3 cut(s)	103, 685, 705
BstMBI	GATC	7 cut(s)	40, 118, 214, 346, 464, 843, 1117
BstMWI	GCNNNNNNNGC	1 cut(s)	455
BstNI	CCWGG	1 cut(s)	482
BstNSI	RCATGY	2 cut(s)	260, 1214
BstSCI	CCNGG	4 cut(s)	231, 480, 1120, 1196
BstSFI	CTRYAG	2 cut(s)	717, 729
BstSLI	GKGCMC	1 cut(s)	1127
BstV1I	GCAGC	9 cut(s)	20, 234, 237, 365, 388, 442, 627, 731, 1219
BstX2I	RGATCY	3 cut(s)	40, 214, 1117
BstYI	RGATCY	3 cut(s)	40, 214, 1117
BsuRI	GGCC	3 cut(s)	577, 1048, 1125
BtgZI	GCGATG	1 cut(s)	1233
BtsCI	GGATG	2 cut(s)	967, 1278
BtsIMutI	CAGTG	2 cut(s)	349, 905
BveI	ACCTGC	1 cut(s)	979
Cac8I	GCNNGC	2 cut(s)	114, 258
CaiI	CAGNNNCTG	2 cut(s)	662, 836
Cfr13I	GGNCC	5 cut(s)	575, 991, 1047, 1123, 1124
CseI	GACGC	1 cut(s)	137
Csp6I	GTAC	4 cut(s)	726, 928, 1100, 1305
CspCI	CAANNNNNGTGG	2 cut(s)	571, 606
CviAII	CATG	4 cut(s)	257, 492, 498, 1211
CviQI	GTAC	4 cut(s)	726, 928, 1100, 1305
DdeI	CTNAG	4 cut(s)	211, 414, 450, 837
DpnI	GATC	7 cut(s)	42, 120, 216, 348, 466, 845, 1119
DpnII	GATC	7 cut(s)	40, 118, 214, 346, 464, 843, 1117
DraI	TTTAAA	1 cut(s)	936
Ecl136II	GAGCTC	2 cut(s)	112, 596
Eco130I	CCWWGG	1 cut(s)	403
Eco24I	GRGCYC	3 cut(s)	114, 598, 1127
Eco31I	GGTCTC	1 cut(s)	103
Eco32I	GATATC	1 cut(s)	87
Eco47I	GGWCC	1 cut(s)	991
Eco53kI	GAGCTC	2 cut(s)	112, 596
Eco57I	CTGAAG	3 cut(s)	626, 684, 1038
EcoICRI	GAGCTC	2 cut(s)	112, 596
EcoNI	CCTNNNNNAGG	1 cut(s)	1143
EcoO109I	RGGNCCY	4 cut(s)	575, 991, 1047, 1124
EcoRII	CCWGG	1 cut(s)	480
EcoRV	GATATC	1 cut(s)	87
EcoT14I	CCWWGG	1 cut(s)	403
EcoT38I	GRGCYC	3 cut(s)	114, 598, 1127
ErhI	CCWWGG	1 cut(s)	403
FaeI	CATG	4 cut(s)	260, 495, 501, 1214
FaqI	GGGAC	2 cut(s)	323, 1300
FatI	CATG	4 cut(s)	256, 491, 497, 1210
FauI	CCCGC	3 cut(s)	4, 41, 536
FbaI	TGATCA	1 cut(s)	346
Fnu4HI	GCNGC	9 cut(s)	9, 223, 226, 354, 377, 456, 616, 720, 1208
FokI	GGATG	2 cut(s)	954, 1285
FriOI	GRGCYC	3 cut(s)	114, 598, 1127
Fsp4HI	GCNGC	9 cut(s)	9, 223, 226, 354, 377, 456, 616, 720, 1208
FspBI	CTAG	1 cut(s)	1128
GluI	GCNGC	9 cut(s)	9, 223, 226, 354, 377, 456, 616, 720, 1208
GsaI	CCCAGC	1 cut(s)	432
GsuI	CTGGAG	1 cut(s)	44
HaeIII	GGCC	3 cut(s)	577, 1048, 1125
HapII	CCGG	3 cut(s)	233, 1121, 1197
HgaI	GACGC	1 cut(s)	137
Hin1I	GRCGYC	1 cut(s)	129
Hin1II	CATG	4 cut(s)	260, 495, 501, 1214
HindIII	AAGCTT	2 cut(s)	678, 1011
HinfI	GANTC	3 cut(s)	693, 713, 1025
HpaII	CCGG	3 cut(s)	233, 1121, 1197
HphI	GGTGA	1 cut(s)	382
Hpy166II	GTNNAC	2 cut(s)	1069, 1243
Hpy188I	TCNGA	5 cut(s)	214, 658, 807, 1018, 1030
Hpy188III	TCNNGA	2 cut(s)	125, 1334
Hpy8I	GTNNAC	2 cut(s)	1069, 1243
Hpy99I	CGWCG	1 cut(s)	513
HpyAV	CCTTC	6 cut(s)	22, 278, 285, 601, 605, 1098
HpyCH4III	ACNGT	4 cut(s)	107, 312, 518, 733
HpyCH4IV	ACGT	3 cut(s)	620, 724, 954
HpyF10VI	GCNNNNNNNGC	1 cut(s)	455
HpyF3I	CTNAG	4 cut(s)	211, 414, 450, 837
HpySE526I	ACGT	3 cut(s)	620, 724, 954
Hsp92I	GRCGYC	1 cut(s)	129
Hsp92II	CATG	4 cut(s)	260, 495, 501, 1214
Ksp22I	TGATCA	1 cut(s)	346
Kzo9I	GATC	7 cut(s)	40, 118, 214, 346, 464, 843, 1117
LmnI	GCTCC	3 cut(s)	5, 593, 652
Lsp1109I	GCAGC	9 cut(s)	20, 234, 237, 365, 388, 442, 627, 731, 1219
LweI	GCATC	2 cut(s)	649, 1083
MaeI	CTAG	1 cut(s)	1128
MaeII	ACGT	3 cut(s)	620, 724, 954
MaeIII	GTNAC	1 cut(s)	749
MalI	GATC	7 cut(s)	42, 120, 216, 348, 466, 845, 1119
MbiI	CCGCTC	1 cut(s)	841
MboI	GATC	7 cut(s)	40, 118, 214, 346, 464, 843, 1117
MboII	GAAGA	5 cut(s)	64, 430, 433, 559, 1016
MfeI	CAATTG	3 cut(s)	468, 529, 1250
MflI	RGATCY	3 cut(s)	40, 214, 1117
MhlI	GDGCHC	3 cut(s)	114, 598, 1127
MluCI	AATT	9 cut(s)	173, 409, 468, 529, 583, 762, 894, 1223, 1250
MlyI	GAGTC	2 cut(s)	687, 707
MroXI	GAANNNNTTC	1 cut(s)	1329
MseI	TTAA	4 cut(s)	267, 314, 935, 1095
MslI	CAYNNNNRTG	2 cut(s)	261, 496
MspA1I	CMGCKG	1 cut(s)	11
MspI	CCGG	3 cut(s)	233, 1121, 1197
MspR9I	CCNGG	4 cut(s)	233, 482, 1122, 1198
MunI	CAATTG	3 cut(s)	468, 529, 1250
MvaI	CCWGG	1 cut(s)	482
MwoI	GCNNNNNNNGC	1 cut(s)	455
NciI	CCSGG	3 cut(s)	233, 1122, 1198
NdeII	GATC	7 cut(s)	40, 118, 214, 346, 464, 843, 1117
NlaIII	CATG	4 cut(s)	260, 495, 501, 1214
NlaIV	GGNNCC	5 cut(s)	301, 576, 1049, 1119, 1125
NmuCI	GTSAC	1 cut(s)	749
NspI	RCATGY	2 cut(s)	260, 1214
PaeI	GCATGC	1 cut(s)	260
PdmI	GAANNNNTTC	1 cut(s)	1329
PfeI	GAWTC	1 cut(s)	1025
PkrI	GCNGC	9 cut(s)	10, 224, 227, 355, 378, 457, 617, 721, 1209
PleI	GAGTC	2 cut(s)	687, 707
PpsI	GAGTC	2 cut(s)	687, 707
Ppu21I	YACGTR	2 cut(s)	621, 725
PpuMI	RGGWCCY	1 cut(s)	991
PsiI	TTATAA	1 cut(s)	899
Psp124BI	GAGCTC	2 cut(s)	114, 598
Psp5II	RGGWCCY	1 cut(s)	991
Psp6I	CCWGG	1 cut(s)	480
PspFI	CCCAGC	1 cut(s)	428
PspGI	CCWGG	1 cut(s)	480
PspN4I	GGNNCC	5 cut(s)	301, 576, 1049, 1119, 1125
PspOMI	GGGCCC	1 cut(s)	1123
PspPI	GGNCC	5 cut(s)	575, 991, 1047, 1123, 1124
PspPPI	RGGWCCY	1 cut(s)	991
PstI	CTGCAG	1 cut(s)	721
PstNI	CAGNNNCTG	2 cut(s)	662, 836
PsuI	RGATCY	3 cut(s)	40, 214, 1117
RsaI	GTAC	4 cut(s)	727, 929, 1101, 1306
RsaNI	GTAC	4 cut(s)	726, 928, 1100, 1305
RseI	CAYNNNNRTG	2 cut(s)	261, 496
SacI	GAGCTC	2 cut(s)	114, 598
SaqAI	TTAA	4 cut(s)	267, 314, 935, 1095
SatI	GCNGC	9 cut(s)	9, 223, 226, 354, 377, 456, 616, 720, 1208
Sau3AI	GATC	7 cut(s)	40, 118, 214, 346, 464, 843, 1117
Sau96I	GGNCC	5 cut(s)	575, 991, 1047, 1123, 1124
SchI	GAGTC	2 cut(s)	687, 707
ScrFI	CCNGG	4 cut(s)	233, 482, 1122, 1198
SduI	GDGCHC	3 cut(s)	114, 598, 1127
SfaNI	GCATC	2 cut(s)	649, 1083
SfcI	CTRYAG	2 cut(s)	717, 729
SinI	GGWCC	1 cut(s)	991
SmiMI	CAYNNNNRTG	2 cut(s)	261, 496
SmlI	CTYRAG	2 cut(s)	123, 247
SmoI	CTYRAG	2 cut(s)	123, 247
SphI	GCATGC	1 cut(s)	260
Sse9I	AATT	9 cut(s)	173, 409, 468, 529, 583, 762, 894, 1223, 1250
SsiI	CCGC	7 cut(s)	11, 48, 543, 841, 940, 986, 1072
SspI	AATATT	2 cut(s)	191, 1041
SspMI	CTAG	1 cut(s)	1128
SstI	GAGCTC	2 cut(s)	114, 598
StyD4I	CCNGG	4 cut(s)	231, 480, 1120, 1196
StyI	CCWWGG	1 cut(s)	403
TaaI	ACNGT	4 cut(s)	107, 312, 518, 733
TaiI	ACGT	3 cut(s)	623, 727, 957
TaqI	TCGA	1 cut(s)	144
TaqII	GACCGA	1 cut(s)	723
TasI	AATT	9 cut(s)	173, 409, 468, 529, 583, 762, 894, 1223, 1250
TatI	WGTACW	1 cut(s)	1099
TfiI	GAWTC	1 cut(s)	1025
Tru1I	TTAA	4 cut(s)	267, 314, 935, 1095
Tru9I	TTAA	4 cut(s)	267, 314, 935, 1095
TscAI	CASTG	2 cut(s)	349, 912
TseFI	GTSAC	1 cut(s)	749
TseI	GCWGC	9 cut(s)	8, 222, 225, 353, 376, 455, 615, 719, 1207
Tsp45I	GTSAC	1 cut(s)	749
TspDTI	ATGAA	6 cut(s)	297, 774, 1017, 1023, 1071, 1236
TspRI	CASTG	2 cut(s)	349, 912
VpaK11BI	GGWCC	1 cut(s)	991
XagI	CCTNNNNNAGG	1 cut(s)	1143
XapI	RAATTY	1 cut(s)	173
XceI	RCATGY	2 cut(s)	260, 1214
XmnI	GAANNNNTTC	1 cut(s)	1329
XspI	CTAG	1 cut(s)	1128

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.