Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012117

Physical Location & Seq

Genomic Coordinates Reverse (-)

2799139 .. 2801326

Gene Structure 2188 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ16158

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1287 bp

ATGGGTCAGTCGGGTCAGTGGCTAGAGAAGGCGTTGGTGGATCTATGCCAGAAGATGGAATCGGTTTTGGGCTTGGATCGGGATATGATTTCGGGTCTAGTCTCCTACTGTGAGCTAGCTGATCCCAGAGACGCTAAAGAATACCTTGATTTTAACATAATAGGGCAGGAGGTGGGGAAATCTGTGATTGAGGAGTATCTACAGAAAAGAGGTCGTTCAGATCTTTGCAGCAGCACCCCGGATGTTCCAGCCTCGAGTTTACATGCATATGTTAAGCCACCATCGAATGAGTTTTCTGTAGGGGGAACCAAGAAACAACTGAAAACGCCAAAAGTGGCTAAAGTACCTAGTCATCAGGAAGCTTCTAGCTCTCAGGGAAAGCCTGTTCCGGCTCAGGCCAGTGAGTCAAGGACCACAAATAATGCAAACCAAAGTAATTCTAAGAAGAAGAAGGCTGGAAAAGTTGTTTCACTTGCGGAGGCTGCTAAAGGATCAATTGTATTCCAGCAGGGGAAGCCATGCACGTGCCAAGCGCGTCGCCACCGGCTTGTGAGCAATTGTTTATCATGTGGGAAGATAGTGTGTGAACAAGAGGGAGAGGGACCTTGCAATTTTTGTGGAGCTCTTGTGCTGAGGGAAGGGAGCACTTATGCTGGTCTGGATGAGAGTTTCACTCCTGTGGTGTCAGATGCTGAGGCAGCAGCTGAAGCTTATGCAAAGAGACTCGTTGAGTATGATCGAGACTCTGCAGCCCGTACAACAGTGATTGATGACCAAAGTGACTACTTTGAAATTGAGGGGAACAGCTGGTTATCAAAGGAGGAAAAGGAACTTCTAAAAGAGAAGCAGGAGCAAATTGAAGAAGCTGAGCGGGCCAAACGAAATAGAGTAGTTGTGACTTTTGATTTGTTTGGGCGCAAGGTACTTTTGAATGAAGATGAAGTTTCTGAACTGGAATCAGAAAGCTTAACATTGAAGCCACTAGATGAAAGAGAAGTGAACCGTATTAAACCGAATCCTAGTCTTAAAGTGCAACCACTCTTTGTGGATCCAGGCTCCAGAAAGAAGCCTGTTGTGAAAGGTAGGAAGGAAAACAAGAGCCCAACCAAAGGCTTGTGCTTAGAGATAACTGGGAGGGTGCAGCATGTCAACAATGATATGAAAGATCTTGTGGCTCACGATCAGTTGGAGACAACCTCAAATGAAAATTTTTCTCAAGGGCCTTCTATAAGTGGAGTTCTGCCTGATGACGATGATGGAGGAAAATGTTCTTTAGACTACCGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002020 GO:0003674 GO:0003712 GO:0003713 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006355 GO:0006810 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016604 GO:0016922 GO:0019219 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0030331 GO:0030518 GO:0030520 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031594 GO:0031974 GO:0031981 GO:0032870 GO:0032991 GO:0033993 GO:0035035 GO:0035257 GO:0035258 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043401 GO:0044389 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045202 GO:0045595 GO:0045661 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0048545 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051252 GO:0051254 GO:0051427 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0080090 GO:0099053 GO:0140110 GO:1901998 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C2HC5

Protein Analysis

428

Amino Acids

47.08

Weight (kDa)

5.59

Isoelectric Point (pI)

42.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C2HC5	PF06221	172 - 212	1.4e-12	Putative zinc finger motif, C2HC5-type
TRIP4_3rd	PF23134	258 - 309	2.1e-20	TRIP4, third domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47610
fragaria_vesca	FvH4_5g15050 FvH4_5g15050
malus_domestica	MD06G1192400.v1.1 MD14G1199100.v1.1
prunus_persica	Prupe.5G192200_v2.0.a1
pyrus_communis	pycom06g17050 pycom14g16520
rosa_chinensis	RchiOBHm_Chr7g0181151
rosa_laevigata	RLG00000005209
rosa_multiflora	Rmu_sc0020165.1_g000001 Rmu_sc0034479.1_g000001
rosa_roxburghii	Rroxscaffold_3G00272230
rosa_rugosa	Rorug06G0438700
rosa_samantha	Rh7AG040800 Rh7BG040200 Rh7CG042200 Rh7DG040600
rosa_wichuraiana	Rw7G003370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	55
AccBSI	CCGCTC	1 cut(s)	871
AccII	CGCG	1 cut(s)	535
AciI	CCGC	3 cut(s)	476, 871, 1282
AclWI	GGATC	6 cut(s)	48, 84, 116, 499, 1043, 1056
AcsI	RAATTY	1 cut(s)	1207
AcuI	CTGAAG	1 cut(s)	726
AcvI	CACGTG	1 cut(s)	525
AfaI	GTAC	3 cut(s)	345, 757, 924
AfiI	CCNNNNNNNGG	2 cut(s)	55, 1109
AgsI	TTSAA	4 cut(s)	791, 860, 931, 976
AjnI	CCWGG	1 cut(s)	1051
AleI	CACNNNNGTG	1 cut(s)	677
AloI	GAACNNNNNNTCC	2 cut(s)	369, 401
Alw21I	GWGCWC	2 cut(s)	625, 647
Alw26I	GTCTC	5 cut(s)	106, 123, 715, 735, 1184
AlwI	GGATC	6 cut(s)	48, 84, 116, 499, 1043, 1056
AlwNI	CAGNNNCTG	2 cut(s)	692, 704
Ama87I	CYCGRG	1 cut(s)	253
AoxI	GGCC	3 cut(s)	396, 873, 1220
ApeKI	GCWGC	7 cut(s)	228, 231, 482, 698, 701, 749, 1141
ApoI	RAATTY	1 cut(s)	1207
ArsI	GACNNNNNNTTYG	2 cut(s)	889, 921
Asp700I	GAANNNNTTC	1 cut(s)	1267
AspLEI	GCGC	2 cut(s)	535, 918
AspS9I	GGNCC	4 cut(s)	411, 602, 873, 1220
AsuC2I	CCSGG	1 cut(s)	239
AsuNHI	GCTAGC	1 cut(s)	115
AvaI	CYCGRG	1 cut(s)	253
AvaII	GGWCC	2 cut(s)	411, 602
BamHI	GGATCC	1 cut(s)	1048
BanII	GRGCYC	2 cut(s)	625, 1103
BbrPI	CACGTG	1 cut(s)	525
Bbv12I	GWGCWC	2 cut(s)	625, 647
BbvCI	CCTCAGC	2 cut(s)	632, 693
BbvI	GCAGC	7 cut(s)	240, 243, 469, 710, 713, 761, 1153
BccI	CCATC	3 cut(s)	49, 289, 1250
BciT130I	CCWGG	1 cut(s)	1053
BcnI	CCSGG	1 cut(s)	239
BcoDI	GTCTC	5 cut(s)	106, 123, 715, 735, 1184
BfaI	CTAG	7 cut(s)	23, 98, 116, 348, 366, 983, 1020
BfmI	CTRYAG	3 cut(s)	200, 297, 747
BglII	AGATCT	2 cut(s)	220, 1165
BisI	GCNGC	7 cut(s)	229, 232, 483, 699, 702, 750, 1142
BlpI	GCTNAGC	1 cut(s)	867
BlsI	GCNGC	7 cut(s)	230, 233, 484, 700, 703, 751, 1143
Bme1390I	CCNGG	2 cut(s)	239, 1053
Bme18I	GGWCC	2 cut(s)	411, 602
BmeT110I	CYCGRG	1 cut(s)	253
BmgT120I	GGNCC	4 cut(s)	411, 602, 873, 1220
BmiI	GGNNCC	4 cut(s)	307, 603, 1050, 1057
BmrFI	CCNGG	2 cut(s)	239, 1053
BmrI	ACTGGG	1 cut(s)	1140
BmsI	GCATC	1 cut(s)	679
BmtI	GCTAGC	1 cut(s)	119
BmuI	ACTGGG	1 cut(s)	1140
BplI	GAGNNNNNCTC	4 cut(s)	658, 690, 1181, 1213
BpmI	CTGGAG	1 cut(s)	1042
Bpu10I	CCTNAGC	3 cut(s)	393, 632, 693
Bpu1102I	GCTNAGC	1 cut(s)	867
BpuEI	CTTGAG	1 cut(s)	1200
BpuMI	CCSGG	1 cut(s)	239
BsaAI	YACGTR	1 cut(s)	525
BsaJI	CCNNGG	1 cut(s)	237
BsaXI	ACNNNNNCTCC	2 cut(s)	612, 642
Bsc4I	CCNNNNNNNGG	2 cut(s)	55, 1109
Bse118I	RCCGGY	1 cut(s)	543
Bse1I	ACTGG	3 cut(s)	399, 957, 1135
BseBI	CCWGG	1 cut(s)	1053
BseDI	CCNNGG	1 cut(s)	237
BseGI	GGATG	2 cut(s)	247, 667
BseLI	CCNNNNNNNGG	2 cut(s)	55, 1109
BseMII	CTCAG	5 cut(s)	386, 407, 623, 684, 858
BseNI	ACTGG	3 cut(s)	399, 957, 1135
BseRI	GAGGAG	1 cut(s)	206
BseXI	GCAGC	7 cut(s)	240, 243, 469, 710, 713, 761, 1153
BsgI	GTGCAG	1 cut(s)	1160
Bsh1236I	CGCG	1 cut(s)	535
BshFI	GGCC	3 cut(s)	398, 875, 1222
BsiHKAI	GWGCWC	2 cut(s)	625, 647
BsiHKCI	CYCGRG	1 cut(s)	253
BsiSI	CCGG	3 cut(s)	239, 389, 544
BslFI	GGGAC	1 cut(s)	615
BslI	CCNNNNNNNGG	2 cut(s)	55, 1109
BsmAI	GTCTC	5 cut(s)	106, 123, 715, 735, 1184
BsmBI	CGTCTC	1 cut(s)	123
BsmFI	GGGAC	1 cut(s)	615
BsnI	GGCC	3 cut(s)	398, 875, 1222
BsoBI	CYCGRG	1 cut(s)	253
Bsp1286I	GDGCHC	3 cut(s)	625, 647, 1103
Bsp143I	GATC	9 cut(s)	40, 76, 121, 220, 491, 736, 1048, 1165, 1180
Bsp1720I	GCTNAGC	1 cut(s)	867
BspACI	CCGC	3 cut(s)	476, 871, 1282
BspANI	GGCC	3 cut(s)	398, 875, 1222
BspCNI	CTCAG	5 cut(s)	385, 406, 624, 685, 859
BspFNI	CGCG	1 cut(s)	535
BspLI	GGNNCC	4 cut(s)	307, 603, 1050, 1057
BspMAI	CTGCAG	1 cut(s)	751
BspOI	GCTAGC	1 cut(s)	119
BspPI	GGATC	6 cut(s)	48, 84, 116, 499, 1043, 1056
BsrBI	CCGCTC	1 cut(s)	871
BsrFI	RCCGGY	1 cut(s)	543
BsrI	ACTGG	3 cut(s)	399, 957, 1135
BssAI	RCCGGY	1 cut(s)	543
BssECI	CCNNGG	1 cut(s)	237
BssMI	GATC	9 cut(s)	40, 76, 121, 220, 491, 736, 1048, 1165, 1180
Bst2UI	CCWGG	1 cut(s)	1053
Bst4CI	ACNGT	3 cut(s)	110, 763, 1004
BstBAI	YACGTR	1 cut(s)	525
BstC8I	GCNNGC	2 cut(s)	117, 873
BstDEI	CTNAG	7 cut(s)	372, 393, 441, 632, 693, 867, 1120
BstF5I	GGATG	2 cut(s)	247, 667
BstFNI	CGCG	1 cut(s)	535
BstHHI	GCGC	2 cut(s)	535, 918
BstKTI	GATC	9 cut(s)	43, 79, 124, 223, 494, 739, 1051, 1168, 1183
BstMAI	GTCTC	5 cut(s)	106, 123, 715, 735, 1184
BstMBI	GATC	9 cut(s)	40, 76, 121, 220, 491, 736, 1048, 1165, 1180
BstMWI	GCNNNNNNNGC	5 cut(s)	482, 514, 698, 707, 872
BstNI	CCWGG	1 cut(s)	1053
BstNSI	RCATGY	2 cut(s)	266, 1148
BstSCI	CCNGG	2 cut(s)	237, 1051
BstSFI	CTRYAG	3 cut(s)	200, 297, 747
BstUI	CGCG	1 cut(s)	535
BstV1I	GCAGC	7 cut(s)	240, 243, 469, 710, 713, 761, 1153
BstX2I	RGATCY	4 cut(s)	40, 220, 1048, 1165
BstYI	RGATCY	4 cut(s)	40, 220, 1048, 1165
BsuRI	GGCC	3 cut(s)	398, 875, 1222
BtsCI	GGATG	2 cut(s)	247, 667
BtsIMutI	CAGTG	3 cut(s)	23, 406, 768
Cac8I	GCNNGC	2 cut(s)	117, 873
CaiI	CAGNNNCTG	2 cut(s)	692, 704
CfoI	GCGC	2 cut(s)	535, 918
Cfr10I	RCCGGY	1 cut(s)	543
Cfr13I	GGNCC	4 cut(s)	411, 602, 873, 1220
CseI	GACGC	2 cut(s)	140, 524
Csp6I	GTAC	3 cut(s)	344, 756, 923
CspCI	CAANNNNNGTGG	2 cut(s)	598, 633
CviAII	CATG	4 cut(s)	263, 519, 567, 1145
CviQI	GTAC	3 cut(s)	344, 756, 923
DdeI	CTNAG	7 cut(s)	372, 393, 441, 632, 693, 867, 1120
DpnI	GATC	9 cut(s)	42, 78, 123, 222, 493, 738, 1050, 1167, 1182
DpnII	GATC	9 cut(s)	40, 76, 121, 220, 491, 736, 1048, 1165, 1180
Ecl136II	GAGCTC	1 cut(s)	623
Eco24I	GRGCYC	2 cut(s)	625, 1103
Eco47I	GGWCC	2 cut(s)	411, 602
Eco53kI	GAGCTC	1 cut(s)	623
Eco57I	CTGAAG	1 cut(s)	726
Eco72I	CACGTG	1 cut(s)	525
Eco88I	CYCGRG	1 cut(s)	253
EcoICRI	GAGCTC	1 cut(s)	623
EcoO109I	RGGNCCY	2 cut(s)	602, 1220
EcoRII	CCWGG	1 cut(s)	1051
EcoT22I	ATGCAT	1 cut(s)	268
EcoT38I	GRGCYC	2 cut(s)	625, 1103
Esp3I	CGTCTC	1 cut(s)	123
FaeI	CATG	4 cut(s)	266, 522, 570, 1148
FalI	AAGNNNNNCTT	2 cut(s)	129, 161
FaqI	GGGAC	1 cut(s)	615
FatI	CATG	4 cut(s)	262, 518, 566, 1144
FauI	CCCGC	1 cut(s)	864
FauNDI	CATATG	1 cut(s)	268
Fnu4HI	GCNGC	7 cut(s)	229, 232, 483, 699, 702, 750, 1142
FokI	GGATG	2 cut(s)	254, 674
FriOI	GRGCYC	2 cut(s)	625, 1103
Fsp4HI	GCNGC	7 cut(s)	229, 232, 483, 699, 702, 750, 1142
FspBI	CTAG	7 cut(s)	23, 98, 116, 348, 366, 983, 1020
GlaI	GCGC	2 cut(s)	534, 917
GluI	GCNGC	7 cut(s)	229, 232, 483, 699, 702, 750, 1142
GsuI	CTGGAG	1 cut(s)	1042
HaeIII	GGCC	3 cut(s)	398, 875, 1222
HapII	CCGG	3 cut(s)	239, 389, 544
HgaI	GACGC	2 cut(s)	140, 524
HhaI	GCGC	2 cut(s)	535, 918
Hin1II	CATG	4 cut(s)	266, 522, 570, 1148
Hin6I	GCGC	2 cut(s)	533, 916
HinP1I	GCGC	2 cut(s)	533, 916
HincII	GTYRAC	1 cut(s)	1150
HindII	GTYRAC	1 cut(s)	1150
HindIII	AAGCTT	3 cut(s)	360, 708, 964
HinfI	GANTC	6 cut(s)	59, 404, 723, 743, 956, 1015
HpaII	CCGG	3 cut(s)	239, 389, 544
Hpy166II	GTNNAC	4 cut(s)	260, 587, 1000, 1150
Hpy188I	TCNGA	4 cut(s)	220, 688, 949, 961
Hpy188III	TCNNGA	6 cut(s)	80, 356, 659, 740, 1059, 1178
Hpy8I	GTNNAC	4 cut(s)	260, 587, 1000, 1150
Hpy99I	CGWCG	1 cut(s)	540
HpyAV	CCTTC	5 cut(s)	22, 445, 632, 1081, 1233
HpyCH4III	ACNGT	3 cut(s)	110, 763, 1004
HpyCH4IV	ACGT	1 cut(s)	524
HpyCH4V	TGCA	9 cut(s)	228, 266, 425, 522, 609, 716, 749, 1033, 1141
HpyF10VI	GCNNNNNNNGC	5 cut(s)	482, 514, 698, 707, 872
HpyF3I	CTNAG	7 cut(s)	372, 393, 441, 632, 693, 867, 1120
HpySE526I	ACGT	1 cut(s)	524
Hsp92II	CATG	4 cut(s)	266, 522, 570, 1148
HspAI	GCGC	2 cut(s)	533, 916
Kzo9I	GATC	9 cut(s)	40, 76, 121, 220, 491, 736, 1048, 1165, 1180
LmnI	GCTCC	4 cut(s)	620, 642, 850, 1061
Lsp1109I	GCAGC	7 cut(s)	240, 243, 469, 710, 713, 761, 1153
LweI	GCATC	1 cut(s)	679
MaeI	CTAG	7 cut(s)	23, 98, 116, 348, 366, 983, 1020
MaeII	ACGT	1 cut(s)	524
MaeIII	GTNAC	2 cut(s)	779, 895
MalI	GATC	9 cut(s)	42, 78, 123, 222, 493, 738, 1050, 1167, 1182
MbiI	CCGCTC	1 cut(s)	871
MboI	GATC	9 cut(s)	40, 76, 121, 220, 491, 736, 1048, 1165, 1180
MboII	GAAGA	6 cut(s)	64, 457, 460, 586, 872, 947
MfeI	CAATTG	2 cut(s)	495, 556
MflI	RGATCY	4 cut(s)	40, 220, 1048, 1165
MhlI	GDGCHC	3 cut(s)	625, 647, 1103
MluCI	AATT	7 cut(s)	436, 495, 556, 610, 792, 855, 1207
MlyI	GAGTC	3 cut(s)	413, 717, 737
MmeI	TCCRAC	1 cut(s)	1167
Mph1103I	ATGCAT	1 cut(s)	268
MroXI	GAANNNNTTC	1 cut(s)	1267
MseI	TTAA	5 cut(s)	153, 273, 968, 1008, 1026
MslI	CAYNNNNRTG	3 cut(s)	267, 523, 677
MspA1I	CMGCKG	2 cut(s)	704, 807
MspI	CCGG	3 cut(s)	239, 389, 544
MspR9I	CCNGG	2 cut(s)	239, 1053
MunI	CAATTG	2 cut(s)	495, 556
MvaI	CCWGG	1 cut(s)	1053
MvnI	CGCG	1 cut(s)	535
MwoI	GCNNNNNNNGC	5 cut(s)	482, 514, 698, 707, 872
NciI	CCSGG	1 cut(s)	239
NdeI	CATATG	1 cut(s)	268
NdeII	GATC	9 cut(s)	40, 76, 121, 220, 491, 736, 1048, 1165, 1180
NheI	GCTAGC	1 cut(s)	115
NlaIII	CATG	4 cut(s)	266, 522, 570, 1148
NlaIV	GGNNCC	4 cut(s)	307, 603, 1050, 1057
NmuCI	GTSAC	2 cut(s)	779, 895
NsiI	ATGCAT	1 cut(s)	268
NspI	RCATGY	2 cut(s)	266, 1148
OliI	CACNNNNGTG	1 cut(s)	677
PaeR7I	CTCGAG	1 cut(s)	253
PdmI	GAANNNNTTC	1 cut(s)	1267
PfeI	GAWTC	3 cut(s)	59, 956, 1015
PflMI	CCANNNNNTGG	1 cut(s)	55
PkrI	GCNGC	7 cut(s)	230, 233, 484, 700, 703, 751, 1143
PleI	GAGTC	3 cut(s)	412, 717, 737
PmaCI	CACGTG	1 cut(s)	525
PmlI	CACGTG	1 cut(s)	525
PpsI	GAGTC	3 cut(s)	412, 717, 737
Ppu21I	YACGTR	1 cut(s)	525
PpuMI	RGGWCCY	1 cut(s)	602
Psp124BI	GAGCTC	1 cut(s)	625
Psp5II	RGGWCCY	1 cut(s)	602
Psp6I	CCWGG	1 cut(s)	1051
PspCI	CACGTG	1 cut(s)	525
PspGI	CCWGG	1 cut(s)	1051
PspN4I	GGNNCC	4 cut(s)	307, 603, 1050, 1057
PspPI	GGNCC	4 cut(s)	411, 602, 873, 1220
PspPPI	RGGWCCY	1 cut(s)	602
PspXI	VCTCGAGB	1 cut(s)	253
PstI	CTGCAG	1 cut(s)	751
PstNI	CAGNNNCTG	2 cut(s)	692, 704
PsuI	RGATCY	4 cut(s)	40, 220, 1048, 1165
PvuII	CAGCTG	2 cut(s)	704, 807
RsaI	GTAC	3 cut(s)	345, 757, 924
RsaNI	GTAC	3 cut(s)	344, 756, 923
RseI	CAYNNNNRTG	3 cut(s)	267, 523, 677
SacI	GAGCTC	1 cut(s)	625
SaqAI	TTAA	5 cut(s)	153, 273, 968, 1008, 1026
SatI	GCNGC	7 cut(s)	229, 232, 483, 699, 702, 750, 1142
Sau3AI	GATC	9 cut(s)	40, 76, 121, 220, 491, 736, 1048, 1165, 1180
Sau96I	GGNCC	4 cut(s)	411, 602, 873, 1220
SchI	GAGTC	3 cut(s)	413, 717, 737
ScrFI	CCNGG	2 cut(s)	239, 1053
SduI	GDGCHC	3 cut(s)	625, 647, 1103
SfaNI	GCATC	1 cut(s)	679
SfcI	CTRYAG	3 cut(s)	200, 297, 747
Sfr274I	CTCGAG	1 cut(s)	253
SinI	GGWCC	2 cut(s)	411, 602
SlaI	CTCGAG	1 cut(s)	253
SmiMI	CAYNNNNRTG	3 cut(s)	267, 523, 677
SmlI	CTYRAG	2 cut(s)	253, 1215
SmoI	CTYRAG	2 cut(s)	253, 1215
Sse9I	AATT	7 cut(s)	436, 495, 556, 610, 792, 855, 1207
SsiI	CCGC	3 cut(s)	476, 871, 1282
SspMI	CTAG	7 cut(s)	23, 98, 116, 348, 366, 983, 1020
SstI	GAGCTC	1 cut(s)	625
StyD4I	CCNGG	2 cut(s)	237, 1051
TaaI	ACNGT	3 cut(s)	110, 763, 1004
TaiI	ACGT	1 cut(s)	527
TaqI	TCGA	3 cut(s)	254, 284, 739
TasI	AATT	7 cut(s)	436, 495, 556, 610, 792, 855, 1207
TfiI	GAWTC	3 cut(s)	59, 956, 1015
Tru1I	TTAA	5 cut(s)	153, 273, 968, 1008, 1026
Tru9I	TTAA	5 cut(s)	153, 273, 968, 1008, 1026
TscAI	CASTG	3 cut(s)	23, 406, 768
TseFI	GTSAC	2 cut(s)	779, 895
TseI	GCWGC	7 cut(s)	228, 231, 482, 698, 701, 749, 1141
Tsp45I	GTSAC	2 cut(s)	779, 895
TspDTI	ATGAA	5 cut(s)	948, 954, 1002, 1175, 1218
TspRI	CASTG	3 cut(s)	23, 406, 768
Van91I	CCANNNNNTGG	1 cut(s)	55
VpaK11BI	GGWCC	2 cut(s)	411, 602
XapI	RAATTY	1 cut(s)	1207
XceI	RCATGY	2 cut(s)	266, 1148
XhoI	CTCGAG	1 cut(s)	253
XmnI	GAANNNNTTC	1 cut(s)	1267
XspI	CTAG	7 cut(s)	23, 98, 116, 348, 366, 983, 1020
Zsp2I	ATGCAT	1 cut(s)	268

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.